Effect of soil properties, heavy metals and emerging contaminants in the soil nematodes diversity

Microbiological Mechanisms of Collaborative Remediation of Cadmium-Contaminated Soil with Bacillus cereus and Lawn Plants

Severe cadmium contamination poses a serious threat to food security and human health. Plant-microbial combined remediation represents a potential technique for reducing heavy metals in soil. The main objective of this study is to explore the remediation mechanism of cadmium-contaminated soil using a combined approach of lawn plants and microbes. The target bacterium Bacillus cereus was selected from cadmium-contaminated soil in mining areas, and two lawn plants (Festuca arundinacea A'rid III' and Poa pratensis M'idnight II') were chosen as the target plants. We investigated the remediation effect of different concentrations of bacterial solution on cadmium-contaminated soil using two lawn plants through pot experiments, as well as the impact on the soil microbial community structure. The results demonstrate that Bacillus cereus promotes plant growth, and the combined action of lawn plants and Bacillus cereus improves soil quality, enhancing the bioavailability of cadmium in the soil. At a bacterial suspension concentration of 105 CFU/mL, the optimal remediation treatment was observed. The removal efficiency of cadmium in the soil under Festuca arundinacea and Poa pratensis treatments reached 33.69% and 33.33%, respectively. Additionally, the content of bioavailable cadmium in the rhizosphere soil increased by up to 13.43% and 26.54%, respectively. Bacillus cereus increased the bacterial diversity in the non-rhizosphere soil of both lawn plants but reduced it in the rhizosphere soil. Additionally, the relative abundance of Actinobacteriota and Firmicutes, which have potential for heavy metal remediation, increased after the application of the bacterial solution. This study demonstrates that Bacillus cereus can enhance the potential of lawn plants to remediate cadmium-contaminated soil and reshape the microbial communities in both rhizosphere and non-rhizosphere soils.

Heavy metal pollution triggers a shift from bacteria-based to fungi-based soil micro-food web: Evidence from an abandoned mining-smelting area

Heavy metals pose significant threats to soil biota, ultimately disrupting soil micro-food web. However, no studies have yet elucidated the impact of heavy metals on soil micro-food web. In this study, we explored the response of bacteria, fungi, nematodes, and soil micro-food web along a gradient of heavy metals in an abandoned smelting-mining area. We found that bacteria responded strongly to heavy metals, whereas fungi showed greater resistance and tolerance. Nematodes responses were less apparent. With the increasing levels of heavy metal pollution, the importance of heavy metal-tolerant organisms in micro-food webs increased significantly. For instance, the keystone bacteria in soil micro-food web shifted from copiotrophic to oligotrophic types, while the keystone nematodes shifted from to bacterial-feeding (e.g., Eucephalobus) to fungal-feeding species (e.g., Ditylenchus). Additionally, elevated heavy metal concentrations increased the proportion of fungi (e.g., Mortierellomycota), intensifying their interactions with bacteria and nematodes and causing a shift from bacteria-based to fungi-based soil micro-food web. Furthermore, heavy metal contamination induced a more complex and stable soil micro-food web. Overall, we highlight the changes in soil micro-food web as a mechanism for coping with heavy metal stress. Our study provides valuable insights into how heavy metal pollution can cause shifts in soil micro-food webs and has critical implications for enhancing our understanding of the ecological consequences of environmental pollution at the ecosystem level.

Characteristics and pollution risks of potentially toxic elements and nematode community structure on farm soil near coal mines

As one of the most important coal-producing provinces of China, Shanxi Province has been concerned about soil potentially toxic elements (PTEs) contamination in recent years. The study aimed to determine the status and sources of PTEs contamination and evaluate the quality of the soil ecology. This study investigated the degree of 13 PTEs contamination. The sources and contributions of PTEs were traced by the absolute principal component score followed by a multiple linear regression model (APCS-MLR). And the status of the soil ecosystem was verified by evaluating the soil nematode community around the coal mining areas in Jinzhong. The results showed that the mean PTEs concentration of 5 trace elements were higher than the background values of Shanxi, and safe to considerable was indicated by the pollution and ecological risk values. Soil Hg was the most contaminated element, followed by Cd. The distribution of PTEs was determined by coal mining activities (44.72%) followed by agricultural practice (32.37%) and coal transportation (21.37%). The nematode genera Acrobeloides (4.01%), Aphelenchus (20.30%), Meloidogyne (11.95%) and Aporcelaimus (2.74%) could be regarded as bioindicators of soil PTEs contamination by their tolerance. Concentrations of soil Cr, Mn, Ti and Cd showed remarkable influences on the total nematode abundance, maturity index, enrichment index, structural index, Shannon-Wiener diversity index and Pielou index of soil nematode. It is an appropriate method to evaluate the status of soil PTEs contamination combining the response of a single nematode genus and the nematode community evaluation index.

Combination of Biochar and Trichoderma harzianum Can Improve the Phytoremediation Efficiency of Brassica juncea and the Rhizosphere Micro-Ecology in Cadmium and Arsenic Contaminated Soil

Phytoremediation is an environment-friendly method for toxic elements remediation. The aim of this study was to improve the phytoremediation efficiency of Brassica juncea and the rhizosphere soil micro-ecology in cadmium (Cd) and arsenic (As) contaminated soil. A field experiment was conducted with six treatments, including a control treatment (CK), two treatments with two contents of Trichoderma harzianum (T1: 4.5 g m-2; T2: 9 g m-2), one biochar treatment (B: 750 g m-2), and two combined treatments of T1B and T2B. The results showed Trichoderma harzianum promoted the total chlorophyll and translocation factor of Brassica juncea, while biochar promoted plant biomass compared to CK. T2B treatment showed the best results, which significantly increased Cd accumulation by 187.49-308.92%, and As accumulation by 125.74-221.43%. As a result, the soil's total Cd content was reduced by 19.04% to 49.64% and total As contents by 38.76% to 53.77%. The combined amendment increased the contents of soil available potassium, phosphorus, nitrogen, and organic matter. Meanwhile, both the activity of glutathione and peroxidase enzymes in plants, together with urease and sucrase enzymes in soil, were increased. Firmicutes (dominant bacterial phylum) and Ascomycota (dominant fungal phylum) showed positive and close correlation with soil nutrients and plant potentially toxic elements contents. This study demonstrated that phytoremediation assisted by biochar and Trichoderma harzianum is an effective method of soil remediation and provides a new strategy for enhancing plant remediation efficiency.

Life in a Contaminated Environment: How Soil Nematodes Can Indicate Long-Term Heavy-Metal Pollution

We investigated the genera, trophic groups, and functional guilds of soil nematodes at five alluvial meadows along the Litavka River in the Czech Republic to assess their usefulness as indicators of heavy metal pollution in soils. The Litavka River flows around the waste-sedimentation pond of a smelter in the city of Příbram in the Central Bohemian Region. Lead, zinc, and arsenic are the main pollutants in the soils in the vicinity of the smelter. The alluvial meadows closest to the pond and mine waste were the most heavily polluted sites, and contamination decreased downstream along the river with increasing distance from the sources of pollution. The nematode communities were sensitive to pollution, with the most contaminated sites having considerably fewer nematode individuals, fewer genera, and a less diverse and more degraded food web with less nematode biomass. Arsenic, lead, and zinc contents were significantly negatively correlated with the numbers of bacterivores, predators, omnivores, plant parasites, and fungivores, which were significantly less abundant at highly polluted sites. This correlation suggests that nematode groups with higher c-p values, and those with c-p 1 and 2 designations, can be useful indicators of high heavy-metal contamination in areas polluted for a long time. In contrast, the abundance of c-p 3 plant parasitic nematodes was positively correlated with copper, nickel, and zinc contents and with soil-moisture content in the alluvial meadows. Maturity index (MI) and MI2-5 were the most sensitive indices of the degree of disturbance of the soil ecosystem, with enrichment index, structure index, and basal index indicating the altered decomposition channels and diminished structure of the food web.

