Monitoring metabolic pathway alterations in Escherichia coli due to applied potentials in microbial electrochemical system

Microbiome regulation for sustainable wastewater treatment

Sustainable wastewater treatment is essential for attaining clean water and sanitation, aligning with UN Sustainable Development Goals. Wastewater treatment plants (WWTPs) have utilized environmental microbiomes in biological treatment processes in this effort for over a century. However, the inherent complexity and redundancy of microbial communities, and emerging chemical and biological contaminants, challenge the biotechnology applications. Over the past decades, understanding and utilization of microbial energy metabolism and interaction relationships have revolutionized the biological system. In this review, we discuss how microbiome regulation strategies are being used to generate actionable performance for low-carbon pollutant removal and resource recovery in WWTPs. The engineering application cases also highlight the real feasibility and promising prospects of the microbiome regulation approaches. In conclusion, we recommend identifying environmental risks associated with chemical and biological contaminants transformation as a prerequisite. We propose the integration of gene editing and enzyme design to precisely regulate microbiomes for the synergistic control of both chemical and biological risks. Additionally, the development of integrated technologies and engineering equipment is crucial in addressing the ongoing water crisis. This review advocates for the innovation of conventional wastewater treatment biotechnology to ensure sustainable wastewater treatment.

Microbial electrosynthesis: opportunities for microbial pure cultures

Microbial electrosynthesis (MES) is an emerging technology that couples renewable electricity to microbial production processes. Although advances in MES performance have been driven largely by microbial mixed cultures, we see a great limitation in the diversity, and hence value, of products that can be achieved in undefined mixed cultures. By contrast, metabolic control of pure cultures and genetic engineering could greatly expand the scope of MES, and even of broader electrobiotechnology, to include targeted high-value products. To leverage this potential, we advocate for more efforts and activities to develop engineered electroactive microbes for synthesis, and we highlight the need for a standardized electrobioreactor infrastructure that allows the establishment and engineering of electrobioprocesses with these novel biocatalysts.

In situ self-induced electrical stimulation to plants: Modulates morphogenesis, photosynthesis and gene expression in Vigna radiata and Cicer arietinum

Specific stimuli to plants influence intracellular and intercellular communications, activation of ion channels, gene expression, growth and development. The functional role of self-induced in situ electrical stimuli at the rhizosphere of the plant by placing electrode assembly in a defined circuit mode was studied on the growth and development of Vigna radiata and Cicer arietinum plants. Experiments were designed with three-circuit mode configurational variations (CC-P, OC-P and SC-P) and compared with the relative performance of control system (non-potential). The plants cultivated under the in situ electrical stimuli (low-current) showed a marked influence on growth and photosynthetic performance of the plants. CC-P operation showed improved vegetative growth, characterized by increased roots, shoots and biomass along with accelerated plant growth from seed germination to vegetation, flowering and pod formation leading towards earlier and more robust flowering compared to control system. Plants also showed higher aquaporin gene expression levels in CC-P operation. The control operation showed 10 days additional maturation time compared to CC-P operation. The strategy can be beneficially applied to augment the bioremediation capacity of complex pollutants with reference to phytoremediation or constructed wetland systems where the plant and its roots are the main enabler apart from agriculture applications specific to nursery-raised or transplanted plants.

Production of acetone, butanol, and ethanol by electro-fermentation with Clostridium saccharoperbutylacetonicum N1-4

This manuscript describes the effect of altering the extracellular redox potential during the production of acetone, butanol, and ethanol on a dual chamber H-type microbial fuel cell by fermenting glucose with Clostridium saccharoperbutylacetonicum N1-4. Extracellular redox potential modification was achieved by either supplementing the microbial broth with the redox agent NADH or by poising the cathode potential at -600 mV vs. Ag/AgCl. The addition of NADH was found to foment the production of acetone via fermentation of glucose. The addition of 200 mM of NADH to the catholyte rendered the highest production of acetone (2.4 g L^-1), thus outperforming the production of acetone by conventional fermentation means (control treatment) by a factor of 2.2. The experimental evidence gathered here, indicates that cathodic electro-fermentation of glucose favors the production of butanol. When poising the cathode potential at -600 mV vs Ag/AgCl (electro-fermentation), the largest production of butanol was achieved (5.8 g L^-1), outperforming the control treatment by a factor of 1.5. The production of ABE solvents and the electrochemical measurements demonstrate the electroactive properties of C. saccharoperbutylacetonicum N1-4 and illustrates the usefulness of bio-electrochemical systems to improve conventional fermentative processes.

