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Liyanagedera ND, Bareham CA, Kempton H, Guesgen HW. Novel machine learning-driven comparative analysis of CSP, STFT, and CSP-STFT fusion for EEG data classification across multiple meditation and non-meditation sessions in BCI pipeline. Brain Inform 2025; 12:4. [PMID: 39921681 PMCID: PMC11807047 DOI: 10.1186/s40708-025-00251-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2024] [Accepted: 01/24/2025] [Indexed: 02/10/2025] Open
Abstract
This study focuses on classifying multiple sessions of loving kindness meditation (LKM) and non-meditation electroencephalography (EEG) data. This novel study focuses on using multiple sessions of EEG data from a single individual to train a machine learning pipeline, and then using a new session data from the same individual for the classification. Here, two meditation techniques, LKM-Self and LKM-Others were compared with non-meditation EEG data for 12 participants. Among many tested, three BCI pipelines we built produced promising results, successfully detecting features in meditation/ non-meditation EEG data. While testing different feature extraction algorithms, a common neural network structure was used as the classification algorithm to compare the performance of the feature extraction algorithms. For two of those pipelines, Common Spatial Patterns (CSP) and Short Time Fourier Transform (STFT) were successfully used as feature extraction algorithms where both these algorithms are significantly new for meditation EEG. As a novel concept, the third BCI pipeline used a feature extraction algorithm that fused the features of CSP and STFT, achieving the highest classification accuracies among all tested pipelines. Analyses were conducted using EEG data of 3, 4 or 5 sessions, totaling 3960 tests on the entire dataset. At the end of the study, when considering all the tests, the overall classification accuracy using SCP alone was 67.1%, and it was 67.8% for STFT alone. The algorithm combining the features of CSP and STFT achieved an overall classification accuracy of 72.9% which is more than 5% higher than the other two pipelines. At the same time, the highest mean classification accuracy for the 12 participants was achieved using the pipeline with the combination of CSP STFT algorithm, reaching 75.5% for LKM-Self/ non-meditation for the case of 5 sessions of data. Additionally, the highest individual classification accuracy of 88.9% was obtained by the participant no. 14. Furthermore, the results showed that the classification accuracies for all three pipelines increased with the number of training sessions increased from 2 to 3 and then to 4. The study was successful in classifying a new session of EEG meditation/ non-meditation data after training machine learning algorithms using a different set of session data, and this achievement will be beneficial in the development of algorithms that support meditation.
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Affiliation(s)
- Nalinda D Liyanagedera
- School of Mathematical and Computational Sciences, Massey University, Palmerston North, 4410, New Zealand.
- Department of Computing & Information Systems, Faculty of Applied Sciences, Wayamba University of Sri Lanka, Kuliyapitiya, Sri Lanka.
| | - Corinne A Bareham
- School of Psychology, Massey University, Palmerston North, 4410, New Zealand
| | - Heather Kempton
- School of Psychology, Massey University, Auckland, 0632, New Zealand
| | - Hans W Guesgen
- School of Mathematical and Computational Sciences, Massey University, Palmerston North, 4410, New Zealand
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2
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Yamaçli V. State-of-health estimation and classification of series-connected batteries by using deep learning based hybrid decision approach. Heliyon 2024; 10:e39121. [PMID: 39640714 PMCID: PMC11620055 DOI: 10.1016/j.heliyon.2024.e39121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Revised: 09/16/2024] [Accepted: 10/08/2024] [Indexed: 12/07/2024] Open
Abstract
In rechargeable battery control and operation, one of the primary obstacles is safety concerns where the battery degradation poses a significant factor. Therefore, in recent years, state-of-health assessment of lithium-ion batteries has become a noteworthy issue. On the other hand, it is challenging to ensure robustness and generalization because most state-of-health assessment techniques are implemented for a specific characteristic, operating situation, and battery material system. In most studies, health status of single cell batteries is assessed by using analytical or computer-aided deep learning methods. But, the state-of-health characteristics of series-connected battery systems should be also focused with advances of technology and usage, especially electric vehicles. This study presents a data-driven, deep learning-based hybrid decision approach for predicting the state-of-health of series-connected lithium-ion batteries with different characteristics. The paper consists of generating series-connected battery degradation dataset by using of some mostly used datasets. Also, by employing deep learning-based networks along with hybrid-classification aided by performance metrics, it is shown that estimating and predicting the state-of-health can be achieved not only by using sole deep-learning algorithms but also hybrid-classification techniques. The results demonstrate the high accuracy and simplicity of the proposed novel approach on datasets from Oxford University and Calce battery group. The best estimated mean squared error, root mean square error and mean-absolute percentage error values are not more than 0.0500, 0.2236 and 0.7065, respectively which shows the efficiency not only by accuracy but also error indicators. The results show that the proposed approach can be implemented in offline or online systems with best average accuracy of 98.33 % and classification time of 58 ms per sample.
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Affiliation(s)
- Volkan Yamaçli
- Computer Engineering Department, Faculty of Engineering, Mersin University, P.O. Box 33100, Mersin, Turkey
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3
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Liu R, Zayed T, Xiao R. Acoustic leak localization for water distribution network through time-delay-based deep learning approach. WATER RESEARCH 2024; 268:122600. [PMID: 39413711 DOI: 10.1016/j.watres.2024.122600] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Revised: 09/10/2024] [Accepted: 10/07/2024] [Indexed: 10/18/2024]
Abstract
Water leakage within water distribution networks (WDNs) presents significant challenges, encompassing infrastructure damage, economic losses, and public health risks. Traditional methods for leak localization based on acoustic signals encounter inherent limitations due to environmental noise and signal distortions. In response to this crucial issue, this study introduces an innovative approach that utilizes deep learning-based techniques to estimate time delay for leak localization. The research findings reveal that while the Res1D-CNN model demonstrates inferior performance compared to the GCC-SCOT and BCC under high signal-to-noise ratio (SNR) conditions, it exhibits robust capabilities and higher accuracy in low SNR scenarios. The proposed method's efficacy was empirically validated through field measurements. This advancement in acoustic leak localization holds the potential to significantly improve fault diagnosis and maintenance systems, thereby enabling efficient management of WDNs.
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Affiliation(s)
- Rongsheng Liu
- Department of Building and Real Estate, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong
| | - Tarek Zayed
- Department of Building and Real Estate, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong
| | - Rui Xiao
- Department of Building and Real Estate, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong; Department of Civil Engineering, McGill University, Montreal, QC H3A 0C3, Canada.
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4
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Ahmad I, Zhu M, Li G, Javeed D, Kumar P, Chen S. A Secure and Interpretable AI for Smart Healthcare System: A Case Study on Epilepsy Diagnosis Using EEG Signals. IEEE J Biomed Health Inform 2024; 28:3236-3247. [PMID: 38507373 DOI: 10.1109/jbhi.2024.3366341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2024]
Abstract
The efficient patient-independent and interpretable framework for electroencephalogram (EEG) epileptic seizure detection (ESD) has informative challenges due to the complex pattern of EEG nature. Automated detection of ES is crucial, while Explainable Artificial Intelligence (XAI) is urgently needed to justify the model detection of epileptic seizures in clinical applications. Therefore, this study implements an XAI-based computer-aided ES detection system (XAI-CAESDs), comprising three major modules, including of feature engineering module, a seizure detection module, and an explainable decision-making process module in a smart healthcare system. To ensure the privacy and security of biomedical EEG data, the blockchain is employed. Initially, the Butterworth filter eliminates various artifacts, and the Dual-Tree Complex Wavelet Transform (DTCWT) decomposes EEG signals, extracting real and imaginary eigenvalue features using frequency domain (FD), time domain (TD) linear feature, and Fractal Dimension (FD) of non-linear features. The best features are selected by using Correlation Coefficients (CC) and Distance Correlation (DC). The selected features are fed into the Stacking Ensemble Classifiers (SEC) for EEG ES detection. Further, the Shapley Additive Explanations (SHAP) method of XAI is implemented to facilitate the interpretation of predictions made by the proposed approach, enabling medical experts to make accurate and understandable decisions. The proposed Stacking Ensemble Classifiers (SEC) in XAI-CAESDs have demonstrated 2% best average accuracy, recall, specificity, and F1-score using the University of California, Irvine, Bonn University, and Boston Children's Hospital-MIT EEG data sets. The proposed framework enhances decision-making and the diagnosis process using biomedical EEG signals and ensures data security in smart healthcare systems.
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Dong X, Wen Y, Ji D, Yuan S, Liu Z, Shang W, Zhou W. Epileptic Seizure Detection with an End-to-End Temporal Convolutional Network and Bidirectional Long Short-Term Memory Model. Int J Neural Syst 2024; 34:2450012. [PMID: 38230571 DOI: 10.1142/s0129065724500126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2024]
Abstract
Automatic seizure detection plays a key role in assisting clinicians for rapid diagnosis and treatment of epilepsy. In view of the parallelism of temporal convolutional network (TCN) and the capability of bidirectional long short-term memory (BiLSTM) in mining the long-range dependency of multi-channel time-series, we propose an automatic seizure detection method with a novel end-to-end TCN-BiLSTM model in this work. First, raw EEG is filtered with a 0.5-45 Hz band-pass filter, and the filtered data are input into the proposed TCN-BiLSTM network for feature extraction and classification. Post-processing process including moving average filtering, thresholding and collar technique is then employed to further improve the detection performance. The method was evaluated on two EEG database. On the CHB-MIT scalp EEG database, our method achieved a segment-based sensitivity of 94.31%, specificity of 97.13%, and accuracy of 97.09%. Meanwhile, an event-based sensitivity of 96.48% and an average false detection rate (FDR) of 0.38/h were obtained. On the SH-SDU database we collected, the segment-based sensitivity of 94.99%, specificity of 93.25%, and accuracy of 93.27% were achieved. In addition, an event-based sensitivity of 99.35% and a false detection rate of 0.54/h were yielded. The total detection time consumed for 1[Formula: see text]h EEG data was 5.65[Formula: see text]s. These results demonstrate the superiority and promising potential of the proposed method in real-time monitoring of epileptic seizures.
