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Norman JF, Rahsepar B, Vena A, Thunemann M, Devor A, Ramirez S, White JA. Reactivation of memory-associated neurons induces downstream suppression of competing neuronal populations. Proc Natl Acad Sci U S A 2025; 122:e2410101122. [PMID: 40168126 PMCID: PMC12002025 DOI: 10.1073/pnas.2410101122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2024] [Accepted: 03/03/2025] [Indexed: 04/03/2025] Open
Abstract
Inducing apparent memory recall by tagging and optogenetically reactivating cells in the hippocampus was demonstrated over a decade ago. However, the hippocampal dynamics resulting from this reactivation remain largely unknown. While calcium imaging is commonly used as a measure of neuronal activity, GCaMP, the most common calcium indicator, cannot be used with optogenetic neuronal reactivation because both require blue light excitation. To resolve this overlap, we demonstrate optogenetic reactivation with a red-shifted opsin, ChrimsonR. We then conduct dual-color calcium imaging in CA1 during memory reactivation in DG. In addition to measuring population dynamics in CA1, CA1 cells tagged during the original experience were identified. In the fear-conditioned animals (FC+), nontagged cells in CA1 decreased their firing rate during stimulation, while tagged cells maintained their activity level. In the FC+ animals, as the behavioral effect of stimulation decreased across days, so did the changes in neural activity during stimulation. Our results both demonstrate the technical feasibility of calcium imaging during optogenetic reactivation of memory-associated neurons and advance our understanding of the dynamics underlying this reactivation.
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Affiliation(s)
- Jacob F. Norman
- Department of Biomedical Engineering, Boston University, Boston, MA02215
- Center for Systems Neuroscience, Neurophotonics Center, Boston University, Boston, MA02215
| | - Bahar Rahsepar
- Department of Biomedical Engineering, Boston University, Boston, MA02215
- Center for Systems Neuroscience, Neurophotonics Center, Boston University, Boston, MA02215
| | - Anna Vena
- Department of Biomedical Engineering, Boston University, Boston, MA02215
| | - Martin Thunemann
- Department of Biomedical Engineering, Boston University, Boston, MA02215
- Center for Systems Neuroscience, Neurophotonics Center, Boston University, Boston, MA02215
| | - Anna Devor
- Department of Biomedical Engineering, Boston University, Boston, MA02215
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Harvard Medical School, Charlestown, MA02215
| | - Steve Ramirez
- Department of Biomedical Engineering, Boston University, Boston, MA02215
- Center for Systems Neuroscience, Neurophotonics Center, Boston University, Boston, MA02215
- Department of Psychological and Brain Sciences, Boston University, Boston, MA02215
| | - John A. White
- Department of Biomedical Engineering, Boston University, Boston, MA02215
- Center for Systems Neuroscience, Neurophotonics Center, Boston University, Boston, MA02215
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2
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Zimmerman CA, Bolkan SS, Pan-Vazquez A, Wu B, Keppler EF, Meares-Garcia JB, Guthman EM, Fetcho RN, McMannon B, Lee J, Hoag AT, Lynch LA, Janarthanan SR, López Luna JF, Bondy AG, Falkner AL, Wang SSH, Witten IB. A neural mechanism for learning from delayed postingestive feedback. Nature 2025:10.1038/s41586-025-08828-z. [PMID: 40175547 DOI: 10.1038/s41586-025-08828-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Accepted: 02/21/2025] [Indexed: 04/04/2025]
Abstract
Animals learn the value of foods on the basis of their postingestive effects and thereby develop aversions to foods that are toxic1-10 and preferences to those that are nutritious11-13. However, it remains unclear how the brain is able to assign credit to flavours experienced during a meal with postingestive feedback signals that can arise after a substantial delay. Here we reveal an unexpected role for the postingestive reactivation of neural flavour representations in this temporal credit-assignment process. To begin, we leverage the fact that mice learn to associate novel14,15, but not familiar, flavours with delayed gastrointestinal malaise signals to investigate how the brain represents flavours that support aversive postingestive learning. Analyses of brain-wide activation patterns reveal that a network of amygdala regions is unique in being preferentially activated by novel flavours across every stage of learning (consumption, delayed malaise and memory retrieval). By combining high-density recordings in the amygdala with optogenetic stimulation of malaise-coding hindbrain neurons, we show that delayed malaise signals selectively reactivate flavour representations in the amygdala from a recent meal. The degree of malaise-driven reactivation of individual neurons predicts the strengthening of flavour responses upon memory retrieval, which in turn leads to stabilization of the population-level representation of the recently consumed flavour. By contrast, flavour representations in the amygdala degrade in the absence of unexpected postingestive consequences. Thus, we demonstrate that postingestive reactivation and plasticity of neural flavour representations may support learning from delayed feedback.
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Affiliation(s)
| | - Scott S Bolkan
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Bichan Wu
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Emma F Keppler
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Eartha Mae Guthman
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Robert N Fetcho
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Brenna McMannon
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Junuk Lee
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Austin T Hoag
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Laura A Lynch
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Juan F López Luna
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Adrian G Bondy
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Annegret L Falkner
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Samuel S-H Wang
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Ilana B Witten
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
- Howard Hughes Medical Institute, Princeton University, Princeton, NJ, USA.
