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Guo J, Luo W, Wu X, Li Y, Liu Z, Fang H, Chen Q, Li E, Wang Y. Stochastic and deterministic mechanisms jointly drive the assembly of microbial communities in cold-rolling wastewater across China. JOURNAL OF HAZARDOUS MATERIALS 2025; 491:137925. [PMID: 40086244 DOI: 10.1016/j.jhazmat.2025.137925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2025] [Revised: 02/26/2025] [Accepted: 03/10/2025] [Indexed: 03/16/2025]
Abstract
Microorganisms play a pivotal role in industrial wastewater treatment, serving as a critical barrier to water purification and safeguarding human and environmental health. Despite their importance, the biogeographic distribution and assembly mechanisms of microbial communities in cold-rolling wastewater treatment systems remain poorly understood. This study analyzed 101 microbial samples from nine regions using high-throughput sequencing, revealing rich microbial diversity and distinct regional aggregation patterns. Random forest analysis identified key biomarkers, often low-abundance species, while a unique core microbial community was strongly correlated with pollutant removal efficiencies, including chemical oxygen demand (COD), total organic carbon (TOC), and total nitrogen (TN). Neutral community model analysis demonstrated that microbial community assembly is driven by both stochastic and deterministic processes. Co-occurrence network analysis further highlighted o__1-20 and g__Ellin6067 as pivotal taxa influencing community structure. Among environmental factors, nitrite nitrogen (NO₂-N) and COD were identified as critical drivers of community assembly. This study provides the first comprehensive characterization of microbial biogeographic patterns in cold-rolling wastewater treatment plants across China. The findings deepen our understanding of microbial diversity, distribution, and community dynamics in industrial wastewater systems, offering valuable insights for optimizing treatment processes.
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Affiliation(s)
- Jingjing Guo
- State Key Laboratory of Advanced Environmental Technology, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei 230026, China
| | - Wulong Luo
- Ma'anshan Iron and Steel Co., Ltd., Ma'anshan, 243003, China
| | - Xiaowen Wu
- State Key Laboratory of Advanced Environmental Technology, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei 230026, China
| | - Yong Li
- Baowu Water Technology Co., Ltd, Shanghai, 201999, China; Baowu Group Environmental Resources Technology Co., Ltd, Shanghai, 201900, China
| | - Zimin Liu
- Ma'anshan Iron and Steel Co., Ltd., Ma'anshan, 243003, China
| | - Hui Fang
- Baowu Water Technology Co., Ltd, Shanghai, 201999, China; Baowu Group Environmental Resources Technology Co., Ltd, Shanghai, 201900, China
| | - Qi Chen
- Baowu Water Technology Co., Ltd, Shanghai, 201999, China; Baowu Group Environmental Resources Technology Co., Ltd, Shanghai, 201900, China
| | - Enchao Li
- Baowu Water Technology Co., Ltd, Shanghai, 201999, China; Baowu Group Environmental Resources Technology Co., Ltd, Shanghai, 201900, China.
| | - Yunkun Wang
- State Key Laboratory of Advanced Environmental Technology, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei 230026, China.
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Qian L, Wang J, Shi Y, Lu Y, Liang R, Xu Q, Zhou X, Li X, Shao X. A novel tiered ecological risk framework linking metal-driven pollution to soil microbial dynamics in a fragile ecosystem. JOURNAL OF HAZARDOUS MATERIALS 2025; 494:138563. [PMID: 40373402 DOI: 10.1016/j.jhazmat.2025.138563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2025] [Revised: 04/19/2025] [Accepted: 05/08/2025] [Indexed: 05/17/2025]
Abstract
Widespread soil heavy metal (HM) pollution has caused great concerns worldwide. A refined and cost-effective ecological risk assessment (ERA) is critical for managing these risks. Herein, we propose a novel tiered ERA framework to evaluate indigenous pollution-effect associations in contaminated soils. This framework progressively applies source apportionment, spatial regression, deterministic and probabilistic risk characterization, ecological surveys of soil phospholipid fatty acids (PLFAs), and successive multivariable statistics to provide comprehensive ERA evidence, as demonstrated in an ecologically fragile mining area. The risk screening phase identified Zn, Pb, Cd, Cu, and Hg as priority contaminants, and mining activities contributed 86.5 % (Zn), 87.2 % (Pb), 83.3 % (Cd), 64.6 % (Cu), and 52.3 % (Hg) of the total soil concentrations in the study area determined by the positive matrix factorization (PMF) model. The risk quotient of ecological criteria tailored to different land uses exhibited ecologically relevant risk grading. The risk quantification phase determined the overall risk probabilities to be 53.98 %, 11.12 %, 9.69 %, 5.03 % and 1.34 % for Zn, Pb, Cu, Cd and Hg, respectively, and provided adaptive HM priority lists with different risk grades. The risk causeeffect attribution phase confirmed that HMs significantly reduced soil fungal PLFA abundance and indirectly altered the PLFA structure by decreasing the soil pH. The proposed framework offers a cost-effective, refined and feasible technical support for ecological risk management in contaminated areas.
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Affiliation(s)
- Li Qian
- State Key Laboratory for Ecological Security of Regions and Cities, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Jinghan Wang
- State Key Laboratory for Ecological Security of Regions and Cities, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Yajuan Shi
- State Key Laboratory for Ecological Security of Regions and Cities, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Yonglong Lu
- Key Laboratory of the Ministry of Education for Coastal Wetland Ecosystems and Fujian Provincial Key Laboratory of Land and Ocean Interface, College of the Environment and Ecology, Xiamen University, Fujian 361102, China; Stake Key Laboratory of Marine Environmental Science, Xiamen University, Fujian 361102, China
| | - Ruoyu Liang
- Key Laboratory of Integrated Regulation and Resource Development On Shallow Lake of Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China
| | - Qiuyun Xu
- Biogas Institute of Ministry of Agriculture and Rural Affairs, Chengdu 610041, China
| | - Xuan Zhou
- State Key Laboratory for Ecological Security of Regions and Cities, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xuan Li
- State Key Laboratory for Ecological Security of Regions and Cities, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiuqing Shao
- State Key Laboratory for Ecological Security of Regions and Cities, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
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Guan A, Peng Q, Zhang W, Qi W, Hu C, Qu J. Distinct response of nitrogen metabolism to exogenous cadmium (Cd) in river sediments with and without Cd contamination history. WATER RESEARCH 2025; 274:123104. [PMID: 39793158 DOI: 10.1016/j.watres.2025.123104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2024] [Revised: 12/13/2024] [Accepted: 01/06/2025] [Indexed: 01/13/2025]
Abstract
The role of metal resistance on nitrogen metabolism function and community resilience against Cd is important for elucidating the evolutionary dynamics of key ecological functions in river ecosystems. In this study, the response of nitrogen transforming function to Cd exposure in river sediments from the Yangtze River Basin with varying levels of heavy metal contamination history (Cd-contaminated and Cd-free sediments) was compared to understand how Cd influenced nitrogen metabolism under varying metal resistance conditions. The results showed that chronic and persistent Cd pollution of sediments caused an elevation of transport efflux metal resistance genes (MRGs) and a reduction in the uptake MRGs, leading to a stronger tolerance to Cd for Cd-contaminated sediment than Cd-free ones. Specifically, denitrification, anaerobic ammonium oxidation (anammox) and dissimilatory nitrate reduction to ammonium (DNRA) respectively responded to Cd through different mechanisms. Exogenous Cd (5-100 mg kg-1) influenced denitrification rates (-70 %-100 % deviation to control group) by regulating key genera (Thiobacillus, Magnetospirillum, Sideroxydans etc.) and gene clusters for denitrification. Both adaptive nature of anammox bacteria and co-regulation of key genera (Candidatus_Scalindua, Candidatus_Jettenia, Planctomyces etc.) and gene hzsA were drivers of differential responses in sediments from various contamination history. Environmental factors rather than contamination history, key genera or genes were probably critical ones determining Cd-resistance in DNRA, being more tolerant to Cd in sediments with higher TOC and NH4+. Stimulation of N2O reduction process (genera Gemmatimonas and Gemmatirosa and genes nosZ) in Cd-contaminated sediments by exogenous Cd lowered N2O emission risk, whereas the reverse was true for Cd-free sediments. These results enrich our understanding about the linkages among MRGs and nitrogen reduction functions in river.
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Affiliation(s)
- Aomei Guan
- Key Laboratory of Drinking Water Science and Technology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; China Academy of Urban Planning & Design, Beijing 100044, China
| | - Qiang Peng
- Key Laboratory of Drinking Water Science and Technology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Weihang Zhang
- Key Laboratory of Drinking Water Science and Technology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Weixiao Qi
- Center for Water and Ecology, State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China.
| | - Chengzhi Hu
- Key Laboratory of Drinking Water Science and Technology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Jiuhui Qu
- Key Laboratory of Drinking Water Science and Technology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
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Tudi M, Yang L, Wang L, Wei B, Gu L, Yu J, Li H, Xue Y, Wang F, Li L, Yu QJ, Ruan HD, Connell D. Simulating the effects of drip and flood irrigation on the leaching, migration, and redistribution of heavy metals in contaminated soil. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2025; 294:118057. [PMID: 40107218 DOI: 10.1016/j.ecoenv.2025.118057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2024] [Revised: 03/11/2025] [Accepted: 03/13/2025] [Indexed: 03/22/2025]
Abstract
BACKGROUND The extensive adoption of drip irrigation globally has adverse effects on the ecological integrity of soil, leading to significant changes in the distribution of heavy metals and other pollutants across various soil layers. However, the mechanisms underlying such changes are still unclear. PURPOSE This study explores the effects of different irrigation methods (drip and flood irrigation) on the heavy metal behaviors in contaminated soils, including leaching, migration, and redistribution within agricultural practices. MATERIALS AND METHODS The soil column leaching experiments simulating drip and flood irrigation were performed. The correlation tests and one-way analysis of variance were used for data analysis. RESULTS Compared to flood irrigation, drip irrigation resulted in higher leaching; as high as twice of heavy metal redistribution across soil columns. The average changes in heavy metal concentration before and after drip irrigation and flood irrigation were 16.3 % and 3.3 %, respectively. The soil redox potential and contact time were the main factors affecting the migration of heavy metals during the initial stages of irrigation implementation; however, hydrodynamic factors were also influential. CONCLUSION Drip irrigation may pose a serious threat to food safety in the areas with considerable heavy metal pollution due to increased heavy metal leaching and the accumulation of heavy metals near the soil surface, in particular at lower water volume.
