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For: Wang P, Robert L, Pelletier J, Dang WL, Taddei F, Wright A, Jun S. Robust growth of Escherichia coli. Curr Biol 2010;20:1099-103. [PMID: 20537537 PMCID: PMC2902570 DOI: 10.1016/j.cub.2010.04.045] [Citation(s) in RCA: 647] [Impact Index Per Article: 43.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2010] [Revised: 04/18/2010] [Accepted: 04/19/2010] [Indexed: 10/19/2022]
Number Cited by Other Article(s)
1
Sutcliffe EI, Irvine A, Rooney J, Smith D, Northcote HM, McKenzie D, Bakshi S, Nisbet AJ, Price D, Graham R, Morphew R, Atkinson L, Mousley A, Cantacessi C. Antimicrobial peptides in nematode secretions - Unveiling biotechnological opportunities for therapeutics and beyond. Biotechnol Adv 2025;81:108572. [PMID: 40154760 DOI: 10.1016/j.biotechadv.2025.108572] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2024] [Revised: 03/02/2025] [Accepted: 03/25/2025] [Indexed: 04/01/2025]
2
Chen S, Wang Y, Da Zhou, Hu J. Bayesian Inference of Phenotypic Plasticity of Cancer Cells Based on Dynamic Model for Temporal Cell Proportion Data. Biom J 2025;67:e70055. [PMID: 40298362 DOI: 10.1002/bimj.70055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2024] [Revised: 09/18/2024] [Accepted: 10/31/2024] [Indexed: 04/30/2025]
3
Vareschi S, Jaut V, Vijay S, Allen RJ, Schreiber F. Antimicrobial efflux and biofilms: an interplay leading to emergent resistance evolution. Trends Microbiol 2025:S0966-842X(25)00123-4. [PMID: 40410028 DOI: 10.1016/j.tim.2025.04.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2025] [Revised: 04/15/2025] [Accepted: 04/16/2025] [Indexed: 05/25/2025]
4
Alnahhas RN, Andreani V, Dunlop MJ. Evaluating the predictive power of combined gene expression dynamics from single cells on antibiotic survival. mSystems 2025:e0158824. [PMID: 40391890 DOI: 10.1128/msystems.01588-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2024] [Accepted: 04/16/2025] [Indexed: 05/22/2025]  Open
5
Nieto C, Vargas-García CA, Singh A. A generalized adder for cell size homeostasis: Effects on stochastic clonal proliferation. Biophys J 2025;124:1376-1386. [PMID: 40119521 DOI: 10.1016/j.bpj.2025.03.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2024] [Revised: 02/02/2025] [Accepted: 03/17/2025] [Indexed: 03/24/2025]  Open
6
Olayé J, Bouzidi H, Aristov A, Barizien A, Gutiérrez Ramos S, Baroud C, Bansaye V. Estimation of the lifetime distribution from fluctuations in Bellman-Harris processes. J Math Biol 2025;90:56. [PMID: 40327121 DOI: 10.1007/s00285-025-02219-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 03/31/2025] [Accepted: 04/06/2025] [Indexed: 05/07/2025]
7
O’Connor OM, Dunlop MJ. Cell-TRACTR: A transformer-based model for end-to-end segmentation and tracking of cells. PLoS Comput Biol 2025;21:e1013071. [PMID: 40408631 PMCID: PMC12101859 DOI: 10.1371/journal.pcbi.1013071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2024] [Accepted: 04/21/2025] [Indexed: 05/25/2025]  Open
8
Quinn LK, Sharma K, Faber KT, Orphan VJ. Clear as mud redefined: Tunable transparent mineral scaffolds for visualizing microbial processes below ground. PNAS NEXUS 2025;4:pgaf118. [PMID: 40352645 PMCID: PMC12063488 DOI: 10.1093/pnasnexus/pgaf118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/05/2024] [Accepted: 03/31/2025] [Indexed: 05/14/2025]
9
Schiraldi A. Short- and Long-Term Evolution of Microbial Cultures: A Thermodynamic Perspective. Int J Mol Sci 2025;26:4187. [PMID: 40362424 PMCID: PMC12071856 DOI: 10.3390/ijms26094187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2025] [Revised: 04/21/2025] [Accepted: 04/25/2025] [Indexed: 05/15/2025]  Open