Spatial Distribution and Assessment of the Human Health Risks of Heavy Metals in a Retired Pharmaceutical Industrial Area, Southwest China

Heavy metals pollution in pharmaceutical industries received increasing attention. A total of 94 soil samples were collected in this study. Results showed the mean contents of Hg, Cd, As, Pb, Ni and Cu were 0.21, 0.26, 9.59, 55.06, 51.52 and 50.81 mg·kg^-1, respectively. The spatial distribution of metals in topsoil largely attributed to the pharmaceutical production process. The distribution of Hg and As were related to the production of medical absorbent cotton. While Ni was related to the fuel supply of Ni-rich coal. Cr, Cu and Pb mainly distributed in the process which they were used as catalysts. The vertical migration of metals was complex in soil. To a great extent, it was related to the texture of the soil and the properties of metals in this filed. The total non-cancer and cancer human health risk were within the limits of USEPA (10^-6 a^-1). This demonstrated the health risks of individual's exposure to heavy metals in this factory was acceptable.

A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments - a Meta-analysis

Heavy metal (HM) accumulation in soil affects plants and soil fauna, yet the effect on microbial alpha-diversity remains unclear, mainly due to the absence of dedicated research synthesis (e.g. meta-analysis). Here, we report the first meta-analysis of the response of soil microbial alpha-diversity to the experimental addition of cadmium (Cd) and copper (Cu). We considered studies conducted between 2013 and 2022 using DNA metabarcoding of bacterial and fungal communities to overcome limitations of other cultivation- and electrophoresis-based techniques. Fungi were discarded due to the limited study number (i.e. 6 studies). Bacterial studies resulted in 66 independent experiments reported in 32 primary papers from four continents. We found a negative dose-dependent response for Cu but not for Cd for bacterial alpha-diversity in the environments, only for Cu additions exceeding 29.6 mg kg^-1 (first loss of - 0.06% at 30 mg kg^-1). The maximal loss of bacterial alpha-diversity registered was 13.89% at 3837 mg kg^-1. Our results first highlight that bacterial communities behave differently to soil pollution depending on the metal. Secondly, our study suggests that even extreme doses of Cu do not cause a dramatic loss in alpha-diversity, highlighting how the behaviour of bacterial communities diverges from soil macro-organisms.

Unraveling the occurrence of contaminants of emerging concern in groundwater from urban setting: A combined multidisciplinary approach and self-organizing maps

In recent decades, changes in human behavior and new technologies have introduced thousands of new compounds into the environment called "contaminants of emerging concern" (CEC). These compounds have been detected in different environmental compartments such as soil, surface water, air, and groundwater. The presence of these contaminants in groundwater may pose risks to human health when used as potable water. In some urban areas in Brazil, groundwater is normally consumed without previous treatment. This study aimed to use statistical analysis by self-organizing maps (SOM) to evaluate the trends of CEC in urban groundwater systems. A total of 23 CEC compounds including pesticides, pharmaceuticals, and hormones were determined in groundwater samples using solid phase extraction and liquid chromatography-mass spectrometry. The CEC most frequently detected were atrazine and degradation products, fipronil, simazine, tebuconazole, hexazinone, and caffeine in concentrations up to 300 ng L^-1. All studied compounds were detected in groundwater at least in one sample. Patterns in the data through SOM have shown a strong positive correlation between atrazine, hexazinone, simazine, tebuthiuron, 2-hydroxyatrazine, and 17β-estradiol. The hormones estrone and testosterone also show a positive correlation due to their similar chemical properties. On the other hand, caffeine was detected in 90% of the samples, likely due to a population habit of taking daily a hot drink made of yerba mate associated with low rates of treated domestic sewage in the study area.

Electrochemical sensing system for the analysis of emerging contaminants in aquatic environment: A review

This survey distinguishes understudied spaces of arising impurity research in wastewaters and the habitat, and suggests bearing for future checking. Thinking about the impeding effect of toxins on human wellbeing and biological system, their discovery in various media including water is fundamental. This review sums up and assesses the latest advances in the electrochemical detecting of emerging contaminants (ECs). This survey is expected to add to the advancement in electrochemical applications towards the ECs. Different electrochemical insightful procedures like Amperometry, Voltammetry has been examined in this overview. The improvement of cutting edge nanomaterial-based electrochemical sensors and biosensors for the discovery of drug compounds has accumulated monstrous consideration because of their benefits, like high affectability and selectivity, continuous observing, and convenience has been reviewed in this survey. This survey likewise features the diverse electrochemical treatment procedures accessible for the removal of ECs.

Nematodes as Ghosts of Land Use Past: Elucidating the Roles of Soil Nematode Community Studies as Indicators of Soil Health and Land Management Practices

Soil health is a matter of growing concern because of its degradation due to unsustainable anthropogenic activities over the last few decades. It is maintained by interactions among the components of the soil food web commonly concentrated in the vicinity of the plant roots, called the rhizosphere. The soil food web is dominated by nematodes. They occupy various trophic positions because of their diverse feeding habits. The free-living forms are mainly dependent on soil bacteria and fungi for their nutrition, while the parasitic forms feed on plant roots. The population of these two groups is regulated by the activities of predatory nematodes which can be carnivorous or omnivorous. The soil nematodes thereby partake responsibilities in nutrient cycling, mineralization and decomposition pathways which, in turn, affects the aboveground productivity. This intricately connected food web structure is vulnerable to disturbances like increased soil salinity, acidity, nitrogen enrichment, tillage, crop rotations, fertilizers, pesticides, soil amendment techniques and heavy metal pollution. The effects are reflected by alterations in the abundance and diversity of soil nematodes belonging to various trophic groups. These alterations have been formulated into measurable indices like maturity index (MI), structure index (SI), enrichment index (EI) and channel index (CI). The faunal profile and metabolic footprints of soil nematodes are latest developments in the field of nematode community analyses. Though these indices cannot replace the conventional soil ecotoxicological assays, they can give added information about soil biology which can be utilized to design sustainable land use practices.

Characterizing the spatial distributions of soil biota at a legacy base metal mine using environmental DNA

Characterizing the distribution of biota in response to contaminants is a critical element of site risk assessments. In this study we investigated the spatial distributions of biota and soil chemistry data in surface soil from Sunny Corner, a legacy base metal sulfide mine, Australia. Our results showed that copper (Cu), zinc (Zn), arsenic (As) and lead (Pb) in the surface soil exceeded Australian national soil quality guidelines and posed risks to the environment. Environmental (e)DNA metabarcoding of prokaryote and eukaryote composition confirmed the suggestion of environmental risk posed by these elements collectively explaining 72.9 % and 60.5 % of the total variation in the composition of soil prokaryotes and eukaryotes, respectively. Prokaryotic taxa from the phyla Gemmatimonadetes, Verrucomicrobia and Deinococcus-Thermus showed similar spatial patterns to As and Pb, and were positively correlated. Eukaryotic taxa from the phylum Chlorophyta had similar positive correlations with As and Pb in the soil. In contrast, Amoebozoa and Cercozoa, were sensitive to metals and metalloids, having higher relative abundances in soils with lower concentrations of contaminants. Our study shows that metabarcoding is a promising ecological approach for rapid, large scale assessment of contaminated and potentially impacted sites.