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Affiliation(s)
- Xingchen Dong
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
| | - Yiming Wen
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
| | - Dezan Ji
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
| | - Shasha Yuan
- School of Computer Science, Qufu Normal University, Rizhao 276826, P. R. China
| | - Zhen Liu
- Second Hospital of Shandong University, Jinan 250100, P. R. China
| | - Wei Shang
- Second Hospital of Shandong University, Jinan 250100, P. R. China
| | - Weidong Zhou
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
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6
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Zhang H, Zhou QQ, Chen H, Hu XQ, Li WG, Bai Y, Han JX, Wang Y, Liang ZH, Chen D, Cong FY, Yan JQ, Li XL. The applied principles of EEG analysis methods in neuroscience and clinical neurology. Mil Med Res 2023; 10:67. [PMID: 38115158 PMCID: PMC10729551 DOI: 10.1186/s40779-023-00502-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 11/23/2023] [Indexed: 12/21/2023] Open
Abstract
Electroencephalography (EEG) is a non-invasive measurement method for brain activity. Due to its safety, high resolution, and hypersensitivity to dynamic changes in brain neural signals, EEG has aroused much interest in scientific research and medical fields. This article reviews the types of EEG signals, multiple EEG signal analysis methods, and the application of relevant methods in the neuroscience field and for diagnosing neurological diseases. First, three types of EEG signals, including time-invariant EEG, accurate event-related EEG, and random event-related EEG, are introduced. Second, five main directions for the methods of EEG analysis, including power spectrum analysis, time-frequency analysis, connectivity analysis, source localization methods, and machine learning methods, are described in the main section, along with different sub-methods and effect evaluations for solving the same problem. Finally, the application scenarios of different EEG analysis methods are emphasized, and the advantages and disadvantages of similar methods are distinguished. This article is expected to assist researchers in selecting suitable EEG analysis methods based on their research objectives, provide references for subsequent research, and summarize current issues and prospects for the future.
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Affiliation(s)
- Hao Zhang
- School of Systems Science, Beijing Normal University, Beijing, 100875, China
| | - Qing-Qi Zhou
- College of Electrical and Control Engineering, North China University of Technology, Beijing, 100041, China
| | - He Chen
- School of Automation Science and Engineering, South China University of Technology, Guangzhou, 510641, China
| | - Xiao-Qing Hu
- Department of Psychology, the State Key Laboratory of Brain and Cognitive Sciences, The University of Hong Kong, Hong Kong SAR, 999077, China
- HKU-Shenzhen Institute of Research and Innovation, Shenzhen, 518057, Guangdong, China
| | - Wei-Guang Li
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong SAR, 999077, China
| | - Yang Bai
- Department of Rehabilitation Medicine, the First Affiliated Hospital of Nanchang University, Nanchang, 330006, China
- Rehabilitation Medicine Clinical Research Center of Jiangxi Province, Nanchang, 330006, China
| | - Jun-Xia Han
- Beijing Key Laboratory of Learning and Cognition, School of Psychology, Capital Normal University, Beijing, 100048, China
| | - Yao Wang
- School of Communication Science, Beijing Language and Culture University, Beijing, 100083, China
| | - Zhen-Hu Liang
- Institute of Electrical Engineering, Yanshan University, Qinhuangdao, 066004, Hebei, China.
| | - Dan Chen
- School of Computer Science, Wuhan University, Wuhan, 430072, China.
| | - Feng-Yu Cong
- School of Biomedical Engineering, Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian, 116081, Liaoning, China.
| | - Jia-Qing Yan
- College of Electrical and Control Engineering, North China University of Technology, Beijing, 100041, China.
| | - Xiao-Li Li
- School of Automation Science and Engineering, South China University of Technology, Guangzhou, 510641, China.
- Guangdong Artificial Intelligence and Digital Economy Laboratory (Guangzhou), Guangzhou, 510335, China.
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7
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Zhang Y, Li Q, Rong Y, Hu L, Müller HJ, Wei P. Comparing monetary gain and loss in the monetary incentive delay task: EEG evidence. Psychophysiology 2023; 60:e14383. [PMID: 37427496 DOI: 10.1111/psyp.14383] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2022] [Revised: 04/04/2023] [Accepted: 06/19/2023] [Indexed: 07/11/2023]
Abstract
What is more effective to guide behavior: The desire to gain or the fear to lose? Electroencephalography (EEG) studies have yielded inconsistent answers. In a systematic exploration of the valence and magnitude parameters in monetary gain and loss processing, we used time-domain and time-frequency-domain analyses to uncover the underlying neural processes. A group of 24 participants performed a monetary incentive delay (MID) task in which cue-induced anticipation of a high or low magnitude of gain or loss was manipulated trial-wise. Behaviorally, the anticipation of both gain and loss expedited responses, with gain anticipation producing greater facilitation than loss anticipation. Analyses of cue-locked P2 and P3 components revealed the significant valence main effect and valence × magnitude interaction: amplitude differences between high and low incentive magnitudes were larger with gain vs. loss cues. However, the contingent negative variation component was sensitive to incentive magnitude but did not vary with incentive valence. In the feedback phase, the RewP component exhibited reversed patterns for gain and loss trials. Time-frequency analyses revealed a large increase in delta/theta-ERS oscillatory activity in high- vs. low-magnitude conditions and a large decrease of alpha-ERD oscillatory activity in gain vs. loss conditions in the anticipation stage. In the consumption stage, delta/theta-ERS turned out stronger for negative than positive feedback, especially in the gain condition. Overall, our study provides new evidence for the neural oscillatory features of monetary gain and loss processing in the MID task, suggesting that participants invested more attention under gain and high-magnitude conditions vs. loss and low-magnitude conditions.
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Affiliation(s)
- Yan Zhang
- Beijing Key Laboratory of Learning and Cognition and School of Psychology, Capital Normal University, Beijing, China
| | - Qiuhao Li
- Beijing Key Laboratory of Learning and Cognition and School of Psychology, Capital Normal University, Beijing, China
| | - Yachao Rong
- Beijing Key Laboratory of Learning and Cognition and School of Psychology, Capital Normal University, Beijing, China
| | - Li Hu
- Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing, China
| | - Hermann J Müller
- General & Experimental Psychology, Department of Psychology, LMU München, Munich, Germany
| | - Ping Wei
- Beijing Key Laboratory of Learning and Cognition and School of Psychology, Capital Normal University, Beijing, China
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8
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Wang Z, Hou S, Xiao T, Zhang Y, Lv H, Li J, Zhao S, Zhao Y. Lightweight Seizure Detection Based on Multi-Scale Channel Attention. Int J Neural Syst 2023; 33:2350061. [PMID: 37845193 DOI: 10.1142/s0129065723500612] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2023]
Abstract
Epilepsy is one kind of neurological disease characterized by recurring seizures. Recurrent seizures can cause ongoing negative mental and cognitive damage to the patient. Therefore, timely diagnosis and treatment of epilepsy are crucial for patients. Manual electroencephalography (EEG) signals analysis is time and energy consuming, making automatic detection using EEG signals particularly important. Many deep learning algorithms have thus been proposed to detect seizures. These methods rely on expensive and bulky hardware, which makes them unsuitable for deployment on devices with limited resources due to their high demands on computer resources. In this paper, we propose a novel lightweight neural network for seizure detection using pure convolutions, which is composed of inverted residual structure and multi-scale channel attention mechanism. Compared with other methods, our approach significantly reduces the computational complexity, making it possible to deploy on low-cost portable devices for seizures detection. We conduct experiments on the CHB-MIT dataset and achieves 98.7% accuracy, 98.3% sensitivity and 99.1% specificity with 2.68[Formula: see text]M multiply-accumulate operations (MACs) and only 88[Formula: see text]K parameters.
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Affiliation(s)
- Ziwei Wang
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
| | - Sujuan Hou
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
| | - Tiantian Xiao
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
| | - Yongfeng Zhang
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
| | - Hongbin Lv
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
| | - Jiacheng Li
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
| | - Shanshan Zhao
- Department of Hematology, Heze Hospital of Traditional Chinese Medicine, Heze 274000, P. R. China
| | - Yanna Zhao
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
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9
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Wang Z, Juhasz Z. GPU Implementation of the Improved CEEMDAN Algorithm for Fast and Efficient EEG Time-Frequency Analysis. SENSORS (BASEL, SWITZERLAND) 2023; 23:8654. [PMID: 37896747 PMCID: PMC10611056 DOI: 10.3390/s23208654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 10/09/2023] [Accepted: 10/20/2023] [Indexed: 10/29/2023]
Abstract
Time-frequency analysis of EEG data is a key step in exploring the internal activities of the human brain. Studying oscillations is an important part of the analysis, as they are thought to provide the underlying mechanism for communication between neural assemblies. Traditional methods of analysis, such as Short-Time FFT and Wavelet Transforms, are not ideal for this task due to the time-frequency uncertainty principle and their reliance on predefined basis functions. Empirical Mode Decomposition and its variants are more suited to this task as they are able to extract the instantaneous frequency and phase information but are too time consuming for practical use. Our aim was to design and develop a massively parallel and performance-optimized GPU implementation of the Improved Complete Ensemble EMD with the Adaptive Noise (CEEMDAN) algorithm that significantly reduces the computational time (from hours to seconds) of such analysis. The resulting GPU program, which is publicly available, was validated against a MATLAB reference implementation and reached over a 260× speedup for actual EEG measurement data, and provided predicted speedups in the range of 3000-8300× for longer measurements when sufficient memory was available. The significance of our research is that this implementation can enable researchers to perform EMD-based EEG analysis routinely, even for high-density EEG measurements. The program is suitable for execution on desktop, cloud, and supercomputer systems and can be the starting point for future large-scale multi-GPU implementations.
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Affiliation(s)
| | - Zoltan Juhasz
- Department of Electrical Engineering and Information Systems, University of Pannonia, 8200 Veszprem, Hungary;
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10
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Zeng Z, Xu Y, Zhou Y, Su R, Tao L, Wang Z, Chen C, Chen W. Prognostic Analysis of KCNQ2 Patients via Combining EEG Deep Features and Machine Learning Classifiers. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2023; 2023:1-4. [PMID: 38083766 DOI: 10.1109/embc40787.2023.10341098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2023]
Abstract
Pathogenic variants of the KCNQ2 gene often induces neonatal epilepsy in clinical. For better treatment, infants with confirmed KCNQ2 pathogenic variant and epilepsy symptoms need to adjust their treatment plans according to the outcome after taking antiseizure medicines (ASMs). This process is often time-consuming and requires long-term follow-up, which undoubtedly causes unnecessary psychological and economic burdens. In this study, we investigate the feasibility to predict the outcome of KCNQ2 patients via Electroencephalogram (EEG). By using the combination of deep networks and classical classifiers, the abnormal brain pathological activities recorded in EEGs can be encoded into deep features and decoded into specific KCNQ2 outcomes, thus taking the advantage of both powerful feature extraction capability from deep networks and stronger classification ability from classical classifiers. Specifically, we acquire 10-channel EEG signals from 33 infants with KCNQ2 pathogenic variants after taking ASMs. Two well-trained models (Resnet-50 and Resnet-18) are employed to extract deep features from the EEG spectrums. We achieve an accuracy of 78.7% to predict the KCNQ2 outcome of each infant. To our best knowledge, this is the first study to employ potential EEG pathological differences to predict the outcomes of KCNQ2 patients. The investigation of automatic KCNQ2 outcome prediction may contribute to a more convenient diagnosis mechanism for KCNQ2 patients.