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Affiliation(s)
- Muyesaier Tudi
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, No. 11 Datun Road, Beijing 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China; Queensland Micro and Nanotechnology Centre, Brisbane, QLD 4111, Australia; School of Engineering and Built Environment, Griffith University, Brisbane, QLD 4111, Australia
| | - Linsheng Yang
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, No. 11 Datun Road, Beijing 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Li Wang
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, No. 11 Datun Road, Beijing 100101, China.
| | - Binggan Wei
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, No. 11 Datun Road, Beijing 100101, China
| | - Lijuan Gu
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, No. 11 Datun Road, Beijing 100101, China
| | - Jiangping Yu
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, No. 11 Datun Road, Beijing 100101, China
| | - Hairong Li
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, No. 11 Datun Road, Beijing 100101, China
| | - Yuan Xue
- China Astronaut Research and Training Center, No 26, Beiqing Road, Haidian District, Beijing 100094, China
| | - Fang Wang
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 101408, China
| | - Linfeng Li
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Qiming Jimmy Yu
- School of Engineering and Built Environment, Griffith University, Brisbane, QLD 4111, Australia
| | - Huada Daniel Ruan
- Centre for Environment and Human Health, School of Medicine and Dentistry, Griffith University, 170 Kessels Road, Nathan, QLD 4111, Australia
| | - Des Connell
- School of Environment and Science, Griffith University, 170 Kessels Road, Nathan, QLD 4111, Australia
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Yu X, Xu J, Zou Z, Zhang Y, Wu P, Li Q. Differentiation and response mechanisms of the endophytic flora of plants ecologically restored in the ilmenite area. Front Microbiol 2025; 16:1555309. [PMID: 40124888 PMCID: PMC11926159 DOI: 10.3389/fmicb.2025.1555309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2025] [Accepted: 02/14/2025] [Indexed: 03/25/2025] Open
Abstract
Heavy metal contamination in soil is a serious environmental challenge, and abandoned mining areas are of particular concern. In order to rehabilitate the ecology of these areas. In this study, we used ICP-MS and potentiometric method to analyze the soil physicochemical and then endophytic bacteria of remediation plants with the help of 16sRNA sequencing, in order to investigate the ecological remediation of abandoned ilmenite mine and the effect of soil microbiology by seven common plants. The results revealed that the abandonment of ilmenite significantly increased the contents of total phosphorus, total potassium, available potassium, iron, and lead in the surrounding soils. It also affected the richness and diversity of endophytic bacterial communities. Pvi had the highest richness, while Tsi had the lowest richness (P < 0.05). A total of 28 phyla, 69 classes, 171 orders, and 521 genera were identified. A total of nine core OTUs were found: Stenotrophomonas, Chryseobacterium, Lactobacillus, Clostridium_sensu_stricto_12, Prevotella, Lactobacillus, Bradyrhizobium, Nocardioides, and Delftia. Beta diversity analysis revealed that the community structure of the endophytic bacteria differed during the remediation process at the ilmenite site. Functional prediction revealed upregulation of Dco transporter protein function, DNA-binding transcriptional regulators, glyoxalase or related metal-dependent hydrolases, acyl coenzyme A synthetases, ATPase components, amino acid synthesis, and cellular respiration-related functions. Pearson correlation analysis revealed that the SOC, TK, AN, AK, and Zn contents were significantly correlated with α diversity. Redundancy analysis (RDA) revealed that Actinobacteriota was significantly positively correlated with soil SOD, AN, TN, and TK contents. For the first time, this study revealed the interactions among plants, endophytic bacteria and soil pollutants, laying a theoretical basis for screening specific plant endophytic bacteria for ecological restoration.
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Affiliation(s)
- Xin Yu
- Key Laboratory of Coarse Cereal Processing, Ministry of Agriculture and Rural Affairs, Sichuan Engineering and Technology Research Center of Coarse Cereal Industrialization, School of Food and Biological Engineering, Chengdu University, Chengdu, China
| | - Junqiang Xu
- Yunnan Plateau Characteristic Agricultural Industry Research Institute, Yunnan Agricultural University, Kunming, China
| | - Ziping Zou
- Key Laboratory of Coarse Cereal Processing, Ministry of Agriculture and Rural Affairs, Sichuan Engineering and Technology Research Center of Coarse Cereal Industrialization, School of Food and Biological Engineering, Chengdu University, Chengdu, China
| | - Yunfeng Zhang
- Key Laboratory of Coarse Cereal Processing, Ministry of Agriculture and Rural Affairs, Sichuan Engineering and Technology Research Center of Coarse Cereal Industrialization, School of Food and Biological Engineering, Chengdu University, Chengdu, China
| | - Peng Wu
- Yunnan Plateau Characteristic Agricultural Industry Research Institute, Yunnan Agricultural University, Kunming, China
| | - Qiang Li
- Key Laboratory of Coarse Cereal Processing, Ministry of Agriculture and Rural Affairs, Sichuan Engineering and Technology Research Center of Coarse Cereal Industrialization, School of Food and Biological Engineering, Chengdu University, Chengdu, China
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Liu Z, Jiang C, Yin Z, Ibrahim IA, Zhang T, Wen J, Zhou L, Jiang G, Li L, Yang Z, Huang Y, Yang Z, Gu Y, Meng D, Yin H. Ecological features of microbial community linked to stochastic and deterministic assembly processes in acid mine drainage. Appl Environ Microbiol 2025; 91:e0102824. [PMID: 39679708 PMCID: PMC11784436 DOI: 10.1128/aem.01028-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2024] [Accepted: 10/09/2024] [Indexed: 12/17/2024] Open
Abstract
Ecological processes greatly shape microbial community assembly, but the driving factors remain unclear. Here, we compiled a metagenomic data set of microbial communities from global acid mine drainage (AMD) and explored the ecological features of microbial community linked to stochastic and deterministic processes from the perspective of species niche position, interaction patterns, gene functions, and viral infection. Our results showed that dispersal limitation (DL) (48.5%~93.5%) dominated the assembly of phylogenetic bin in AMD microbial community, followed by homogeneous selection (HoS) (3.1%~39.2%), heterogeneous selection (HeS) (1.4%~22.2%), and drift (DR) (0.2%~2.7%). The dominant process of dispersal limitation was significantly influenced by niche position in temperature (r = -0.518, P = 0.007) and dissolved oxygen (r = 0.471, P = 0.015). Network stability had a significantly negative correlation with the relative importance of dispersal limitation, while it had a positive correlation with selection processes, implying changes in network properties could be mediated by ecological processes. Furthermore, we found that ecological processes were mostly related to the gene functions of energy production and conversion (C), and amino acid transport and metabolism (E). Meanwhile, our results showed that the number of proviruses and viral genes involved in arsenic (As) resistance is negatively associated with the relative importance of ecological drift in phylogenetic bin assembly, implying viral infection might weaken ecological drift. Taken together, these results highlight that ecological processes are associated with ecological features at multiple levels, providing a novel insight into microbial community assembly in extremely acidic environments. IMPORTANCE Unraveling the forces driving community assemblage is a core issue in microbial ecology, but how ecological constraints impose stochasticity and determinism remains unknown. This study presents a comprehensive investigation to uncover the association of ecological processes with species niche position, interaction patterns, microbial metabolisms, and viral infections, which provides novel insights into community assembly in extreme environments.
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Affiliation(s)
- Zhenghua Liu
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
| | - Chengying Jiang
- State Key Laboratory of Microbial Resources, Institute of Microbiology Chinese Academy of Sciences, Beijing, China
| | - Zhuzhong Yin
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
| | | | - Teng Zhang
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
| | - Jing Wen
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
| | - Lei Zhou
- Hebei Key Laboratory of Highly Efficient Exploitation and Utilization of Radioactive Mineral Resources, Ganchan, China
| | - Guoping Jiang
- Hebei Key Laboratory of Highly Efficient Exploitation and Utilization of Radioactive Mineral Resources, Ganchan, China
| | - Liangzhi Li
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
| | - Zhendong Yang
- School of Architecture and Civil Engineering, Chengdu University, Chengdu, Sichuan, China
| | - Ye Huang
- State Key Laboratory of Microbial Resources, Institute of Microbiology Chinese Academy of Sciences, Beijing, China
| | - Zhaoyue Yang
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
| | - Yabing Gu
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
| | - Delong Meng
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
| | - Huaqun Yin
- School of Minerals Processing and Bioengineering, Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha, China
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Shi J, Qian W, Zhou Z, Jin Z. Response of bacterial communities in desert grassland soil profiles to acid mine drainage pollution. CHEMOSPHERE 2024; 369:143831. [PMID: 39608651 DOI: 10.1016/j.chemosphere.2024.143831] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Revised: 11/25/2024] [Accepted: 11/26/2024] [Indexed: 11/30/2024]
Abstract
Acid mine drainage (AMD) causes serious environmental pollution, which imposes stresses on soil ecosystems. Therefore, it is critical to study the responses of soil bacterial communities to AMD pollution in ecologically fragile desert grasslands. Here, the bacterial community composition, structure, and assembly processes in vertical soil profiles of an AMD contaminated desert grassland were explored using 16S rRNA high-throughput sequencing. The results showed that the surface layers of the profiles exhibited lower pH and higher heavy metals (HMs) content due to AMD influence. The AMD contamination led to reduced bacterial diversity in the surface soil layer of the profiles and significantly changed the bacterial community composition and structure. Gradients in pH, TK, TN, and HMs were the main factors driving bacterial community variability. In contrast to the uncontaminated profile, deterministic processes were important in shaping soil bacterial community in the AMD contaminated profiles. These findings will enhance understanding about the responses of soil bacteria in desert grassland soil to the environmental changes caused by AMD contamination and will improve the remediation of AMD contaminated soil.
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Affiliation(s)
- Jianfei Shi
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Science/National Desert-Oasis Ecology Construction Engineering Technology Research Center, Urumqi, 830011, China; University of Chinese Academy of Science, Beijing, 100049, China
| | - Wenting Qian
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Public Technology Service Center, Urumqi, 830011, China
| | - Zhibin Zhou
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Science/National Desert-Oasis Ecology Construction Engineering Technology Research Center, Urumqi, 830011, China; University of Chinese Academy of Science, Beijing, 100049, China
| | - Zhengzhong Jin
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Science/National Desert-Oasis Ecology Construction Engineering Technology Research Center, Urumqi, 830011, China; University of Chinese Academy of Science, Beijing, 100049, China; Taklimakan Desert Ecosystem Field Observation and Research Station of Xinjiang, Urumqi, 830011, China.
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Peng M, Deng G, Hu C, Hou X, Wang Z. Bioremediation Potential of Rhodococcus qingshengii PM1 in Sodium Selenite-Contaminated Soil and Its Impact on Microbial Community Assembly. Microorganisms 2024; 12:2458. [PMID: 39770660 PMCID: PMC11677749 DOI: 10.3390/microorganisms12122458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2024] [Revised: 11/26/2024] [Accepted: 11/27/2024] [Indexed: 01/11/2025] Open
Abstract
Soil microbial communities are particularly sensitive to selenium contamination, which has seriously affected the stability of soil ecological environment and function. In this study, we applied high-throughput 16S rRNA gene sequencing to examine the effects of low and high doses of sodium selenite and the selenite-degrading bacterium, Rhodococcus qingshengii PM1, on soil bacterial community composition, diversity, and assembly processes under controlled laboratory conditions. Our results indicated that sodium selenite and strain PM1 were key predictors of bacterial community structure in selenium-contaminated soils. Exposure to sodium selenite initially led to reductions in microbial diversity and a shift in dominant bacterial groups, particularly an increase in Actinobacteria and a decrease in Acidobacteria. Sodium selenite significantly reduced microbial diversity and simplified co-occurrence networks, whereas inoculation with strain PM1 partially reversed these effects by enhancing community complexity. Ecological modeling, including the normalized stochasticity ratio (NST) and Sloan's neutral community model (NCM), suggested that stochastic processes predominated in the assembly of bacterial communities under selenium stress. Null model analysis further revealed that heterogeneous selection and drift were primary drivers of community turnover, with PM1 inoculation promoting species dispersal and buffering against the negative impacts of selenium. These findings shed light on microbial community assembly mechanisms under selenium contamination and highlight the potential of strain PM1 for the bioremediation of selenium-affected soils.