Wastewater-derived biohydrogen: Critical analysis of related enzymatic processes at the research and large scales

Organic-rich wastewater is a feasible feedstock for biohydrogen production. Numerous review on the performance of microorganisms and the diversity of their communities during a biohydrogen process were published. However, there is still no in-depth overview of enzymes for biohydrogen production from wastewater and their scale-up applications. This review aims at providing an insightful exploration of critical discussion in terms of: (i) the roles and applications of enzymes in wastewater-based biohydrogen fermentation; (ii) systematical introduction to the enzymatic processes of photo fermentation and dark fermentation; (iii) parameters that affect enzymatic performances and measures for enzyme activity/ability enhancement; (iv) biohydrogen production bioreactors; as well as (v) enzymatic biohydrogen production systems and their larger scales application. Furthermore, to assess the best applications of enzymes in biohydrogen production from wastewater, existing problems and feasible future studies on the development of low-cost enzyme production methods and immobilized enzymes, the construction of multiple enzyme cooperation systems, the study of biohydrogen production mechanisms, more effective bioreactor exploration, larger scales enzymatic biohydrogen production, and the enhancement of enzyme activity or ability are also addressed.

Recent advances in electro-fermentation technology: A novel approach towards balanced fermentation

Biotransformation of organic substrates via acidogenic fermentation (AF) to high-value products such as C1-C6 carboxylic acids and alcohol serves as platform chemicals for various industrial applications. However, the AF technology suffers from low product titers due to thermodynamic constraints. Recent studies suggest that augmenting AF redox potential can regulate the metabolic pathway and provide seamless electron flow by lowering the activation energy barrier, thus positively influencing the substrate utilization rate, product yield, and speciation. Hence, the augmented AF system with an exogenous electricity supply is termed as electro-fermentation (EF), which has enormous potential to strengthen the fermentation technology domain. Therefore, this critical review systematically discusses the current understanding of EF with a special focus on the extracellular electron transfer mechanism of electroactive bacteria and provides perspectives and research gaps to further improve the technology for green chemical synthesis, sustainable waste management, and circular bio-economy.

Magnetite-Bacillus subtilis synergy on the metabolic selection of products in electrofermentation system

The study examines the role of magnetite (1-150 mg/L) at the interface of Bacillus subtilis-electrode under poised-condition (-0.2 V) for product-formation and catalytic-conduct with the relative-gene-expression encoding lactate dehydrogenase (lctE), pyruvate dehydrogenase (pdhA), acetate kinase (ackA), pyruvate carboxylase (pycA), and NADH dehydrogenase (ndh). The magnetite load of 25 mg/L showed positive influence on acidogenesis resulting in H₂ production of 264.7 mol/mL and fatty acids synthesis of 3.6 g/L. Additionally, this condition showed higher succinic acid productivity (2.8 g/L) which correlates with the upregulated pycA gene and fumarate to succinate redox peak. With 10 mg/L loading, production of higher acetic acid (3.1 g/L) along with H₂ (181.6 mol/mL) was depicted wherein upregulation of pdhA, ackA and ndh genes was observed. In absence of magnetite, lctE gene was upregulated which resulted higher lactate production. The findings suggest that the mutual-interactions between magnetite-active sites of specific enzymes enhances the biocatalytic activity triggering product-formation.

Electro-fermentation: Sustainable bioproductions steered by electricity

The market of biobased products obtainable via fermentation processes is steadily increasing over the past few years, driven by the need to create a decarbonized economy. To date, industrial fermentation (IF) employs either pure or mixed microbial cultures (MMC) whereby the type of the microbial catalysts and the used feedstock affect metabolic pathways and, in turn, the type of product(s) generated. In many cases, especially when dealing with MMC, the economic viability of IF is hindered by factors such as the low attained product titer and selectivity, which ultimately challenge the downstream recovery and purification steps. In this context, electro-fermentation (EF) represents an innovative approach, based on the use of a polarized electrode interface to trigger changes in the rate, yield, titer or product distribution deriving from traditional fermentation processes. In principle, the electrode in EF can act as an electron acceptor (i.e., anodic electro-fermentation, AEF) or donor (i.e., cathodic electro-fermentation, CEF), or simply as a mean to control the oxidation-reduction potential of the fermentation broth. However, the molecular and biochemical basis underlying the EF process are still largely unknown. This review paper provides a comprehensive overview of recent literature studies including both AEF and CEF examples with either pure or mixed microbial cultures. A critical analysis of biochemical, microbiological, and engineering aspects which presently hamper the transition of the EF technology from the laboratory to the market is also presented.

Regulation and augmentation of anaerobic digestion processes via the use of bioelectrochemical systems

Anaerobic digestion (AD) is a biological process that can be used to treat a wide range of carbon-rich wastes and producerenewable, green energy. To maximize energy recovery from various resources while controlling inhibitory chemicals, notwithstanding AD's efficiency, many limitations must be addressed. As a result, bioelectrochemical systems (BESs) have emerged as a hybrid technology, extensively studied to remediate AD inhibitory chemicals, increase AD operating efficacy, and make the process economically viable via integration approaches. Biogas and residual intermediatory metabolites such as volatile fatty acids are upgraded to value-added chemicals and fuels with the help of the BES as a pre-treatment step, within AD or after the AD process. It may also be used directly to generate power. To overcome the constraints of AD in lab-scale applications, this article summarizes BES technology and operations and endorses ways to scale up BES-AD systems in the future.

