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Liu R, Song F, Sun L, Yan F, Jin Q, Yan F, Xia X, Wang X, Gao Y. Exploring the pathogenic and transmission characteristics of JN.1 in golden hamsters based on different attack methods. Virology 2025; 608:110548. [PMID: 40253975 DOI: 10.1016/j.virol.2025.110548] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2025] [Revised: 03/30/2025] [Accepted: 04/15/2025] [Indexed: 04/22/2025]
Abstract
Since its emergence at the end of 2023, the JN.1 variant of COVID-19 has become the dominant strain globally. Currently, its characteristics in related animal models remain largely unknown. The results indicate that JN.1 can cause weight loss, viral load, viral titer, and histopathological changes in golden hamsters via intranasal and intragastric inoculation methods, with intranasal inoculation leading to faster viral replication. Interestingly, both viral load and viral titer of JN.1 are significantly lower than those of its parental strains BA.2 and XBB EG.5.1. A comparison of hematological data from the two inoculation methods was also consistent with previous findings. This highlights the importance of the infection route in studying the virus's progression and characteristics. In direct transmission studies of JN.1, the minimum time for virus transmission was 24 h, while XBB EG.5.1 could transmit the virus in as little as 6 h. Finally, the in vivo adaptability of JN.1 was investigated, with XBB EG.5.1 showing a more apparent adaptability advantage. Therefore, compared with EG.5.1, the pathogenicity and transmissibility of JN.1 are significantly weakened.
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Affiliation(s)
- Ruixue Liu
- College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, China; Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China
| | - Fang Song
- College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, China; Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China
| | - Li Sun
- College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, China; Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China
| | - Fang Yan
- Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China
| | - Qiushi Jin
- Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China
| | - Fang Yan
- College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, China
| | - Xianzhu Xia
- Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China
| | - Xuefeng Wang
- Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
| | - Yuwei Gao
- College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, China; Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
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Thirugnanasampanthar M, Tian L, Rhem RG, Libera DD, Gomez M, Jackson K, Fox-Robichaud AE, Dolovich MB, Hosseinidoust Z. Unraveling the impact of operational parameters and environmental conditions on the quality of viable bacterial aerosols. PNAS NEXUS 2024; 3:pgae473. [PMID: 39529911 PMCID: PMC11551483 DOI: 10.1093/pnasnexus/pgae473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/19/2024] [Accepted: 09/30/2024] [Indexed: 11/16/2024]
Abstract
Viable pathogen-laden droplets of consistent quality are essential for reliably assessing the protection offered by facemasks against airborne infections. We identified a significant gap in guidance within standardized tests for evaluating the filtration efficiencies of facemask materials using viable bacteria-laden aerosol droplets. An aerosol platform, built according to the American Society for Testing and Materials standard F2101-19, was used to validate and standardize facemask filtration test procedures. We utilized this platform to investigate the impact of varying five operating parameters, namely suspension media composition, relative humidity, pathogen concentration, and atomizer airflow and feed flow rates, on the aerosol quality of viable bacteria-laden aerosols. We achieved consistent generation of 1,700 to 3,000 viable bacteria-laden droplets sized between 2.7 and 3.3 µm under the following optimized test conditions: 1.5% w/v peptone water concentration, ≥80% relative humidity at 24 ± 2 °C, 1 × 105 CFU/mL bacterial concentration, 1.5 L/min atomizer airflow rate, and 170 μL/min feed flow rate. We also explored the consequence of deviating from these optimized test parameters on viable bacteria-laden aerosol quality. These results highlight the importance of controlling these parameters when studying airborne transmission and control.