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3
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Chen H, Wang B, Zhan Y, Liu J, Yang S, Tan X, Zhang W, Zhang J, Yang Y, Liu Y, Wang M, Zhang H, Li X, Yao Z, Pema D, Li H, Chen H, Hu B. Dynamics of hippocampal reactivation for temporal association memory in mice. Prog Neurobiol 2025; 247:102729. [PMID: 40023311 DOI: 10.1016/j.pneurobio.2025.102729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2024] [Revised: 02/16/2025] [Accepted: 02/18/2025] [Indexed: 03/04/2025]
Abstract
Reactivation refers to the re-emergence of activity in neuronal ensembles that were active during information encoding. Hippocampal CA1 neuronal ensembles generate firing activities that encode the temporal association among time-separated events. However, whether and how temporal association memory-related CA1 neuronal ensembles reactivate during sleep and their role in temporal association memory consolidation remain unclear. We utilized multiple unit recordings to monitor CA1 neuronal activity in mice learning a trace eyeblink conditioning (tEBC) task, in which presentation of the conditioned stimulus (CS, a light flash) was paired with presentation of the unconditioned stimulus (US, corneal puff) by a time-separated interval. We found that the CS-US paired training mice exhibited few conditioned eyeblink responses (CRs) at the initial-learning stage (ILS) and an asymptotic level of CRs at the well-learning stage (WLS). More than one third of CA1 pyramidal cells (PYR) in the CS-US paired training mice manifested a CS-evoked firing activity that was sustained from the CS to time-separated interval. The CS-evoked PYR firing activity was required for the tEBC acquisition and was greater when the CRs occurred. Intriguingly, the CS-evoked firing PYR ensembles reactivated, which coincided with increased hippocampal ripples during post-training sleep. The reactivation of CS-evoked firing PYR ensembles diminished across learning stages, with greater strength in the ILS. Disrupting the ripple-associated PYR activity impaired both the reactivation of CS-evoked firing PYR ensembles and tEBC consolidation. Our findings highlight the features of hippocampal CA1 neuronal ensemble reactivation during sleep, which support the consolidation of temporal association memory.
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Affiliation(s)
- Hui Chen
- Department of Physiology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China; Department of Radiology, 7T Magnetic Resonance Translational Medicine Research Center, Southwest Hospital, Army Medical University, Chongqing 400038, China
| | - Bin Wang
- Department of Histology and Embryology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Yue Zhan
- Department of Histology and Embryology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Junqi Liu
- Department of Histology and Embryology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Sicheng Yang
- Experimental Center of Basic Medicine, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Xuan Tan
- Experimental Center of Basic Medicine, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Weiwei Zhang
- Department of Physiology, School of Basic Medicine, Sichuan College of Traditional Chinese Medicine, Mianyang 621000, China
| | - Jie Zhang
- Department of Physiology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Ye Yang
- Department of Physiology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Yanji Liu
- Experimental Center of Basic Medicine, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Meilin Wang
- Department of Histology and Embryology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Haibo Zhang
- Department of Physiology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Xuan Li
- Experimental Center of Basic Medicine, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Zhongxiang Yao
- Department of Physiology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Drolma Pema
- Experimental Center of Basic Medicine, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China
| | - Hongli Li
- Experimental Center of Basic Medicine, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China.
| | - Hao Chen
- Department of Histology and Embryology, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China; Experimental Center of Basic Medicine, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China.
| | - Bo Hu
- Experimental Center of Basic Medicine, College of Basic Medical Sciences, Army Medical University, Chongqing 400038, China.
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Dorian CC, Taxidis J, Buonomano D, Golshani P. Hippocampal sequences represent working memory and implicit timing. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.03.17.643736. [PMID: 40166270 PMCID: PMC11956965 DOI: 10.1101/2025.03.17.643736] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
Abstract
Working memory (WM) and timing are considered distinct cognitive functions, yet the neural signatures underlying both can be similar. To address the hypothesis that WM and timing may be multiplexed we developed a novel rodent task where 1st odor identity predicts the delay duration. We found that WM performance decreased when delay expectations were violated. Performance was worse for unexpected long delays than for unexpected short delays, suggesting that WM may be tuned to expire in a delay-dependent manner. Calcium imaging of dorsal CA1 neurons revealed odor-specific sequential activity tiling the short and long delays. Neural sequence structure also reflected expectation of the timing of the 2nd odor-i.e., of the expected delay. Consistent with the hypothesis that WM and timing may be multiplexed, our findings suggest that neural sequences in dorsal CA1 may encode cues and cue-specific elapsed time during the delay period of a WM task.
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Affiliation(s)
- Conor C. Dorian
- Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
| | - Jiannis Taxidis
- Program in Neurosciences and Mental Health, The Hospital for Sick Children, Toronto, Ontario, Canada
- Department of Physiology, University of Toronto, Toronto, Ontario, Canada
| | - Dean Buonomano
- Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
- Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
- Department of Psychology, University of California Los Angeles, Los Angeles, CA, USA
| | - Peyman Golshani
- Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
- Greater Los Angeles Veteran Affairs Medical Center, Los Angeles, CA, USA
- Intellectual and Developmental Disabilities Research Center, University of California Los Angeles, Los Angeles, CA, USA
- Semel Institute for Neuroscience and Human Behavior, University of California, Los Angeles, CA, USA
- Integrative Center for Learning and Memory, University of California, Los Angeles, CA, USA
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5
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Bowler JC, Zakka G, Yong HC, Li W, Rao B, Liao Z, Priestley JB, Losonczy A. An Intranet of Things approach for adaptable control of behavioral and navigation-based experiments. eLife 2025; 13:RP97433. [PMID: 40008867 PMCID: PMC11867614 DOI: 10.7554/elife.97433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2025] Open
Abstract
Investigators conducting behavioral experiments often need precise control over the timing of the delivery of stimuli to subjects and to collect precise times of subsequent behavioral responses. Furthermore, investigators want fine-tuned control over how various multi-modal cues are presented. behaviorMate takes an 'Intranet of Things' approach, using a networked system of hardware and software components for achieving these goals. The system outputs a file with integrated timestamp-event pairs that investigators can then format and process using their own analysis pipelines. We present an overview of the electronic components and GUI application that make up behaviorMate as well as mechanical designs for compatible experimental rigs to provide the reader with the ability to set up their own system. A wide variety of paradigms are supported, including goal-oriented learning, random foraging, and context switching. We demonstrate behaviorMate's utility and reliability with a range of use cases from several published studies and benchmark tests. Finally, we present experimental validation demonstrating different modalities of hippocampal place field studies. Both treadmill with burlap belt and virtual reality with running wheel paradigms were performed to confirm the efficacy and flexibility of the approach. Previous solutions rely on proprietary systems that may have large upfront costs or present frameworks that require customized software to be developed. behaviorMate uses open-source software and a flexible configuration system to mitigate both concerns. behaviorMate has a proven record for head-fixed imaging experiments and could be easily adopted for task control in a variety of experimental situations.