10
Eremina A, Schwall C, Saez T, Witting L, Kohlheyer D, Martins BMC, Thomas P, Locke JCW. Environmental and molecular noise buffering by the cyanobacterial clock in individual cells. Nat Commun 2025;16:3566. [PMID: 40234415 PMCID: PMC12000584 DOI: 10.1038/s41467-025-58169-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Accepted: 03/11/2025] [Indexed: 04/17/2025]  Open
11
Cylke A, Banerjee S. Mechanistic basis for non-exponential bacterial growth. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.03.29.646116. [PMID: 40236093 PMCID: PMC11996336 DOI: 10.1101/2025.03.29.646116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/17/2025]
12
Proenca AM, Rang CU, Chao L. A link between aging and persistence. Antimicrob Agents Chemother 2025;69:e0131324. [PMID: 39982072 PMCID: PMC11963536 DOI: 10.1128/aac.01313-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2024] [Accepted: 01/28/2025] [Indexed: 02/22/2025]  Open
13
Espinoza Miranda SS, Abbaszade G, Hess WR, Drescher K, Saliba AE, Zaburdaev V, Chai L, Dreisewerd K, Grünberger A, Westendorf C, Müller S, Mascher T. Resolving spatiotemporal dynamics in bacterial multicellular populations: approaches and challenges. Microbiol Mol Biol Rev 2025;89:e0013824. [PMID: 39853129 PMCID: PMC11948493 DOI: 10.1128/mmbr.00138-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2025]  Open
14
Joesaar A, Holub M, Lutze L, Emanuele M, Kerssemakers J, Pabst M, Dekker C. A microfluidic platform for extraction and analysis of bacterial genomic DNA. LAB ON A CHIP 2025;25:1767-1775. [PMID: 40026014 PMCID: PMC11873781 DOI: 10.1039/d4lc00839a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/04/2024] [Accepted: 02/23/2025] [Indexed: 03/04/2025]
15
Hobson-Gutierrez S, Kussell E. Evolutionary Advantage of Cell Size Control. PHYSICAL REVIEW LETTERS 2025;134:118401. [PMID: 40192351 DOI: 10.1103/physrevlett.134.118401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Accepted: 01/24/2025] [Indexed: 04/25/2025]
16
Papagiannakis A, Yu Q, Govers SK, Lin WH, Wingreen NS, Jacobs-Wagner C. Nonequilibrium polysome dynamics promote chromosome segregation and its coupling to cell growth in Escherichia coli. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2024.10.08.617237. [PMID: 40161845 PMCID: PMC11952301 DOI: 10.1101/2024.10.08.617237] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
17
Mobaraki M, Deng C, Zheng J, Li H. Yeast aging from a dynamic systems perspective: Analysis of single cell trajectories reveals significant interplay between nuclear size scaling, proteasome dynamics, and mitochondrial morphology. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.03.11.642143. [PMID: 40161634 PMCID: PMC11952390 DOI: 10.1101/2025.03.11.642143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
18
Kumar S, Inns PG, Ward S, Lagage V, Wang J, Kaminska R, Booth MJ, Uphoff S, Cohen EAK, Mamou G, Kleanthous C. Immobile lipopolysaccharides and outer membrane proteins differentially segregate in growing Escherichia coli. Proc Natl Acad Sci U S A 2025;122:e2414725122. [PMID: 40030021 PMCID: PMC11912417 DOI: 10.1073/pnas.2414725122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2024] [Accepted: 01/07/2025] [Indexed: 03/19/2025]  Open
19
Genthon A. From noisy cell size control to population growth: When variability can be beneficial. Phys Rev E 2025;111:034407. [PMID: 40247490 DOI: 10.1103/physreve.111.034407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2024] [Accepted: 02/19/2025] [Indexed: 04/19/2025]
20
