A review on cutinases enzyme in degradation of microplastics

Microplastic pollution in the littoral environment: insights from the largest Mediterranean Sabellaria spinulosa (Annelida) reef and shoreface sediments

Littoral environments represent the main entry point for pollutants into the sea. Microplastics (MPs) are a growing concern, especially for the Mediterranean basin characterized by densely populated coasts and a semi-enclosed morphology. This article targets MPs associated with a unique coastal habitat - the largest bioconstruction in the Mediterranean (Torre Mileto, Southern Adriatic Sea) built by the reef-building polychaete Sabellaria spinulosa (anellida). We assessed MPs abundance in samples from both bioconstruction and surrounding sediments using stereomicroscopy with UV light and micro-Raman spectroscopy. MPs distribution was analyzed according to substrate (reef vs. sediment), longshore drift (west vs. east side), and reef morphology (hummock vs. platform). Results showed a significantly higher MPs abundance in samples from the western side of the site, potentially related to a longshore drift influence on pollutant distribution. By contrast, no significant differences in MPs abundances were observed in substrates (reefs vs. surrounding sediments) and in reef morphologies (hummock vs. platform), which suggest no direct control of reef-building activity in accumulating MPs. The passive accumulation of MPs, primarily driven by wave action, is likely the main factor explaining the MPs distribution. Micro-Raman Spectroscopy analysis revealed polyethylene terephthalate as the dominant polymer, and fibers as the most abundant morphology; prevalent MPs colors were colorless and black. Data provided here indicate that polychaete reefs temporarily trap MPs, retaining such pollutant in the littoral environment. The mechanism of MPs passive accumulation observed in this study raises questions about the growing risk for this bio-engineered benthic habitats.

Geographical distribution of plastic items in the mountains of Lombardy region-Northern Italy

Mountain environments are becoming receptacles for plastic pollution due to the increasing use and improper disposal of plastic products. However, data on plastic occurrence in mountain ecosystems remains scarce. This study fills this gap by providing an assessment of plastic waste distribution in high-altitude landscapes. We collected plastic items (both mesoplastics and macroplastics) along 28 transects in the Alps and Prealps of Lombardy - Northern Italy. Items were classified by weight, size, original use, and polymer composition. GPS coordinates of plastic item positions were recorded along 21 of these transects. Plastic items (979 overall) were found along all the transects. On average (± standard error), 34.96 ± 5.10 plastic items per transect were found, corresponding to 24.30 ± 37.29 g km-1. Polypropylene (24.92 %), polyethylene (15.71 %), and polyvinyl chloride (10.83 %) were the most abundant polymers, while food packaging (31 %), mountain clothes (5 %), health care (5 %), and mountain equipment (4 %) were the most represented original uses. In-situ abandonment seems, therefore, the predominant source of plastic waste along mountain paths. Plastic distribution seems not related to the presence of mountain refuges (i.e., staffed mountain structures), altitude, geographical position, or frequentation of the transects (assessed using STRAVA tracks). However, the mean number of items decreased from the start to the end of the transects, with most items found in the first km. Straightforward policies, such as placing recycling bins at the start of mountain paths, promoting portable trash cans for backpackers, and conducting awareness campaigns against plastic abandonment, could effectively reduce plastic dispersion in mountain areas.

Biochemical Characterization and Polyester-Binding/Degrading Capability of Two Cutinases from Aspergillus fumigatus

Two recombinant cutinases, AfCutA and AfCutB, derived from Aspergillus fumigatus, were heterologously expressed in Pichia pastoris and systematically characterized for their biochemical properties and polyester-degrading capabilities. AfCutA demonstrated superior catalytic performance compared with AfCutB, displaying higher optimal pH (8.0-9.0 vs. 7.0-8.0), higher optimal temperature (60 °C vs. 50 °C), and greater thermostability. AfCutA exhibited increased hydrolytic activity toward p-nitrophenyl esters (C4-C16) and synthetic polyesters. Additionally, AfCutA released approximately 3.2-fold more acetic acid from polyvinyl acetate (PVAc) hydrolysis than AfCutB. Quartz crystal microbalance with dissipation monitoring (QCM-D) revealed rapid adsorption of both enzymes onto polyester films. However, their adsorption capacity on poly (ε-caprolactone) (PCL) films was significantly higher than on polybutylene succinate (PBS) films, and was influenced by pH. Comparative modeling of catalytic domains identified distinct structural differences between the two cutinases. AfCutA possesses a shallower substrate-binding cleft, fewer acidic residues, and more extensive hydrophobic regions around the active site, potentially explaining its enhanced interfacial activation and catalytic efficiency toward synthetic polyester substrates. The notably superior performance of AfCutA suggests its potential as a biocatalyst in industrial applications, particularly in polyester waste bioremediation and sustainable polymer processing.