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Li J, Pan W, Huang H, Pan J, Wang F. STGATE: Spatial-temporal graph attention network with a transformer encoder for EEG-based emotion recognition. Front Hum Neurosci 2023; 17:1169949. [PMID: 37125349 PMCID: PMC10133470 DOI: 10.3389/fnhum.2023.1169949] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Accepted: 03/27/2023] [Indexed: 05/02/2023] Open
Abstract
Electroencephalogram (EEG) is a crucial and widely utilized technique in neuroscience research. In this paper, we introduce a novel graph neural network called the spatial-temporal graph attention network with a transformer encoder (STGATE) to learn graph representations of emotion EEG signals and improve emotion recognition performance. In STGATE, a transformer-encoder is applied for capturing time-frequency features which are fed into a spatial-temporal graph attention for emotion classification. Using a dynamic adjacency matrix, the proposed STGATE adaptively learns intrinsic connections between different EEG channels. To evaluate the cross-subject emotion recognition performance, leave-one-subject-out experiments are carried out on three public emotion recognition datasets, i.e., SEED, SEED-IV, and DREAMER. The proposed STGATE model achieved a state-of-the-art EEG-based emotion recognition performance accuracy of 90.37% in SEED, 76.43% in SEED-IV, and 76.35% in DREAMER dataset, respectively. The experiments demonstrated the effectiveness of the proposed STGATE model for cross-subject EEG emotion recognition and its potential for graph-based neuroscience research.
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Affiliation(s)
| | | | | | | | - Fei Wang
- School of Software, South China Normal University, Guangzhou, China
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12
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Gao D, Tang X, Wan M, Huang G, Zhang Y. EEG driving fatigue detection based on log-Mel spectrogram and convolutional recurrent neural networks. Front Neurosci 2023; 17:1136609. [PMID: 36968502 PMCID: PMC10033857 DOI: 10.3389/fnins.2023.1136609] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Accepted: 02/07/2023] [Indexed: 03/29/2023] Open
Abstract
Driver fatigue detection is one of the essential tools to reduce accidents and improve traffic safety. Its main challenge lies in the problem of how to identify the driver's fatigue state accurately. Existing detection methods include yawning and blinking based on facial expressions and physiological signals. Still, lighting and the environment affect the detection results based on facial expressions. In contrast, the electroencephalographic (EEG) signal is a physiological signal that directly responds to the human mental state, thus reducing the impact on the detection results. This paper proposes a log-Mel spectrogram and Convolution Recurrent Neural Network (CRNN) model based on EEG to implement driver fatigue detection. This structure allows the advantages of the different networks to be exploited to overcome the disadvantages of using them individually. The process is as follows: first, the original EEG signal is subjected to a one-dimensional convolution method to achieve a Short Time Fourier Transform (STFT) and passed through a Mel filter bank to obtain a logarithmic Mel spectrogram, and then the resulting logarithmic Mel spectrogram is fed into a fatigue detection model to complete the fatigue detection task for the EEG signals. The fatigue detection model consists of a 6-layer convolutional neural network (CNN), bi-directional recurrent neural networks (Bi-RNNs), and a classifier. In the modeling phase, spectrogram features are transported to the 6-layer CNN to automatically learn high-level features, thereby extracting temporal features in the bi-directional RNN to obtain spectrogram-temporal information. Finally, the alert or fatigue state is obtained by a classifier consisting of a fully connected layer, a ReLU activation function, and a softmax function. Experiments were conducted on publicly available datasets in this study. The results show that the method can accurately distinguish between alert and fatigue states with high stability. In addition, the performance of four existing methods was compared with the results of the proposed method, all of which showed that the proposed method could achieve the best results so far.
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Affiliation(s)
- Dongrui Gao
- School of Computer Science, Chengdu University of Information Technology, Chengdu, China
| | - Xue Tang
- School of Computer Science, Chengdu University of Information Technology, Chengdu, China
| | - Manqing Wan
- School of Computer Science, Chengdu University of Information Technology, Chengdu, China
| | - Guo Huang
- School of Electronic Information and Artificial Intelligence, Leshan Normal University, Leshan, China
| | - Yongqing Zhang
- School of Computer Science, Chengdu University of Information Technology, Chengdu, China
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13
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Zhao X, Yoshida N, Ueda T, Sugano H, Tanaka T. Epileptic seizure detection by using interpretable machine learning models. J Neural Eng 2023; 20. [PMID: 36603215 DOI: 10.1088/1741-2552/acb089] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Accepted: 01/05/2023] [Indexed: 01/06/2023]
Abstract
Objective.Accurate detection of epileptic seizures using electroencephalogram (EEG) data is essential for epilepsy diagnosis, but the visual diagnostic process for clinical experts is a time-consuming task. To improve efficiency, some seizure detection methods have been proposed. Regardless of traditional or machine learning methods, the results identify only seizures and non-seizures. Our goal is not only to detect seizures but also to explain the basis for detection and provide reference information to clinical experts.Approach.In this study, we follow the visual diagnosis mechanism used by clinical experts that directly processes plotted EEG image data and apply some commonly used models of LeNet, VGG, deep residual network (ResNet), and vision transformer (ViT) to the EEG image classification task. Before using these models, we propose a data augmentation method using random channel ordering (RCO), which adjusts the channel order to generate new images. The Gradient-weighted class activation mapping (Grad-CAM) and attention layer methods are used to interpret the models.Main results.The RCO method can balance the dataset in seizure and non-seizure classes. The models achieved good performance in the seizure detection task. Moreover, the Grad-CAM and attention layer methods explained the detection basis of the model very well and calculate a value that measures the seizure degree.Significance.Processing EEG data in the form of images can flexibility to use a variety of machine learning models. The imbalance problem that exists widely in clinical practice is well solved by the RCO method. Since the method follows the visual diagnosis mechanism of clinical experts, the model interpretation results can be presented to clinical experts intuitively, and the quantitative information provided by the model is also a good diagnostic reference.
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Affiliation(s)
- Xuyang Zhao
- Department of Electrical Engineering and Computer Science, Tokyo University of Agriculture and Technology, Tokyo, Japan
| | | | - Tetsuya Ueda
- Faculty of Medicine, Juntendo University, Tokyo, Japan
| | | | - Toshihisa Tanaka
- Department of Electrical Engineering and Computer Science, Tokyo University of Agriculture and Technology, Tokyo, Japan
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14
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Wei Y, Liu Y, Li C, Cheng J, Song R, Chen X. TC-Net: A Transformer Capsule Network for EEG-based emotion recognition. Comput Biol Med 2023; 152:106463. [PMID: 36571938 DOI: 10.1016/j.compbiomed.2022.106463] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Revised: 11/30/2022] [Accepted: 12/19/2022] [Indexed: 12/24/2022]
Abstract
Deep learning has recently achieved remarkable success in emotion recognition based on Electroencephalogram (EEG), in which convolutional neural networks (CNNs) are the mostly used models. However, due to the local feature learning mechanism, CNNs have difficulty in capturing the global contextual information involving temporal domain, frequency domain, intra-channel and inter-channel. In this paper, we propose a Transformer Capsule Network (TC-Net), which mainly contains an EEG Transformer module to extract EEG features and an Emotion Capsule module to refine the features and classify the emotion states. In the EEG Transformer module, EEG signals are partitioned into non-overlapping windows. A Transformer block is adopted to capture global features among different windows, and we propose a novel patch merging strategy named EEG-PatchMerging (EEG-PM) to better extract local features. In the Emotion Capsule module, each channel of the EEG feature maps is encoded into a capsule to better characterize the spatial relationships among multiple features. Experimental results on two popular datasets (i.e., DEAP and DREAMER) demonstrate that the proposed method achieves the state-of-the-art performance in the subject-dependent scenario. Specifically, on DEAP (DREAMER), our TC-Net achieves the average accuracies of 98.76% (98.59%), 98.81% (98.61%) and 98.82% (98.67%) at valence, arousal and dominance dimensions, respectively. Moreover, the proposed TC-Net also shows high effectiveness in multi-state emotion recognition tasks using the popular VA and VAD models. The main limitation of the proposed model is that it tends to obtain relatively low performance in the cross-subject recognition task, which is worthy of further study in the future.
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Affiliation(s)
- Yi Wei
- Department of Biomedical Engineering, Hefei University of Technology, Hefei 230009, China.
| | - Yu Liu
- Department of Biomedical Engineering, Hefei University of Technology, Hefei 230009, China; Anhui Province Key Laboratory of Measuring Theory and Precision Instrument, Hefei University of Technology, Hefei 230009, China.
| | - Chang Li
- Department of Biomedical Engineering, Hefei University of Technology, Hefei 230009, China.
| | - Juan Cheng
- Department of Biomedical Engineering, Hefei University of Technology, Hefei 230009, China.
| | - Rencheng Song
- Department of Biomedical Engineering, Hefei University of Technology, Hefei 230009, China.
| | - Xun Chen
- Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei 230026, China.
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15
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Cao J, Feng Y, Zheng R, Cui X, Zhao W, Jiang T, Gao F. Two-Stream Attention 3-D Deep Network-Based Childhood Epilepsy Syndrome Classification. IEEE TRANSACTIONS ON INSTRUMENTATION AND MEASUREMENT 2023; 72:1-12. [DOI: 10.1109/tim.2022.3220287] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2025]
Affiliation(s)
- Jiuwen Cao
- Machine Learning and I-Health International Cooperation Base of Zhejiang Province, Artificial Intelligence Institute, Hangzhou Dianzi University, Zhejiang, China
| | - Yuanmeng Feng
- Machine Learning and I-Health International Cooperation Base of Zhejiang Province, Artificial Intelligence Institute, Hangzhou Dianzi University, Zhejiang, China
| | - Runze Zheng
- Machine Learning and I-Health International Cooperation Base of Zhejiang Province, Artificial Intelligence Institute, Hangzhou Dianzi University, Zhejiang, China
| | - Xiaonan Cui
- Machine Learning and I-Health International Cooperation Base of Zhejiang Province, Artificial Intelligence Institute, Hangzhou Dianzi University, Zhejiang, China
| | - Weijie Zhao
- Machine Learning and I-Health International Cooperation Base of Zhejiang Province, Artificial Intelligence Institute, Hangzhou Dianzi University, Zhejiang, China
| | - Tiejia Jiang
- Department of Neurology, The Children’s Hospital, Zhejiang University School of Medicine, National Clinical Research Center for Child Health, Hangzhou, China
| | - Feng Gao
- Machine Learning and I-Health International Cooperation Base of Zhejiang Province, Artificial Intelligence Institute, Hangzhou Dianzi University, Zhejiang, China
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16
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Eltrass AS, Tayel MB, El-Qady AF. Identification and classification of epileptic EEG signals using invertible constant- Qtransform-based deep convolutional neural network. J Neural Eng 2022; 19. [PMID: 36541556 DOI: 10.1088/1741-2552/aca82c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Accepted: 12/01/2022] [Indexed: 12/04/2022]
Abstract
Context.Epilepsy is the most widespread disorder of the nervous system, affecting humans of all ages and races. The most common diagnostic test in epilepsy is the electroencephalography (EEG).Objective.In this paper, a novel automated deep learning approach based on integrating a pre-trained convolutional neural network (CNN) structure, called AlexNet, with the constant-Qnon-stationary Gabor transform (CQ-NSGT) algorithm is proposed for classifying seizure versus seizure-free EEG records.Approach.The CQ-NSGT method is introduced to transform the input 1D EEG signal into 2D spectrogram which is sent to the AlexNet CNN model. The AlexNet architecture is utilized to capture the discriminating features of the 2D image corresponding to each EEG signal in order to distinguish seizure and non-seizure subjects using multi-layer perceptron algorithm.Main results. The robustness of the introduced CQ-NSGT technique in transforming the 1D EEG signals into 2D spectrograms is assessed by comparing its classification results with the continuous wavelet transform method, and the results elucidate the high performance of the CQ-NSGT technique. The suggested epileptic seizure classification framework is investigated with clinical EEG data acquired from the Bonn University database, and the experimental results reveal the superior performance of the proposed framework over other state-of-the-art approaches with an accuracy of 99.56%, sensitivity of 99.12%, specificity of 99.67%, and precision of 98.69%.Significance.This elucidates the importance of the proposed automated system in helping neurologists to accurately interpret and classify epileptic EEG records without necessitating tedious visual inspection or massive data analysis for long-term EEG signals.