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Affiliation(s)
- John C Bowler
- Department of Neuroscience, Columbia UniversityNew YorkUnited States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia UniversityNew YorkUnited States
- Department of Neurobiology, University of UtahSalt Lake CityUnited States
| | - George Zakka
- Department of Neuroscience, Columbia UniversityNew YorkUnited States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia UniversityNew YorkUnited States
| | - Hyun Choong Yong
- Department of Neuroscience, Columbia UniversityNew YorkUnited States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia UniversityNew YorkUnited States
| | - Wenke Li
- AquabyteSan FranciscoUnited States
| | - Bovey Rao
- Department of Neuroscience, Columbia UniversityNew YorkUnited States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia UniversityNew YorkUnited States
- Doctoral Program in Neurobiology and Behavior, Columbia UniversityNew YorkUnited States
| | - Zhenrui Liao
- Department of Neuroscience, Columbia UniversityNew YorkUnited States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia UniversityNew YorkUnited States
| | - James B Priestley
- Brain Mind Institute, École polytechnique fédérale de LausanneLausanneSwitzerland
| | - Attila Losonczy
- Department of Neuroscience, Columbia UniversityNew YorkUnited States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia UniversityNew YorkUnited States
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6
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Moreira ALP, Menezes FP, da Silva Junior FC, Luchiari AC. Duration of aversive memory in zebrafish after a single shock. Prog Neuropsychopharmacol Biol Psychiatry 2025; 136:111182. [PMID: 39471884 DOI: 10.1016/j.pnpbp.2024.111182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/30/2024] [Revised: 10/09/2024] [Accepted: 10/24/2024] [Indexed: 11/01/2024]
Abstract
Studies on memory consolidation and reconsolidation, memory loss, and the associated biochemical mechanisms have garnered interest in the past decades due to knowledge of memory performance-affecting factors such as stress, emotions, sleep, age, several neurological diseases, drugs, and chemical pollutants. Memory research has been using animal models, with increased interest in the zebrafish model. This freshwater fish species shows a wide range of behaviors relevant to memory research such as social behavior, aggression, and predator avoidance; however, few studies have investigated the duration of long-term memory. Hence, we designed an experiment to test memory duration by exposing zebrafish to avoidance conditioning using electroshock as the aversive stimulus. Zebrafish were trained to avoid the black side of a black-and-white tank and subsequently tested for aversive memory at 24 h, 48 h, 72 h, 96 h, 168 h, and 240 h. At the 72 h-interval, another zebrafish group was trained and exposed to MK-801(NMDAr antagonist) and then tested. The fish retained memories of the task and avoided the black side of the tank for up to 7 days. At 10 days post-training, the animals could no longer retrieve the aversive memory. Zebrafish treated with MK-801 did not retrieve memory. Knowledge of memory and of long-term memory duration is crucial for optimizing the zebrafish model for use in research investigating cognitive impairments such as memory loss and its ramifications. Additionally, identifying a long-term aversive memory lasting up to 7 days in zebrafish enables further research into the neuronal changes underlying this persistence. Such in-depth investigation could bring valuable insights into memory mechanisms and facilitate targeted interventions for memory-related conditions.
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Affiliation(s)
- Ana Luisa Pires Moreira
- Pharmaceutical and Medicine Research Institute (IPeFarM), Psychopharmacology Laboratory, Federal University of Paraíba, Brazil
| | - Fabiano Peres Menezes
- Brazilian Institute of Environmental and Renewable natural Resources (IBAMA), Rio Grande, 96200-180, RS, Brazil
| | | | - Ana Carolina Luchiari
- Fish Lab, Department of Physiology and Behavior, Biosciences Center, Graduate Program in Psychobiology, Federal University of Rio Grande do Norte, Brazil.
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7
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Xia F, Fascianelli V, Vishwakarma N, Ghinger FG, Kwon A, Gergues MM, Lalani LK, Fusi S, Kheirbek MA. Understanding the neural code of stress to control anhedonia. Nature 2025; 637:654-662. [PMID: 39633053 PMCID: PMC11735319 DOI: 10.1038/s41586-024-08241-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Accepted: 10/17/2024] [Indexed: 12/07/2024]
Abstract
Anhedonia, the diminished drive to seek, value, and learn about rewards, is a core feature of major depressive disorder1-3. The neural underpinnings of anhedonia and how this emotional state drives behaviour remain unclear. Here we investigated the neural code of anhedonia by taking advantage of the fact that when mice are exposed to traumatic social stress, susceptible animals become socially withdrawn and anhedonic, whereas others remain resilient. By performing high-density electrophysiology to record neural activity patterns in the basolateral amygdala (BLA) and ventral CA1 (vCA1), we identified neural signatures of susceptibility and resilience. When mice actively sought rewards, BLA activity in resilient mice showed robust discrimination between reward choices. By contrast, susceptible mice exhibited a rumination-like signature, in which BLA neurons encoded the intention to switch or stay on a previously chosen reward. Manipulation of vCA1 inputs to the BLA in susceptible mice rescued dysfunctional neural dynamics, amplified dynamics associated with resilience, and reversed anhedonic behaviour. Finally, when animals were at rest, the spontaneous BLA activity of susceptible mice showed a greater number of distinct neural population states. This spontaneous activity allowed us to decode group identity and to infer whether a mouse had a history of stress better than behavioural outcomes alone. This work reveals population-level neural dynamics that explain individual differences in responses to traumatic stress, and suggests that modulating vCA1-BLA inputs can enhance resilience by regulating these dynamics.