Rossine F, Sanchez C, Eaton D, Paulsson J, Baym M. Intracellular competition shapes plasmid population dynamics. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.02.19.639193. [PMID: 40027608 PMCID: PMC11870584 DOI: 10.1101/2025.02.19.639193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 03/05/2025]
21
Teo AJT, Gu J, Govyadinov A, Kornilovitch P, Wang P, Goh S, Tung NT, Peng Z, Koh K, Li KHH. Development of a Mass-Producible Microfluidic Device for Single and Bulk Mycobacteria Investigations. BIOSENSORS 2025;15:108. [PMID: 39997010 PMCID: PMC11853077 DOI: 10.3390/bios15020108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/27/2024] [Revised: 01/23/2025] [Accepted: 01/27/2025] [Indexed: 02/26/2025]
22
Pavlou A, Cinquemani E, Pinel C, Giordano N, Mathilde VMG, Mihalcescu I, Geiselmann J, de Jong H. Single-cell data reveal heterogeneity of investment in ribosomes across a bacterial population. Nat Commun 2025;16:285. [PMID: 39746998 PMCID: PMC11695989 DOI: 10.1038/s41467-024-55394-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Accepted: 12/10/2024] [Indexed: 01/04/2025]  Open
23
Chong SW, Shen Y, Palomba S, Vigolo D. Nanofluidic Lab-On-A-Chip Systems for Biosensing in Healthcare. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2025;21:e2407478. [PMID: 39491535 DOI: 10.1002/smll.202407478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2024] [Revised: 10/21/2024] [Indexed: 11/05/2024]
24
Golchin A, Shams F, Moradi F, Sadrabadi AE, Parviz S, Alipour S, Ranjbarvan P, Hemmati Y, Rahnama M, Rasmi Y, Aziz SGG. Single-cell Technology in Stem Cell Research. Curr Stem Cell Res Ther 2025;20:9-32. [PMID: 38243989 DOI: 10.2174/011574888x265479231127065541] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 09/23/2023] [Accepted: 10/04/2023] [Indexed: 01/22/2024]
25
Nakaoka H. Live Imaging of Fission Yeast Single-Cell Lineages Using a Microfluidic Device. Methods Mol Biol 2025;2862:61-76. [PMID: 39527193 DOI: 10.1007/978-1-0716-4168-2_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2024]
26
Sahm A, Riege K, Groth M, Bens M, Kraus J, Fischer M, Kestler H, Englert C, Schaible R, Platzer M, Hoffmann S. Hydra has mammal-like mutation rates facilitating fast adaptation despite its nonaging phenotype. Genome Res 2024;34:2217-2228. [PMID: 39632086 PMCID: PMC11694757 DOI: 10.1101/gr.279025.124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Accepted: 10/18/2024] [Indexed: 12/07/2024]
27
Mäkelä J, Papagiannakis A, Lin WH, Lanz MC, Glenn S, Swaffer M, Marinov GK, Skotheim JM, Jacobs-Wagner C. Genome concentration limits cell growth and modulates proteome composition in Escherichia coli. eLife 2024;13:RP97465. [PMID: 39714909 DOI: 10.7554/elife.97465] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2024]  Open
28
Sidor LM, Beaulieu MM, Rasskazov I, Acarturk BC, Ren J, Jenen E, Kamoen L, Vitali MV, Carney PS, Schmidt GR, Srubar WV, Abbondanzieri EA, Meyer AS. Engineered bacteria that self-assemble bioglass polysilicate coatings display enhanced light focusing. Proc Natl Acad Sci U S A 2024;121:e2409335121. [PMID: 39656206 DOI: 10.1073/pnas.2409335121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Accepted: 10/17/2024] [Indexed: 12/18/2024]  Open
29
Campey A, Łapińska U, Chait R, Tsaneva-Atanasova K, Pagliara S. Antibiotic resistant bacteria survive treatment by doubling while shrinking. mBio 2024;15:e0237524. [PMID: 39565111 PMCID: PMC11633386 DOI: 10.1128/mbio.02375-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2024] [Accepted: 10/22/2024] [Indexed: 11/21/2024]  Open
30