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Affiliation(s)
- Mu Peng
- Hubei Key Laboratory of Biological Resources Protection and Utilization, Hubei Minzu University, Enshi 445000, China; (M.P.); (G.D.); (C.H.); (X.H.)
- College of Biological and Food Engineering, Hubei Minzu University, Enshi 445000, China
| | - Guangai Deng
- Hubei Key Laboratory of Biological Resources Protection and Utilization, Hubei Minzu University, Enshi 445000, China; (M.P.); (G.D.); (C.H.); (X.H.)
- College of Biological and Food Engineering, Hubei Minzu University, Enshi 445000, China
| | - Chongyang Hu
- Hubei Key Laboratory of Biological Resources Protection and Utilization, Hubei Minzu University, Enshi 445000, China; (M.P.); (G.D.); (C.H.); (X.H.)
| | - Xue Hou
- Hubei Key Laboratory of Biological Resources Protection and Utilization, Hubei Minzu University, Enshi 445000, China; (M.P.); (G.D.); (C.H.); (X.H.)
| | - Zhiyong Wang
- Hubei Key Laboratory of Biological Resources Protection and Utilization, Hubei Minzu University, Enshi 445000, China; (M.P.); (G.D.); (C.H.); (X.H.)
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Regar RK, Kamthan M, Gaur VK, Singh SP, Mishra S, Dwivedi S, Mishra A, Manickam N, Nautiyal CS. Microbiome divergence across four major Indian riverine water ecosystems impacted by anthropogenic contamination: A comparative metagenomic analysis. CHEMOSPHERE 2024; 368:143672. [PMID: 39500412 DOI: 10.1016/j.chemosphere.2024.143672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2024] [Revised: 10/30/2024] [Accepted: 11/01/2024] [Indexed: 11/14/2024]
Abstract
Rivers are critical ecosystems that support biodiversity and local livelihoods. This study aimed to evaluate the effects of metal contamination and anthropogenic activities on microbial and phage community dynamics within major Indian river ecosystems, focusing on the Ganga, Narmada, Cauvery, and Gomti rivers -using metagenomic techniques, Biolog, and ICP-MS analysis. Significant variations in microbial communities were observed both within each river and across the four systems, influenced by ecological factors like geography and hydrology, as well as anthropogenic pressures. Downstream sites consistently exhibited higher microbial diversity, with prevalence of Acidobacteria, Actinobacteria, Verrucomicrobia, Firmicutes, and Nitrospirae dominating, while Proteobacteria and Bacteroides declined. The Ganga River showed a higher abundance of bacteriophages compared to other rivers, which gradually reduced with the increment of anthropogenic impact. Functional gene analysis revealed correlations between carbon utilization and metal resistance in contaminated sites. ICP-MS analysis indicates elevated chromium and lead levels in downstream sites of all rivers compared to upstream sites. Interestingly, pristine upstream sites in the Ganga had higher trace element levels than those in Narmada and Cauvery, likely due to its Himalayan origin. Both the Ganga and Cauvery rivers contained numerous metal resistance genes. The Alaknanda was identified as the primary source of microbial communities, bacteriophages, trace elements, and heavy metals in the Ganga. These findings offer new insights into anthropogenic influences on river microbial dynamics and highlight the need for targeted monitoring and management strategies to preserve river health.
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Affiliation(s)
- Raj Kumar Regar
- Environmental Biotechnology Laboratory, CSIR-Indian Institute of Toxicology Research, Vishvigyan Bhavan, 31 Mahatma Gandhi Marg, Lucknow, Uttar Pradesh, 226001, India; Department of Biochemistry, School of Dental Sciences, Babu Banarsi Das University, Lucknow, Uttar Pradesh, 226028, India
| | - Mohan Kamthan
- Environmental Biotechnology Laboratory, CSIR-Indian Institute of Toxicology Research, Vishvigyan Bhavan, 31 Mahatma Gandhi Marg, Lucknow, Uttar Pradesh, 226001, India
| | - Vivek Kumar Gaur
- Environmental Biotechnology Laboratory, CSIR-Indian Institute of Toxicology Research, Vishvigyan Bhavan, 31 Mahatma Gandhi Marg, Lucknow, Uttar Pradesh, 226001, India
| | - Satyendra Pratap Singh
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, Uttar Pradesh 226001, India
| | - Seema Mishra
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, Uttar Pradesh 226001, India
| | - Sanjay Dwivedi
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, Uttar Pradesh 226001, India
| | - Aradhana Mishra
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, Uttar Pradesh 226001, India
| | - Natesan Manickam
- Environmental Biotechnology Laboratory, CSIR-Indian Institute of Toxicology Research, Vishvigyan Bhavan, 31 Mahatma Gandhi Marg, Lucknow, Uttar Pradesh, 226001, India.
| | - Chandra Shekhar Nautiyal
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, Uttar Pradesh 226001, India.
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10
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Deng Y, Xiao W, Xiong Z, Sha A, Luo Y, Chen X, Li Q. Assembly Mechanism of Rhizosphere Fungi in Plant Restoration in Lead Zinc Mining Areas. Genes (Basel) 2024; 15:1398. [PMID: 39596598 PMCID: PMC11593579 DOI: 10.3390/genes15111398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2024] [Revised: 10/27/2024] [Accepted: 10/29/2024] [Indexed: 11/28/2024] Open
Abstract
BACKGROUND So far, the assembly and response mechanism of soil fungi in the ecological restoration process of lead zinc mines is still unclear. METHODS In this study, we selected three plants for the ecological restoration of abandoned lead zinc mining areas and explored the community assembly mechanism by which soil fungi assist plants in adapting to the environment during the ecological restoration process. RESULTS The results revealed that the mining of lead zinc mines led to a significant decrease in soil fungal diversity, whereas the planting of three plants significantly increased the diversity of rhizosphere fungi. Mining activities significantly reduced the abundance of soil Fusarium, Macroventuria, Cladosporium, and Solicocozyma and increased the abundance of soil Helvella. After three ecologically restored plants were planted, the abundances of Fusarium and Cladosporium increased significantly, whereas the abundance of Helvella decreased significantly. In addition, Capronia was significantly enriched in the rhizosphere soils of three plant species in the mining area. β diversity and fungal guild analysis revealed that mining activities had a great impact on fungal communities and guilds. The ecological restoration of plants changed the guilds of rhizosphere fungi, making them closer to those of the control sample. In addition, the endophyte guild was significantly enriched in the rhizosphere soil of three ecologically restored plants, increasing their adaptability. CONCLUSIONS The results provide a reference for screening lead zinc mine bioremediation strains and developing fungal plant joint remediation strategies.
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Affiliation(s)
- Yue Deng
- School of China Alcoholic Drinks, Luzhou Vocational and Technology College, Luzhou 646000, China;
| | - Wenqi Xiao
- School of Food and Biological Engineering, Chengdu University, Chengdu 610106, China; (W.X.); (Z.X.); (A.S.); (Y.L.); (X.C.)
| | - Zhuang Xiong
- School of Food and Biological Engineering, Chengdu University, Chengdu 610106, China; (W.X.); (Z.X.); (A.S.); (Y.L.); (X.C.)
| | - Ajia Sha
- School of Food and Biological Engineering, Chengdu University, Chengdu 610106, China; (W.X.); (Z.X.); (A.S.); (Y.L.); (X.C.)
| | - Yingyong Luo
- School of Food and Biological Engineering, Chengdu University, Chengdu 610106, China; (W.X.); (Z.X.); (A.S.); (Y.L.); (X.C.)
| | - Xiaodie Chen
- School of Food and Biological Engineering, Chengdu University, Chengdu 610106, China; (W.X.); (Z.X.); (A.S.); (Y.L.); (X.C.)
| | - Qiang Li
- School of Food and Biological Engineering, Chengdu University, Chengdu 610106, China; (W.X.); (Z.X.); (A.S.); (Y.L.); (X.C.)
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11
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Wu C, Huang F, Wei L, Yi S, Wu Y, Huang Z, Yi M, Li F. Do the residual metals in multiple environmental media surrounding mines pose ecological and health risks? A case of an abandoned mining area in central south China. ENVIRONMENTAL RESEARCH 2024; 257:119279. [PMID: 38821461 DOI: 10.1016/j.envres.2024.119279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Revised: 05/27/2024] [Accepted: 05/29/2024] [Indexed: 06/02/2024]
Abstract
Despite effective mining environmental regulations, residual metal pollution persists, leading to significant ecological harm and posing substantial risks to human well-being. This study employed multiple-criteria methods to investigate the ecological and health risks caused by metals in multiple environmental media (e.g., arable soil, indoor dust, PM10, homegrown vegetables, and rice) around abandoned mine areas (MA) in central south China. The study also aimed to identify predominant risk factors and the main exposure pathway. The findings revealed that metal levels and risks in the environmental media surrounding the MA were significantly higher than those in the control areas (away from abandoned mines, CA). This indicates that the accumulation of metals in the environmental media surrounding the MA was attributed to the previous mining activities. Variations in metal content were observed among different environmental media in MA, with Cd from mining source being the primary pollutant in arable soil, indoor dust, PM10, and vegetables, while As from agricultural source was the main pollutant in rice. Additionally, the consumption of Cd-contaminated vegetables and As-contaminated rice emerged as the primary routes of health hazards for the local population, leading to significant non-carcinogenic and carcinogenic risks. Consequently, it is imperative for the government and mining companies to promptly establish risk control and remedial strategies for mitigating residual metal levels in multiple environmental media surrounding the MA.
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Affiliation(s)
- Chen Wu
- College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China; Hunan Provincial University Key Laboratory for Environmental and Ecological Health, Xiangtan, 411105, China; The Experimental Teaching Center in College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China
| | - Fenglian Huang
- State Environmental Protection Key Laboratory of Monitoring for Heavy Metal Pollutants, Changsha, 410014, China; Changsha Environmental Protection Vocational College, Changsha, 410004, China
| | - Lanlan Wei
- College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China; Hunan Provincial University Key Laboratory for Environmental and Ecological Health, Xiangtan, 411105, China; The Experimental Teaching Center in College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China
| | - Shengwei Yi
- College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China; Hunan Provincial University Key Laboratory for Environmental and Ecological Health, Xiangtan, 411105, China; The Experimental Teaching Center in College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China
| | - Yujun Wu
- College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China; Hunan Provincial University Key Laboratory for Environmental and Ecological Health, Xiangtan, 411105, China; The Experimental Teaching Center in College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China
| | - Zhongting Huang
- Changsha Environmental Protection Vocational College, Changsha, 410004, China
| | - Min Yi
- Hunan Ecological and Environmental Monitoring Center, Changsha, 410014, China
| | - Feng Li
- College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China; Hunan Provincial University Key Laboratory for Environmental and Ecological Health, Xiangtan, 411105, China; The Experimental Teaching Center in College of Environment and Resources, Xiangtan University, Xiangtan, 411105, China.