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Affiliation(s)
- Frances Xia
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Valeria Fascianelli
- Center for Theoretical Neuroscience, Columbia University, New York, NY, USA
- Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Nina Vishwakarma
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
| | - Frances Grace Ghinger
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Andrew Kwon
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Mark M Gergues
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA, USA
| | - Lahin K Lalani
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA, USA
| | - Stefano Fusi
- Center for Theoretical Neuroscience, Columbia University, New York, NY, USA
- Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
- Department of Neuroscience, Vagelos College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Kavli Institute for Brain Science, Columbia University Irving Medical Center, New York, NY, USA
| | - Mazen A Kheirbek
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA.
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA.
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA, USA.
- Kavli Institute for Fundamental Neuroscience, University of California, San Francisco, San Francisco, CA, USA.
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8
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Hong S, Baek SH, Lai MKP, Arumugam TV, Jo DG. Aging-associated sensory decline and Alzheimer's disease. Mol Neurodegener 2024; 19:93. [PMID: 39633396 PMCID: PMC11616278 DOI: 10.1186/s13024-024-00776-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Accepted: 11/08/2024] [Indexed: 12/07/2024] Open
Abstract
Multisensory decline is common as people age, and aging is the primary risk of Alzheimer's Disease (AD). Recent studies have begun to shed light on the possibility that age-related sensory decline could accelerate AD pathogenesis, or be a prodromal indicator of AD. Sensory impairments, specifically in taste and smell, often emerge before cognitive symptoms in AD, indicating their potential as early biomarkers. Olfactory dysfunction has been frequently associated with AD and may offer valuable insights into early detection. Hearing impairment is significantly associated with AD, but its causal impact on AD progression remains unclear. The review also discusses visual and tactile deficits in AD, including retinal thinning and changes in tactile perception, highlighting their links to disease progression. Focusing on molecular mechanisms, the review explores the roles of amyloid-β (Aβ) accumulation and tau protein pathology in sensory decline and their bidirectional relationship with AD. In summary, the evidence presented conclusively supports advocating for an integrated approach to understanding AD and sensory decline, to enhance early detection, implementing preventive strategies, and developing therapeutic interventions for AD. This approach underscores the significance of sensory health in addressing neurodegenerative diseases, particularly AD.
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Affiliation(s)
- Suji Hong
- The School of Pharmacy, Sungkyunkwan University, Suwon, 16419, Republic of Korea
| | - Seung-Hyun Baek
- The School of Pharmacy, Sungkyunkwan University, Suwon, 16419, Republic of Korea
| | - Mitchell K P Lai
- Department of Pharmacology, Yong Loo Lin School of Medicine, Singapore, 117600, Singapore
| | - Thiruma V Arumugam
- The School of Pharmacy, Sungkyunkwan University, Suwon, 16419, Republic of Korea.
- Centre for Cardiovascular Biology and Disease Research, La Trobe Institute for Molecular Science, Department of Microbiology, Anatomy, Physiology and Pharmacology, School of Agriculture, Biomedicine and Environment, La Trobe University, Melbourne, 3086, Australia.
| | - Dong-Gyu Jo
- The School of Pharmacy, Sungkyunkwan University, Suwon, 16419, Republic of Korea.
- Biomedical Institute for Convergence at SKKU (BICS), Suwon, 16419, Republic of Korea.
- Department of Health Sciences and Technology, SAIHST, Sungkyunkwan University, Seoul, 06355, Republic of Korea.
- Institute of Quantum Biophysics, Sungkyunkwan University, Suwon, 16419, Republic of Korea.
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9
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Mishchanchuk K, Gregoriou G, Qü A, Kastler A, Huys QJM, Wilbrecht L, MacAskill AF. Hidden state inference requires abstract contextual representations in the ventral hippocampus. Science 2024; 386:926-932. [PMID: 39571013 DOI: 10.1126/science.adq5874] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2024] [Accepted: 10/16/2024] [Indexed: 11/24/2024]
Abstract
The ability to use subjective, latent contextual representations to influence decision-making is crucial for everyday life. The hippocampus is hypothesized to bind together otherwise abstract combinations of stimuli to represent such latent contexts, to support the process of hidden state inference. Yet evidence for a role of the hippocampus in hidden state inference remains limited. We found that the ventral hippocampus is required for mice to perform hidden state inference during a two-armed bandit task. Hippocampal neurons differentiate the two abstract contexts required for this strategy in a manner similar to the differentiation of spatial locations, and their activity is essential for appropriate dopamine dynamics. These findings offer insight into how latent contextual information is used to optimize decisions, and they emphasize a key role for the hippocampus in hidden state inference.