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Affiliation(s)
| | - Lei Tian
- Department of Chemical Engineering, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L7, Canada
| | - Rod G Rhem
- Affiliate, Research Institute of St Joseph's Hospital and Firestone Institute for Respiratory Health, 50 Charlton Ave East, Hamilton, ON, L8N 4A6, Canada
| | - Danielle D Libera
- Department of Biochemistry and Biomedical Sciences, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4K1, Canada
| | - Mellissa Gomez
- Department of Chemical Engineering, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L7, Canada
| | - Kyle Jackson
- Department of Chemical Engineering, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L7, Canada
- Farncombe Family Digestive Health Research Institute, McMaster University, Hamilton, ON, L8S 4K1, Canada
| | - Alison E Fox-Robichaud
- Department of Medicine, Faculty of Health Sciences, McMaster University, 1200 Main Street West, Hamilton, ON, L8N 3Z5, Canada
- Centre of Excellence in Protective Equipment and Materials, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L7, Canada
| | - Myrna B Dolovich
- Farncombe Family Digestive Health Research Institute, McMaster University, Hamilton, ON, L8S 4K1, Canada
- Department of Medicine, Faculty of Health Sciences, McMaster University, 1200 Main Street West, Hamilton, ON, L8N 3Z5, Canada
- Centre of Excellence in Protective Equipment and Materials, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L7, Canada
| | - Zeinab Hosseinidoust
- Department of Chemical Engineering, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L7, Canada
- Farncombe Family Digestive Health Research Institute, McMaster University, Hamilton, ON, L8S 4K1, Canada
- Centre of Excellence in Protective Equipment and Materials, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L7, Canada
- School of Biomedical Engineering, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L7, Canada
- Michael DeGroote Institute for Infectious Disease Research, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4L8, Canada
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Schwarz K, Struß N, Banari L, Hohlfeld JM. Quantifying Exhaled Particles in Healthy Humans During Various Respiratory Activities Under Realistic Conditions. J Aerosol Med Pulm Drug Deliv 2024; 37:51-63. [PMID: 38285475 DOI: 10.1089/jamp.2022.0076] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2024] Open
Abstract
Background: Quantitatively collecting and characterizing exhaled aerosols is vital for infection risk assessment, but the entire droplet size spectrum has often been neglected. We analyzed particle number and size distribution of healthy participants in various respiratory activities, considering inter-individual variability, and deployed a simplified far-field model to inform on infection risks. Methods: Participants repeated the same respiratory activities on two visits. Particles were collected using an airtight extraction helmet supplied with High Efficiency Particulate Air (HEPA) filtered air. The sampling volume flow was transported to two particle counters covering the small and large particle spectrum. The applied simple mass balance model included respiratory activity, viral load, room size, and air exchange rates. Results: Thirty participants completed the study. The major fraction of the number-based size distribution was <5 μm in all respiratory activities. In contrast, the major fraction of the volume-based size distribution was 2-12 μm in tidal breathing, but >60 μm in all other activities. Aerosol volume flow was lowest in tidal breathing, 10-fold higher in quiet/normal speaking, deep breathing, coughing, and 100-fold higher in loud speaking/singing. Intra-individual reproducibility was high. Between participants, aerosol volume flow varied by two orders of magnitude in droplets <80 μm, and three orders of magnitude in droplets >80 μm. Simple model calculations not accounting for potential particle size-dependent differences in viral load and infection-related differences were used to model airborne pathogen concentrations. Conclusions: Quantitative analysis of exhaled aerosols for the entire droplet size spectrum as well as the variability in aerosol emission between individuals provides information that can support infection research. Clinical Trial Registration number: NCT04771585.
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Affiliation(s)
- Katharina Schwarz
- Fraunhofer Institute for Toxicology and Experimental Medicine, Hannover, Germany
| | - Nadja Struß
- Fraunhofer Institute for Toxicology and Experimental Medicine, Hannover, Germany
| | - Liudmila Banari
- Fraunhofer Institute for Toxicology and Experimental Medicine, Hannover, Germany
| | - Jens M Hohlfeld
- Fraunhofer Institute for Toxicology and Experimental Medicine, Hannover, Germany
- Department of Respiratory Medicine, Hannover Medical School, Hannover, Germany
- German Center for Lung Research (DZL), Biomedical Research in Endstage and Obstructive Lung Disease Hannover BREATH, Hannover, Germany
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Sousan S, Boatman M, Johansen L, Fan M, Roper RL. Comparing and validating air sampling methods for SARS-CoV-2 detection in HVAC ducts of student dorms. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 343:123164. [PMID: 38103710 DOI: 10.1016/j.envpol.2023.123164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 11/27/2023] [Accepted: 12/12/2023] [Indexed: 12/19/2023]
Abstract