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Affiliation(s)
- Ahmed S Eltrass
- Electrical Engineering Department, Faculty of Engineering, Alexandria University, Alexandria, Egypt
| | - Mazhar B Tayel
- Electrical Engineering Department, Faculty of Engineering, Alexandria University, Alexandria, Egypt
| | - Ahmed F El-Qady
- Communications and Electronics Department, Higher Institute of Engineering and Technology King Marriott Academy, Alexandria, Egypt
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17
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Epileptic Seizure Detection Using a Hybrid 1D CNN-Machine Learning Approach from EEG Data. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:9579422. [PMID: 36483658 PMCID: PMC9726261 DOI: 10.1155/2022/9579422] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Revised: 10/24/2022] [Accepted: 11/15/2022] [Indexed: 12/02/2022]
Abstract
Electroencephalography (EEG) is a widely used technique for the detection of epileptic seizures. It can be recorded in a noninvasive manner to present the electrical activity of the brain. The visual inspection of nonlinear and highly complex EEG signals is both costly and time-consuming. Therefore, an effective automatic detection system is needed to assist in the long-term evaluation and treatment of patients. Traditional approaches based on machine learning require feature extraction, while deep learning approaches are time-consuming and require more layers for effective feature learning and processing of complex EEG waveforms. Deep learning-based approaches also have weak generalization ability. This paper proposes a solution based on the combination of convolution neural networks (CNN) and machine learning classifiers. It preprocesses the EEG signal using the Butterworth filter and performs feature extraction using CNN. From the extracted set of features, the approach selects only the relevant features using mutual information-based estimators to reduce the curse of dimensionality and improve classification accuracy. The selected features are then passed as input to different machine learning classifiers. The suggested solution is evaluated on the University of Bonn dataset and CHB-MIT datasets. Our model effectively predicts 2, 3, 4, and 5 classes with accuracy of 100%, 99%, 94.6%, and 94%, respectively, for the Bonn dataset and 98% for CHB-MIT datasets.
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18
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Huang X, Sun X, Zhang L, Zhu T, Yang H, Xiong Q, Feng L. A Novel Epilepsy Detection Method Based on Feature Extraction by Deep Autoencoder on EEG Signal. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:15110. [PMID: 36429845 PMCID: PMC9690147 DOI: 10.3390/ijerph192215110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 11/12/2022] [Accepted: 11/13/2022] [Indexed: 06/16/2023]
Abstract
Electroencephalogram (EEG) signals are the gold standard tool for detecting epileptic seizures. Long-term EEG signal monitoring is a promising method to realize real-time and automatic epilepsy detection with the assistance of computer-aided techniques and the Internet of Medical Things (IoMT) devices. Machine learning (ML) algorithms combined with advanced feature extraction methods have been widely explored to precisely recognize EEG signals, while among which, little attention has been paid to high computing costs and severe information losses. The lack of model interpretability also impedes the wider application and deeper understanding of ML methods in epilepsy detection. In this research, a novel feature extraction method based on an autoencoder (AE) is proposed in the time domain. The architecture and mechanism are elaborated. In this method, specified features are defined and calculated on the basis of signal reconstruction quantification of the AE. The EEG recognition is performed to validate the effectiveness of the proposed detection method, and the prediction accuracy reached 97%. To further investigate the superiority of the proposed AE-based feature extraction method, a widely used feature extraction method, PCA, is allocated for comparison. In order to understand the underlying working mechanism, permutation importance and SHapley Additive exPlanations (SHAP) are conducted for model interpretability, and the results further confirm the reasonability and effectiveness of the extracted features by AE reconstruction. With high computing efficiency in the time domain and an extensively satisfactory accuracy, the proposed epilepsy detection method exhibits great superiority and potential in almost real-time and automatic epilepsy monitoring.
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Affiliation(s)
- Xiaojie Huang
- School of Basic Medical Sciences, Anhui Medical University, Hefei 230032, China
- Institute of Biopharmaceuticals, Anhui Medical University, Hefei 230032, China
| | - Xiangtao Sun
- Department of Disaster Mitigation for Structures, Tongji University, Shanghai 200092, China
| | - Lijun Zhang
- School of Basic Medical Sciences, Anhui Medical University, Hefei 230032, China
- Institute of Biopharmaceuticals, Anhui Medical University, Hefei 230032, China
| | - Tong Zhu
- School of Basic Medical Sciences, Anhui Medical University, Hefei 230032, China
- Institute of Biopharmaceuticals, Anhui Medical University, Hefei 230032, China
| | - Hao Yang
- School of Basic Medical Sciences, Anhui Medical University, Hefei 230032, China
- Institute of Biopharmaceuticals, Anhui Medical University, Hefei 230032, China
| | - Qingsong Xiong
- Department of Disaster Mitigation for Structures, Tongji University, Shanghai 200092, China
| | - Lijie Feng
- School of Basic Medical Sciences, Anhui Medical University, Hefei 230032, China
- Institute of Biopharmaceuticals, Anhui Medical University, Hefei 230032, China
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19
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Zhang L, Liu Y, Zhou J, Luo M, Pu S, Yang X. An Imbalanced Fault Diagnosis Method Based on TFFO and CNN for Rotating Machinery. SENSORS (BASEL, SWITZERLAND) 2022; 22:s22228749. [PMID: 36433352 PMCID: PMC9692439 DOI: 10.3390/s22228749] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Revised: 11/09/2022] [Accepted: 11/10/2022] [Indexed: 05/27/2023]
Abstract
Deep learning-based fault diagnosis usually requires a rich supply of data, but fault samples are scarce in practice, posing a considerable challenge for existing diagnosis approaches to achieve highly accurate fault detection in real applications. This paper proposes an imbalanced fault diagnosis of rotatory machinery that combines time-frequency feature oversampling (TFFO) with a convolutional neural network (CNN). First, the sliding segmentation sampling method is employed to primarily increase the number of fault samples in the form of one-dimensional signals. Immediately after, the signals are converted into two-dimensional time-frequency feature maps by continuous wavelet transform (CWT). Subsequently, the minority samples are expanded again using the synthetic minority oversampling technique (SMOTE) to realize TFFO. After such two-fold data expansion, a balanced data set is obtained and imported to an improved 2dCNN based on the LeNet-5 to implement fault diagnosis. In order to verify the proposed method, two experiments involving single and compound faults are conducted on locomotive wheel-set bearings and a gearbox, resulting in several datasets with different imbalanced degrees and various signal-to-noise ratios. The results demonstrate the advantages of the proposed method in terms of classification accuracy and stability as well as noise robustness in imbalanced fault diagnosis, and the fault classification accuracy is over 97%.
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20
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Localization of epileptogenic foci by automatic detection of high‐frequency oscillations based on waveform feature templates. INT J INTELL SYST 2022. [DOI: 10.1002/int.23052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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21
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Li H, Wu L. EEG Classification of Normal and Alcoholic by Deep Learning. Brain Sci 2022; 12:778. [PMID: 35741663 PMCID: PMC9220822 DOI: 10.3390/brainsci12060778] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 06/06/2022] [Accepted: 06/11/2022] [Indexed: 12/21/2022] Open
Abstract
Alcohol dependence is a common mental disease worldwide. Excessive alcohol consumption may lead to alcoholism and many complications. In severe cases, it will lead to inhibition and paralysis of the centers of the respiratory and circulatory systems and even death. In addition, there is a lack of effective standard test procedures to detect alcoholism. EEG signals are data obtained by measuring brain changes in the cerebral cortex and can be used for the diagnosis of alcoholism. Existing diagnostic methods mainly employ machine learning techniques, which rely on human intervention to learn. In contrast, deep learning, as an end-to-end learning method, can automatically extract EEG signal features, which is more convenient. Nonetheless, there are few studies on the classification of alcohol's EEG signals using deep learning models. Therefore, in this paper, a new deep learning method is proposed to automatically extract and classify EEG's features. The method first adopts a multilayer discrete wavelet transform to denoise the input data. Then, the denoised data are used as input, and a convolutional neural network and bidirectional long short-term memory network are used for feature extraction. Finally, alcohol EEG signal classification is performed. The experimental results show that the method proposed in this study can be utilized to effectively diagnose patients with alcoholism, achieving a diagnostic accuracy of 99.32%, which is better than most current algorithms.
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Affiliation(s)
- Houchi Li
- School of Computer Science and Engineering, Hunan University of Science and Technology, Xiangtan 411100, China;
| | - Lei Wu
- Hunan Engineering Research Center for Intelligent Decision Making and Big Data on Industrial Development, Hunan University of Science and Technology, Xiangtan 411100, China
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22
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Wang Z, Mengoni P. Seizure classification with selected frequency bands and EEG montages: a Natural Language Processing approach. Brain Inform 2022; 9:11. [PMID: 35622175 PMCID: PMC9142724 DOI: 10.1186/s40708-022-00159-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Accepted: 04/17/2022] [Indexed: 11/10/2022] Open
Abstract
Individualized treatment is crucial for epileptic patients with different types of seizures. The differences among patients impact the drug choice as well as the surgery procedure. With the advance in machine learning, automatic seizure detection can ease the manual time-consuming and labor-intensive procedure for diagnose seizure in the clinical setting. In this paper, we present an electroencephalography (EEG) frequency bands (sub-bands) and montages selection (sub-zones) method for classifier training that exploits Natural Language Processing from individual patients' clinical report. The proposed approach is targeting for individualized treatment. We integrated the prior knowledge from patient's reports into the classifier-building process, mimicking the authentic thinking process of experienced neurologist's when diagnosing seizure using EEG. The keywords from clinical documents are mapped to the EEG data in terms of frequency bands and scalp EEG electrodes. The data of experiments are from the Temple University Hospital EEG seizure corpus, and the dataset is divided based on each group of patients with same seizure type and same recording electrode references. The classifier includes Random Forest, Support Vector Machine and Multi-Layer Perceptron. The classification performance indicates that competitive results can be achieve with a small portion of EEG the data. Using the sub-zones selection for Generalized Seizures (GNSZ) on all three electrodes, data are reduced by nearly 50% while the performance metrics remain at the same level with the whole frequency and zones. Moreover, when selecting by sub-zones and sub-bands together for GNSZ with Linked Ears reference, the data range reduced to 0.3% of whole range, and the performance deviates less than 3% from the results with whole range of data. Results show that using proposed approach may lead to more efficient implementations of the seizure classifier to be executed on power-efficient devices for long lasting real-time seizures detection.