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12
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Zhu A, Liang Z, Gao L, Xie Z. Dispersal limitation determines the ecological processes that regulate the seasonal assembly of bacterial communities in a subtropical river. Front Microbiol 2024; 15:1430073. [PMID: 39252829 PMCID: PMC11381306 DOI: 10.3389/fmicb.2024.1430073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Accepted: 08/13/2024] [Indexed: 09/11/2024] Open
Abstract
Bacteria play a crucial role in pollutant degradation, biogeochemical cycling, and energy flow within river ecosystems. However, the underlying mechanisms governing bacterial community assembly and their response to environmental factors at seasonal scales in subtropical rivers remain poorly understood. In this study, we conducted 16S rRNA gene amplicon sequencing on water samples from the Liuxi River to investigate the composition, assembly processes, and co-occurrence relationships of bacterial communities during the wet season and dry season. The results demonstrated that seasonal differences in hydrochemistry significantly influenced the composition of bacterial communities. A more heterogeneous community structure and increased alpha diversity were observed during the dry season. Water temperature emerged as the primary driver for seasonal changes in bacterial communities. Dispersal limitation predominantly governed community assembly, however, during the dry season, its contribution increased due to decreased immigration rates. Co-occurrence network analysis reveals that mutualism played a prevailing role in shaping bacterial community structure. Compared to the wet season, the network of bacterial communities exhibited higher modularity, competition, and keystone species during the dry season, resulting in a more stable community structure. Although keystone species displayed distinct seasonal variations, Proteobacteria and Actinobacteria were consistently abundant keystone species maintaining network structure in both seasons. Our findings provide insights into how bacterial communities respond to seasonal environmental changes, uncovering underlying mechanisms governing community assembly in subtropical rivers, which are crucial for the effective management and conservation of riverine ecosystems.
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Affiliation(s)
- Aiping Zhu
- School of Geography and Tourism, Anhui Normal University, Wuhu, China
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Chinese Academy of Sciences, Guangzhou, China
| | - Zuobing Liang
- Lushan Botanical Garden, Chinese Academy of Sciences, Jiujiang, China
| | - Lei Gao
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Chinese Academy of Sciences, Guangzhou, China
| | - Zhenglan Xie
- School of Geomatics and Municipal Engineering, Zhejiang University of Water Resources and Electric Power, Hangzhou, China
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13
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Bensalah J, Thakur A, Kumar A. Investigating the adsorption processes of polymer resins for the removal of micropollutants: A comprehensive review in the field of environmental remediation. ENVIRONMENTAL RESEARCH 2024; 254:119128. [PMID: 38740294 DOI: 10.1016/j.envres.2024.119128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Revised: 05/09/2024] [Accepted: 05/09/2024] [Indexed: 05/16/2024]
Abstract
The growing worry for human health stems from the fact that micropollutants (MPs), particularly dyes, are more common in aquatic settings. These particles pose a serious risk to both humans and animals since they have been found in a variety of bodily fluids and waste products from both humans and animals. MPs pose significant dangers to human health and other living things due to their extended half-lives, high fragmentation propensity, and capacity to absorb organic pollutants as well (MB, MR, MO and CV dyes) and heavy metals as well (Pb(II), Cd(II) Co(II) Cr(III) and Ag(I) ….). They also contribute to the degradation of terrestrial and aquatic habitats. Sustainable and effective methods for removing MPs from wastewater and treating organic micropollutants in an environmentally friendly manner are being developed in order to address this problem. This work offers a thorough review of adsorption technology as a productive and environmentally friendly means of eliminating MPs from aqueous environments, with an emphasis on developments in the application of polymeric resin in MP removal. The review examines the adsorption process and the variables that affect adsorption efficiency, including the characteristics of the micropollutant, the resin, and the solution. To improve understanding, a number of adsorption mechanisms and models are explored. The study also addresses the difficulties and future possibilities of adsorption technology, emphasising the need to optimize resin characteristics, create sustainable and affordable regeneration techniques, and take into account the environmental effects of adsorbent materials.
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Affiliation(s)
- Jaouad Bensalah
- Laboratory of Advanced Materials and Process Engineering (LAMPE), Department of Chemistry, Faculty of Sciences, Ibn Tofaïl University, B.P. 133, 14000, Kenitra, Morocco.
| | - Abhinay Thakur
- Department of Chemistry, School of Chemical Engineering and Physical Sciences, Lovely Professional University, Phagwara, Punjab, India
| | - Ashish Kumar
- Nalanda College of Engineering, Bihar Engineering University, Department of Science, Technology and Technical Education, Government of Bihar, 803108, India.
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14
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Zhao D, Bol R, Wang J, Jin J, Wang Y, Wang T, Zhu H, Wu Y, Fang L, Bing H. Soil heavy metal pollution promotes extracellular enzyme production by mediating microbial community structure during vegetation restoration of metallic tailing reservoir. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 948:174783. [PMID: 39009168 DOI: 10.1016/j.scitotenv.2024.174783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2024] [Revised: 06/25/2024] [Accepted: 07/12/2024] [Indexed: 07/17/2024]
Abstract
Vegetation restoration in metallic tailing reservoirs is imperative to restore the post-mining degraded ecosystems. Extracellular enzymes determine microbial resource acquisition in soils, yet the mechanisms controlling the enzyme activity and stoichiometry during vegetation restoration in metallic tailing reservoirs remain elusive. Here, we investigated the variations and drivers of C-, N- and P-acquiring enzymes together with microbial community along a 50-year vegetation restoration chronosequence in the China's largest vanadium titano-magnetite tailing reservoir. We found a parabolic pattern in the enzyme activity and efficiency along the chronosequence, peaking at the middle restoration stage (∼30 years) with approximately six-fold increase relative to the initial 1-year site. The enzyme ratios of C:P and N:P decreased by 33 % and 68 % along the chronosequence, respectively, indicating a higher microbial demand of C and N at the early stage and a higher demand of P at the later stage. Soil nutrients directly determined the enzyme activities and stoichiometry, whereas microbial biomass and community structure regulated the temporal pattern of the enzyme efficiency. Surprisingly, increased heavy metal pollution imposed a positive effect on the enzyme efficiency indirectly by altering microbial community structure. This was evidenced by the increased microbial diversity and the conversion of copiotrophic to oligotrophic and stress-tolerant taxa along the chronosequence. Our findings provide new insights into microbial functioning in soil nutrient dynamics during vegetation restoration under increasing heavy metal pollution.
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Affiliation(s)
- Dongyan Zhao
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, 610299 Chengdu, China; College of Ecology and Environment, Chengdu University of Technology, 610059 Chengdu, China
| | - Roland Bol
- Institute of Bio- and Geosciences, Agrosphere (IBG-3), Forschungszentrum Jülich GmbH, Wilhelm-Johnen-Straße, 52428 Jülich, Germany
| | - Jipeng Wang
- College of Ecology and Environment, Chengdu University of Technology, 610059 Chengdu, China; Chengdu Institute of Biology, Chinese Academy of Sciences, 610041 Chengdu, China
| | - Jiyuan Jin
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, 610299 Chengdu, China
| | - Yuhan Wang
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, 610299 Chengdu, China; Hubei Key Laboratory of Mineral Resources Processing and Environment, Wuhan University of Technology, 430070 Wuhan, China
| | - Tianxin Wang
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, 610299 Chengdu, China
| | - He Zhu
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, 610299 Chengdu, China
| | - Yanhong Wu
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, 610299 Chengdu, China
| | - Linchuan Fang
- Hubei Key Laboratory of Mineral Resources Processing and Environment, Wuhan University of Technology, 430070 Wuhan, China
| | - Haijian Bing
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, 610299 Chengdu, China.
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15
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Ahmed T, Shou L, Guo J, Noman M, Qi Y, Yao Y, Masood HA, Rizwan M, Ali MA, Ali HM, Li B, Qi X. Modulation of rhizosphere microbial community and metabolites by bio-functionalized nanoscale silicon oxide alleviates cadmium-induced phytotoxicity in bayberry plants. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 933:173068. [PMID: 38723965 DOI: 10.1016/j.scitotenv.2024.173068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2024] [Revised: 05/02/2024] [Accepted: 05/06/2024] [Indexed: 05/16/2024]
Abstract
Cadmium (Cd) is an extremely toxic heavy metal that can originate from industrial activities and accumulate in agricultural soils. This study investigates the potential of biologically synthesized silicon oxide nanoparticles (Bio-SiNPs) in alleviating Cd toxicity in bayberry plants. Bio-SiNPs were synthesized using the bacterial strain Chryseobacterium sp. RTN3 and thoroughly characterized using advanced techniques. A pot experiment results demonstrated that Cd stress substantially reduced leaves biomass, photosynthesis efficiency, antioxidant enzyme activity, and induced oxidative damage in bayberry (Myrica rubra) plants. However, Bio-SiNPs application at 200 mg kg-1 significantly enhanced plant biomass, chlorophyll content (26.4 %), net photosynthetic rate (8.6 %), antioxidant enzyme levels, and mitigated reactive oxygen species production under Cd stress. Bio-SiNPs modulated key stress-related phytohormones by increasing salicylic acid (13.2 %) and abscisic acid (13.7 %) contents in plants. Bio-SiNPs augmented Si deposition on root surfaces, preserving normal ultrastructure in leaf cells. Additionally, 16S rRNA gene sequencing demonstrated that Bio-SiNPs treatment favorably reshaped structure and abundance of specific bacterial groups (Proteobacteria, Actinobacteriota, and Acidobacteriota) in the rhizosphere. Notably, Bio-SiNPs application significantly modulated the key metabolites (phenylacetaldehyde, glycitein, maslinic acid and methylmalonic acid) under both normal and Cd stress conditions. Overall, this study highlights that bio-nanoremediation using Bio-SiNPs enhances tolerance to Cd stress in bayberry plants by beneficially modulating biochemical, microbial, and metabolic attributes.
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Affiliation(s)
- Temoor Ahmed
- Xianghu Laboratory, Hangzhou 311231, China; State Key Laboratory of Rice Biology and Breeding, Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Linfei Shou
- Station for the Plant Protection & Quarantine and Control of Agrochemicals Zhejiang Province, Hangzhou 310004, China
| | - Junning Guo
- State Key Laboratory of Rice Biology and Breeding, Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Muhammad Noman
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China
| | - Yetong Qi
- Xianghu Laboratory, Hangzhou 311231, China
| | - Yanlai Yao
- Xianghu Laboratory, Hangzhou 311231, China; Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China
| | - Hafiza Ayesha Masood
- Department of Plant Breeding and Genetics, University of Agriculture, 38000 Faisalabad, Pakistan; MEU Research Unit, Middle East University, Amman, Jordan
| | - Muhammad Rizwan
- Department of Environmental Sciences, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | - Md Arshad Ali
- Biotechnology Programme, Faculty of Science and Natural Resources, Universiti Malaysia Sabah, Jalan UMS, Kota Kinabalu 88400, Sabah, Malaysia
| | - Hayssam M Ali
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Bin Li
- State Key Laboratory of Rice Biology and Breeding, Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China.