The Coronavirus disease 2019 (COVID-19) pandemic demonstrated the threat of airborne pathogenic respiratory viruses such as the airborne Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). The ability to detect circulating viruses in a workplace or dormitory setting allows an early warning system that can alert occupants to implement precautions (e.g. masking) and/or trigger individual testing to allow isolation and quarantine measures to halt contagion. This work extends and validates the first successful detection of SARS-CoV-2 virus in dormitory Heating, Ventilation, and Air Conditioning (HVAC) systems and compares different air sampling methods and media types combined with optimized quantitative Reverse-Transcription PCR (qRT-PCR) analysis. The study was performed in two environments; large dormitories of students who underwent periodic testing for COVID-19 (unknown environment) and the HVAC air from a suite with a student who had tested positive for COVID-19 (known dorm). The air sampling methods were performed using Filter Cassettes, BioSampler, AerosolSense Sampler and Button Sampler (with four media types with different pore sizes of 5 μm, 3 μm, 3 μm (gelatin), and 1.2 μm). The SARS-CoV-2 positive air samples were compared with the positive samples collected by individual student campus track tracing methods using PCR testing on saliva and nasopharyngeal samples. The results show a detection rate of 73% in the unknown environment and a 78% detection rate in the known dorm. Our data show that the virus was detectable with all the sampling methods we employed. However, the AerosolSense sampler and BioSampler performed the best at 63% and 61% detection rates, compared to 25% for the Filter Cassettes and 23% for the Button Sampler. Despite the success rate, it is not possible to definitively conclude which method is most sensitive due to the limited number of samples. These results show that with careful sampling and optimized PCR methods, pathogenic respiratory viruses can be detected in large buildings using HVAC return air.
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Affiliation(s)
- Sinan Sousan
- Department of Public Health, Brody School of Medicine, East Carolina University, Greenville, NC, 27834, USA; North Carolina Agromedicine Institute, Greenville, NC, 27834, USA.
| | - Marina Boatman
- Department of Public Health, Brody School of Medicine, East Carolina University, Greenville, NC, 27834, USA; Department of Health Services and Information Management, College of Allied Health, East Carolina University, Greenville, NC, 27834, USA; Department of Microbiology & Immunology, Brody School of Medicine, 5E-106A, East Carolina University, Greenville, NC, 27834, USA
| | - Lauren Johansen
- Department of Public Health, Brody School of Medicine, East Carolina University, Greenville, NC, 27834, USA; Department of Health Education and Promotion, College of Health and Human Performance, East Carolina University, Greenville, NC, 27834, USA; Department of Microbiology & Immunology, Brody School of Medicine, 5E-106A, East Carolina University, Greenville, NC, 27834, USA
| | - Ming Fan
- Department of Microbiology & Immunology, Brody School of Medicine, 5E-106A, East Carolina University, Greenville, NC, 27834, USA
| | - Rachel L Roper
- Department of Microbiology & Immunology, Brody School of Medicine, 5E-106A, East Carolina University, Greenville, NC, 27834, USA
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Yerlikaya S, Broger T, Isaacs C, Bell D, Holtgrewe L, Gupta-Wright A, Nahid P, Cattamanchi A, Denkinger CM. Blazing the trail for innovative tuberculosis diagnostics. Infection 2024; 52:29-42. [PMID: 38032537 PMCID: PMC10811035 DOI: 10.1007/s15010-023-02135-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 11/01/2023] [Indexed: 12/01/2023]
Abstract
The COVID-19 pandemic brought diagnostics into the spotlight in an unprecedented way not only for case management but also for population health, surveillance, and monitoring. The industry saw notable levels of investment and accelerated research which sparked a wave of innovation. Simple non-invasive sampling methods such as nasal swabs have become widely used in settings ranging from tertiary hospitals to the community. Self-testing has also been adopted as standard practice using not only conventional lateral flow tests but novel and affordable point-of-care molecular diagnostics. The use of new technologies, including artificial intelligence-based diagnostics, have rapidly expanded in the clinical setting. The capacity for next-generation sequencing and acceptance of digital health has significantly increased. However, 4 years after the pandemic started, the market for SARS-CoV-2 tests is saturated, and developers may benefit from leveraging their innovations for other diseases; tuberculosis (TB) is a worthwhile portfolio expansion for diagnostics developers given the extremely high disease burden, supportive environment from not-for-profit initiatives and governments, and the urgent need to overcome the long-standing dearth of innovation in the TB diagnostics field. In exchange, the current challenges in TB detection may be resolved by adopting enhanced swab-based molecular methods, instrument-based, higher sensitivity antigen detection technologies, and/or artificial intelligence-based digital health technologies developed for COVID-19. The aim of this article is to review how such innovative approaches for COVID-19 diagnosis can be applied to TB to have a comparable impact.