Oil degradation and variation of microbial communities in contaminated soils induced by different bacterivorous nematodes species

Oil pollution poses a great threat to environments and makes the remediation of oil-contaminated soils an urgent task. Microorganisms are the main biological factor for oil removal in the environment but microbial remediation is greatly affected by environmental factors. For our research, we inoculated three species of bacterivorous nematodes into oil-contaminated soil to explore how bacterivorous nematodes affect soil microbial activities and community structure in contaminated soil, as well as how efficiently different nematodes remove oil pollution from the soil. Six treatments were set in this experiment: sterilized oil-contaminated soil (SOC); nematode-free soil (S); oil-contaminated soil (OC); oil-contaminated soil + Caenorhabditis elegans (OCN1); oil-contaminated soil + Cephalobus persegnis (OCN2); oil-contaminated soil + Rhabditis marina (OCN3) for a 168-day incubation experiment. After the experiment was done, the oil contents in SOC, OC, OCN1, OCN2, and OCN3 were reduced by 6.5%, 32.3%, 38.2%, 42.8%, and 40.2%, respectively, compared with the beginning of the experiment. The amount of phospholipid fatty acids (PLFAs) of Gram-negative bacteria in OC, OCN1, OCN2, and OCN3 was increased by 50.9%, 43.4%, 37.7%, and 47.9%, respectively, compared with that of S. During the 168-day incubation period, the maximum growth of the number of nematodes in OCN1, OCN2, and OCN3 compared with the initial number of the nematodes were 2.25-, 1.52-, and 1.65-fold, respectively. The amount of oil residue in the contaminated soil negatively correlated with the populations of nematodes, total microorganisms, Gram-negative bacteria, actinomycetes, and eukaryotes. Thus, oil pollution increased the number of Gram-negative bacteria, decreased the ratio of Gram-positive bacteria/Gram-negative bacteria and Fungi/Bacteria significantly, and altered the community structure of soil microorganisms. Each species of bacterivorous nematodes has got its unique effect on the microbial activity and community structure in oil contaminated soils, but those tested can promote oil degradation and thus improve the environment of oil contaminated soils.

Use of universal primers for the 18S ribosomal RNA gene and whole soil DNAs to reveal the taxonomic structures of soil nematodes by high-throughput amplicon sequencing

Nematodes are abundant metazoans that play crucial roles in nutrient recycle in the pedosphere. Although high-throughput amplicon sequencing is a powerful tool for the taxonomic profiling of soil nematodes, polymerase chain reaction (PCR) primers for amplification of the 18S ribosomal RNA (SSU) gene and preparation of template DNAs have not been sufficiently evaluated. We investigated nematode community structure in copse soil using four nematode-specific (regions 1–4) and two universal (regions U1 and U2) primer sets for the SSU gene regions with two DNAs prepared from copse-derived mixed nematodes and whole soil. The major nematode-derived sequence variants (SVs) identified in each region was detected in both template DNAs. Order level taxonomy and feeding type of identified nematode-derived SVs were distantly related between the two DNA preparations, and the region U2 was closely related to region 4 in the non-metric multidimensional scaling (NMDS) based on Bray-Curtis dissimilarity. Thus, the universal primers for region U2 could be used to analyze soil nematode communities. We further applied this method to analyze the nematodes living in two sampling sites of a sweet potato-cultivated field, where the plants were differently growing. The structure of nematode-derived SVs from the two sites was distantly related in the principal coordinate analysis (PCoA) with weighted unifrac distances, suggesting their distinct soil environments. The resultant ecophysiological status of the nematode communities in the copse and field on the basis of feeding behavior and maturity indices was fairly consistent with those of the copse- and the cultivated house garden-derived nematodes in prior studies. These findings will be useful for the DNA metabarcoding of soil eukaryotes, including nematodes, using soil DNAs.

Techniques for the detection and quantification of emerging contaminants

In recent years, the diverse industrial practices and human inputs widely disseminated emerging contaminants (ECs) throughout environmental matrices, which is of great concern. Even at low concentrations, ECs pose major ecological problems and threaten human health and the environment’s biota. Consequently, people’s interest and concerns on the widespread dissemination of environmentally connected ECs of great concern as developed due to their scientific understanding, technical innovation, and socioeconomic awareness. Increased detection of contaminants may occur from climatic, socioeconomic, and demographic changes and the growing sensitivity of analytical techniques. Hence, this article reviews the determination of ECs in ecological specimens, from aquatic setup (river water, marine water, and wastewater), sludge, soil, sediment, and air. Sample collection and the quality measures are summarized. The preparation of samples, including extraction and cleanup and the subsequent instrumental analysis of ECs, are all covered. Traditional and recent extraction and cleanup applications to analyze ECs in samples are reviewed here in this paper. The detection and quantification of ECs using gas chromatography (GC) and liquid chromatography (LC) linked with various detectors, particularly mass spectrometry (MS), is also summarized and explored, as are other possible techniques. This study aims to give readers a more excellent knowledge of how new and improved approaches are being developed and serve as a resource for researchers looking for the best method for detecting ECs in their studies.

The environmental impacts of heavy metals in soil, certain plants and wastewater near industrial area of Brahmanbaria, Bangladesh

At various locations around the world, environments are now becoming greatly polluted by heavy metals, while damage is being done to soil and aquatic life with serious implications for humanity as well. Once heavy metals enter the ecosystem, they persist for a long time, and they are very difficult to eliminate. Discharging of industrial wastes enriched with heavy metals substantially pollutes the soil, water, and air. This study investigated the levels of heavy metals around the industrial area of Brahmanbaria, which is located in Chittagong Division, Bangladesh. Samples of soil, wastewater, vegetable, and grass were collected from the industrial area. The heavy metals were quantified using atomic absorption spectroscopy. The heavy metals found in soil were chromium (Cr) 8.2-18.8, lead (Pb) 3.5-18.3, copper (Cu) 4.6-10.8, zinc (Zn) 48.5-273.4, nickel (Ni) 10.06-26.9, and cadmium (Cd) 0.2 mg/kg, respectively. The metal contents in the wastewater were Cr 0.03-0.5, Pb 0.01-0.05, Cu 0.01-0.02, Zn 0.6-11.2, Ni 0.03-0.14, and Cd 0.003 mg/L, respectively. The metal contents in vegetable and grass were Cr 81.5-247.8, Pb 10.3-34.1, Cu 5.5-6.3, Zn 419.8-435.3, and Ni 8.7-15.5 mg/kg, respectively. The amount of metal in the soil, wastewater, and vegetables and grass followed the sequences: Zn > Cr > Ni > Pb > Cu > Cd, Zn > Cr > Ni > Pb > Cu > Cd, and Zn > Cr > Pb > Ni > Cu, respectively. Compared to the WHO guidelines, the soil in the study area was not polluted with Pb, Cu, and Cd but was moderately polluted with Cr, Zn, and Ni. Continual accumulation of metals in the soil, vegetables and grass could pose a serious risk to the environment as well as many life forms.