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Affiliation(s)
- Karyna Mishchanchuk
- Department of Neuroscience, Physiology and Pharmacology, University College London, London, UK
| | - Gabrielle Gregoriou
- Department of Neuroscience, Physiology and Pharmacology, University College London, London, UK
| | - Albert Qü
- Helen Wills Institute of Neuroscience, Department of Psychology, University of California, Berkeley, CA, USA
- Center for Computational Biology, University of California, Berkeley, CA, USA
| | - Alizée Kastler
- Department of Neuroscience, Physiology and Pharmacology, University College London, London, UK
| | - Quentin J M Huys
- Applied Computational Psychiatry Lab, Mental Health Neuroscience Department, Division of Psychiatry and Max Planck UCL Centre for Computational Psychiatry and Ageing Research, Queen Square Institute of Neurology, University College London, London, UK
| | - Linda Wilbrecht
- Helen Wills Institute of Neuroscience, Department of Psychology, University of California, Berkeley, CA, USA
| | - Andrew F MacAskill
- Department of Neuroscience, Physiology and Pharmacology, University College London, London, UK
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10
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Bowler JC, Zakka G, Yong HC, Li W, Rao B, Liao Z, Priestley JB, Losonczy A. behaviorMate: An Intranet of Things Approach for Adaptable Control of Behavioral and Navigation-Based Experiments. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.12.04.569989. [PMID: 38116032 PMCID: PMC10729741 DOI: 10.1101/2023.12.04.569989] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 12/21/2023]
Abstract
Investigators conducting behavioral experiments often need precise control over the timing of the delivery of stimuli to subjects and to collect the precise times of the subsequent behavioral responses. Furthermore, investigators want fine-tuned control over how various multi-modal cues are presented. behaviorMate takes an "Intranet of Things" approach, using a networked system of hardware and software components for achieving these goals. The system outputs a file with integrated timestamp-event pairs that investigators can then format and process using their own analysis pipelines. We present an overview of the electronic components and GUI application that make up behaviorMate as well as mechanical designs for compatible experimental rigs to provide the reader with the ability to set up their own system. A wide variety of paradigms are supported, including goal-oriented learning, random foraging, and context switching. We demonstrate behaviorMate's utility and reliability with a range of use cases from several published studies and benchmark tests. Finally, we present experimental validation demonstrating different modalities of hippocampal place field studies. Both treadmill with burlap belt and virtual reality with running wheel paradigms were performed to confirm the efficacy and flexibility of the approach. Previous solutions rely on proprietary systems that may have large upfront costs or present frameworks that require customized software to be developed. behaviorMate uses open-source software and a flexible configuration system to mitigate both concerns. behaviorMate has a proven record for head-fixed imaging experiments and could be easily adopted for task control in a variety of experimental situations.
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Affiliation(s)
- John C. Bowler
- Department of Neuroscience
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027 USA
- Department of Neurobiology University of Utah, Salt Lake City, UT 84112, USA
| | - George Zakka
- Department of Neuroscience
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027 USA
| | - Hyun Choong Yong
- Department of Neuroscience
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027 USA
| | - Wenke Li
- Aquabyte, San Francisco, CA 94111
| | - Bovey Rao
- Department of Neuroscience
- Doctoral Program in Neurobiology and Behavior
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027 USA
| | - Zhenrui Liao
- Department of Neuroscience
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027 USA
| | | | - Attila Losonczy
- Department of Neuroscience
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027 USA
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11
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Zimmerman CA, Bolkan SS, Pan-Vazquez A, Wu B, Keppler EF, Meares-Garcia JB, Guthman EM, Fetcho RN, McMannon B, Lee J, Hoag AT, Lynch LA, Janarthanan SR, López Luna JF, Bondy AG, Falkner AL, Wang SSH, Witten IB. A neural mechanism for learning from delayed postingestive feedback. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.10.06.561214. [PMID: 37873112 PMCID: PMC10592633 DOI: 10.1101/2023.10.06.561214] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
Abstract
Animals learn the value of foods based on their postingestive effects and thereby develop aversions to foods that are toxic1-6 and preferences to those that are nutritious7-14. However, it remains unclear how the brain is able to assign credit to flavors experienced during a meal with postingestive feedback signals that can arise after a substantial delay. Here, we reveal an unexpected role for postingestive reactivation of neural flavor representations in this temporal credit assignment process. To begin, we leverage the fact that mice learn to associate novel15-18, but not familiar, flavors with delayed gastric malaise signals to investigate how the brain represents flavors that support aversive postingestive learning. Surveying cellular resolution brainwide activation patterns reveals that a network of amygdala regions is unique in being preferentially activated by novel flavors across every stage of the learning process: the initial meal, delayed malaise, and memory retrieval. By combining high-density recordings in the amygdala with optogenetic stimulation of genetically defined hindbrain malaise cells, we find that postingestive malaise signals potently and specifically reactivate amygdalar novel flavor representations from a recent meal. The degree of malaise-driven reactivation of individual neurons predicts strengthening of flavor responses upon memory retrieval, leading to stabilization of the population-level representation of the recently consumed flavor. In contrast, meals without postingestive consequences degrade neural flavor representations as flavors become familiar and safe. Thus, our findings demonstrate that interoceptive reactivation of amygdalar flavor representations provides a neural mechanism to resolve the temporal credit assignment problem inherent to postingestive learning.