Blassick CM, Lugagne JB, Dunlop MJ. Dynamic heterogeneity in an E. coli stress response regulon mediates gene activation and antimicrobial peptide tolerance. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.11.27.625634. [PMID: 39677761 PMCID: PMC11642793 DOI: 10.1101/2024.11.27.625634] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2024]
31
Chung ES, Kar P, Kamkaew M, Amir A, Aldridge BB. Single-cell imaging of the Mycobacterium tuberculosis cell cycle reveals linear and heterogenous growth. Nat Microbiol 2024;9:3332-3344. [PMID: 39548343 PMCID: PMC11602732 DOI: 10.1038/s41564-024-01846-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 10/03/2024] [Indexed: 11/17/2024]
32
Ripandelli RA, Mueller SH, Robinson A, van Oijen AM. A Single-Cell Interrogation System from Scratch: Microfluidics and Deep Learning. J Phys Chem B 2024;128:11501-11515. [PMID: 39547656 PMCID: PMC11613446 DOI: 10.1021/acs.jpcb.4c02745] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Revised: 09/08/2024] [Accepted: 09/10/2024] [Indexed: 11/17/2024]
33
Alnahhas RN, Andreani V, Dunlop MJ. Evaluating the predictive power of combined gene expression dynamics from single cells on antibiotic survival. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.11.23.624989. [PMID: 39651301 PMCID: PMC11623535 DOI: 10.1101/2024.11.23.624989] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2024]
34
Keating C, Fiege K, Diender M, Sousa DZ, Villanueva L. Microbial single-cell applications under anoxic conditions. Appl Environ Microbiol 2024;90:e0132124. [PMID: 39345115 PMCID: PMC11577760 DOI: 10.1128/aem.01321-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/01/2024]  Open
35
Chao L, Chan CK, Shi C, Rang UC. Spatial and temporal distribution of ribosomes in single cells reveals aging differences between old and new daughters of Escherichia coli. eLife 2024;12:RP89543. [PMID: 39565213 DOI: 10.7554/elife.89543] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2024]  Open
36
Proenca AM, Tuğrul M, Nath A, Steiner UK. Progressive decline in old pole gene expression signal enhances phenotypic heterogeneity in bacteria. SCIENCE ADVANCES 2024;10:eadp8784. [PMID: 39514668 PMCID: PMC11546803 DOI: 10.1126/sciadv.adp8784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2024] [Accepted: 10/07/2024] [Indexed: 11/16/2024]
37
Wang Q, Wang J, Chen YP, Shen Y, Yan P. Scavenging of reactive oxygen species in Candidatus Brocadia fulgida through nanocompartments. BIORESOURCE TECHNOLOGY 2024;411:131348. [PMID: 39182796 DOI: 10.1016/j.biortech.2024.131348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2024] [Revised: 08/22/2024] [Accepted: 08/22/2024] [Indexed: 08/27/2024]
38
Ripandelli RA, van Oijen AM, Robinson A. Single-Cell Microfluidics: A Primer for Microbiologists. J Phys Chem B 2024;128:10311-10328. [PMID: 39400277 PMCID: PMC11514030 DOI: 10.1021/acs.jpcb.4c02746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 08/01/2024] [Accepted: 08/05/2024] [Indexed: 10/15/2024]
39
Pollack-Milgate S, Saitia S, Tang JX. Rapid growth rate of Enterobacter sp. SM3 determined using several methods. BMC Microbiol 2024;24:403. [PMID: 39390418 PMCID: PMC11465882 DOI: 10.1186/s12866-024-03547-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Accepted: 09/25/2024] [Indexed: 10/12/2024]  Open
40
Ritz D, Deng Y, Schultz D. Common regulatory mutation increases single-cell survival to antibiotic exposures in Pseudomonas aeruginosa. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.09.20.614194. [PMID: 39345531 PMCID: PMC11430049 DOI: 10.1101/2024.09.20.614194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 10/01/2024]
41