Trends in soil mercury stock associated with pollution sources on a Mediterranean island (Majorca, Spain)

Hg is a global concern given its adverse effects on human health, food security and the environment, and it requiring actions to identify major local Hg sources and to evaluate pollution. Our study provides the first assessment of Hg stock trends on the entire Majorca surface, identifying major Hg sources by studying the spatiotemporal soil Hg variation at two successive times (2006 and 2016-17). The Hg soil concentration ranged from 14 to 258 μg kg^-1 (mean 52 μg kg^-1). Higher concentrations (over 100 μg kg^-1) were found in two areas: (i) close to the Alcudia coal-fired power plant; (ii) in the city of La Palma. During the 11-year, the total Hg stock in Majorcan soil increased from 432.96 tons to 493.18 tones (14% increase). Based on a block kriging analysis, soil Hg enrichment due to power plant emissions was clearly detectable on a local scale (i.e. a shorter distance than 18 km from the power plant). Nonetheless, a significant island-wide Hg increase due to diffuse pollution was reported. This result could be extrapolated to other popular tourist destinations in the Mediterranean islands where tourism has increased in recent decades In short, more than 60 tons of Hg have accumulated on Majorca island in 11 years.

Distinct community structures of soil nematodes from three ecologically different sites revealed by high-throughput amplicon sequencing of four 18S ribosomal RNA gene regions

Quantitative taxonomic compositions of nematode communities help to assess soil environments due to their rich abundance and various feeding habitats. DNA metabarcoding by the 18S ribosomal RNA gene (SSU) regions were preferentially used for analyses of soil nematode communities, but the optimal regions for high-throughput amplicon sequencing have not previously been well investigated. In this work, we performed Illumina-based amplicon sequencing of four SSU regions (regions 1–4) to identify suitable regions for nematode metabarcoding using the taxonomic structures of nematodes from uncultivated field, copse, and cultivated house garden soils. The fewest nematode-derived sequence variants (SVs) were detected in region 3, and the total nematode-derived SVs were comparable in regions 1 and 4. The relative abundances of reads in regions 1 and 4 were consistent in both orders and feeding groups with prior studies, thus suggesting that region 4 is a suitable target for the DNA barcoding of nematode communities. Distinct community structures of nematodes were detected in the taxon, feeding habitat, and life-history strategy of each sample; i.e., Dorylamida- and Rhabditida-derived plant feeders were most abundant in the copse soil, Rhabditida-derived bacteria feeders in the house garden soil, and Mononchida- and Dorylamida-derived omnivores and predators and Rhabditida-derived bacteria feeders in the field soil. Additionally, low- and high-colonizer–persister (cp) groups of nematodes dominated in the house garden and copse soils, respectively, whereas both groups were found in the field soil, suggesting bacteria-rich garden soil, undisturbed and plant-rich copse soil, and a transient status of nematode communities in the field soil. These results were also supported by the maturity indices of the three sampling sites. Finally, the influence of the primer tail sequences was demonstrated to be insignificant on amplification. These findings will be useful for DNA metabarcoding of soil nematode communities by amplicon sequencing.

Spatial methods to analyze the relationship between Spanish soil properties and cadmium content

In this study, concentrations of cadmium using 3778 samples encompassing the total size of Spain (about 505 km²) were investgated. Two novel spatial methods namely Moran eigenvector spatially varying coefficient (MESVC) and spatially filtered unconditional quantile regression (SF-UQR) were employed with the aim of avoiding the problem of local collinearity which is prevalent in regression models. Additionally, the spatially varying coefficients methods were applied to assess the influence of soil properties together with soil texture on the spatial variations of cadmium. It was indicated that the overall level of cadmium is low compared to the concentrations found around the world. In particular, the values of Cd varied between 0.01 and 2.00 mgkg^-1, with the median of 0.23 mgkg^-1. The residual standard error and adjusted R² produced by MESVC were 0.16 and 0.69, respectively which are better than 0.21 and 0.39 yielded by the SF-UQR model. Both of these models outperformed compared to the geographically weighted regression (GWR) and the performance of MESVC was also better than the traditional method of kriging. For instance, in terms of willmott index (d) and root mean squared relative error (RMSRE), the MESVC had superior performance with values equal to 0.612 and 0.275 compared to 0.399 and 0.379 obtained for the ordinary kriging. The MESVC and GWR demonstrated that CaCO₃, sand, silt and clay had a negligible influence on spatial variations of cadmium whereas, EC had the largest contribution followed by SOM and pH.

Contrasting impacts of mobilisation and immobilisation amendments on soil health and heavy metal transfer to food chain

Heavy metal mobilisation or immobilisation have been widely applied in situ for soil remediation. However, the consequences of the mobilisation or immobilisation amendments on soil health and heavy metal transfer are rarely compared. In this study, four mobilisation additives (EDTA, humic acid, oxalic acid and citric acid) and four immobilisation additives (calcium silicate, lime, biochar and pig manure) were applied in soils contaminated with Cd, Zn, and Pb to investigate their effects on soil microbial and nematode communities, chemical speciation of metals in Amaranthus tricolour L., and metal food chain transfer in soil-plant-insect system. We found that mobilisation amendments inhibited plant growth and EDTA reduced microbial biomass indicated by phospholipid fatty acids. In contrast, immobilisation amendments promoted plant growth. However, abundances of microbe and nematode were reduced by calcium silicate and lime, while they were substantially increased by biochar and pig manure. We also realised that the immobilisation amendments shifted the water-soluble and pectate-/protein-associated fractions to phosphate-/oxalate-associated fractions of metals in plant leaves, enhanced detoxification ability of Prodenia litura larvae, and reduced metal transfer along food chain. However, opposite changes were observed in mobilisation treatments. According to redundancy analysis, we found that the addition of biochar or pig manure improved soil health and function by reducing metal availability and increasing soil available N and P concentrations. Our results indicate that organic immobilisation amendments most effectively improve soil health and reduce metal transfer, and should be recommended for remediation of heavy metal-contaminated soils.

Trifolium repens L. regulated phytoremediation of heavy metal contaminated soil by promoting soil enzyme activities and beneficial rhizosphere associated microorganisms

Rhizosphere soil physiochemical properties, enzyme activities and rhizosphere associated microbial communities are of the central importance for modulating phytoremediation in heavy metal contaminated soil. In this study, the rhizosphere micro-ecological characteristics of phytoremediation in seven groups of contaminated soil with different heavy metal species and concentrations were examined. The results showed that heavy metal-enrichment inhibited plant growth, but enhanced both anions (Cr₂O₇^2-) and cations (Cd²⁺ and Pb²⁺) uptake with corresponding mean values ranging from 19.37 to 168.74 mg/kg in roots and 10.89-86.53 mg/kg in shoots. Trifolium repens L. planting was able to compensate the lost caused by the heavy metal on the soil organic matter, available N, available P, available K and enzyme activities as well. According to the cluster, some species like Lysobacter, Kaistobacter and Pontibacter, was significantly related to heavy metal accumulation while others such as Flavisolibacter, Adhaeribacter and Bacillus promoted plant growth. The importance of root-associated microbial community could relatively regulate plant growth and heavy metal uptake. Our study not only illustrated the correlation among rhizosphere micro-ecological parameters, and the possible mechanisms of phytoremediation regulation, but also provide clear strategy for improving the phytoremediation efficiency.