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16
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Sun T, Li G, Mazarji M, Delaplace P, Yang X, Zhang J, Pan J. Heavy metals drive microbial community assembly process in farmland with long-term biosolids application. JOURNAL OF HAZARDOUS MATERIALS 2024; 468:133845. [PMID: 38401217 DOI: 10.1016/j.jhazmat.2024.133845] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2023] [Revised: 01/27/2024] [Accepted: 02/18/2024] [Indexed: 02/26/2024]
Abstract
Biosolids are considered an alternative to chemical fertilizers due to their rich nutrients. However, long-term biosolids application can lead to heavy metals accumulation, which severely affects soil microbial community compositions. The factors influencing soil microbial community assembly were explored under a 16-year long-term experiment with biosolids applications. Our results indicated that biosolids application significantly increased fungal richness while not for bacterial and arbuscular mycorrhizal (AM) fungal richness. Besides, biosolids application significantly affected soil bacterial, fungal compositions and AM fungal community. Soil microorganisms were clustered into different modules with bacterial and AM fungal communities were affected by both organic matter and heavy metals, while fungal communities were affected by heavy metals (Cr, Ni, and As). The soil bacterial community assembly was dominated by stochastic processes while the fungal and AM fungal community assemblies were mainly driven by deterministic processes. Random forest analysis showed that heavy metals were identified as major drivers (Hg, Cu, Cd, and Zn for bacteria, Pb and Cr for fungi, and As and Ni for AM fungi) of the community assembly process. Overall, our study highlights the significant role of heavy metals in shaping microbial community dynamics and gives a guide for controlling biosolids application.
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Affiliation(s)
- Tao Sun
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China; Gembloux Agro Bio Tech, University of Liège, 5030, Belgium
| | - Guihua Li
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Mahmoud Mazarji
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | | | - Xing Yang
- Key Laboratory of Agro-Forestry Environmental Processes and Ecological Regulation of Hainan Province, School of Ecology and Environment, Hainan University, Renmin Avenue, Haikou 570228, China
| | - Jianfeng Zhang
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
| | - Junting Pan
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
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17
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Singh JP, Bottos EM, Van Hamme JD, Fraser LH. Microbial composition and function in reclaimed mine sites along a reclamation chronosequence become increasingly similar to undisturbed reference sites. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 920:170996. [PMID: 38369136 DOI: 10.1016/j.scitotenv.2024.170996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Revised: 02/13/2024] [Accepted: 02/13/2024] [Indexed: 02/20/2024]
Abstract
Mine reclamation historically focuses on enhancing plant coverage to improve below and aboveground ecology. However, there is a great need to study the role of soil microorganisms in mine reclamation, particularly long-term studies that track the succession of microbial communities. Here, we investigate the trajectory of microbial communities of mining sites reclaimed between three and 26 years. We used high-throughput amplicon sequencing to characterize the bacterial and fungal communities. We quantified how similar the reclaimed sites were to unmined, undisturbed reference sites and explored the trajectory of microbial communities along the reclamation chronosequence. We also examined the ecological processes that shape the assembly of bacterial communities. Finally, we investigated the functional potential of the microbial communities through metagenomic sequencing. Our results reveal that the reclamation age significantly impacted the community compositions of bacterial and fungal communities. As the reclamation age increases, bacterial and fungal communities become similar to the unmined, undisturbed reference site, suggesting a favorable succession in microbial communities. The bacterial community assembly was also significantly impacted by reclamation age and was primarily driven by stochastic processes, indicating a lesser influence of environmental properties on the bacterial community. Furthermore, our read-based metagenomic analysis showed that the microbial communities' functional potential increasingly became similar to the reference sites. Additionally, we found that the plant richness increased with the reclamation age. Overall, our study shows that both above- and belowground ecological properties of reclaimed mine sites trend towards undisturbed sites with increasing reclamation age. Further, it demonstrates the importance of microbial genomics in tracking the trajectory of ecosystem reclamation.
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Affiliation(s)
- Jay Prakash Singh
- Department of Natural Resource Sciences, Thompson Rivers University, 805 TRU Way, Kamloops, BC V2C 0C8, Canada.
| | - Eric M Bottos
- Department of Biological Sciences, Thompson Rivers University, 805 TRU Way, Kamloops, BC V2C 0C8, Canada
| | - Jonathan D Van Hamme
- Department of Biological Sciences, Thompson Rivers University, 805 TRU Way, Kamloops, BC V2C 0C8, Canada
| | - Lauchlan H Fraser
- Department of Natural Resource Sciences, Thompson Rivers University, 805 TRU Way, Kamloops, BC V2C 0C8, Canada
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18
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Jing Z, Tu S, Yuan P, Liu X, Wang S, Dong B, Li Q, Gao H. The ecological role of microbiome at community-, taxonomic - and genome-levels in black-odorous waters. JOURNAL OF HAZARDOUS MATERIALS 2024; 467:133673. [PMID: 38340561 DOI: 10.1016/j.jhazmat.2024.133673] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Revised: 12/17/2023] [Accepted: 01/29/2024] [Indexed: 02/12/2024]
Abstract
Black-odorous waters (BOWs) are heavily polluted waters where microbial information remains elusive mechanistically. Based on gene amplicon and metagenomics sequencing, a comprehensive study was conducted to investigate the microbial communities in urban and rural BOWs. The results revealed that microbial communities' assembly in urban and rural BOWs was predominantly governed by stochastic factors at the community level. At the taxonomic level, there were 62 core species (58.48%) in water and 207 core species (44.56%) in sediment across urban and rural areas. Notably, significant differences were observed in the functional genetic composition of BOWs between urban and rural areas. Specifically, rural areas exhibited an enhanced abundance of genes involved in nitrogen fixation, Fe2+ transport, and sulfate reduction. Conversely, urban areas showed higher abundances of some genes associated with carbon fixation, nitrification and denitrification. A sulfur-centered ecological model of microbial communities was constructed by integrating data from the three levels of analysis, and 14 near-complete draft genomes were generated, representing a substantial portion of the microbial community (35.04% in rural BOWs and 29.97% in urban BOWs). This research provides significant insights into the sustainable management and preservation of aquatic ecosystems affected by BOWs.
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Affiliation(s)
- Zhangmu Jing
- State Key Laboratory of Pollution Control and Resource Reuse, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, PR China; State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China; State Environmental Protection Key Laboratory of Estuarine and Coastal Environment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China
| | - Shengqiang Tu
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China; State Environmental Protection Key Laboratory of Estuarine and Coastal Environment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China
| | - Peng Yuan
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China; State Environmental Protection Key Laboratory of Estuarine and Coastal Environment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China
| | - Xiaoling Liu
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China; State Environmental Protection Key Laboratory of Estuarine and Coastal Environment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China
| | - Siyu Wang
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China; State Environmental Protection Key Laboratory of Estuarine and Coastal Environment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China
| | - Bin Dong
- State Key Laboratory of Pollution Control and Resource Reuse, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, PR China
| | - Qingqian Li
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China; State Environmental Protection Key Laboratory of Estuarine and Coastal Environment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China
| | - Hongjie Gao
- State Key Laboratory of Pollution Control and Resource Reuse, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, PR China; State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China; State Environmental Protection Key Laboratory of Estuarine and Coastal Environment, Chinese Research Academy of Environmental Science, Beijing 100012, PR China.
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Zhang H, Nie M, Du X, Chen S, Liu H, Wu C, Tang Y, Lei Z, Shi G, Zhao X. Selenium and Bacillus proteolyticus SES increased Cu-Cd-Cr uptake by ryegrass: highlighting the significance of key taxa and soil enzyme activity. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:29113-29131. [PMID: 38568308 DOI: 10.1007/s11356-024-32959-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 03/13/2024] [Indexed: 04/24/2024]
Abstract
Many studies have focused their attention on strategies to improve soil phytoremediation efficiency. In this study, a pot experiment was carried out to investigate whether Se and Bacillus proteolyticus SES promote Cu-Cd-Cr uptake by ryegrass. To explore the effect mechanism of Se and Bacillus proteolyticus SES, rhizosphere soil physiochemical properties and rhizosphere soil bacterial properties were determined further. The findings showed that Se and Bacillus proteolyticus SES reduced 23.04% Cu, 36.85% Cd, and 9.85% Cr from the rhizosphere soil of ryegrass. Further analysis revealed that soil pH, organic matter, soil enzyme activities, and soil microbial properties were changed with Se and Bacillus proteolyticus SES application. Notably, rhizosphere key taxa (Bacteroidetes, Actinobacteria, Firmicutes, Patescibacteria, Verrucomicrobia, Chloroflexi, etc.) were significantly enriched in rhizosphere soil of ryegrass, and those taxa abundance were positively correlated with soil heavy metal contents (P < 0.01). Our study also demonstrated that in terms of explaining variations of soil Cu-Cd-Cr content under Se and Bacillus proteolyticus SES treatment, soil enzyme activities (catalase and acid phosphatase) and soil microbe properties showed 42.5% and 12.2% contributions value, respectively. Overall, our study provided solid evidence again that Se and Bacillus proteolyticus SES facilitated phytoextraction of soil Cu-Cd-Cr, and elucidated the effect of soil key microorganism and chemical factor.
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Affiliation(s)
- Huan Zhang
- College of Resources and Environment, Huazhong Agricultural University / Research Center of Trace Elements, Wuhan, 430070, China
- Key Laboratory of Se-Enriched Products Development and Quality Control, Ministry of Agriculture and Rural Affairs/ National-Local Joint Engineering Laboratory of Se-Enriched Food Development, Ankang, 725000, China
| | - Min Nie
- College of Resources and Environment, Huazhong Agricultural University / Research Center of Trace Elements, Wuhan, 430070, China
| | - Xiaoping Du
- Key Laboratory of Se-Enriched Products Development and Quality Control, Ministry of Agriculture and Rural Affairs/ National-Local Joint Engineering Laboratory of Se-Enriched Food Development, Ankang, 725000, China
| | - Suhua Chen
- National-Local Joint Engineering Research Center of Heavy Metals Pollutants Control and Resource Utilization (Nanchang Hangkong University), Nanchang, 330063, China
| | - Hanliang Liu
- Key Laboratory of Geochemical Exploration, Institute of Geophysical and Geochemical Exploration, CAGS, Langfang, 065000, Hebei, China
| | - Chihhung Wu
- Fujian Provincial Key Laboratory of Resources and Environment Monitoring & Sustainable Management and Utilization, Sanming University, Sanming, 365004, China
| | - Yanni Tang
- College of Resources and Environment, Huazhong Agricultural University / Research Center of Trace Elements, Wuhan, 430070, China
| | - Zheng Lei
- College of Resources and Environment, Huazhong Agricultural University / Research Center of Trace Elements, Wuhan, 430070, China
| | - Guangyu Shi
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China
| | - Xiaohu Zhao
- College of Resources and Environment, Huazhong Agricultural University / Research Center of Trace Elements, Wuhan, 430070, China.
- Key Laboratory of Se-Enriched Products Development and Quality Control, Ministry of Agriculture and Rural Affairs/ National-Local Joint Engineering Laboratory of Se-Enriched Food Development, Ankang, 725000, China.