Optimized enzymatic PLA hydrolysis by a recombinant fungal cutinase: A step towards a closed PLA cycle

Polylactide (PLA) occupies the first position in the global production market of bioplastics, generating a large amount of waste. Cutinases have high potential to depolymerize plastic polyesters like PLA, since cutin, their natural substrate, is structurally similar. Here, the cutinase secreted by Fusarium solani (FsC) was heterologously produced in high yields, and its hydrolytic efficiency on PLA polymers of different stereochemistry, crystallinity, and polymerization degree was evaluated. Under the conditions tested, FsC proved to be enantioselective, with poly(D,L-lactic acid) (PDLLA) as its best substrate and no activity on poly(L-lactic acid) (PLLA). The hydrolysis of PDLLA was optimized by Response Surface Methodology (p-value <0.0001). After optimization, over 8 g/L of lactic acid were recovered from 10 g/L PDLLA in 15 h at 50 °C. This outstanding performance highlights the potential of FsC for its further improvement through computational design, with a focus on broadening its activity range or substrate versatility.

Perspectives on the microorganisms with the potentials of PET-degradation

Polyethylene terephthalate (PET), a widely used synthetic polymer in daily life, has become a major source of post-consumer waste due to its complex molecular structure and resistance to natural degradation, which has posed a significant threat to the global ecological environment and human health. Current PET-processing methods include physical, chemical, and biological approaches, however each have their limitations. Given that numerous microbial strains exhibit a remarkable capacity to degrade plastic materials, microbial degradation of PET has emerged as a highly promising alternative. This approach not only offers the possibility of converting waste into valuable resources but also contributes to the advancement of a circular economy. Therefore in this review, it is mainly focused on the cutting-edge microbial technologies and the key role of specific microbial strains such as Ideonella sakaiensis 201-F6, which can efficiently degrade and assimilate PET. Particularly noteworthy are the catalytic enzymes related to the metabolism of PET, which have been emphasized as a sustainable and eco-friendly strategy for plastic recycling within the framework of a circular economy. Furthermore, the study also elucidates the innovative utilization of degraded plastic materials as feedstock for the production of high-value chemicals, highlighting a sustainable path forward in the management of plastic waste.

Dynamic changes of leachates of aged plastic debris under different suspended sand concentrations and their toxicity

Plastic pollution in aquatic environments poses significant ecological risks, particularly through released leachates. While traditional or non-biodegradable plastics (non-BPs) are well-studied, biodegradable plastics (BPs) have emerged as alternatives that are designed to degrade more rapidly within the environment. However, research on the ecological risks of the leachates from aged BPs in aquatic environments is scarce. This controlled laboratory study investigated the leachate release processes and associated toxicity of traditional non-BPs, i.e., polyethylene terephthalate (PET) and polypropylene (PP) and BPs, i.e., polylactic acid (PLA) combined with polybutylene adipate terephthalate (PBAT) and starch-based plastic (SBP) under different aging time and suspended sand concentrations (0, 50, 100, 250, and 500 mg/L). The results indicated that BPs release significantly higher levels of dissolved organic carbon (DOC) than those of non-BPs, particularly at elevated suspended sand concentrations. The DOC concentrations in PLA+PBAT leachate reached 2.69 mg/L, surpassing those of PET and PP. Additionally, BPs released organic matter of larger molecular weight and protein-like substances. Toxicity tests showed that leachates from BPs inhibited the activity of Daphnia magna more than those from non-BPs. At a suspended sand concentration of 500 mg/L, PLA+PBAT leachate caused a 30 % inhibitory rate of Daphnia magna. Despite enhanced degradability, leachates from BPs may pose increased environmental risks in ecosystems with high suspended sand concentrations. Comprehensive ecological risk assessments are essential for effectively managing and mitigating these hazards of plastic pollution.