Taxonomic profiling of individual nematodes isolated from copse soils using deep amplicon sequencing of four distinct regions of the 18S ribosomal RNA gene

Nematodes are representative soil metazoans with diverged species that play crucial roles in nutrient recycling in the pedosphere. Qualitative and quantitative information on nematode communities is useful for assessing soil quality, and DNA barcode-mediated taxonomic analysis is a powerful tool to investigate taxonomic compositions and changes in nematode communities. Here, we investigated four regions (regions 1-4) of the 18S small subunit ribosomal RNA (SSU) gene as PCR targets of deep amplicon sequencing for the taxonomic profiling of individual soil nematodes. We determined the sequence variants (SVs) of 4 SSU regions for 96 nematodes (total 384 amplicons) isolated from copse soils and assigned their taxonomy using the QIIME2 software with dada2 or deblur algorithm and the SILVA database. Dada2 detected approximately 2-fold more nematode-derived SVs than deblur, and a larger number of SVs were obtained in regions 1 and 4 than those in other regions. These results and sufficient reference sequence coverage in region 4 indicated that DNA barcoding using a primer set for region 4 followed by dada2-based analysis would be most suitable for soil nematode taxonomic analysis. Eighteen SSU-derived operational taxonomic units (rOTUs) were obtained from 68 isolates, and their orders were determined based on the phylogenetic trees built by four regional sequences of rOTUs and 116 nematode reference species as well as the BLASTN search. The majority of the isolates were derived from three major orders Dorylaimida (6 rOTUs, 51.5% in 68 isolates), Rhabditida (4 rOTUs, 29.4%), and Triplonchida (7 rOTUs, 17.6%). The predicted feeding types of the isolates were fungivores (38.2% in total nematodes), plant feeders (32.4%), and 14.7% for both bacterivores and omnivores/predators. Additionally, we attempted to improve the branch structure of phylogenetic trees by using long nucleotide sequences artificially prepared by connecting regional sequences, but the effect was limited.

Spatial distribution and assessment of the human health risks of heavy metals in a retired petrochemical industrial area, south China

Petrochemical industries are widely distributed in China. As a negative consequence, heavy metals in petrochemical area can result in soil contamination. However, the relevant research of heavy metals contamination in petrochemical area was few. In this study, a total of 103 topsoil samples (<20 cm) and 25 profile soil samples were collected and examined in a retired petrochemical industrial area, South China. The results showed the mean contents of Hg, Cd, As, Pb, Ni and Cu were 0.18, 0.69, 16.22, 47.24, 31.62 and 93.06 mg kg^-1, respectively. The spatial distribution of six metals in topsoil was largely attributed to the industrial activities during the petroleum refining and transshipment process. Ni was the main pollutant in the petroleum refining process. While, the contamination of other metals mainly were caused by the leakage of the oil during transshipment. The migration of six metals to subsoil layers was also observable. In accordance, Hg, Cd, As, Pb, Cu, and Ni dropped by 95.02, 71.91, 89.45, 90.88, 99.22, and 65.07%, respectively, compared to their contents in topsoil. The contamination of the heavy metals was mainly caused during the process of petroleum refining and transshipment. The distribution of heavy metals in the factory was mainly affected by the industrial activities or the lateral infiltration of Lianhuashan River. Soil ingestion was the primary pathway for children and adults exposure to heavy metals. The total non-cancer human health risk induced by heavy metals was within the limit of USEPA (10^-6 a^-1). While the cancer risks alone induced by As through soil ingestion to children was 1.14 × 10^-6 a^-1, which exceeded the limit of USEPA. This study indicated that not only petroleum hydrocarbon but also heavy metals can cause soil contamination in a retired petrochemical industrial area, which provides a novel cognition. Altogether, measures should be taken in practice to substantially improve the soil quality in petrochemical industrial area.

Indicators for assessment of soil quality: a mini-review

Soil quality is the competence of soil to perform necessary functions that are able to maintain animal and plant productivity of the soil. Soil consists of various physical, chemical, and biological parameters, and all these parameters are involved in the critical functioning of soil. There is a need for continuous assessment of soil quality as soil is a complex and dynamic constituent of Earth's biosphere that is continuously changing by natural and anthropogenic disturbances. Any perturbations in the soil cause disturbances in the physical (soil texture, bulk density, etc.), chemical (pH, salinity, organic carbon, etc.), and biological (microbes and enzymes) parameters. These physical, chemical, and biological parameters can serve as indicators for soil quality assessment. However, soil quality assessment cannot be possible by evaluating only one parameter out of physical, chemical, or biological. So, there is an emergent need to establish a minimum dataset (MDS) which shall include physical, chemical, and biological parameters to assess the quality of the given soil. This review attempts to describe various physical, chemical, and biological parameters, combinations of which can be used in the establishment of MDS.

Ecological drivers of methanotrophic communities in paddy soils around mercury mining areas

Methanotrophs play a crucial role in mitigating methane (CH₄) emission by oxidizing produced CH₄ in paddy soils; however, ecological drivers of methanotrophic community in the soils around heavy metal contaminated areas remain unclear. In this study, we evaluated the effects of heavy metal pollution and soil properties on the abundance, diversity and composition of methanotrophic community in paddy soils from two typical mercury (Hg) mining regions in southwest China. The results of random forest and structure equation models suggest that both heavy metal content and soil nutrients greatly influenced the attributes of methanotrophic community. In general, the abundance and diversity of methanotrophs were negatively related to soil Hg content, but showed positive correlation with soil organic carbon content. However, the other metals (cadmium (Cd), nickel (Ni), lead (Pb), arsenic (As), zinc (Zn)) had inconsistent associations with the microbial indexes of methanotrophic community in the soil. Elevated levels of heavy metal and nutrients in the soils shifted the community composition of methanotrophs. For example, Pb, As and Zn contents had negative associations with the relative abundance of Methylocaldum. In addition, changes in the relative abundance of ecological clusters within the co-occurrence network of methanotrophs were related to metal contents and soil properties. Together, our findings provide novel insights into understanding ecological drivers of methanotrophic community in paddy soils around Hg mining regions, with important implications for mitigating CH₄ emissions in terrestrial ecosystems.

From Laboratory Tests to the Ecoremedial System: The Importance of Microorganisms in the Recovery of PPCPs-Disturbed Ecosystems

The presence of a wide variety of emerging pollutants in natural water resources is an important global water quality challenge. Pharmaceuticals and personal care products (PPCPs) are known as emerging contaminants, widely used by modern society. This objective ensures availability and sustainable management of water and sanitation for all, according to the 2030 Agenda. Wastewater treatment plants (WWTP) do not always mitigate the presence of these emerging contaminants in effluents discharged into the environment, although the removal efficiency of WWTP varies based on the techniques used. This main subject is framed within a broader environmental paradigm, such as the transition to a circular economy. The research and innovation within the WWTP will play a key role in improving the water resource management and its surrounding industrial and natural ecosystems. Even though bioremediation is a green technology, its integration into the bio-economy strategy, which improves the quality of the environment, is surprisingly rare if we compare to other corrective techniques (physical and chemical). This work carries out a bibliographic review, since the beginning of the 21st century, on the biological remediation of some PPCPs, focusing on organisms (or their by-products) used at the scale of laboratory or scale-up. PPCPs have been selected on the basics of their occurrence in water resources. The data reveal that, despite the advantages that are associated with bioremediation, it is not the first option in the case of the recovery of systems contaminated with PPCPs. The results also show that fungi and bacteria are the most frequently studied microorganisms, with the latter being more easily implanted in complex biotechnological systems (78% of bacterial manuscripts vs. 40% fungi). A total of 52 works has been published while using microalgae and only in 7% of them, these organisms were used on a large scale. Special emphasis is made on the advantages that are provided by biotechnological systems in series, as well as on the need for eco-toxicological control that is associated with any process of recovery of contaminated systems.