Liguori F, Pellicciotta N, Milanetti E, Xi Windemuth S, Ruocco G, Di Leonardo R, Danino T. Dynamic Gene Expression Mitigates Mutational Escape in Lysis-Driven Bacteria Cancer Therapy. BIODESIGN RESEARCH 2024;6:0049. [PMID: 39301524 PMCID: PMC11411163 DOI: 10.34133/bdr.0049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2024] [Revised: 08/09/2024] [Accepted: 08/25/2024] [Indexed: 09/22/2024]  Open
42
Atasoy M, Bartkova S, Çetecioğlu-Gürol Z, P Mira N, O'Byrne C, Pérez-Rodríguez F, Possas A, Scheler O, Sedláková-Kaduková J, Sinčák M, Steiger M, Ziv C, Lund PA. Methods for studying microbial acid stress responses: from molecules to populations. FEMS Microbiol Rev 2024;48:fuae015. [PMID: 38760882 PMCID: PMC11418653 DOI: 10.1093/femsre/fuae015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 03/27/2024] [Accepted: 05/16/2024] [Indexed: 05/20/2024]  Open
43
Hardo G, Li R, Bakshi S. Quantitative microbiology with widefield microscopy: navigating optical artefacts for accurate interpretations. NPJ IMAGING 2024;2:26. [PMID: 39234390 PMCID: PMC11368818 DOI: 10.1038/s44303-024-00024-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/11/2024] [Accepted: 06/21/2024] [Indexed: 09/06/2024]
44
Zhao X, Ying J, Wang Z, Wang Y, Li Z, Gu T, Liu S, Li Y, Liu B, Xin F, Wen B. In vitro digestive properties and the bioactive effect of walnut green husk on human gut microbiota. Front Microbiol 2024;15:1392774. [PMID: 39224223 PMCID: PMC11367867 DOI: 10.3389/fmicb.2024.1392774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 07/31/2024] [Indexed: 09/04/2024]  Open
45
Boesen TO, Charbon G, Fu H, Jensen C, Sandler M, Jun S, Løbner-Olesen A. Dispensability of extrinsic DnaA regulators in Escherichia coli cell-cycle control. Proc Natl Acad Sci U S A 2024;121:e2322772121. [PMID: 40014855 PMCID: PMC11331064 DOI: 10.1073/pnas.2322772121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 06/26/2024] [Indexed: 03/01/2025]  Open
46
Ascensao JA, Lok K, Hallatschek O. Asynchronous abundance fluctuations can drive giant genotype frequency fluctuations. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.23.581776. [PMID: 38562700 PMCID: PMC10983864 DOI: 10.1101/2024.02.23.581776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
47
Le Quellec L, Aristov A, Gutiérrez Ramos S, Amselem G, Bos J, Baharoglu Z, Mazel D, Baroud CN. Measuring single-cell susceptibility to antibiotics within monoclonal bacterial populations. PLoS One 2024;19:e0303630. [PMID: 39088440 PMCID: PMC11293721 DOI: 10.1371/journal.pone.0303630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Accepted: 04/30/2024] [Indexed: 08/03/2024]  Open
48
Delprat M, Guarino R, Jordier N, Paulet É, Vedrine L, Aussel L. [Single-cell study in microbiology]. Med Sci (Paris) 2024;40:692-696. [PMID: 39303126 DOI: 10.1051/medsci/2024119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/22/2024]  Open
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Kollerová S, Jouvet L, Smelková J, Zunk-Parras S, Rodríguez-Rojas A, Steiner UK. Phenotypic resistant single-cell characteristics under recurring ampicillin antibiotic exposure in Escherichia coli. mSystems 2024;9:e0025624. [PMID: 38920373 PMCID: PMC11264686 DOI: 10.1128/msystems.00256-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Accepted: 05/20/2024] [Indexed: 06/27/2024]  Open
50
Ábrahám Á, Dér L, Csákvári E, Vizsnyiczai G, Pap I, Lukács R, Varga-Zsíros V, Nagy K, Galajda P. Single-cell level LasR-mediated quorum sensing response of Pseudomonas aeruginosa to pulses of signal molecules. Sci Rep 2024;14:16181. [PMID: 39003361 PMCID: PMC11246452 DOI: 10.1038/s41598-024-66706-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Accepted: 07/03/2024] [Indexed: 07/15/2024]  Open
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