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Affiliation(s)
| | - Scott S Bolkan
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Bichan Wu
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Emma F Keppler
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Eartha Mae Guthman
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Robert N Fetcho
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Brenna McMannon
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Junuk Lee
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Austin T Hoag
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Laura A Lynch
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Juan F López Luna
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Adrian G Bondy
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Annegret L Falkner
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Samuel S-H Wang
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Ilana B Witten
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Howard Hughes Medical Institute, Princeton University, Princeton, NJ, USA
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12
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Kunčická D, Krajčovič B, Stuchlík A, Brožka H. Neuroscientist's Behavioral Toolbox for Studying Episodic-Like Memory. eNeuro 2024; 11:ENEURO.0073-24.2024. [PMID: 39214694 PMCID: PMC11366770 DOI: 10.1523/eneuro.0073-24.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 07/12/2024] [Accepted: 07/22/2024] [Indexed: 09/04/2024] Open
Abstract
Episodic memory, the ability to recall specific events and experiences, is a cornerstone of human cognition with profound clinical implications. While animal studies have provided valuable insights into the neuronal underpinnings of episodic memory, research has largely relied on a limited subset of tasks that model only some aspects of episodic memory. In this narrative review, we provide an overview of rodent episodic-like memory tasks that expand the methodological repertoire and diversify the approaches used in episodic-like memory research. These tasks assess various aspects of human episodic memory, such as integrated what-where-when or what-where memory, source memory, free recall, temporal binding, and threshold retrieval dynamics. We review each task's general principle and consider whether alternative non-episodic mechanisms can account for the observed behavior. While our list of tasks is not exhaustive, we hope it will guide researchers in selecting models that align with their specific research objectives, leading to novel advancements and a more comprehensive understanding of mechanisms underlying specific aspects of episodic memory.
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Affiliation(s)
- Daniela Kunčická
- Laboratory of Neurophysiology of Memory, Institute of Physiology, Czech Academy of Sciences, Prague 142 20, Czechia
| | - Branislav Krajčovič
- Department of Physiology, Second Faculty of Medicine, Charles University, Prague 150 06, Czechia
| | - Aleš Stuchlík
- Laboratory of Neurophysiology of Memory, Institute of Physiology, Czech Academy of Sciences, Prague 142 20, Czechia
| | - Hana Brožka
- Laboratory of Neurophysiology of Memory, Institute of Physiology, Czech Academy of Sciences, Prague 142 20, Czechia
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13
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Mizuta K, Sato M. Multiphoton imaging of hippocampal neural circuits: techniques and biological insights into region-, cell-type-, and pathway-specific functions. NEUROPHOTONICS 2024; 11:033406. [PMID: 38464393 PMCID: PMC10923542 DOI: 10.1117/1.nph.11.3.033406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Revised: 01/31/2024] [Accepted: 02/06/2024] [Indexed: 03/12/2024]
Abstract
Significance The function of the hippocampus in behavior and cognition has long been studied primarily through electrophysiological recordings from freely moving rodents. However, the application of optical recording methods, particularly multiphoton fluorescence microscopy, in the last decade or two has dramatically advanced our understanding of hippocampal function. This article provides a comprehensive overview of techniques and biological findings obtained from multiphoton imaging of hippocampal neural circuits. Aim This review aims to summarize and discuss the recent technical advances in multiphoton imaging of hippocampal neural circuits and the accumulated biological knowledge gained through this technology. Approach First, we provide a brief overview of various techniques of multiphoton imaging of the hippocampus and discuss its advantages, drawbacks, and associated key innovations and practices. Then, we review a large body of findings obtained through multiphoton imaging by region (CA1 and dentate gyrus), cell type (pyramidal neurons, inhibitory interneurons, and glial cells), and cellular compartment (dendrite and axon). Results Multiphoton imaging of the hippocampus is primarily performed under head-fixed conditions and can reveal detailed mechanisms of circuit operation owing to its high spatial resolution and specificity. As the hippocampus lies deep below the cortex, its imaging requires elaborate methods. These include imaging cannula implantation, microendoscopy, and the use of long-wavelength light sources. Although many studies have focused on the dorsal CA1 pyramidal cells, studies of other local and inter-areal circuitry elements have also helped provide a more comprehensive picture of the information processing performed by the hippocampal circuits. Imaging of circuit function in mouse models of Alzheimer's disease and other brain disorders such as autism spectrum disorder has also contributed greatly to our understanding of their pathophysiology. Conclusions Multiphoton imaging has revealed much regarding region-, cell-type-, and pathway-specific mechanisms in hippocampal function and dysfunction in health and disease. Future technological advances will allow further illustration of the operating principle of the hippocampal circuits via the large-scale, high-resolution, multimodal, and minimally invasive imaging.
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Affiliation(s)
- Kotaro Mizuta
- RIKEN BDR, Kobe, Japan
- New York University Abu Dhabi, Department of Biology, Abu Dhabi, United Arab Emirates
| | - Masaaki Sato
- Hokkaido University Graduate School of Medicine, Department of Neuropharmacology, Sapporo, Japan
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14
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Puhger K, Crestani AP, Diniz CRF, Wiltgen BJ. The hippocampus contributes to retroactive stimulus associations during trace fear conditioning. iScience 2024; 27:109035. [PMID: 38375237 PMCID: PMC10875141 DOI: 10.1016/j.isci.2024.109035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 12/04/2023] [Accepted: 01/23/2024] [Indexed: 02/21/2024] Open
Abstract
Binding events that occur at different times are essential for memory formation. In trace fear conditioning, animals associate a tone and footshock despite no temporal overlap. The hippocampus is thought to mediate this learning by maintaining a memory of the tone until shock occurrence, however, evidence for sustained hippocampal tone representations is lacking. Here, we demonstrate a retrospective role for the hippocampus in trace fear conditioning. Bulk calcium imaging revealed sustained increases in CA1 activity after footshock that were not observed after tone termination. Optogenetic silencing of CA1 immediately after footshock impaired subsequent memory. Additionally, footshock increased the number of sharp-wave ripples compared to baseline during conditioning. Therefore, post-shock hippocampal activity likely supports learning by reactivating and linking latent tone and shock representations. These findings highlight an underappreciated function of post-trial hippocampal activity in enabling retroactive temporal associations during new learning, as opposed to persistent maintenance of stimulus representations.