The response of soil nematode Caenorhabditis elegans on the sewage sludge-derived micropollutants

Sewage sludge application to soil is of great interest, due to required organic matter and the wide spectra of nutrients it provides. However, the presence of unpredictable content of emerging contaminants may turn this valuable raw material into a hazardous substance. In this study, three selected sewage sludges derived micropollutants from different origins; that is, one each under persistent organic pollutants (POPs), pharmaceuticals and personal care products (PPCPs) were considered. The effect of each micropollutant on the feeding activity of free-living soil nematode Caenorhabditis elegans was analysed. The analysis was performed in model soil solution using a larval feeding inhibition assay. The results showed no significant effects from selected POP-2,2',4,4',5-pentabromodiphenyl either and pharmaceutical-chlortetracycline on the feeding activity of tested nematodes. On the contrary, feeding activity was inhibited by PPCP-galaxolide (HHCB) with an effective concentration of 12.2 ± 2.2 mg.l-1. The calculated risk quotient for galaxolide (RQ = 0.14) demonstrated a medium ecological risk to the nematodes. Based on our findings, concentrations of micropollutants in sewage sludge treated soil pose negligible risk to feeding activity of soil nematode. However, the potential impact of musk compounds on free-living soil biota requires detailed evaluation in further research.

Aquatic geochemistry status in the south, central, and highland regions of Vietnam

Aquatic geochemical distribution in the Central, Highland, and Southern regions of Vietnam, including: Da Nang city (Hoa Khanh Industrial Park, Aquaculture Industrial Zone Tho Quang, Do Toa River Deposit Area), Da Lat city (Prenn Pass), Dong Nai province (Suoi Ram hamlet, Cam My district, Long Giao) was investigated by using 2D electrical resistivity tomography (ERT) combined with geochemical analysis. In this research, the correlation between tectonic formation, geochemical composition, and groundwater distribution was assessed between regions. Geochemistry of the Holocene aquifer (from 10 to 30 m underground) was studied considering major ions and trace elements measured in wet and dry seasons. The results of chemometric evaluation show that groundwater in Central Vietnam, Da Nang in particular, has a higher frequency of environmental toxin distribution than in Da Lat and Dong Nai. Groundwater in Da Lat with the advantage of high distribution of K, Ca, Mg, Fe, and Zn. The micro and macro elements such as Co, Mo, Na have high distribution in groundwater in Dong Nai. Meanwhile, groundwater at the study sites in Da Nang showed high concentrations of heavy metals with high toxicity such as, Al, Pb, and Ni. In Da Nang city, the concentration of Pb in groundwater samples from Holocene aquifer ranges between 74 in dry season and 214 ppb in wet season, exceeding the WHO guideline of 21 ppb. There is an increase of mean temperature of groundwater from Holocene aquifer of studied areas, from 17 in wet season to 26.2 °C in dry season. It shows that the ambient temperature effects on the groundwater reflects the relatively surficial character of Holocene aquifer. At the same time, the impact factors, including natural conditions, production methods, customs, and habits were analyzed to formulate the risks and potential risks of geohazards in mechanical construction, infrastructure, civil works, and underground works affecting the social security in the research areas. Through the convection and transfer processes, the electrolyte pollutants such as NaCl, KCl, and acetic acid (the resistivity is about 5.38 Ω m) have been accumulated in groundwater of Da Nang - a developing city with industrial clusters. This problem is similar to Suoi Ram hamlet, where groundwater is also showing signs of pollution due to the use of chemicals in cultivation (mainly cashew nut growth). In terms of density and flow of underground water, according to the results of the electrical images, generally in Suoi Ram Hamlet pollution is much larger than the Hoa Khanh industrial park (Da Nang), which is also quite reasonable because the southern area is lower than the Central and Highland regions. Research contributed importantly in finding the rules of geological distribution, groundwater at elevation topography, of great significance in the earth and environmental science.

Potentially toxic elements in commonly consumed fish species from the western Mediterranean Sea (Almería Bay): Bioaccumulation in liver and muscle tissues in relation to biometric parameters

Marine pollution is one of today's most relevant problems. Public awareness has been raised about the harmful potential of heavy metals (HMs) accumulating in edible fish and possibly ending up in human diet through the food chain. This study aimed to characterize and evaluate As, Cd, Cr, Cu, Ni and Pb contents in four edible fish species from the western Mediterranean Sea. Liver and muscle toxic elements were determined by GF-AAS in Mullus surmuletus, Merluccius merluccius, Auxis rochei and Scomber japonicus from Almería Bay (Spain). Muscular composition, biometrics and trophic levels were also determined. The mean PTE concentration levels (mg kg^-1, DW) in fish muscle tissue were: As (2.90-53.74), Cd (0.01-0.18), Cr (0.53-2.01), Cu (0.78-6.93), Ni (0.06-0.24), Pb (0.0-0.32). These concentrations did not exceed the maximum limits set by European legislation (Commission Regulation (EC) No. 1881/2006) for the intake of these marine species. Accumulation of toxic elements tends to be seen in the liver (As (7.31-26.77), Cd (0.11-8.59), Cr (0.21-2.94), Cu (2.64-16.90), Ni (0.16-1.03), Pb (0.0-0.99)). As was the element at highest risk in this Mediterranean region, especially due to red mullet values in muscle. The high As contents with living habits as benthic species that feed near the coast. HMs, especially muscle Cd contents, were associated with higher contents of lipids and organic matter, and bigger specimen size (length and weight), while As was linked to higher fish protein content. However, these relationships between potentially toxic elements (PTE) and biometric indices and body composition parameters depend on species. Finally, the THQ indices indicated that eating fish from Almería Bay poses no human health risk despite pollution from the Almería coastline.

Assessment of the human health risks of heavy metals in nine typical areas

Human health risks of five different heavy metals were assessed in nine typical areas in Asia, Europe, and Africa. The geoaccumulation index (I_geo) of arsenic (As) in Hyderabad (HB), cadmium (Cd) in Veles (VL), and lead (Pb) in Murcia (MC) were found to be 5, indicating extreme contamination. This is related to their high concentrations in soil. The concentration of As in wheat in Niger Delta (ND) and European Union (EU) areas were 3.3 and 2.55 mg/kg, which were 22 and 17 times respectively of the World Health Organization (WHO)/Food and Agriculture Organization (FAO) criteria. In general, the concentrations of heavy metals in wheats were higher than those in corns, indicating that heavy metals were easier to accumulate in wheats than in corns. The human risks induced by the carcinogenic metals As and Cd were much higher than those induced by noncarcinogenic metals in different exposure ways. The human health risks of heavy metals in different exposure ways were R_w-ing > R_c-ing > R_s-ing > R_s-der > R_s-inh. The human health risks induced by wheat ingestion for adults and children accounted for 67.75-97.52% and 69.52-98.04%, respectively, of the total human health risks. The total human health risks in the VL and MC areas were 1.58 × 10^-4 a^-1 and 1.3 × 10^-4 a^-1 for adults and 1.14 × 10^-4 a^-1 and 9.47 × 10^-5 a^-1 for children, respectively, which were significantly high according to the Environmental Protection Agency and International Commission on Radiological Protection. The ranking of the total human health risks in different areas were R_VL > R_MC > R_ND > R_EU > R_HB > R_KY > R_TB > R_MLV > R_NHM. The total human health risks of adults were higher than those of children.