Metabolic flux of Bacillus subtilis under poised potential in electrofermentation system: Gene expression vs product formation

The role of poised (negative/positive) potential (0.2/0.4/0.6/0.8 V vs Ag/AgCl at anode) was studied in electrofermentation system (EF) to understand the metabolic flux of Bacillus subtilis with pyruvate as a carbon source. The relative expression of genes encoding pyruvate dehydrogenase (pdhA), lactate dehydrogenase (lctE), acetate kinase (ackA), pyruvate carboxylase (pycA), adenylosuccinate lyase (purB), acylCoA dehydrogenase (acdA) and NADH dehydrogenase (ndh) allowed evaluation of metabolic changes in correlation to product formation and bioelectrochemical analysis. In comparison to control, poised circumstances showed marked influence on product profile with up-regulation of key enzymes involved in pyruvate metabolism. EF poised with - 0.8 V and -0.6 V enhanced bio-hydrogen production by 6 folds and 4 folds respectively. Concomitantly, -0.8 V resulted in maximum ethanol and acetic acid production whilst, -0.6 V and + 0.6 V resulted in maximum lactic acid and succinic acid production respectively. The transcripts for genes associated synthesis were upregulated in the respected poised reactors.

Electro-fermentation for biofuels and biochemicals production: Current status and future directions

Electro-fermentation is an emerging bioporcess that could regulate the metabolism of electrochemically active microorganisms. The provision of electrodes for the fermentation process that functions as an electron acceptor and supports the formation and transportation of electrons and protons, consequently producing bioelectricity and value-added chemicals. The traditional method of fermentation has several limitations in usability and economic feasibility. Subsequently, a series of metabolic processes occurring in conventional fermentation processes are most often redox misaligned. In this regard, electro-fermentation emerged as a hybrid technology which can regulate a series of metabolic processes occurring in a bioreactor by regulating the redox instabilities and boosting the overall metabolic process towards high biomass yield and enhanced product formation. The present article deals with microorganisms-electrode interactions, various types of electro-fermentation systems, comparative evaluation of pure and mixed culture electro-fermentation application, and value-added fuels and chemical synthesis.

Molecular mechanism of ethanol-H2 co-production fermentation in anaerobic acidogenesis: Challenges and perspectives

Ethanol-type fermentation (ETF) is one of three fermentation types during the acidogenesis of the anaerobic biological treatment. Ethanoligenens, a representative genus of ETF, displays acidophilic, autoaggregative, and ethanol-H₂ co-producing characteristics and facilitates subsequent methanogenesis. Here, the latest advances in the molecular mechanisms of the metabolic regulation of ethanol-H₂ co-producing bacteria based on multi-omics studies were comprehensively reviewed. Comparative genomics demonstrated a low genetic similarity between Ethanoligenens and other hydrogen-producing genera. FeFe‑hydrogenases (FeFe-H₂ases) and pyruvate ferredoxin oxidoreductase (PFOR) played critical roles in the ethanol-H₂ co-metabolic pathway of Ethanoligenens. Global transcriptome analysis revealed that highly expressed [FeFe]-H₂ases and ferredoxins drove hydrogen production by Ethanoligenens at low pH conditions (4.0-4.5). Quantitative proteomic analysis also proved that this genus resists acetic acid-induced intracellular acidification through the up-regulated expression of pyrimidine metabolism related proteins. The autoaggregation of Ethanoligenen facilitated its granulation with acetate-oxidizing bacteria in co-culture systems and mitigated a fast pH drop, providing a new approach for solving a pH imbalance and improving hydrogen production. In-depth studies of the regulatory mechanism underlying ethanol-H₂ co-production metabolism and the syntrophic interactions of ethanol-H₂ co-producing Ethanoligenens with other microorganisms will provide insights into the improvement of bioenergy recovery in anaerobic biotechnology. The coupling of ETF with other biotechnologies, which based on the regulation of electron flow direction, syntrophic interaction, and metabolic flux, can be potential strategies to enhance the cascade recovery of energy and resources.

Synergy of anoxic microenvironment and facultative anaerobes on acidogenic metabolism in a self-induced electrofermentation system

Metabolic potential of two different cultures, facultative (FB) and strict anaerobes (AB) under two microenvironments [anoxic (ANOX) and anaerobic (ANA)] was evaluated to understand acidogenic fermentation in a self-induced electrofermentation (EF) system for the production of short-chain fatty acids (SCFA: C2-C4) and biogas. ANA condition positively influenced FB and AB metabolism towards higher acetic (C2:2390 mg/L) and propionic acid (C3: 717 mg/L) production, while butyric acid (C4:1481 mg/L) favored ANOX microenvironment (AB). ANOX microenvironment showed a better self-induced potential compared to ANA metabolism (0.46 V (FB_ANOX); 0.45 V (AB_ANOX)). An improved H₂ (>30%) fraction was noticed with FB while CH₄ production was found favourable with AB. The study illustrated the role of system microenvironment in association with metabolic function towards regulating electrofermentation towards specific products synthesis.