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Affiliation(s)
- Ziwei Wang
- Institute of Interdisciplinary Studies, Hong Kong Baptist University, Kowloon Tong, Hong Kong SAR China
| | - Paolo Mengoni
- Department of Journalism, Hong Kong Baptist University, Kowloon Tong, Hong Kong SAR China
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23
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Comparison of Time-Frequency Analyzes for a Sleep Staging Application with CNN. JOURNAL OF BIOMIMETICS BIOMATERIALS AND BIOMEDICAL ENGINEERING 2022. [DOI: 10.4028/p-2j5c10] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Sleep staging is the process of acquiring biological signals during sleep and marking them according to the stages of sleep. The procedure is performed by an experienced physician and takes more time. When this process is automated, the processing load will be reduced and the time required to identify disease will also be reduced. In this paper, 8 different transform methods for automatic sleep-staging based on convolutional neural networks (CNNs) were compared to classify sleep stages using single-channel electroencephalogram (EEG) signals. Five different labels were used to stage the sleep. These are Wake (W), Non Rapid Eye Movement (NonREM)-1 (N1), NonREM-2 (N2), NonREM-3 (N3), and REM (R). The classifications were done end-to-end without any hand-crafted features, ie without requiring any feature engineering. Time-Frequency components obtained by Short Time Fourier Transform, Discrete Wavelet Transform, Discrete Cosine Transform, Hilbert-Huang Transform, Discrete Gabor Transform, Fast Walsh-Hadamard Transform, Choi-Williams Distribution, and Wigner-Willie Distribution were classified with a supervised deep convolutional neural network to perform sleep staging. The discrete Cosine Transform-CNN method (DCT-CNN) showed the highest performance among the methods suggested in this paper with an F1 score of 89% and a value of 0.86 kappa. The findings of this study revealed that the transformation techniques utilized for the most accurate representation of input data are far superior to traditional approaches based on manual feature extraction, which acquires time, frequency, or nonlinear characteristics. The results of this article are expected to be useful to researchers in the development of low-cost, and easily portable devices.
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24
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Zhang Y, Yao S, Yang R, Liu X, Qiu W, Han L, Zhou W, Shang W. Epileptic Seizure Detection Based on Bidirectional Gated Recurrent Unit Network. IEEE Trans Neural Syst Rehabil Eng 2022; 30:135-145. [PMID: 35030083 DOI: 10.1109/tnsre.2022.3143540] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Visual inspection of long-term electroencephalography (EEG) is a tedious task for physicians in neurology. Based on bidirectional gated recurrent unit (Bi-GRU) neural network, an automatic seizure detection method is proposed in this paper to facilitate the diagnosis and treatment of epilepsy. Firstly, wavelet transforms are applied to EEG recordings for filtering pre-processing. Then the relative energies of signals in several particular frequency bands are calculated and inputted into Bi-GRU network. Afterwards, the outputs of Bi-GRU network are further processed by moving average filtering, threshold comparison and seizure merging to generate the discriminant results that the tested EEG belong to seizure or not. Evaluated on CHB-MIT scalp EEG database, the proposed seizure detection method obtained an average sensitivity of 93.89% and an average specificity of 98.49%. 124 out of 128 seizures were correctly detected and the achieved average false detection rate was 0.31 per hour on 867.14 h testing data. The results show the superiority of Bi-GRU network in seizure detection and the proposed detection method has a promising potential in the monitoring of long-term EEG.
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25
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Zhou Y, Xu Z, Niu Y, Wang P, Wen X, Wu X, Zhang D. Cross-task Cognitive Workload Recognition Based on EEG and Domain Adaptation. IEEE Trans Neural Syst Rehabil Eng 2022; 30:50-60. [PMID: 34986098 DOI: 10.1109/tnsre.2022.3140456] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Cognitive workload recognition is pivotal to maintain the operator's health and prevent accidents in the human-robot interaction condition. So far, the focus of workload research is mostly restricted to a single task, yet cross-task cognitive workload recognition has remained a challenge. Furthermore, when extending to a new workload condition, the discrepancy of electroencephalogram (EEG) signals across various cognitive tasks limits the generalization of the existed model. To tackle this problem, we propose to construct the EEG-based cross-task cognitive workload recognition models using domain adaptation methods in a leave-one-task-out cross-validation setting, where we view any task of each subject as a domain. Specifically, we first design a fine-grained workload paradigm including working memory and mathematic addition tasks. Then, we explore four domain adaptation methods to bridge the discrepancy between the two different tasks. Finally, based on the supporting vector machine classifier, we conduct experiments to classify the low and high workload levels on a private EEG dataset. Experimental results demonstrate that our proposed task transfer framework outperforms the non-transfer classifier with improvements of 3% to 8% in terms of mean accuracy, and the transfer joint matching (TJM) consistently achieves the best performance.
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26
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Narendra R, Suresha M, Manjunatha Aradhya VN. COSLETS: Recognition of Emotions Based on EEG Signals. Brain Inform 2022. [DOI: 10.1007/978-3-031-15037-1_4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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27
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Smith ES, Elliott D, Killick R, Crawford TJ, Kidby S, Reid VM. Infants Oscillatory Frequencies change during Free-Play. Infant Behav Dev 2021; 64:101612. [PMID: 34332261 DOI: 10.1016/j.infbeh.2021.101612] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 07/06/2021] [Accepted: 07/16/2021] [Indexed: 10/20/2022]
Abstract
Social interactions are known to be an essential component of infant development. For this reason, exploring functional neural activity while infants are engaged in social interactions will enable a better understanding of the infant social brain. This in turn, will enable the beginning of disentangling the neural basis of social and non-social interactions as well as the influence that maternal engagement has on infant brain function. Maternal sensitivity serves as a model for socio-emotional development during infancy, which poses the question: do interactions between parents and their offspring present altered electrophysiological responses in comparison to the general population if said parents are at risk of mental health disorders? The current research aimed to observe the oscillatory activity of 6-month-old infants during spontaneous free-play interactions with their mother. A 5-minute unconstrained free-play session was recorded between infant-mother dyads with EEG recordings taken from the 6-month-old infants (n = 64). During the recording, social and non-social behaviours were coded and EEG assessed with these epochs. Results showed an increase in oscillatory activity both when an infant played independently or interacted with their mother and oscillatory power was greatest in the alpha and theta bands. In the present 6-month-old cohort, no hemispheric power differences were observed as oscillatory power in the corresponding neural regions (i.e. left and right temporal regions) appeared to mirror each other. Instead, temporal estimates were larger and different from all other regions, whilst the frontal and parietal regions bihemispherically displayed similar estimates, which were larger than those observed centrally, but smaller than those displayed in the temporal locations. The interactions observed between the behavioural events and frequency bands demonstrated a significant reduction in power comparative to the power observed in the gamma band during the baseline event. The present research sought to explore the obstacle of artificial play paradigms for neuroscience research, whereby researchers question how much these paradigms relate to reality. The present manuscript will discuss the strengths and limitations of taking an unconstrained free-play approach.
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Affiliation(s)
- Eleanor S Smith
- Department of Psychology, Lancaster University, Bailrigg, UK; Department of Experimental Psychology, Downing Site, Downing Street, University of Cambridge, Cambridge, UK.
| | - David Elliott
- Department of Psychology, Lancaster University, Bailrigg, UK; School of Mathematics, University of Edinburgh, Edinburgh, UK
| | - Rebecca Killick
- Department of Mathematics and Statistics, Lancaster University, Bailrigg, UK
| | | | - Sayaka Kidby
- Department of Psychology, Lancaster University, Bailrigg, UK
| | - Vincent M Reid
- Department of Psychology, Lancaster University, Bailrigg, UK; School of Psychology, The University of Waikato, New Zealand
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28
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Rybak G, Strzecha K. Short-Time Fourier Transform Based on Metaprogramming and the Stockham Optimization Method. SENSORS 2021; 21:s21124123. [PMID: 34203992 PMCID: PMC8232722 DOI: 10.3390/s21124123] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Revised: 06/08/2021] [Accepted: 06/12/2021] [Indexed: 11/20/2022]
Abstract
The extension for high-performance STFT (Short-Time Fourier Transform) algorithm written entirely in Java language for non-parallel computations is presented in the current paper. This solution could compete with the best available and most common algorithms supplied by libraries such as FFTW or JTransform. The main idea was to move complex computations and expensive functions to the program generation phase. Thus, only core and essential operations were executed during the runtime phase. Furthermore, new approach allows to eliminate the necessity for a rearrangement operation that uses the bit-reversal permutation technique. This article presents a brief description of the STFT solution that was worked out as an extension for the original application, in order to increase its efficiency. The solution remains a Stockham algorithm adapted using metaprogramming techniques and entails an additional reduction its execution time. Performance tests and experiments were conducted using a Java Platform and JMH library, which allowed for accurate execution time measurements. Major aspects of the Java VM like warm-up effects were also taken into consideration. Solution was applied into Electrical Capacitance Tomography measurement system in order to measure the material changes during the silo discharging industrial process.
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Madanu R, Rahman F, Abbod MF, Fan SZ, Shieh JS. Depth of anesthesia prediction via EEG signals using convolutional neural network and ensemble empirical mode decomposition. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2021; 18:5047-5068. [PMID: 34517477 DOI: 10.3934/mbe.2021257] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
According to a recently conducted survey on surgical complication mortality rate, 47% of such cases are due to anesthetics overdose. This indicates that there is an urgent need to moderate the level of anesthesia. Recently deep learning (DL) methods have played a major role in estimating the depth of Anesthesia (DOA) of patients and has played an essential role in control anesthesia overdose. In this paper, Electroencephalography (EEG) signals have been used for the prediction of DOA. EEG signals are very complex signals which may require months of training and advanced signal processing techniques. It is a point of debate whether DL methods are an improvement over the already existing traditional EEG signal processing approaches. One of the DL algorithms is Convolutional neural network (CNN) which is very popular algorithm for object recognition and is widely growing its applications in processing hierarchy in the human visual system. In this paper, various decomposition methods have been used for extracting the features EEG signal. After acquiring the necessary signals values in image format, several CNN models have been deployed for classification of DOA depending upon their Bispectral Index (BIS) and the signal quality index (SQI). The EEG signals were converted into the frequency domain using and Empirical Mode Decomposition (EMD), and Ensemble Empirical Mode Decomposition (EEMD). However, because of the inter mode mixing observed in EMD method; EEMD have been utilized for this study. The developed CNN models were used to predict the DOA based on the EEG spectrum images without the use of handcrafted features which provides intuitive mapping with high efficiency and reliability. The best trained model gives an accuracy of 83.2%. Hence, this provides further scope and research which can be carried out in the domain of visual mapping of DOA using EEG signals and DL methods.