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20
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Firincă C, Zamfir LG, Constantin M, Răut I, Capră L, Popa D, Jinga ML, Baroi AM, Fierăscu RC, Corneli NO, Postolache C, Doni M, Gurban AM, Jecu L, Șesan TE. Microbial Removal of Heavy Metals from Contaminated Environments Using Metal-Resistant Indigenous Strains. J Xenobiot 2023; 14:51-78. [PMID: 38249101 PMCID: PMC10801475 DOI: 10.3390/jox14010004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 12/19/2023] [Accepted: 12/27/2023] [Indexed: 01/23/2024] Open
Abstract
Contamination of soil with heavy metals has become a matter of global importance due to its impact on agriculture, environmental integrity, and therefore human health and safety. Several microbial strains isolated from soil contaminated by long-term chemical and petrochemical activities were found to manifest various levels of tolerance to Cr, Pb, and Zn, out of which Bacillus marisflavi and Trichoderma longibrachiatum exhibited above-moderate tolerance. The concentrations of target heavy metals before and after bioremediation were determined using electrochemical screen-printed electrodes (SPE) modified with different nanomaterials. The morpho-structural SEM/EDX analyses confirmed the presence of metal ions on the surface of the cell, with metal uptake being mediated by biosorption with hydroxyl, carboxyl, and amino groups as per FTIR observations. T. longibrachiatum was observed to pose a higher bioremediation potential compared to B. marisflavi, removing 87% of Cr and 67% of Zn, respectively. Conversely, B. marisflavi removed 86% of Pb from the solution, compared to 48% by T. longibrachiatum. Therefore, the fungal strain T. longibrachiatum could represent a viable option for Cr and Zn bioremediation strategies, whereas the bacterial strain B. marisflavi may be used in Pb bioremediation applications.
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Affiliation(s)
- Cristina Firincă
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
- Department of Botany and Microbiology, Faculty of Biology, University of Bucharest, 91–95 Spl. Independenței, 050095 Bucharest, Romania
| | - Lucian-Gabriel Zamfir
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Mariana Constantin
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
- Department of Pharmacy, Faculty of Pharmacy, University Titu Maiorescu of Bucharest, 040441 Bucharest, Romania
| | - Iuliana Răut
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Luiza Capră
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Diana Popa
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Maria-Lorena Jinga
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Anda Maria Baroi
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Radu Claudiu Fierăscu
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Nicoleta Olguța Corneli
- National Institute of Research and Development for Microbiology and Immunology—Cantacuzino, 103 Spl. Independenței, 050096 Bucharest, Romania
| | - Carmen Postolache
- Department of Botany and Microbiology, Faculty of Biology, University of Bucharest, 91–95 Spl. Independenței, 050095 Bucharest, Romania
| | - Mihaela Doni
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Ana-Maria Gurban
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Luiza Jecu
- Biotechnology and Bioanalysis Departments, National Institute of Research and Development in Chemistry and Petrochemistry—ICECHIM, 202 Spl. Independenței, 060021 Bucharest, Romania; (C.F.); (M.D.)
| | - Tatiana Eugenia Șesan
- Department of Botany and Microbiology, Faculty of Biology, University of Bucharest, 91–95 Spl. Independenței, 050095 Bucharest, Romania
- Field Crop Section, Academy of Agricultural and Forestry Sciences, Bd Mărăști 61, 011464 Bucharest, Romania
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Wang W, Lei J, Li M, Zhang X, Xiang X, Wang H, Lu X, Ma L, Liu X, Tuovinen OH. Archaea are better adapted to antimony stress than their bacterial counterparts in Xikuangshan groundwater. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 905:166999. [PMID: 37714340 DOI: 10.1016/j.scitotenv.2023.166999] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 09/08/2023] [Accepted: 09/09/2023] [Indexed: 09/17/2023]
Abstract
Archaea are important ecological components of microbial communities in various environments, but are currently poorly investigated in antimony (Sb) contaminated groundwater particularly on their ecological differences in comparison with bacteria. To address this issue, groundwater samples were collected from Xikuangshan aquifer along an Sb gradient and subjected to 16S rRNA gene amplicon sequencing and bioinformatic analysis. The results demonstrated that bacterial communities were more susceptibly affected by elevated Sb concentration than their archaeal counterparts, and the positive stimulation of Sb concentration on bacterial diversity coincided with the intermediate disturbance hypothesis. Overall, the balance of environmental variables (Sb, pH, and EC), competitive interactions, and stochastic events jointly regulated bacterial and archaeal communities. Linear fitting analysis revealed that Sb significantly drove the deterministic process (heterogeneous selection) of bacterial communities, whereas stochastic process (dispersal limitation) contributed more to archaeal community assembly. In contract, the assembly of Sb-resistant bacteria and archaea was dominated by the stochastic process (undominated), which implied the important role of diversification and drift instead of selection. Compared with Sb-resistant microorganisms, bacterial and archaeal communities showed lower niche width, which may result from the constraints of Sb concentration and competitive interaction. Moreover, Sb-resistant archaea had a higher niche than that of Sb-resistant bacteria via investing on flexible metabolic pathways such as organic metabolism, ammonia oxidation; and carbon fixation to enhance their competitiveness. Our results offered new insights into the ecological adaptation mechanisms of bacteria and archaea in Sb-contaminated groundwater.
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Affiliation(s)
- Weiqi Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan 430074, China
| | - Jingwen Lei
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan 430074, China
| | - Min Li
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan 430074, China
| | - Xinyue Zhang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan 430074, China
| | - Xing Xiang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, China; College of Life Science, Shangrao Normal University, Shangrao 334000, China
| | - Hongmei Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan 430074, China.
| | - Xiaolu Lu
- School of Environmental Studies, China University of Geosciences, Wuhan 430074, China
| | - Liyuan Ma
- School of Environmental Studies, China University of Geosciences, Wuhan 430074, China
| | - Xiaoyan Liu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan 430074, China
| | - Olli H Tuovinen
- Department of Microbiology, Ohio State University, Columbus 43210, USA
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22
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Golik VI, Klyuev RV, Martyushev NV, Kondratiev VV, Tynchenko VS, Gladkikh VA, Iushkova LV, Brigida V. Reuse and Mechanochemical Processing of Ore Dressing Tailings Used for Extracting Pb and Zn. MATERIALS (BASEL, SWITZERLAND) 2023; 16:7004. [PMID: 37959601 PMCID: PMC10647765 DOI: 10.3390/ma16217004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2023] [Revised: 10/09/2023] [Accepted: 10/30/2023] [Indexed: 11/15/2023]
Abstract
The increasing accumulation of rock waste obtained due to ore processing and its environmental impacts, such as acid mine drainage and elevated concentrations of heavy metals in soils, necessitates the transformation of mining technologies based on the concept of circular waste management. The research is aimed at improving the parameters of the mechanical activation effect produced on technogenic georesources, as well as at expanding the application scope of disintegrators in the field of using the partial backfill of the mined-out space when developing stratified deposits. In this regard, the research purpose was to substantiate the parameters of extracting metals from enrichment tailings using their mechanochemical activation to ensure cyclic waste management. The research involved the application of three-dimensional interpolation methods used for processing the data and the graphical representation. As a result, the following was found to be characteristic of the waste of the Sadonsky mine management. The degree of extracting zinc from pre-activated tailings increases logarithmically when the H2SO4 concentration and the NaCl proportion decrease 3.5 times. The degree of extracting lead from the activated tailings increases according to the Fourier law when decreasing the NaCl mass concentration, and an optimal range of the H2SO4 (0.38-0.51%) proportion decreases six times. One of the key results of the research is the justification of expanding the scope of applying disintegrators in the case of a directed activation influence exerted on the components of the stowing strips. The obtained results expand the understanding of the mechanism of the influence of the mechanochemical activation of dry tailings on the reactivity unevenness when extracting several metals from them.
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Affiliation(s)
- Vladimir I. Golik
- Department “Technique and Technology of Mining and Oil and Gas Production”, Moscow Polytechnic University, 33 B. Semenovskaya St., 107023 Moscow, Russia; (V.I.G.); (R.V.K.)
| | - Roman V. Klyuev
- Department “Technique and Technology of Mining and Oil and Gas Production”, Moscow Polytechnic University, 33 B. Semenovskaya St., 107023 Moscow, Russia; (V.I.G.); (R.V.K.)
| | - Nikita V. Martyushev
- Materials Science Department, Tomsk Polytechnic University, 30 Lenin Ave., 634050 Tomsk, Russia
| | - Viktor V. Kondratiev
- Laboratory of Geochemistry of Ore Formation and Geochemical Methods of Prospecting, A. P. Vinogradov Institute of Geochemistry of the Siberian Branch of the Russian Academy of Sciences, 664033 Irkutsk, Russia
| | - Vadim S. Tynchenko
- Department of Technological Machines and Equipment of Oil and Gas Complex, School of Petroleum and Natural Gas Engineering, Siberian Federal University, 660041 Krasnoyarsk, Russia;
- Information-Control Systems Department, Institute of Computer Science and Telecommunications, Reshetnev Siberian State University of Science and Technology, 660037 Krasnoyarsk, Russia
- Artificial Intelligence Technology Scientific and Education Center, Bauman Moscow State Technical University, 105005 Moscow, Russia
| | - Vitaliy A. Gladkikh
- Stroytest Research and Testing Center, Moscow State University of Civil Engineering, 26 Yaroslavskoye Shosse, 129337 Moscow, Russia
| | - Liudmila V. Iushkova
- Basic Department, Higher School of Restaurant Management, Siberian Federal University, 660041 Krasnoyarsk, Russia
- Department of State and Municipal Administration, Siberian Fire and Rescue Academy of State Fire Service of the Ministry of Emergency Situations of Russia, 662972 Zheleznogorsk, Russia
| | - Vladimir Brigida
- Department of Biomedical, Veterinary and Ecological Directions, RUDN University, 6 Miklukho-Maklaya St., 117198 Moscow, Russia;
- Research Institute of Comprehensive Exploitation of Mineral Resources of the Russian Academy of Sciences, 4 Kryukovskiy Tupik, 111020 Moscow, Russia
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23
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Zou K, Zhu Y, Jiang Y, Ma S, Li M, Zhao W, Wang J. Distinct stochastic processes drive bacterial community assembly and co-occurrence patterns with common antibiotic resistance genes in two highly urbanised coastal ecosystems of the Pearl River Estuary. JOURNAL OF HAZARDOUS MATERIALS 2023; 459:132161. [PMID: 37523960 DOI: 10.1016/j.jhazmat.2023.132161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 07/15/2023] [Accepted: 07/25/2023] [Indexed: 08/02/2023]
Abstract
To comprehensively elucidate the ecology of the bacterial community and antibiotic resistance genes (ARGs) in urbanised coastal ecosystems, this study investigated the variations of bacterial community and five common types of ARGs, the impacting factors and assembly of bacterial community, as well as their co-occurrence relationships in two ecosystems of the Pearl River Estuary (PRE). The bacterial community composition and structure of the nearshore ecosystem (NSE) and the eight mouths of the PRE (EPR) markedly differed, with 38 phyla shared between these two ecosystems. The abundances of 10 ARGs and bacterial community diversity were significantly higher in the EPR than NSE. Moreover, 67.82% and 27.82% of the variation in the bacterial community was explained by spatial (44.42%/8.63%) and environmental (23.40%/19.19%) variables in the NSE and EPR, respectively. Significant distance-decay patterns were observed, and distinct stochastic processes (undominated processes or dispersal limitation) dominated bacterial community assembly in the NSE and EPR. Furthermore, co-occurrence patterns showed significant positive correlations between 48/182 ASVs belonging to 6/15 bacterial phyla and 8/11 ARGs in the NSE/EPR, with six common dominant hosts. These results clarify the drivers and mechanism shaping the bacterial community, providing further proof for potential ARG bacterial hosts in urbanised estuarine ecosystems.