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Affiliation(s)
- Seda Yerlikaya
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany.
| | - Tobias Broger
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany
| | | | - David Bell
- Independent Consultant, Lake Jackson, TX, USA
| | - Lydia Holtgrewe
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany
| | - Ankur Gupta-Wright
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany
- Institute for Global Health, University College London, London, UK
| | - Payam Nahid
- UCSF Center for Tuberculosis, University of California San Francisco, San Francisco, CA, USA
| | - Adithya Cattamanchi
- UCSF Center for Tuberculosis, University of California San Francisco, San Francisco, CA, USA
- Division of Pulmonary Diseases and Critical Care Medicine, University of California Irvine, Irvine, CA, USA
| | - Claudia M Denkinger
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany
- German Centre for Infection Research, Partner Site Heidelberg University Hospital, Heidelberg, Germany
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Schuchmann P, Scheuch G, Naumann R, Keute M, Lücke T, Zielen S, Brinkmann F. Exhaled aerosols among PCR-confirmed SARS-CoV-2-infected children. Front Pediatr 2023; 11:1156366. [PMID: 37152322 PMCID: PMC10160682 DOI: 10.3389/fped.2023.1156366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Accepted: 04/03/2023] [Indexed: 05/09/2023] Open
Abstract
Background Available data on aerosol emissions among children and adolescents during spontaneous breathing are limited. Our aim was to gain insight into the role of children in the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and whether aerosol measurements among children can be used to help detect so-called superspreaders-infected individuals with extremely high numbers of exhaled aerosol particles. Methods In this prospective study, the aerosol concentrations of SARS-CoV-2 PCR-positive and SARS-CoV-2 PCR-negative children and adolescents (2-17 years) were investigated. All subjects were asked about their current health status and medical history. The exhaled aerosol particle counts of PCR-negative and PCR-positive subjects were measured using the Resp-Aer-Meter (Palas GmbH, Karlsruhe, Germany) and compared using linear regression. Results A total of 250 children and adolescents were included in this study, 105 of whom were SARS-CoV-2 positive and 145 of whom were SARS-CoV-2 negative. The median age in both groups was 9 years (IQR 7-11 years). A total of 124 (49.6%) participants were female, and 126 (50.4%) participants were male. A total of 81.9% of the SARS-CoV-2-positive group had symptoms of viral infection. The median particle count of all individuals was 79.55 particles/liter (IQR 44.55-141.15). There was a tendency for older children to exhale more particles (1-5 years: 79.54 p/L; 6-11 years: 77.96 p/L; 12-17 years: 98.63 p/L). SARS-CoV-2 PCR status was not a bivariate predictor (t = 0.82, p = 0.415) of exhaled aerosol particle count; however, SARS-CoV-2 status was shown to be a significant predictor in a multiple regression model together with age, body mass index (BMI), COVID-19 vaccination, and past SARS-CoV-2 infection (t = 2.81, p = 0.005). COVID-19 vaccination status was a highly significant predictor of exhaled aerosol particles (p < .001). Conclusion During SARS-CoV-2 infection, children and adolescents did not have elevated aerosol levels. In addition, no superspreaders were found.
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Affiliation(s)
- Pia Schuchmann
- Department of Children and Adolescents, University Children’s Hospital, Ruhr University of Bochum, Bochum, Germany
- Pediatric Practice (Dr. Voigt, Dr. Heier), Stadtbergen, Germany
- Correspondence: Pia Schuchmann
| | - Gerhard Scheuch
- GS Bio-Inhalation GmbH, Headquarters & Logistics, Gemuenden, Germany
| | | | - Marius Keute
- Independent Statistical Consultant, Warendorf, Germany
| | - Thomas Lücke
- Department of Children and Adolescents, University Children’s Hospital, Ruhr University of Bochum, Bochum, Germany
| | - Stefan Zielen
- Department for Children and Adolescents, Allergology, Pulmonology and Cystic Fibrosis, University Hospital, Goethe University, Frankfurt, Germany
| | - Folke Brinkmann
- Department of Pediatric Pneumology, University Children's Hospital, Ruhr University of Bochum, Bochum, Germany
- Department of Pediatric Pneumology and Allergology, University Children’s Hospital Schleswig-Holstein, Lübeck, Germany
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