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Affiliation(s)
- Ravichandra Madanu
- Department of Mechanical Engineering, Yuan Ze University, Taoyuan 320, Taiwan
| | - Farhan Rahman
- Department of Electronics and Communication Engineering, Vellore Institute of Technology, Tamil Nadu 632014, India
| | - Maysam F Abbod
- Department of Electronic and Computer Engineering, Brunel University London, Uxbridge UB8 3PH, UK
| | - Shou-Zen Fan
- Department of Anesthesiology, College of Medicine, National Taiwan University, Taipei 100, Taiwan
| | - Jiann-Shing Shieh
- Department of Mechanical Engineering, Yuan Ze University, Taoyuan 320, Taiwan
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Gonzalez H, George R, Muzaffar S, Acevedo J, Hoppner S, Mayr C, Yoo J, Fitzek F, Elfadel I. Hardware Acceleration of EEG-Based Emotion Classification Systems: A Comprehensive Survey. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2021; 15:412-442. [PMID: 34125683 DOI: 10.1109/tbcas.2021.3089132] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Recent years have witnessed a growing interest in EEG-based wearable classifiers of emotions, which could enable the real-time monitoring of patients suffering from neurological disorders such as Amyotrophic Lateral Sclerosis (ALS), Autism Spectrum Disorder (ASD), or Alzheimer's. The hope is that such wearable emotion classifiers would facilitate the patients' social integration and lead to improved healthcare outcomes for them and their loved ones. Yet in spite of their direct relevance to neuro-medicine, the hardware platforms for emotion classification have yet to fill up some important gaps in their various approaches to emotion classification in a healthcare context. In this paper, we present the first hardware-focused critical review of EEG-based wearable classifiers of emotions and survey their implementation perspectives, their algorithmic foundations, and their feature extraction methodologies. We further provide a neuroscience-based analysis of current hardware accelerators of emotion classifiers and use it to map out several research opportunities, including multi-modal hardware platforms, accelerators with tightly-coupled cores operating robustly in the near/supra-threshold region, and pre-processing libraries for universal EEG-based datasets.
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Khan NA, Ali S, Choi K. An instantaneous frequency and group delay based feature for classifying EEG signals. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102562] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Sui L, Zhao X, Zhao Q, Tanaka T, Cao J. Hybrid Convolutional Neural Network for Localization of Epileptic Focus Based on iEEG. Neural Plast 2021; 2021:6644365. [PMID: 34007267 PMCID: PMC8100408 DOI: 10.1155/2021/6644365] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2020] [Revised: 03/14/2021] [Accepted: 04/06/2021] [Indexed: 11/17/2022] Open
Abstract
Epileptic focus localization by analysing intracranial electroencephalogram (iEEG) plays a critical role in successful surgical therapy of resection of the epileptogenic lesion. However, manual analysis and classification of the iEEG signal by clinicians are arduous and time-consuming and excessively depend on the experience. Due to individual differences of patients, the iEEG signal from different patients usually shows very diverse features even if the features belong to the same class. Accordingly, automatic detection of epileptic focus is required to improve the accuracy and to shorten the time for treatment. In this paper, we propose a novel feature fusion-based iEEG classification method, a deep learning model termed Time-Frequency Hybrid Network (TF-HybridNet), in which short-time Fourier transform (STFT) and 1d convolution layers are performed on the input iEEG in parallel to extract features of the time-frequency domain and feature maps. And then, the time-frequency features and feature maps are fused and fed to a 2d convolutional neural network (CNN). We used the Bern-Barcelona iEEG dataset for evaluating the performance of TF-HybridNet, and the experimental results show that our approach is able to differentiate the focal from nonfocal iEEG signal with an average classification accuracy of 94.3% and demonstrates an improved accuracy rate compared to the model using only STFT or one-dimensional convolutional layers as feature extraction.
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Affiliation(s)
- Linfeng Sui
- Graduate School of Engineering, Saitama Institute of Technology, 369-0293, Japan
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
| | - Xuyang Zhao
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
- Department of Electrical and Electronic Engineering, Tokyo University of Agriculture and Technology, 184-8588, Japan
| | - Qibin Zhao
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
| | - Toshihisa Tanaka
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
- Department of Electrical and Electronic Engineering, Tokyo University of Agriculture and Technology, 184-8588, Japan
| | - Jianting Cao
- Graduate School of Engineering, Saitama Institute of Technology, 369-0293, Japan
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
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Rivieccio BA, Micheletti A, Maffeo M, Zignani M, Comunian A, Nicolussi F, Salini S, Manzi G, Auxilia F, Giudici M, Naldi G, Gaito S, Castaldi S, Biganzoli E. CoViD-19, learning from the past: A wavelet and cross-correlation analysis of the epidemic dynamics looking to emergency calls and Twitter trends in Italian Lombardy region. PLoS One 2021; 16:e0247854. [PMID: 33630966 PMCID: PMC7906455 DOI: 10.1371/journal.pone.0247854] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Accepted: 02/15/2021] [Indexed: 01/22/2023] Open
Abstract
The first case of Coronavirus Disease 2019 in Italy was detected on February the 20th in Lombardy region. Since that date, Lombardy has been the most affected Italian region by the epidemic, and its healthcare system underwent a severe overload during the outbreak. From a public health point of view, therefore, it is fundamental to provide healthcare services with tools that can reveal possible new health system stress periods with a certain time anticipation, which is the main aim of the present study. Moreover, the sequence of law decrees to face the epidemic and the large amount of news generated in the population feelings of anxiety and suspicion. Considering this whole complex context, it is easily understandable how people "overcrowded" social media with messages dealing with the pandemic, and emergency numbers were overwhelmed by the calls. Thus, in order to find potential predictors of possible new health system overloads, we analysed data both from Twitter and emergency services comparing them to the daily infected time series at a regional level. Particularly, we performed a wavelet analysis in the time-frequency plane, to finely discriminate over time the anticipation capability of the considered potential predictors. In addition, a cross-correlation analysis has been performed to find a synthetic indicator of the time delay between the predictor and the infected time series. Our results show that Twitter data are more related to social and political dynamics, while the emergency calls trends can be further evaluated as a powerful tool to potentially forecast new stress periods. Since we analysed aggregated regional data, and taking into account also the huge geographical heterogeneity of the epidemic spread, a future perspective would be to conduct the same analysis on a more local basis.
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Affiliation(s)
- Bruno Alessandro Rivieccio
- Department of Laboratory Medicine, Division of Anatomic Pathology, Niguarda Hospital, Milan, Italy
- * E-mail:
| | | | - Manuel Maffeo
- Department of Biomedical Sciences for Health, University of Milan, Milan, Italy
- Public Health Post Graduate School, University of Milan, Milan, Italy
| | - Matteo Zignani
- Department of Computer Science, University of Milan, Milan, Italy
| | | | - Federica Nicolussi
- Department of Economics, Management and Quantitative Methods & Data Science Research Center, University of Milan, Milan, Italy
| | - Silvia Salini
- Department of Economics, Management and Quantitative Methods & Data Science Research Center, University of Milan, Milan, Italy
| | - Giancarlo Manzi
- Department of Economics, Management and Quantitative Methods & Data Science Research Center, University of Milan, Milan, Italy
| | - Francesco Auxilia
- Department of Biomedical Sciences for Health, University of Milan, Milan, Italy
- ASST FBF-Sacco, Milan, Italy
| | - Mauro Giudici
- Department of Earth Sciences, University of Milan, Milan, Italy
| | - Giovanni Naldi
- Department of Environmental Science and Policy, University of Milan, Milan, Italy
| | - Sabrina Gaito
- Department of Computer Science, University of Milan, Milan, Italy
| | - Silvana Castaldi
- Department of Biomedical Sciences for Health, University of Milan, Milan, Italy
- Fondazione IRCCS Ca’ Granda Ospedale Maggiore, Milan, Italy
| | - Elia Biganzoli
- Department of Clinical Sciences and Community Health & Data Science Research Center, University of Milan, Milan, Italy
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Yue H, Lin Y, Wu Y, Wang Y, Li Y, Guo X, Huang Y, Wen W, Zhao G, Pang X, Lei W. Deep Learning for Diagnosis and Classification of Obstructive Sleep Apnea: A Nasal Airflow-Based Multi-Resolution Residual Network. Nat Sci Sleep 2021; 13:361-373. [PMID: 33737850 PMCID: PMC7966385 DOI: 10.2147/nss.s297856] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 02/19/2021] [Indexed: 12/17/2022] Open
Abstract
PURPOSE This study evaluated a novel approach for diagnosis and classification of obstructive sleep apnea (OSA), called Obstructive Sleep Apnea Smart System (OSASS), using residual networks and single-channel nasal pressure airflow signals. METHODS Data were collected from the sleep center of the First Affiliated Hospital, Sun Yat-sen University, and the Integrative Department of Guangdong Province Traditional Chinese Medical Hospital. We developed a new model called the multi-resolution residual network (Mr-ResNet) based on a residual network to detect nasal pressure airflow signals recorded by polysomnography (PSG) automatically. The performance of the model was assessed by its sensitivity, specificity, accuracy, and F1-score. We built OSASS based on Mr-ResNet to estimate the apnea‒hypopnea index (AHI) and to classify the severity of OSA, and compared the agreement between OSASS output and the registered polysomnographic technologist (RPSGT) score, assessed by two technologists. RESULTS In the primary test set, the sensitivity, specificity, accuracy, and F1-score of Mr-ResNet were 90.8%, 90.5%, 91.2%, and 90.5%, respectively. In the independent test set, the Spearman correlation for AHI between OSASS and the RPSGT score determined by two technologists was 0.94 (p < 0.001) and 0.96 (p < 0.001), respectively. Cohen's Kappa scores for classification between OSASS and the two technologists' scores were 0.81 and 0.84, respectively. CONCLUSION Our results indicated that OSASS can automatically diagnose and classify OSA using signals from a single-channel nasal pressure airflow, which is consistent with polysomnographic technologists' findings. Thus, OSASS holds promise for clinical application.