Using Insect Larvae and Their Microbiota for Plastic Degradation

Plastic pollution is one of the biggest current global threats to the environment given that petroleum-based plastic is recalcitrant and can stay in the environment for decades, even centuries, depending on the specific plastic type. Since less than 10% of all plastic made is recycled, and the other solutions (such as incineration or landfill storage) are pollutant methods, new, environmentally friendly solutions are needed. In this regard, the latest biotechnological discovery on this topic is the capability of insect larvae to use plastic polymers as carbon feedstock. This present review describes the most relevant information on the insect larvae capable of degrading plastic, mainly Galleria mellonella (Fabricius, 1798), Tenebrio molitor (Linnaeus, 1758), and Zophobas atratus (Fabricius, 1776), and also adds new information about other less commonly studied "plastivore" insects such as termites. This review covers the literature from the very first work describing plastic degradation by larvae published in 2014 all the way to the very latest research available (till June 2024), focusing on the identification of a wide variety of plastic-degrading microorganisms isolated from larvae guts and on the understanding of the potential molecular mechanisms present for degradation to take place. It also describes the latest discoveries, which include the identification of novel enzymes from waxworm saliva.

Hydrolysis rate and mechanism of water-dispersed polyesters with different sulfonate group contents in the cutinase-catalyzed system

Water-dispersed polyester (WPET) has irreplaceable and wide application prospects in the textile field, but it is easy to form printing and dyeing wastewater during traditional fabric treatment. In this paper, cutinase-catalyzed green hydrolysis of WPET was achieved. The main purpose of this paper is to study the difference between two PEG-free WPETs with different -SO3- content in the cutinase-catalyzed hydrolysis process. Differences in solution properties, enzyme activity, SSIPA, and TPA release as well as functional groups and thermal properties of the hydrolysis products of the systems during cutinase hydrolysis were analyzed in detail for 14.1 % S-0 % PEG and 9.5 % S-0 % PEG. Results show that the structure of WPET has an influential effect on its hydrolysis rate in cutinase-catalyzed systems, which mainly originates from the -SO3- content. SSIPA released by WPET during hydrolysis has an inhibitory effect on cutinase enzyme activity. The hydrolysis process of WPET with higher -SO3- content releases more SSIPA, which in turn inhibits the enzyme activity of cutinase in the reaction system, ultimately leading to a slower hydrolysis rate of WPET. These findings provide new ideas for cutinase to target WPETs with different structures and are important for the green development of the textile industry.

Harnessing bio and (Photo)catalysts for microplastics degradation and remediation in soil environment

Soil pollution by microplastics (MPs) is an escalating environmental crisis with far-reaching consequences. However, current research on the degradation and/or remediation of MPs has mainly focused on water-simulated environments, with little attention given to soil MPs. Therefore, the review explores such terrestrial territory, exploring the potential of biodegradation and novel photocatalytic technologies for MPs degradation/remediation in soil. This review comprehensively investigates the potential of biological and photocatalytic approaches for soil MPs degradation and remediation. A temporal analysis of research from 2004 to 2024 highlights the increasing focus on this critical issue. The review explores the biocatalytic roles of diverse enzymes, including cutinase, PETase, MHETase, hydrolase, lipase, laccase, lignin peroxidase, and Mn-peroxidase, in MPs degradation. Strategies for enzyme engineering, such as protein engineering and immobilization, are explored to enhance catalytic efficiency. The potential for developing enzyme consortia for optimized MP degradation is also discussed. Photocatalytic remediation using TiO2, ZnO, clay, hydrogel, and other photocatalysts is examined, emphasizing their mechanisms and effectiveness. Computational modeling is proposed to deepen understanding of soil MPs-catalyst interactions, primarily aiming to develop novel catalysts tailored for soil environments for environmental safety and sustainable restoration. A comparative analysis of biological and photocatalytic approaches evaluates their environmental implications and the potential for synergistic combinations, with emphasis on soil quality protection, restoration and impact on soil ecosystems. Hence, this review accentuates the urgent need for innovative solutions to address MPs pollution in soil and provides a foundational understanding of the current knowledge gaps, as well as paves the way for future research and development.