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Affiliation(s)
- Keshu Zou
- Joint Laboratory of Guangdong Province and Hong Kong Region on Marine Bioresource Conservation and Exploitation, College of Marine Sciences, South China Agricultural University, 510642 Guangzhou, China.
| | - Yiyi Zhu
- Joint Laboratory of Guangdong Province and Hong Kong Region on Marine Bioresource Conservation and Exploitation, College of Marine Sciences, South China Agricultural University, 510642 Guangzhou, China
| | - Yun Jiang
- Joint Laboratory of Guangdong Province and Hong Kong Region on Marine Bioresource Conservation and Exploitation, College of Marine Sciences, South China Agricultural University, 510642 Guangzhou, China
| | - Shanshan Ma
- Joint Laboratory of Guangdong Province and Hong Kong Region on Marine Bioresource Conservation and Exploitation, College of Marine Sciences, South China Agricultural University, 510642 Guangzhou, China
| | - Min Li
- South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, 510300 Guangzhou, China; Scientific Observation and Research Field Station of Pearl River Estuary Ecosystem, Guangzhou 510300, Guangdong Province, China
| | - Wencheng Zhao
- Joint Laboratory of Guangdong Province and Hong Kong Region on Marine Bioresource Conservation and Exploitation, College of Marine Sciences, South China Agricultural University, 510642 Guangzhou, China
| | - Jun Wang
- Joint Laboratory of Guangdong Province and Hong Kong Region on Marine Bioresource Conservation and Exploitation, College of Marine Sciences, South China Agricultural University, 510642 Guangzhou, China.
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Zhang T, Zhang P, Pang W, Zhang Y, Alwathnani HA, Rensing C, Yang W. Increased Tolerance of Massion's pine to Multiple-Toxic-Metal Stress Mediated by Ectomycorrhizal Fungi. PLANTS (BASEL, SWITZERLAND) 2023; 12:3179. [PMID: 37765343 PMCID: PMC10535352 DOI: 10.3390/plants12183179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 08/26/2023] [Accepted: 08/26/2023] [Indexed: 09/29/2023]
Abstract
Pinus massoniana (Massion's pine), a pioneer tree species, exhibits restoration potential in polluted mining areas. However, the physiological and molecular mechanisms of ectomycorrhizal (ECM) fungi in Massion's pine adaptability to multiple-toxic-metal stress are still unclear. Hence, Massion's pine seedlings inoculated with two strains of C. geophilum, which were screened and isolated from a polluted mine area, were cultivated in mine soil for 90 days to investigate the roles of EMF in mediating toxic metal tolerance in host plants. The results showed that compared with the non-inoculation control, C. geophilum (CG1 and CG2) significantly promoted the biomass, root morphology, element absorption, photosynthetic characteristics, antioxidant enzyme activities (CAT, POD, and SOD), and proline content of Massion's pine seedlings in mine soil. C. geophilum increased the concentrations of Cr, Cd, Pb, and Mn in the roots of Massion's pine seedlings, with CG1 significantly increasing the concentrations of Pb and Mn by 246% and 162% and CG2 significantly increasing the concentrations of Cr and Pb by 102% and 78%. In contrast, C. geophilum reduced the concentrations of Cr, Cd, Pb, and Mn in the shoots by 14%, 33%, 27%, and 14% on average, respectively. In addition, C. geophilum significantly reduced the transfer factor (TF) of Cr, Cd, Pb, and Mn by 32-58%, 17-26%, 68-75%, and 18-64%, respectively, and the bio-concentration factor (BF) of Cd by 39-71%. Comparative transcriptomic analysis demonstrated that the differently expressed genes (DEGs) were mainly encoding functions involved in "transmembrane transport", "ion transport", "oxidation reduction process", "oxidative phosphorylation", "carbon metabolism", "glycolysis/gluconeogenesis", "photosynthesis", and "biosynthesis of amino acids." These results indicate that C. geophilum is able to mitigate toxic metals stress by promoting nutrient uptake, photosynthesis, and plant growth, thereby modulating the antioxidant system to reduce oxidative stress and reducing the transport and enrichment of toxic metals from the root to the shoot of Massion's pine seedlings.
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Affiliation(s)
- Taoxiang Zhang
- International Joint Laboratory of Forest Symbiology, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (T.Z.); (P.Z.); (W.P.); (Y.Z.)
| | - Panpan Zhang
- International Joint Laboratory of Forest Symbiology, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (T.Z.); (P.Z.); (W.P.); (Y.Z.)
| | - Wenbo Pang
- International Joint Laboratory of Forest Symbiology, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (T.Z.); (P.Z.); (W.P.); (Y.Z.)
| | - Yuhu Zhang
- International Joint Laboratory of Forest Symbiology, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (T.Z.); (P.Z.); (W.P.); (Y.Z.)
| | - Hend. A. Alwathnani
- Key Laboratory of Soil Ecosystem Health and Regulation of Fujian Provincial University, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (H.A.A.); (C.R.)
| | - Christopher Rensing
- Key Laboratory of Soil Ecosystem Health and Regulation of Fujian Provincial University, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (H.A.A.); (C.R.)
| | - Wenhao Yang
- Key Laboratory of Soil Ecosystem Health and Regulation of Fujian Provincial University, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (H.A.A.); (C.R.)
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25
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Pan WS, Zou Q, Hu M, Li WC, Xiong XR, Qi YT, Wu C. Microbial community composition and cooccurrence patterns driven by co-contamination of arsenic and antimony in antimony-mining area. JOURNAL OF HAZARDOUS MATERIALS 2023; 454:131535. [PMID: 37148793 DOI: 10.1016/j.jhazmat.2023.131535] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Revised: 04/08/2023] [Accepted: 04/27/2023] [Indexed: 05/08/2023]
Abstract
In the current study, a typical Sb mine was selected to explore the microbial community composition and assembly driven by the cocontamination of As/Sb with geographic distance. Our results showed that environmental parameters, especially pH, TOC, nitrate, total and bioavailable As/Sb contents largely affected the microbial community diversity and composition. The total and bioavailable As/Sb levels were significantly positively correlated with the relative abundance of Zavarzinella, Thermosporothrix and Holophaga, while the pH presented a significant negative correlation with the three genera, potentially implying they are important taxonomic groups in acid-mining soils. The cooccurrence network analysis indicated the environmental stress dominated by pH and As/Sb co-contamination affected the microbial modularity and interaction. Meanwhile, Homogeneous selection (HoS, 26.4-49.3%), and drift and others (DR, 27.1∼40.2%) were the most important assembly processes for soil bacterial, and the importance of HoS decreased and the DR increased with geographic distance to the contamination source respectively. Soil pH, nutrient availability, total and bioavailable As/Sb contents significantly affected the HoS and DR processes. This study provides theoretical support for microbial remediation in metal(loid)-contaminated soils.
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Affiliation(s)
- Wei-Song Pan
- College of Bioscience and Biotechnology, Hunan Agriculture University, Changsha 410128, China
| | - Qi Zou
- South China Institute of Environmental Sciences, MEE, Guangzhou 510535, China; School of Metallurgy and Environment, Central South University, Changsha 410083, China.
| | - Min Hu
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510520, China
| | - Wai-Chin Li
- Department of Science and Environmental Studies, The Education University of Hong Kong, Administrative Region, Hong Kong, China
| | - Xiao-Ran Xiong
- College of Bioscience and Biotechnology, Hunan Agriculture University, Changsha 410128, China
| | - Yan-Ting Qi
- School of Metallurgy and Environment, Central South University, Changsha 410083, China
| | - Chuan Wu
- School of Metallurgy and Environment, Central South University, Changsha 410083, China.
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26
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Li XT, Huang ZS, Huang Y, Jiang Z, Liang ZL, Yin HQ, Zhang GJ, Jia Y, Deng Y, Liu SJ, Jiang CY. Responses of microbial community to geochemical parameters on vertical depth in bioheap system of low-grade copper sulfide. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 869:161752. [PMID: 36690115 DOI: 10.1016/j.scitotenv.2023.161752] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Revised: 01/15/2023] [Accepted: 01/17/2023] [Indexed: 06/17/2023]
Abstract
Monitoring of the microbial community in bioleaching system is essential for control process parameters and enhance the leaching efficiency. Due to the difficulty of sampling, microbial distribution, community succession and bioleaching activity along the vertical depth of bioleaching heaps remain unresolved. This study investigated the geochemical parameters and microbial community structure along a depth profile in a bioleaching heap and leachate. 80 ore samples at different heap depths and 9 leaching solution samples from three bioheaps of Zijin Copper Mine were collected. Microbial composition, mineral types and geochemical parameters of these samples were analyzed by 16S rRNA high-throughput sequencing and a series of chemical measurement technologies. The results revealed that the pH, Cu, Fe and the total sulfur contents were the major factors shaping the composition of the microbial communities in the bioleaching system. The extent of mineral oxidation increased as the sample depth increases, followed by the increasing of sulfur oxidizers. The abundance of sulfur and iron oxidizers including members of Acidithiobacillus, Sulfobacillus and Acidiferrobacter were significantly higher in the leaching heap than in the leaching solution, meanwhile, they showed strong positive interactions with other members within the same genera and iron oxidizer Leptospirillum and Ferroplasma. Besides, Acidithiobacillus negatively interacted with heterotrophs such as Sphingobium, Exiguobacterium, Brevundimonas and so on. On the contrast, members of Leptospirillum and unclassified Archaea were significantly abundant in the leaching solution and revealed strong interactions with members of Thermoplasmatales. The main conclusion of this study, especially the leaching potential of microorganisms prevailing in bioheaps and their relationships with geochemical factors, provides theoretical guidance for future process design such as the control of processing parameters and microbial community in heap leaching.