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Affiliation(s)
- Huijun Yue
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Yu Lin
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Yitao Wu
- School of Computer Science, South China Normal University, Guangzhou, 510631, People's Republic of China
| | - Yongquan Wang
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Yun Li
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Xueqin Guo
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Ying Huang
- Guangdong Province Traditional Chinese Medical Hospital, Guangzhou, 510000, People's Republic of China
| | - Weiping Wen
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Gansen Zhao
- School of Computer Science, South China Normal University, Guangzhou, 510631, People's Republic of China
| | - Xiongwen Pang
- School of Computer Science, South China Normal University, Guangzhou, 510631, People's Republic of China
| | - Wenbin Lei
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
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Zhou Y, Huang S, Xu Z, Wang P, Wu X, Zhang D. Cognitive Workload Recognition Using EEG Signals and Machine Learning: A Review. IEEE Trans Cogn Dev Syst 2021. [DOI: 10.1109/tcds.2021.3090217] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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36
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Analysis of epileptic EEG signals by using dynamic mode decomposition and spectrum. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2020.11.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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37
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Nataraj SK, Paulraj MP, Yaacob SB, Adom AHB. Thought-Actuated Wheelchair Navigation with Communication Assistance Using Statistical Cross-Correlation-Based Features and Extreme Learning Machine. JOURNAL OF MEDICAL SIGNALS & SENSORS 2020; 10:228-238. [PMID: 33575195 PMCID: PMC7866946 DOI: 10.4103/jmss.jmss_52_19] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Revised: 10/31/2019] [Accepted: 03/20/2020] [Indexed: 11/24/2022]
Abstract
Background: A simple data collection approach based on electroencephalogram (EEG) measurements has been proposed in this study to implement a brain–computer interface, i.e., thought-controlled wheelchair navigation system with communication assistance. Method: The EEG signals are recorded for seven simple tasks using the designed data acquisition procedure. These seven tasks are conceivably used to control wheelchair movement and interact with others using any odd-ball paradigm. The proposed system records EEG signals from 10 individuals at eight-channel locations, during which the individual executes seven different mental tasks. The acquired brainwave patterns have been processed to eliminate noise, including artifacts and powerline noise, and are then partitioned into six different frequency bands. The proposed cross-correlation procedure then employs the segmented frequency bands from each channel to extract features. The cross-correlation procedure was used to obtain the coefficients in the frequency domain from consecutive frame samples. Then, the statistical measures (“minimum,” “mean,” “maximum,” and “standard deviation”) were derived from the cross-correlated signals. Finally, the extracted feature sets were validated through online sequential-extreme learning machine algorithm. Results and Conclusion: The results of the classification networks were compared with each set of features, and the results indicated that μ (r) feature set based on cross-correlation signals had the best performance with a recognition rate of 91.93%.
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Affiliation(s)
- Sathees Kumar Nataraj
- Department of Mechatronics Engineering, AMA International University, Salmabad, Bahrain
| | - M P Paulraj
- Department of Computer Science and Engineering, Sri Ramakrishna Institute of Technology, Coimbatore, Tamil Nadu, India
| | - Sazali Bin Yaacob
- Electrical, Electronic and Automation Section, Universiti Kuala Lumpur Malaysian Spanish Institute, Kedah, Malaysia
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He Z, Li Z, Yang F, Wang L, Li J, Zhou C, Pan J. Advances in Multimodal Emotion Recognition Based on Brain-Computer Interfaces. Brain Sci 2020; 10:E687. [PMID: 33003397 PMCID: PMC7600724 DOI: 10.3390/brainsci10100687] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Revised: 09/19/2020] [Accepted: 09/26/2020] [Indexed: 11/16/2022] Open
Abstract
With the continuous development of portable noninvasive human sensor technologies such as brain-computer interfaces (BCI), multimodal emotion recognition has attracted increasing attention in the area of affective computing. This paper primarily discusses the progress of research into multimodal emotion recognition based on BCI and reviews three types of multimodal affective BCI (aBCI): aBCI based on a combination of behavior and brain signals, aBCI based on various hybrid neurophysiology modalities and aBCI based on heterogeneous sensory stimuli. For each type of aBCI, we further review several representative multimodal aBCI systems, including their design principles, paradigms, algorithms, experimental results and corresponding advantages. Finally, we identify several important issues and research directions for multimodal emotion recognition based on BCI.
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Affiliation(s)
- Zhipeng He
- School of Software, South China Normal University, Foshan 528225, China; (Z.H.); (F.Y.); (L.W.); (J.L.); (C.Z.)
| | - Zina Li
- School of Computer, South China Normal University, Guangzhou 510641, China;
| | - Fuzhou Yang
- School of Software, South China Normal University, Foshan 528225, China; (Z.H.); (F.Y.); (L.W.); (J.L.); (C.Z.)
| | - Lei Wang
- School of Software, South China Normal University, Foshan 528225, China; (Z.H.); (F.Y.); (L.W.); (J.L.); (C.Z.)
| | - Jingcong Li
- School of Software, South China Normal University, Foshan 528225, China; (Z.H.); (F.Y.); (L.W.); (J.L.); (C.Z.)
| | - Chengju Zhou
- School of Software, South China Normal University, Foshan 528225, China; (Z.H.); (F.Y.); (L.W.); (J.L.); (C.Z.)
| | - Jiahui Pan
- School of Software, South China Normal University, Foshan 528225, China; (Z.H.); (F.Y.); (L.W.); (J.L.); (C.Z.)
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Follis JL, Lai D. Variability analysis of epileptic EEG using the maximal overlap discrete wavelet transform. Health Inf Sci Syst 2020; 8:26. [PMID: 32999715 DOI: 10.1007/s13755-020-00118-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Accepted: 09/02/2020] [Indexed: 11/29/2022] Open
Abstract
Purpose To determine if there is a difference in the wavelet variances of seizure and non-seizure channels in the EEG of an epileptic subject. Methods A six-level decomposition was applied using the Maximal Overlap Discrete Wavelet Transform (MODWT). The wavelet variance and 95% CIs were calculated for each level of the decomposition. The number of changes in variance for each level were found using a change-point detection method of Whitcher. The Kruskal-Wallis test was used to determine if there were differences in the median number of change points within channels and across frequency bands (levels). Results No distinctive pattern was found for the wavelet variances to differentiate the seizure and non-seizure channels. The seizure channels tended to have lower variances for each level and overall, but this pattern only held for one of the three seizure channels (RAST4). The median number of change points did not differ between the seizure and non-seizure channels either within each channel or across the frequency bands. Conclusion The use of the MODWT in examining the variances and changes in variance did not show specific patterns which differentiate between seizure and non-seizure channels.
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Affiliation(s)
- Jack L Follis
- Department of Mathematics and Computer Science, University of St. Thomas, 3800 Montrose Boulevard, Houston, TX 77006 USA
| | - Dejian Lai
- Department of Biostatistics and Data Science, The University of Texas Health Science Center at Houston, School of Public Health, 1200 Herman Pressler Drive, W-1008, Houston, TX 77030 USA
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40
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Scalp EEG classification using deep Bi-LSTM network for seizure detection. Comput Biol Med 2020; 124:103919. [DOI: 10.1016/j.compbiomed.2020.103919] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2020] [Revised: 06/29/2020] [Accepted: 07/14/2020] [Indexed: 11/15/2022]
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Zhang K, Xu G, Han Z, Ma K, Zheng X, Chen L, Duan N, Zhang S. Data Augmentation for Motor Imagery Signal Classification Based on a Hybrid Neural Network. SENSORS (BASEL, SWITZERLAND) 2020; 20:E4485. [PMID: 32796607 PMCID: PMC7474427 DOI: 10.3390/s20164485] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 07/27/2020] [Accepted: 08/05/2020] [Indexed: 01/22/2023]
Abstract
As an important paradigm of spontaneous brain-computer interfaces (BCIs), motor imagery (MI) has been widely used in the fields of neurological rehabilitation and robot control. Recently, researchers have proposed various methods for feature extraction and classification based on MI signals. The decoding model based on deep neural networks (DNNs) has attracted significant attention in the field of MI signal processing. Due to the strict requirements for subjects and experimental environments, it is difficult to collect large-scale and high-quality electroencephalogram (EEG) data. However, the performance of a deep learning model depends directly on the size of the datasets. Therefore, the decoding of MI-EEG signals based on a DNN has proven highly challenging in practice. Based on this, we investigated the performance of different data augmentation (DA) methods for the classification of MI data using a DNN. First, we transformed the time series signals into spectrogram images using a short-time Fourier transform (STFT). Then, we evaluated and compared the performance of different DA methods for this spectrogram data. Next, we developed a convolutional neural network (CNN) to classify the MI signals and compared the classification performance of after DA. The Fréchet inception distance (FID) was used to evaluate the quality of the generated data (GD) and the classification accuracy, and mean kappa values were used to explore the best CNN-DA method. In addition, analysis of variance (ANOVA) and paired t-tests were used to assess the significance of the results. The results showed that the deep convolutional generative adversarial network (DCGAN) provided better augmentation performance than traditional DA methods: geometric transformation (GT), autoencoder (AE), and variational autoencoder (VAE) (p < 0.01). Public datasets of the BCI competition IV (datasets 1 and 2b) were used to verify the classification performance. Improvements in the classification accuracies of 17% and 21% (p < 0.01) were observed after DA for the two datasets. In addition, the hybrid network CNN-DCGAN outperformed the other classification methods, with average kappa values of 0.564 and 0.677 for the two datasets.
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Affiliation(s)
- Kai Zhang
- School of Mechanical Engineering, Xi’an Jiaotong University, Xi’an 710049, China; (K.Z.); (Z.H.); (K.M.); (X.Z.); (L.C.); (N.D.); (S.Z.)
| | - Guanghua Xu
- School of Mechanical Engineering, Xi’an Jiaotong University, Xi’an 710049, China; (K.Z.); (Z.H.); (K.M.); (X.Z.); (L.C.); (N.D.); (S.Z.)
- State Key Laboratory for Manufacturing Systems Engineering, Xi’an Jiaotong University, Xi’an 710049, China
| | - Zezhen Han
- School of Mechanical Engineering, Xi’an Jiaotong University, Xi’an 710049, China; (K.Z.); (Z.H.); (K.M.); (X.Z.); (L.C.); (N.D.); (S.Z.)
| | - Kaiquan Ma
- School of Mechanical Engineering, Xi’an Jiaotong University, Xi’an 710049, China; (K.Z.); (Z.H.); (K.M.); (X.Z.); (L.C.); (N.D.); (S.Z.)
| | - Xiaowei Zheng
- School of Mechanical Engineering, Xi’an Jiaotong University, Xi’an 710049, China; (K.Z.); (Z.H.); (K.M.); (X.Z.); (L.C.); (N.D.); (S.Z.)
| | - Longting Chen
- School of Mechanical Engineering, Xi’an Jiaotong University, Xi’an 710049, China; (K.Z.); (Z.H.); (K.M.); (X.Z.); (L.C.); (N.D.); (S.Z.)
| | - Nan Duan
- School of Mechanical Engineering, Xi’an Jiaotong University, Xi’an 710049, China; (K.Z.); (Z.H.); (K.M.); (X.Z.); (L.C.); (N.D.); (S.Z.)
| | - Sicong Zhang
- School of Mechanical Engineering, Xi’an Jiaotong University, Xi’an 710049, China; (K.Z.); (Z.H.); (K.M.); (X.Z.); (L.C.); (N.D.); (S.Z.)