BhrPETase catalyzed polyethylene terephthalate depolymerization: A quantum mechanics/molecular mechanics approach

Polyethylene terephthalate (PET) is a widely used material in our daily life, particularly in areas such as packaging, fibers, and engineering plastics. However, PET waste can accumulate in the environment and pose a great threat to our ecosystem. Recently enzymatic conversion has emerged as an efficient and green strategy to address the PET crisis. Here, using a theoretical approach combining molecular dynamics simulation and quantum mechanics/molecular mechanics calculations, the depolymerization mechanism of the thermophilic cutinase BhrPETase was fully deciphered. Surprisingly, unlike the previously studied cutinase LCCICCG, our results indicate that the first step, catalytic triad assisted nucleophilic attack, is the rate-determining step. The corresponding Boltzmann weighted average energy barrier is 18.2 kcal/mol. Through extensive comparison between BhrPETase and LCCICCG, we evidence that key features like charge CHis@N1 and angle APET@C1-Ser@O1-His@H1 significantly impact the depolymerization efficiency of BhrPETase. Non-covalent bond interaction and distortion/interaction analysis inform new insights on enzyme engineer and may aid the recycling of enzymatic PET waste. This study will aid the advancement of the plastic bio-recycling economy and promote resource conservation and reuse.

Hotspots lurking underwater: Insights into the contamination characteristics, environmental fates and impacts on biogeochemical cycling of microplastics in freshwater sediments

The widespread presence of microplastics (MPs) in aquatic environments has become a significant concern, with freshwater sediments acting as terminal sinks, rapidly picking up these emerging anthropogenic particles. However, the accumulation, transport, degradation and biochemical impacts of MPs in freshwater sediments remain unresolved issues compared to other environmental compartments. Therefore, this paper systematically revealed the spatial distribution and characterization information of MPs in freshwater (rivers, lakes, and estuaries) sediments, in which small-size (<1 mm), fibers, transparent, polyethylene (PE), and polypropylene (PP) predominate, and the average abundance of MPs in river sediments displayed significant heterogeneity compared to other matrices. Next, the transport kinetics and drivers of MPs in sediments are summarized, MPs transport is controlled by the particle diversity and surrounding environmental variability, leading to different migration behaviors and transport efficiencies. Also emphasized the spatio-temporal evolution of MPs degradation processes and biodegradation mechanisms in sediments, different microorganisms can depolymerize high molecular weight polymers into low molecular weight biodegradation by-products via secreting hydrolytic enzymes or redox enzymes. Finally, discussed the ecological impacts of MPs on microbial-nutrient coupling in sediments, MPs can interfere with the ecological balance of microbially mediated nutrient cycling by altering community networks and structures, enzyme activities, and nutrient-related functional gene expressions. This work aims to elucidate the plasticity characteristics, fate processes, and potential ecological impact mechanisms of MPs in freshwater sediments, facilitating a better understanding of environmental risks of MPs in freshwater sediments.

Microbial Immobilized Enzyme Biocatalysts for Multipollutant Mitigation: Harnessing Nature's Toolkit for Environmental Sustainability

The ever-increasing presence of micropollutants necessitates the development of environmentally friendly bioremediation strategies. Inspired by the remarkable versatility and potent catalytic activities of microbial enzymes, researchers are exploring their application as biocatalysts for innovative environmental cleanup solutions. Microbial enzymes offer remarkable substrate specificity, biodegradability, and the capacity to degrade a wide array of pollutants, positioning them as powerful tools for bioremediation. However, practical applications are often hindered by limitations in enzyme stability and reusability. Enzyme immobilization techniques have emerged as transformative strategies, enhancing enzyme stability and reusability by anchoring them onto inert or activated supports. These improvements lead to more efficient pollutant degradation and cost-effective bioremediation processes. This review delves into the diverse immobilization methods, showcasing their success in degrading various environmental pollutants, including pharmaceuticals, dyes, pesticides, microplastics, and industrial chemicals. By highlighting the transformative potential of microbial immobilized enzyme biocatalysts, this review underscores their significance in achieving a cleaner and more sustainable future through the mitigation of micropollutant contamination. Additionally, future research directions in areas such as enzyme engineering and machine learning hold immense promise for further broadening the capabilities and optimizing the applications of immobilized enzymes in environmental cleanup.