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Affiliation(s)
- Kyle Puhger
- Department of Psychology, University of California, Davis, 135 Young Hall, 1 Shields Avenue, Davis, CA 95616, USA
- Center for Neuroscience, University of California, Davis, 1544 Newton Court, Davis, CA 95618, USA
| | - Ana P. Crestani
- Center for Neuroscience, University of California, Davis, 1544 Newton Court, Davis, CA 95618, USA
| | - Cassiano R.A. F. Diniz
- Center for Neuroscience, University of California, Davis, 1544 Newton Court, Davis, CA 95618, USA
| | - Brian J. Wiltgen
- Department of Psychology, University of California, Davis, 135 Young Hall, 1 Shields Avenue, Davis, CA 95616, USA
- Center for Neuroscience, University of California, Davis, 1544 Newton Court, Davis, CA 95618, USA
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15
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Hulsey D, Zumwalt K, Mazzucato L, McCormick DA, Jaramillo S. Decision-making dynamics are predicted by arousal and uninstructed movements. Cell Rep 2024; 43:113709. [PMID: 38280196 PMCID: PMC11016285 DOI: 10.1016/j.celrep.2024.113709] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Revised: 10/05/2023] [Accepted: 01/10/2024] [Indexed: 01/29/2024] Open
Abstract
During sensory-guided behavior, an animal's decision-making dynamics unfold through sequences of distinct performance states, even while stimulus-reward contingencies remain static. Little is known about the factors that underlie these changes in task performance. We hypothesize that these decision-making dynamics can be predicted by externally observable measures, such as uninstructed movements and changes in arousal. Here, using computational modeling of visual and auditory task performance data from mice, we uncovered lawful relationships between transitions in strategic task performance states and an animal's arousal and uninstructed movements. Using hidden Markov models applied to behavioral choices during sensory discrimination tasks, we find that animals fluctuate between minutes-long optimal, sub-optimal, and disengaged performance states. Optimal state epochs are predicted by intermediate levels, and reduced variability, of pupil diameter and movement. Our results demonstrate that externally observable uninstructed behaviors can predict optimal performance states and suggest that mice regulate their arousal during optimal performance.
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Affiliation(s)
- Daniel Hulsey
- Institute of Neuroscience, University of Oregon, Eugene, OR 97405, USA
| | - Kevin Zumwalt
- Institute of Neuroscience, University of Oregon, Eugene, OR 97405, USA
| | - Luca Mazzucato
- Institute of Neuroscience, University of Oregon, Eugene, OR 97405, USA; Department of Biology, University of Oregon, Eugene, OR 97405, USA; Departments of Physics and Mathematics, University of Oregon, Eugene, OR 97405, USA.
| | - David A McCormick
- Institute of Neuroscience, University of Oregon, Eugene, OR 97405, USA; Department of Biology, University of Oregon, Eugene, OR 97405, USA.
| | - Santiago Jaramillo
- Institute of Neuroscience, University of Oregon, Eugene, OR 97405, USA; Department of Biology, University of Oregon, Eugene, OR 97405, USA.
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16
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Xia F, Fascianelli V, Vishwakarma N, Ghinger FG, Fusi S, Kheirbek MA. Identifying and modulating neural signatures of stress susceptibility and resilience enables control of anhedonia. RESEARCH SQUARE 2024:rs.3.rs-3581329. [PMID: 38343839 PMCID: PMC10854313 DOI: 10.21203/rs.3.rs-3581329/v1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/20/2024]
Abstract
Anhedonia is a core aspect of major depressive disorder. Traditionally viewed as a blunted emotional state in which individuals are unable to experience joy, anhedonia also diminishes the drive to seek rewards and the ability to value and learn about them 1-4.The neural underpinnings of anhedonia and how this emotional state drives related behavioral changes remain unclear. Here, we investigated these questions by taking advantage of the fact that when mice are exposed to traumatic social stress, susceptible animals become socially withdrawn and anhedonic, where they cease to seek high-value rewards, while others remain resilient. By performing high density electrophysiological recordings and comparing neural activity patterns of these groups in the basolateral amygdala (BLA) and ventral CA1 (vCA1) of awake behaving animals, we identified neural signatures of susceptibility and resilience to anhedonia. When animals actively sought rewards, BLA activity in resilient mice showed stronger discrimination between upcoming reward choices. In contrast, susceptible mice displayed a rumination-like signature, where BLA neurons encoded the intention to switch or stay on a previously chosen reward. When animals were at rest, the spontaneous BLA activity of susceptible mice was higher dimensional than in controls, reflecting a greater number of distinct neural population states. Notably, this spontaneous activity allowed us to decode group identity and to infer if a mouse had a history of stress better than behavioral outcomes alone. Finally, targeted manipulation of vCA1 inputs to the BLA in susceptible mice rescued dysfunctional neural dynamics, amplified dynamics associated with resilience, and reversed their anhedonic behavior. This work reveals population-level neural signatures that explain individual differences in responses to traumatic stress, and suggests that modulating vCA1-BLA inputs can enhance resilience by regulating these dynamics.