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Kant P, Laskar SH, Hazarika J, Mahamune R. CWT Based Transfer Learning for Motor Imagery Classification for Brain computer Interfaces. J Neurosci Methods 2020; 345:108886. [PMID: 32730917 DOI: 10.1016/j.jneumeth.2020.108886] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Revised: 07/25/2020] [Accepted: 07/25/2020] [Indexed: 11/18/2022]
Abstract
BACKGROUND The processing of brain signals for Motor imagery (MI) classification to have better accuracy is a key issue in the Brain-Computer Interface (BCI). While conventional methods like Artificial neural network (ANN), Linear discernment analysis (LDA), K-Nearest Neighbor (KNN), Support vector machine (SVM), etc. have made significant progress in terms of classification accuracy, deep transfer learning-based systems have shown the potential to outperform them. BCI can play a vital role in enabling communication with the external world for persons with motor disabilities. NEW METHODS Deep learning has been a success in many fields. However, for Electroencephalogram (EEG) signals, relatively minimal work has been carried out using deep learning. This paper proposes a combination of Continuous Wavelet Transform (CWT) along with deep learning-based transfer learning to solve the problem. CWT transforms one dimensional EEG signals into two-dimensional time-frequency-amplitude representation enabling us to exploit available deep networks through transfer learning. RESULTS The effectiveness of the proposed approach is evaluated in this study using an openly available BCI competition data-set. The results of the approach have been compared to earlier works on the same dataset, and a promising validation accuracy of 95.71% is achieved in our investigation. COMPARISON WITH EXISTING METHODS AND CONCLUSION Our approach has shown significant improvement over other studies, which is 5.71% improvement over earlier reported algorithm (Tabar and Halici, 2017) using the same dataset. Results show the validity of the proposed Deep Transfer-Learning based technique as a state of the art technique for MI classification in BCI.
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Affiliation(s)
- Piyush Kant
- Department of Electronics and Instrumentation Engineering, National Institute of Technology, Silchar 788010, Assam, India.
| | - Shahedul Haque Laskar
- Department of Electronics and Instrumentation Engineering, National Institute of Technology, Silchar 788010, Assam, India
| | - Jupitara Hazarika
- Department of Electronics and Instrumentation Engineering, National Institute of Technology, Silchar 788010, Assam, India
| | - Rupesh Mahamune
- Department of Electronics and Instrumentation Engineering, National Institute of Technology, Silchar 788010, Assam, India
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Sharan RV, Berkovsky S. Epileptic Seizure Detection Using Multi-Channel EEG Wavelet Power Spectra and 1-D Convolutional Neural Networks. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2020:545-548. [PMID: 33018047 DOI: 10.1109/embc44109.2020.9176243] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The use of feature extraction and selection from EEG signals has shown to be useful in the detection of epileptic seizure segments. However, these traditional methods have more recently been surpassed by deep learning techniques, forgoing the need for complex feature engineering. This work aims to extend the conventional approach of epileptic seizure detection utilizing raw power spectra of EEG signals and convolutional neural networks (CNN). The proposed technique utilizes wavelet transform to compute the frequency characteristics of multi-channel EEG signals. The EEG signals are divided into 2 second epochs and frequency spectrum up to a cutoff frequency of 45 Hz is computed. This multi-channel raw spectral data forms the input to a one-dimensional CNN (1-D CNN). Spectral data from the current, previous, and next epochs is utilized for predicting the label of the current epoch. The performance of the technique is evaluated using a dataset of EEG signals from 24 cases. The proposed method achieves an accuracy of 97.25% in detecting epileptic seizure segments. This result shows that multi-channel EEG wavelet power spectra and 1-D CNN are useful in detecting epileptic seizures.
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Real-time Inference and Detection of Disruptive EEG Networks for Epileptic Seizures. Sci Rep 2020; 10:8653. [PMID: 32457378 PMCID: PMC7251100 DOI: 10.1038/s41598-020-65401-6] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Accepted: 04/24/2020] [Indexed: 12/21/2022] Open
Abstract
Recent studies in brain science and neurological medicine paid a particular attention to develop machine learning-based techniques for the detection and prediction of epileptic seizures with electroencephalogram (EEG). As a noninvasive monitoring method to record brain electrical activities, EEG has been widely used for capturing the underlying dynamics of disruptive neuronal responses across the brain in real-time to provide clinical guidance in support of epileptic seizure treatments in practice. In this study, we introduce a novel dynamic learning method that first infers a time-varying network constituted by multivariate EEG signals, which represents the overall dynamics of the brain network, and subsequently quantifies its topological property using graph theory. We demonstrate the efficacy of our learning method to detect relatively strong synchronization (characterized by the algebraic connectivity metric) caused by abnormal neuronal firing during a seizure onset. The computational results for a realistic scalp EEG database show a detection rate of 93.6% and a false positive rate of 0.16 per hour (FP/h); furthermore, our method observes potential pre-seizure phenomena in some cases.
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Dodia S, Edla DR, Bablani A, Cheruku R. Lie detection using extreme learning machine: A concealed information test based on short‐time Fourier transform and binary bat optimization using a novel fitness function. Comput Intell 2020. [DOI: 10.1111/coin.12256] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Shubham Dodia
- Department of Computer Science and EngineeringNational Institute of Technology Goa India
| | - Damodar R. Edla
- Department of Computer Science and EngineeringNational Institute of Technology Goa India
| | - Annushree Bablani
- Department of Computer Science and EngineeringNational Institute of Technology Goa India
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Geng M, Zhou W, Liu G, Li C, Zhang Y. Epileptic Seizure Detection Based on Stockwell Transform and Bidirectional Long Short-Term Memory. IEEE Trans Neural Syst Rehabil Eng 2020; 28:573-580. [PMID: 31940545 DOI: 10.1109/tnsre.2020.2966290] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Automatic seizure detection plays a significant role in monitoring and diagnosis of epilepsy. This paper presents an efficient automatic seizure detection method based on Stockwell transform (S-transform) and bidirectional long short-term memory (BiLSTM) neural networks for intracranial EEG recordings. First, S-transform is applied to raw EEG segments, and the obtained matrix is grouped into time-frequency blocks as the inputs fed into BiLSTM for feature selecting and classification. Afterwards, postprocessing is adopted to improve detection performance, which includes moving average filter, threshold judgment, multichannel fusion, and collar technique. A total of 689 h intracranial EEG recordings from 20 patients are used for evaluation of the proposed system. Segment-based assessment results show that our system achieves a sensitivity of 98.09% and specificity of 98.69%. For the event-based evaluation, a sensitivity of 96.3% and a false detection rate of 0.24/h are yielded. The satisfactory results indicate that this seizure detection approach possess promising potential for clinical practice.
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al-Qerem A, Kharbat F, Nashwan S, Ashraf S, blaou K. General model for best feature extraction of EEG using discrete wavelet transform wavelet family and differential evolution. INTERNATIONAL JOURNAL OF DISTRIBUTED SENSOR NETWORKS 2020; 16:155014772091100. [DOI: 10.1177/1550147720911009] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2025]
Abstract
Wavelet family and differential evolution are proposed for categorization of epilepsy cases based on electroencephalogram (EEG) signals. Discrete wavelet transform is widely used in feature extraction step because it efficiently works in this field, as confirmed by the results of previous studies. The feature selection step is used to minimize dimensionality by excluding irrelevant features. This step is conducted using differential evolution. This article presents an efficient model for EEG classification by considering feature extraction and selection. Seven different types of common wavelets were tested in our research work. These are Discrete Meyer (dmey), Reverse biorthogonal (rbio), Biorthogonal (bior), Daubechies (db), Symlets (sym), Coiflets (coif), and Haar (Haar). Several kinds of discrete wavelet transform are used to produce a wide variety of features. Afterwards, we use differential evolution to choose appropriate features that will achieve the best performance of signal classification. For classification step, we have used Bonn databases to build the classifiers and test their performance. The results prove the effectiveness of the proposed model.
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Affiliation(s)
- Ahmad al-Qerem
- Department of Computer Science, King Hussein School of Computing Sciences, Princess Sumaya University for Technology, Amman, Jordan
- Department of Computer Science, Faculty of Information Technology, Zarqa University, Zarqa, Jordan
| | - Faten Kharbat
- College of Engineering, Al Ain University, Abu Dhabi, UAE
| | - Shadi Nashwan
- Department of Computer Science, College of Computer and Information Sciences, Jouf University, Sakaka, Saudi Arabia
| | - Staish Ashraf
- Department of Computer Science, COMSATs University Islamabad, Islamabad, Pakistan
| | - khairi blaou
- Department of Computer Science, Faculty of Information Technology, Zarqa University, Zarqa, Jordan
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Heydari Beni N, Foodeh R, Shalchyan V, Daliri MR. Force decoding using local field potentials in primary motor cortex: PLS or Kalman filter regression? AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2020; 43:10.1007/s13246-019-00833-7. [PMID: 31898242 DOI: 10.1007/s13246-019-00833-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Accepted: 12/09/2019] [Indexed: 11/30/2022]
Abstract
The development of brain-computer interface (BCI) systems is an important approach in brain studies. Control of communication devices and prostheses in real-world scenarios requires complex movement parameters. Decoding a variety of neural signals captured by micro-wire arrays is a potential applicant for extracting movement-related information. The present work was conducted to compare the functionality of partial least square (PLS) regression and Kalman filter to predict the force parameter from local field potential (LFP) signals of the primary motor cortex (M1). The signals were recorded using a 16-channel micro-wire array from the forelimb-related area of the M1 of three rats performing a behavioral task in which the force signal of the rat's forelimb paw was generated. Our results show that PLS regression and Kalman filters with the mean performance of 0.75 and 0.72 in terms of the correlation coefficient (CC) and 0.37 and 0.48 in terms of normalized mean square error (NMSE), respectively, are effective methods for decoding the force parameter from LFPs. Kalman filter underperforms PLS both in performance and speed. Although adding nonlinearity to the Kalman filter results in equally accurate CC performance as PLS, it has even more computational cost. Therefore, it is inferred that nonlinear methods do not necessarily have better functionality than linear ones and PLS, as a simple fast linear method could be an effectively applicable regression technique for BCIs.
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Affiliation(s)
- Nargess Heydari Beni
- Neuroscience and Neuroengineering Research Lab, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Narmak, 16846-13114, Tehran, Iran
- Engineering Bionics Lab, Department of Systems Design Engineering, University of Waterloo, Waterloo, Canada
| | - Reza Foodeh
- Neuroscience and Neuroengineering Research Lab, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Narmak, 16846-13114, Tehran, Iran
| | - Vahid Shalchyan
- Neuroscience and Neuroengineering Research Lab, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Narmak, 16846-13114, Tehran, Iran
| | - Mohammad Reza Daliri
- Neuroscience and Neuroengineering Research Lab, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Narmak, 16846-13114, Tehran, Iran.
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Manshouri N, Maleki M, Kayikcioglu T. An EEG-based stereoscopic research of the PSD differences in pre and post 2D&3D movies watching. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2019.101642] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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50
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Grabat SA, Ashour AS, Elnaby MMA, El-Samie FEA. S-Transform-Based Electroencephalography Seizure Detection and Prediction. 2019 7TH INTERNATIONAL JAPAN-AFRICA CONFERENCE ON ELECTRONICS, COMMUNICATIONS, AND COMPUTATIONS, (JAC-ECC) 2019. [DOI: 10.1109/jac-ecc48896.2019.9051320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
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