Changes in Soil Microbial Communities Induced by Biodegradable and Polyethylene Mulch Residues Under Three Different Temperatures

Mulching is a common method increasing crop yield and achieving out-of-season production; nevertheless, their removal poses a significant environmental danger. In this scenario, the use of biodegradable plastic mulches comes up as a solution to increase the sustainability of this practice, as they can be tilled in soil without risk for the environment. In this context, it is important to study the microbial response to this practice, considering their direct involvement in plastic biodegradation. This study evaluated the biodegradation of three commercial mulch residues: one conventional non-biodegradable mulch versus two biodegradable ones (white and black compostable Mater-Bi mulches). The experiment was conducted under three incubation temperatures (room temperature 20-25 °C, 30 °C, and 45 °C) for a 6-month trial using fallow agricultural soil. Soil without plastic mulch residues was used as a control. White mater-bi biodegradable mulch residues showed higher degradation rates up to 88.90% at 30 °C, and up to 69.15% at room temperature. Furthermore, incubation at 45 °C determines the absence of degradation for all types of mulch considered. Moreover, bacterial alpha diversity was primarily influenced by plastic type and temperature, while fungal populations were mainly affected by temperature. Beta diversity was impacted by all experimental variables. Predicted functional genes crucial for degrading complex substrates, including those encoding hydrolases, cutinases, cellobiosidases, and lipases, were derived from 16S rRNA gene sequencing data. Cluster analysis based on predicted enzyme-encoding gene abundance revealed two clusters, mainly linked to sampling time. Finally, core microbiome analysis identified dominant bacterial and fungal taxa in various soil-plastic ecosystems during degradation, pinpointing species potentially involved in plastic breakdown. The present study allows an assessment of how different temperatures affect the degradation of mulch residues in soil, providing important insights for different climatic growing zones. It also fills a gap in the literature by directly comparing the effects of biodegradable and polyethylene mulches on soil microbial communities.

Macrogenomes reveal microbial-mediated microplastic degradation pathways in the porcine gut: a hope for solving the environmental challenges of microplastics

It is increasingly recognized that microplastics (MPs) are being transmitted through the food chain system, but little is known about the microorganisms involved in MP degradation, functional biodegradation genes, and metabolic pathways of degradation in the intestinal tract of foodborne animals. In this study, we explored the potential flora mainly involved in MP degradation in the intestinal tracts of Taoyuan, Duroc, and Xiangcun pigs by macrogenomics, screened relevant MP degradation genes, and identified key enzymes and their mechanisms. The pig colon was enriched with abundant MP degradation-related genes, and gut microorganisms were their main hosts. The fiber diet did not significantly affect the abundance of MP degradation-related genes but significantly reduced their diversity. We identified a total of 94 functional genes for MP degradation and classified them into 27 categories by substrate type, with polystyrene (PS), polyethylene terephthalate (PET), and di(2-ethylhexyl) phthalate (DEHP) were the most predominant degradation types. The MP degradation functional genes were widely distributed in a variety of bacteria, mainly in the phylum Firmicutes and Bacteroidetes. Based on the identified functional genes for MP degradation, we proposed a hypothetical degradation mechanism for the three major MP pollutants, namely, PS, PET, and DEHP, which mainly consist of oxidoreductase, hydrolase, transferase, ligase, laccase, and isomerase. The degradation process involves the breakdown of long polymer chains, the oxidation of short-chain oligomers, the conversion of catechols, and the achievement of complete mineralization. Our findings provide insights into the function of MP degradation genes and their host microorganisms in the porcine colon.

Insight into microplastics in the aquatic ecosystem: Properties, sources, threats and mitigation strategies

Globally recognized as emergent contaminants, microplastics (MPs) are prevalent in aquaculture habitats and subject to intense management. Aquaculture systems are at risk of microplastic contamination due to various channels, which worsens the worldwide microplastic pollution problem. Organic contaminants in the environment can be absorbed by and interact with microplastic, increasing their toxicity and making treatment more challenging. There are two primary sources of microplastics: (1) the direct release of primary microplastics and (2) the fragmentation of plastic materials resulting in secondary microplastics. Freshwater, atmospheric and marine environments are also responsible for the successful migration of microplastics. Until now, microplastic pollution and its effects on aquaculture habitats remain insufficient. This article aims to provide a comprehensive review of the impact of microplastics on aquatic ecosystems. It highlights the sources and distribution of microplastics, their physical and chemical properties, and the potential ecological consequences they pose to marine and freshwater environments. The paper also examines the current scientific knowledge on the mechanisms by which microplastics affect aquatic organisms and ecosystems. By synthesizing existing research, this review underscores the urgent need for effective mitigation strategies and further investigation to safeguard the health and sustainability of aquatic ecosystems.