Effects of bacterial-feeding nematodes on soil microbial activity and the microbial community in oil-contaminated soil

Rapid economic development has caused an increase in serious pollution problems due to the ever-increasing use of oil and its products, thus making oil pollution control an urgent task. Studies have shown that large amounts of bacterial-feeding nematodes are present in oil-contaminated soil; their function is as yet unclear. In this experiment, different densities of Caenorhabditis elegans (C. elegans) were inoculated into artificially simulated oil-contaminated soil to examine their effects on microbial activity and the microbial community in oil-contaminated soil. Six treatments were investigated: sterilized oil-contaminated soil as control 1 (FSP), nematode-free soil as control 2 (S), oil-contaminated soil (SP), oil-contaminated soil + 5, 10 or 20 individual C. elegans per gram of dry soil (i.e., SPN5, SPN10, SPN20). Results showed that oil pollution significantly increased the soil basal respiration. However, C. elegans weakened the soil basal respiration to different degrees and soil microbial respiration entropy essentially changed in line with the soil basal respiration. Oil pollution and C. elegans boosted catalase activity in contaminated soil by approximately 64.2-145.1%. Soil urease activity of SPN5, SPN10 and SPN20 was 88.5%, 126.7% and 109.0% stronger, respectively, than that of SP. The inoculation of C. elegans changed the microbial phospholipid fatty acid content in the oil-contaminated soil, including soil bacteria, fungi, actinomycetes, Gram-positive bacteria (G⁺) and Gram-negative bacteria (G^-). Therefore, this research demonstrates that C. elegans can stimulate microbial reproduction in oil-contaminated soil, enhance related soil enzyme activities and regulate soil microbial community structure and diversity, thereby improving the contaminated soil environment and promoting oil degradation.

Pollution indices as useful tools for the comprehensive evaluation of the degree of soil contamination-A review

The paper provides a complex, critical assessment of heavy metal soil pollution using different indices. Pollution indices are widely considered a useful tool for the comprehensive evaluation of the degree of contamination. Moreover, they can have a great importance in the assessment of soil quality and the prediction of future ecosystem sustainability, especially in the case of farmlands. Eighteen indices previously described by several authors (I_geo, PI, EF, C_f, PI_sum, PI_Nemerow, PLI, PI_ave, PI_Vector, PIN, MEC, CSI, MERMQ, C_deg, RI, mCd and ExF) as well as the newly published Biogeochemical Index (BGI) were compared. The content, as determined by other authors, of the most widely investigated heavy metals (Cd, Pb and Zn) in farmland, forest and urban soils was used as a database for the calculation of all of the presented indices, and this shows, based on statistical methods, the similarities and differences between them. The indices were initially divided into two groups: individual and complex. In order to achieve a more precise classification, our study attempted to further split indices based on their purpose and method of calculation. The strengths and weaknesses of each index were assessed; in addition, a comprehensive method for pollution index choice is presented, in order to best interpret pollution in different soils (farmland, forest and urban). This critical review also contains an evaluation of various geochemical backgrounds (GBs) used in heavy metal soil pollution assessments. The authors propose a comprehensive method in order to assess soil quality, based on the application of local and reference GB.

Trace elements concentrations in soil, desert-adapted and non-desert plants in central Iran: Spatial patterns and uncertainty analysis

The concentrations of Cd, Cr and Pb in soil samples and As, Cd, Cr and Pb in plant specimens were analyzed in an arid area in central Iran. Plants were categorized into desert-adapted (Haloxylon ammodendron, Atraphaxis spinosa and Artemisia persica) and non-desert species. It was found that the trace element (TE) accumulating potential of the desert species (Haloxylon ammodendron and Artemisia persica) with a mean value of 0.1 mg kg^-1 for Cd was significantly higher than that of the majority of the non-desert species with an average of 0.05 mg kg^-1. Artemisia also had a high As accumulating capability with a mean level of 0.8 mg kg^-1 in comparison with an average of 0.2 mg kg^-1 for most of the other plant species. The mean values of Cr and Pb in Haloxylon ammodendron and Artemisia persica were 5 and 3 mg kg^-1, respectively. Among the desert-adapted plants, Atraphaxis proved to be a species with high Cr and Pb accumulating potential, as well. The geoaccumulation index and the overall pollution scores indicated that the highest environmental risk was related to Cd. Different statistical analyses were used to study the spatial patterns of soil Cd and their connections with pollution sources. The variogram was estimated using a classical approach (weighted least squares) and was compared with that of the posterior summaries that resulted from the Bayesian technique, which lay within the 95% Bayesian credible quantile intervals (BIC) of posterior parameter distributions. The prediction of cadmium values at un-sampled locations was implemented by multi-Gaussian kriging and sequential Gaussian simulation methods. The prediction maps showed that the region most contaminated by Cd was the north-eastern part of the study area, which was linked to mining activities, while agricultural influence contributed less in this respect.

Sublethal and chronic effects of reclaimed water on aquatic organisms. Looking for relationships between physico-chemical characterisation and toxic effects

The use of reclaimed water for irrigation and aquaculture purposes is generally considered a reliable alternative for sustainable water management in regions with water scarcity. Many organic compounds, generally called compounds of emerging concern (CECs), have been detected in reclaimed water, which implies continuous exposure for aquatic organisms. To date no quality criteria have been proposed for this group of compounds. This work aims to assess the acute, sublethal and chronic effects of reclaimed water using two representative organisms of the aquatic compartment; the green alga Chlorella vulgaris and the microcrustacean Daphnia magna. The study comprises the 72 h-algal growth inhibition test, the D. magna feeding bioassay and the D. magna reproduction test. The results highlighted, for the selected characterised compounds, no differences in the concentrations between the different tertiary WWTP treatments, except for the particular case of carbamazepine. Considering seasonality, no differences were observed between the two different sample collection campaigns. The sublethal and chronic effects observed for these samples could not be explained by the lower concentrations found in the chemical characterisation. However, in the majority of cases, dilution of raw reclaimed water reduced the toxic effects of these samples. Several interactions among compounds can affect the mixture's toxicity. Canonical correlation analyses (CCA) were included to explore the potential relationships between the physico-chemical characterisation of reclaimed water and effects on aquatic organisms. The results corroborated the toxic effect of some pharmaceuticals, in particular beta-blockers and antibiotics, on the growth and yield of green algae, as well as inhibition of daphnia reproduction. Thus the CCA methods could help to elucidate the potential relationships between the physico-chemical characterisation and toxic effects by considering all the potential interactions.