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Affiliation(s)
- Xiu-Tong Li
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhong-Sheng Huang
- School of Metallurgy and Environment, Central South University, Changsha 410083, Hunan, China; Zijin Mining Group Company Limited, Shanghang 364200, Fujian, China
| | - Ye Huang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhen Jiang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zong-Lin Liang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hua-Qun Yin
- Key Laboratory of Biometallurgy of Ministry of Education, School of Minerals Processing and Bioengineering, Central South University, Changsha, China
| | - Guang-Ji Zhang
- Innovation Academy for Green Manufacture, Chinese Academy of Sciences, Beijing 100190, China; Institute of Process Engineering, Chinese Academy of Sciences, Beijing 100190, China
| | - Yan Jia
- Innovation Academy for Green Manufacture, Chinese Academy of Sciences, Beijing 100190, China; Institute of Process Engineering, Chinese Academy of Sciences, Beijing 100190, China
| | - Ye Deng
- Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Shuang-Jiang Liu
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Cheng-Ying Jiang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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Du L, Zhong S, Luo K, Yang S, Xia J, Chen Q. Effect of metal pollution on the distribution and co-occurrence pattern of bacterial, archaeal and fungal communities throughout the soil profiles. CHEMOSPHERE 2023; 315:137692. [PMID: 36596328 DOI: 10.1016/j.chemosphere.2022.137692] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Revised: 12/22/2022] [Accepted: 12/27/2022] [Indexed: 06/17/2023]
Abstract
Metal pollution has raised negative impact on microbes, but little is known about the distribution and co-occurrence pattern of bacterial, fungal and archaeal communities along the soil profiles at multiple metal contamination sites. Here, we characterized the variations of metal concentrations and microbial communities with soil depth along five deep bores at the Tanghe Sewage Reservoir, a typical metal contamination area on the North China Plain. Co, Cd, Mg, Se, and Li were identified as the major contaminants in this area, and the pollution load index was 1.88, 1.54 and 1.62 in the shallow layer (0-0.6 m), deep layer (>2.0 m) and middle layer (0.6-2.0 m), respectively. The diversities and compositions of bacterial, archaeal and fungal communities varied significantly along the soil profiles. Deterministic process played a crucial role in shaping the difference of microbial community compositions among different soil layers, in which metal levels contributed more than soil physiochemical parameters. Furthermore, the interspecific co-occurrence network was most complex in the middle layer, indicating that metal pollution could decrease microbial network complexity. Bacterial keystone species in the co-occurrence networks showed both positive and negative correlations with polluted metals, whereas most archaeal and fungal keystone species were negatively related to multiple metals. These findings increased our understanding of distribution patterns, co-occurrence networks and environmental drivers of microbial communities in metal pollution soils.
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Affiliation(s)
- Lei Du
- College of Life and Environmental Sciences, Minzu University of China, Beijing, 100081, PR China; College of Environmental Sciences and Engineering, Key Laboratory of Water and Sediment Sciences, Ministry of Education, Peking University, Beijing, 100871, PR China; State Environmental Protection Key Laboratory of All Material Fluxes in River Ecosystems, Beijing, 100871, PR China
| | - Sining Zhong
- Fujian Agriculture and Forestry University, College of Resources and Environment, Fujian Provincial Key Laboratory of Soil Environment Health and Regulation, Fuzhou, 350002, PR China
| | - Kongyan Luo
- College of Environmental Sciences and Engineering, Key Laboratory of Water and Sediment Sciences, Ministry of Education, Peking University, Beijing, 100871, PR China; State Environmental Protection Key Laboratory of All Material Fluxes in River Ecosystems, Beijing, 100871, PR China
| | - Shanqing Yang
- College of Environmental Sciences and Engineering, Key Laboratory of Water and Sediment Sciences, Ministry of Education, Peking University, Beijing, 100871, PR China; State Environmental Protection Key Laboratory of All Material Fluxes in River Ecosystems, Beijing, 100871, PR China
| | - Jianxin Xia
- College of Life and Environmental Sciences, Minzu University of China, Beijing, 100081, PR China.
| | - Qian Chen
- College of Environmental Sciences and Engineering, Key Laboratory of Water and Sediment Sciences, Ministry of Education, Peking University, Beijing, 100871, PR China; State Environmental Protection Key Laboratory of All Material Fluxes in River Ecosystems, Beijing, 100871, PR China.
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Golik VI, Klyuev RV, Martyushev NV, Brigida V, Efremenkov EA, Sorokova SN, Mengxu Q. Tailings Utilization and Zinc Extraction Based on Mechanochemical Activation. MATERIALS (BASEL, SWITZERLAND) 2023; 16:726. [PMID: 36676461 PMCID: PMC9865141 DOI: 10.3390/ma16020726] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Revised: 12/19/2022] [Accepted: 01/10/2023] [Indexed: 06/17/2023]
Abstract
The significant containment of the global mining industry is caused by the problem of the transition to sustainable metal extraction and the integrated use of technogenic raw materials from the tailings of ore processing. The modeling of metal leaching processes using mechanical activation of polymetallic raw material components is particularly important in expanding the application of mining tailings as inert fillers of filling mixtures. This study is aimed at detecting the rotor speed factor on the chemical and mechanochemical effect of zinc yield growth from polymetallic tailings of the mining industry. In this regard, the purpose of this study was to improve the modeling of metal leaching processes using mechanical activation by improving the compositions of the filling mixtures. The methodology of the work included several comprehensive studies: the mechanical activation of tailings during zinc leaching from pulp in the DESI-11 disintegrator; the activation of enrichment tailings and the formation of a filling mass with different parameters of the component composition; the curing of cubic samples and their testing on the IP-1250 press. The Vi Improved text editor was used to prepare the algorithms for deterministic methods of three-dimensional interpolation in the Python language. The experimental results were graphically displayed using Gnuplot. The study of the agitation leaching of the waste obtained from the Sadonskiy mining district results in the fact that the NaCl mass concentration decreased from 13 to 1% and the H2SO4 concentration stabilization within 0.5 to 0.6% led to a 3-time increase in the zinc yield from the pulp, according to the polynomial law (from 28 to 91%). The obtained results expand the idea of the mechanism of the strength gain by the filling mass under mechanical activation on the components of the filling mixture, as well as changes in the efficiency of zinc leaching at different ratios of two types of lixiviants (sulphuric acid and sodium chloride) in the leaching solution.
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Affiliation(s)
- Vladimir I. Golik
- Department “Technique and Technology of Mining and Oil and Gas Production”, Moscow Polytechnic University, 38, B. Semenovskaya St., Moscow 107023, Russia
| | - Roman V. Klyuev
- Department “Technique and Technology of Mining and Oil and Gas Production”, Moscow Polytechnic University, 38, B. Semenovskaya St., Moscow 107023, Russia
| | - Nikita V. Martyushev
- Department of Materials Science, Tomsk Polytechnic University, 30, Lenin Ave., Tomsk 634050, Russia
| | - Vladimir Brigida
- Federal Research Centre the Subtropical Scientific Centre, Russian Academy of Sciences, 2/28, Yana Fabritsiusa St., Sochi 354002, Russia
- Department of Biomedical, Veterinary and Ecological Directions, Peoples’ Friendship University of Russia (RUDN University), 6, Miklukho-Maklaya St., Moscow 117198, Russia
| | - Egor A. Efremenkov
- Department of Mechanical Engineering, Tomsk Polytechnic University, 30, Lenin Ave., Tomsk 634050, Russia
| | - Svetlana N. Sorokova
- Department of Mechanical Engineering, Tomsk Polytechnic University, 30, Lenin Ave., Tomsk 634050, Russia
| | - Qi Mengxu
- Department of Materials Science, Tomsk Polytechnic University, 30, Lenin Ave., Tomsk 634050, Russia
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Guo J, Wei Z, Zhang C, Li C, Dai L, Lu X, Xiao K, Mao X, Yang X, Jing Y, Zhang J, Chen W, Qi S. Characteristics and DGT Based Bioavailability of Cadmium in the Soil-Crop Systems from the East Edge of the Dongting Lake, China. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 20:30. [PMID: 36612351 PMCID: PMC9819749 DOI: 10.3390/ijerph20010030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Revised: 12/13/2022] [Accepted: 12/14/2022] [Indexed: 06/17/2023]
Abstract
Contamination of heavy metals (including the cadmium, Cd) in agricultural soils has become an increased issue, posing a threat to the crop safety and human health. In order to evaluate the contamination characteristics and bioavailability of Cd in the soil−crop systems from the East edge of the Dongting Lake, four kinds of agricultural products for typical crops (rice, peanut, sweet potato, and corn) and corresponding rhizosphere soils were collected and analyzed for the Cd concentrations. The technique of diffusive gradients in thin-films (DGT) was applied to evaluate the Cd bioavailability in the rhizosphere soils. Concentrations of Cd ranged from 0.04 to 2.95 mg/kg (average 0.24 mg/kg) with 73.9% sites above the background levels, especially for paddy soils. Cd concentrations in the agricultural products ranged from 0.01 to 2.19 mg/kg (average 0.18 mg/kg), with Cd enrichment observed in the peanut samples. No obvious correlations (R2 < 0.25) were observed between the Cd concentrations in the agricultural products and total Cd concentrations in the rhizosphere soils, this indicated that the total Cd concentrations in the soils cannot predict the concentrations in the agricultural products of crops. While the DGT measured Cd concentrations showed good correlations (R2 = 0.64−0.90) with the concentrations in the most agricultural products of crops, which may be used to evaluate the safety of the soil and further safety of the agricultural products of crops. Overall, DGT showed a good potential for prediction of heavy metal bioavailability in soil since the DGT technique can simulate the sustained supply of heavy metals from solid to liquid in the soils.
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Affiliation(s)
- Jun Guo
- Changsha Natural Resources Comprehensive Investigation Center, China Geological Survey, Changsha 410600, China
- Hubei Key Laboratory of Mine Environmental Pollution Control and Remediation, Hubei Polytechnic University, Huangshi 435003, China
| | - Zhiying Wei
- School of Environmental Studies and Hubei Key Laboratory of Yangtze Catchment Environmental Aquatic Science, China University of Geosciences, Wuhan 430078, China
| | - Chao Zhang
- School of Environmental Studies and Hubei Key Laboratory of Yangtze Catchment Environmental Aquatic Science, China University of Geosciences, Wuhan 430078, China
| | - Cong Li
- Changsha Natural Resources Comprehensive Investigation Center, China Geological Survey, Changsha 410600, China
| | - Liangliang Dai
- Changsha Natural Resources Comprehensive Investigation Center, China Geological Survey, Changsha 410600, China
| | - Xin Lu
- Changsha Natural Resources Comprehensive Investigation Center, China Geological Survey, Changsha 410600, China
| | - Kaiqi Xiao
- Changsha Natural Resources Comprehensive Investigation Center, China Geological Survey, Changsha 410600, China
| | - Xiong Mao
- Changsha Natural Resources Comprehensive Investigation Center, China Geological Survey, Changsha 410600, China
| | - Xiuwen Yang
- School of Environmental Studies and Hubei Key Laboratory of Yangtze Catchment Environmental Aquatic Science, China University of Geosciences, Wuhan 430078, China
| | - Yiming Jing
- School of Environmental Studies and Hubei Key Laboratory of Yangtze Catchment Environmental Aquatic Science, China University of Geosciences, Wuhan 430078, China
| | - Jiaquan Zhang
- Hubei Key Laboratory of Mine Environmental Pollution Control and Remediation, Hubei Polytechnic University, Huangshi 435003, China
- School of Environmental Science and Engineering, Hubei Polytechnic University, Huangshi 435003, China
| | - Wei Chen
- Hubei Key Laboratory of Mine Environmental Pollution Control and Remediation, Hubei Polytechnic University, Huangshi 435003, China
- School of Environmental Studies and Hubei Key Laboratory of Yangtze Catchment Environmental Aquatic Science, China University of Geosciences, Wuhan 430078, China
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430078, China
| | - Shihua Qi
- School of Environmental Studies and Hubei Key Laboratory of Yangtze Catchment Environmental Aquatic Science, China University of Geosciences, Wuhan 430078, China
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430078, China
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