Soil Nematode Abundances were Increased by an Incremental Nutrient Input in a Paddy-upland Rotation System

To study the effect of fertilization on soil nematode communities in a paddy-upland rotation system, an ongoing thirty-three years long-term fertilizer experiment is conducted which includes seven treatments; an unfertilized treatment (control), nitrogen (N), phosphorus (P), potassium (K) fertilizer treatments (N, NP, NPK) and organic manure (M) combined with chemical fertilizer treatments (MN, MNP, and MNPK). The soil nematode community structure and crop yields were determined in 2012 and 2013. Overall total nematode abundance was increased by an incremental nutrient input both in the rice and wheat fields. Total number of nematode was 1.25 – 2.37 times greater in the rice field and was 1.08 – 2.97 times greater in wheat field in the fertilization treatments than in the unfertilized treatment. Soil free-living nematode abundances was significantly (P < 0.001) increased in organic manure combined with chemical fertilizer treatments in rice field. Fungi-feeders and plant-feeding nematodes abundances were not significantly different among treatments in rice and wheat fields. Omnivorous and predatory nematodes were the most dominant groups in the present study. Omnivores, predators and Prodorylaimus abundances were significantly (P < 0.05) higher in organic manure combined with NPK fertilizer treatments than in chemical fertilizer alone and unfertilized treatments both in rice and wheat fields. Stepwise regressions revealed that soil free-living nematodes were significant predictors of rice grain yields (R² = 0.56, P < 0.001) and omnivorous and predatory nematodes were significant predictors of the wheat grain yield (R² = 0.89, P < 0.001). Therefore, long-term application of organic manure combined with chemical fertilizer could increase nematode abundances and crop yields. Organic manure combined with chemical fertilizer application was recommended in agricultural ecosystem.

Mercury contents in relation to biometrics and proximal composition and nutritional levels of fish eaten from the Western Mediterranean Sea (Almería bay)

Total liver and muscle mercury, and muscular composition, biometrics and trophic levels, were determined in four species (Mullus surmuletus, Merluccius merluccius, Auxis rochei and Scomber japonicus) of the Mediterranean Sea (Almería Bay, Spain). Mercury levels did not exceed the maximum residue limit, and M. merluccius obtained the highest level in muscle. Considerable variations in Hg content among individuals were observed in non-gregarious species. A positive correlation between Hg and trophic level or length was found in muscle, but not in liver. Organs (liver or muscle) with major Hg accumulation depend on species; muscle in M. merluccius and liver in S. japonicus. The results indicate that Hg levels in fish depend on intra- and interspecies factors that should be taken into account in systems to monitor Hg levels.

Wood and bark of Pinus halepensis as archives of heavy metal pollution in the Mediterranean Region

Natural levels of heavy metals (HM) have increased during the industrial era to the point of posing a serious threat to the environment. The use of tree species to record contamination is a well-known practice. The objective of the study was to compare HM levels under different pollution conditions: a) soil pollution due to mining waste; b) atmospheric pollution due to coal-fired power plant emissions. We report significant HM enrichment in Pinus halepensis tissues. Near a burning power plant, Pb content in a tree wood was 2.5-fold higher that in natural areas (no pollution; NP). In mining areas, Cd content was 25-fold higher than NP. The hypothesis that HM contents in tree rings should register pollution is debatable. HM uptake by pines from soil, detoxification mechanisms and resuspended local soil dust is involved in HM contents in wood and bark.

Impact of selected drugs and their binary mixtures on the germination of Sorghum bicolor (sorgo) seeds

The aim of this study was to assess the toxicological potential of binary drug mixtures and individual drugs under different pH conditions with different inorganic ion additions on the germination of Sorghum bicolor (sorgo) seeds. To assess whether the given drug mixtures were more phytotoxic than the individual compounds, concentration addition (CA) and independent action (IA) approaches were applied to estimate the predicted phytotoxicity values, followed by calculations of the MDR (model deviation factor) to determine the deviation from the predicted values. Binary mixtures of chloramphenicol with ketoprofen, diclofenac sodium, and oxytetracycline hydrochloride proved to be synergistic. The pH changes had the largest impact on the phytotoxicity of the diclofenac sodium and ketoprofen solutions, elevating their toxicity toward S. bicolor, and the co-presence of inorganic ions was shown to have an impact on ketoprofen, chloramphenicol, and oxytetracycline hydrochloride. Most of the interactions between sorgo plants and pharmaceuticals with added ions were antagonistic in nature, particularly those calculated using the IA model, with a few cases (one case for ketoprofen and chloramphenicol, two cases for oxytetracycline hydrochloride, and four cases for diclofenac sodium) of overestimation.

The effects of vegetation cover on soil nematode communities in various biotopes disturbed by industrial emissions

Better understanding of interactions among belowground and aboveground components in biotopes may improve our knowledge about soil ecosystem, and is necessary in environment assessment using indigenous soil organisms. In this study, we proposed that in disturbed biotopes, vegetation play important role in the buffering of contamination impact on soil communities and decrease the ecological pressure on soil biota. To assess the effects of these interactions we compared nematode communities, known for their bioindication abilities, from four types of disturbed and undisturbed biotopes (coniferous forest, permanent grassland, agricultural field, clearings), where the main stress agent was represented by long-term acidic industrial emissions containing heavy metals (As, Cd, Cu, and Pb). To understand the ecological interactions taking place in studied biotopes, we studied abiotic factors (soil properties) and biotic factors (vegetation, nematode communities). Except significant increase in metals total and mobile concentrations in disturbed biotopes soil, we found acidification of soil horizon, mainly in the clearings (pH=3.68), due to SO₂ precipitation. These factors has caused in clearings degradation of native phytocoenoses and decrease in decomposition rate characterized by high amount of organic matter (C_ox=4.29%). Nematodes reacts to these conditions by shifts in trophic structure (bacteriovores to fungal feeders), increase in c-p 2 genera (Aphelenchoides, Acrobeloides, and Cephalobus), absence of sensitive groups (c-p 3-5, omnivores, predators), and decrease in ecological indices (SI, MI, MI2-5, H'). Similar contamination was found in forest biotope, but the nematodes composition indicates more suitable conditions; more complex community structure (presence of sensitive trophic and higher c-p groups), higher abundance and indices values, comparable with less stressed field and grassland biotopes. As showed our results, the vegetation undoubtedly plays an important role not only as a resource of services indispensable for the ecosystem, but also as a significant buffer of negative impacts acting within.

Entomopathogenic nematode food webs in an ancient, mining pollution gradient in Spain

Mining activities pollute the environment with by-products that cause unpredictable impacts in surrounding areas. Cartagena-La Unión mine (Southeastern-Spain) was active for >2500years. Despite its closure in 1991, high concentrations of metals and waste residues remain in this area. A previous study using nematodes suggested that high lead content diminished soil biodiversity. However, the effects of mine pollution on specific ecosystem services remain unknown. Entomopathogenic nematodes (EPN) play a major role in the biocontrol of insect pests. Because EPNs are widespread throughout the world, we speculated that EPNs would be present in the mined areas, but at increased incidence with distance from the pollution focus. We predicted that the natural enemies of nematodes would follow a similar spatial pattern. We used qPCR techniques to measure abundance of five EPN species, five nematophagous fungi species, two bacterial ectoparasites of EPNs and one group of free-living nematodes that compete for the insect-cadaver. The study comprised 193 soil samples taken from mining sites, natural areas and agricultural fields. The highest concentrations of iron and zinc were detected in the mined area as was previously described for lead, cadmium and nickel. Molecular tools detected very low numbers of EPNs in samples found to be negative by insect-baiting, demonstrating the importance of the approach. EPNs were detected at low numbers in 13% of the localities, without relationship to heavy-metal concentrations. Only Acrobeloides-group nematodes were inversely related to the pollution gradient. Factors associated with agricultural areas explained 98.35% of the biotic variability, including EPN association with agricultural areas. Our study suggests that EPNs have adapted to polluted habitats that might support arthropod hosts. By contrast, the relationship between abundance of Acrobeloides-group and heavy-metal levels, revealed these taxa as especially well suited bio-indicators of soil mining pollution.