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Affiliation(s)
- Frances Xia
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, USA
| | - Valeria Fascianelli
- Center for Theoretical Neuroscience, Columbia University, NY, USA
- Zuckerman Mind Brain Behavior Institute, Columbia University, NY, USA
| | - Nina Vishwakarma
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, USA
| | - Frances Grace Ghinger
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, USA
| | - Stefano Fusi
- Center for Theoretical Neuroscience, Columbia University, NY, USA
- Zuckerman Mind Brain Behavior Institute, Columbia University, NY, USA
- Department of Neuroscience, Vagelos College of Physicians and Surgeons, Columbia University Irving Medical Center, NY, USA
- Kavli Institute for Brain Science, Columbia University Irving Medical Center, NY, USA
| | - Mazen A Kheirbek
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, USA
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, USA
- Kavli Institute for Fundamental Neuroscience, University of California, San Francisco, San Francisco, USA
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, USA
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17
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Balcı F, Simen P. Neurocomputational Models of Interval Timing: Seeing the Forest for the Trees. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2024; 1455:51-78. [PMID: 38918346 DOI: 10.1007/978-3-031-60183-5_4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
Abstract
Extracting temporal regularities and relations from experience/observation is critical for organisms' adaptiveness (communication, foraging, predation, prediction) in their ecological niches. Therefore, it is not surprising that the internal clock that enables the perception of seconds-to-minutes-long intervals (interval timing) is evolutionarily well-preserved across many species of animals. This comparative claim is primarily supported by the fact that the timing behavior of many vertebrates exhibits common statistical signatures (e.g., on-average accuracy, scalar variability, positive skew). These ubiquitous statistical features of timing behaviors serve as empirical benchmarks for modelers in their efforts to unravel the processing dynamics of the internal clock (namely answering how internal clock "ticks"). In this chapter, we introduce prominent (neuro)computational approaches to modeling interval timing at a level that can be understood by general audience. These models include Treisman's pacemaker accumulator model, the information processing variant of scalar expectancy theory, the striatal beat frequency model, behavioral expectancy theory, the learning to time model, the time-adaptive opponent Poisson drift-diffusion model, time cell models, and neural trajectory models. Crucially, we discuss these models within an overarching conceptual framework that categorizes different models as threshold vs. clock-adaptive models and as dedicated clock/ramping vs. emergent time/population code models.
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Affiliation(s)
- Fuat Balcı
- Department of Biological Sciences, University of Manitoba, Winnipeg, MB, Canada.
| | - Patrick Simen
- Department of Neuroscience, Oberlin College, Oberlin, OH, USA
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18
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Santos TB, Kramer-Soares JC, Coelho CAO, Oliveira MGM. Temporal association activates projections from the perirhinal cortex and ventral CA1 to the prelimbic cortex and from the prelimbic cortex to the basolateral amygdala. Cereb Cortex 2023; 33:11456-11470. [PMID: 37823340 DOI: 10.1093/cercor/bhad375] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 09/22/2023] [Accepted: 09/22/2023] [Indexed: 10/13/2023] Open
Abstract
In trace fear conditioning, the prelimbic cortex exhibits persistent activity during the interval between the conditioned and unconditioned stimuli, which maintains a conditioned stimulus representation. Regions cooperating for this function or encoding the conditioned stimulus before the interval could send inputs to the prelimbic cortex, supporting learning. The basolateral amygdala has conditioned stimulus- and unconditioned stimulus-responsive neurons, convergently activated. The prelimbic cortex could directly project to the basolateral amygdala to associate the transient memory of the conditioned stimulus with the unconditioned stimulus. We investigated the neuronal circuit supporting temporal associations using contextual fear conditioning with a 5-s interval, in which 5 s separates the contextual conditioned stimulus from the unconditioned stimulus. Injecting retrobeads, we quantified c-Fos in prelimbic cortex- or basolateral amygdala-projecting neurons from 9 regions after contextual fear conditioning with a 5-s interval or contextual fear conditioning, in which the conditioned and unconditioned stimuli overlap. The contextual fear conditioning with a 5-s interval activated ventral CA1 and perirhinal cortex neurons projecting to the prelimbic cortex and prelimbic cortex neurons projecting to basolateral amygdala. Both fear conditioning activated ventral CA1 and lateral entorhinal cortex neurons projecting to basolateral amygdala and basolateral amygdala neurons projecting to prelimbic cortex. The perirhinal cortex → prelimbic cortex and ventral CA1 → prelimbic cortex connections are the first identified prelimbic cortex afferent projections participating in temporal associations. These results help to understand time-linked memories, a process required in episodic and working memories.
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Affiliation(s)
- Thays B Santos
- Departamento de Psicobiologia, Universidade Federal de São Paulo-UNIFESP, São Paulo 04023-062, Brazil
| | - Juliana C Kramer-Soares
- Departamento de Psicobiologia, Universidade Federal de São Paulo-UNIFESP, São Paulo 04023-062, Brazil
- Universidade Cruzeiro do Sul-UNICSUL, São Paulo 08060-070, Brazil
| | - Cesar A O Coelho
- Neuroscience and Mental Health, Hospital for Sick Children, Toronto, ON M5G 0A4, Canada
| | - Maria G M Oliveira
- Departamento de Psicobiologia, Universidade Federal de São Paulo-UNIFESP, São Paulo 04023-062, Brazil
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19
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Xia F, Fascianelli V, Vishwakarma N, Ghinger FG, Fusi S, Kheirbek MA. Neural signatures of stress susceptibility and resilience in the amygdala-hippocampal network. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.10.23.563652. [PMID: 37961124 PMCID: PMC10634760 DOI: 10.1101/2023.10.23.563652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2023]
Abstract
The neural dynamics that underlie divergent anhedonic responses to stress remain unclear. Here, we identified neuronal dynamics in an amygdala-hippocampal circuit that distinguish stress resilience and susceptibility. In a reward-choice task, basolateral amygdala (BLA) activity in resilient mice showed enhanced discrimination of upcoming reward choices. In contrast, a rumination-like signature emerged in the BLA of susceptible mice; a linear decoder could classify the intention to switch or stay on a previously chosen reward. Spontaneous activity in the BLA of susceptible mice was higher dimensional than controls, reflecting the exploration of a larger number of distinct neural states. Manipulation of vCA1-BLA inputs rescued dysfunctional neural dynamics and anhedonia in susceptible mice, suggesting that targeting this pathway can enhance BLA circuit function and ameliorate of depression-related behaviors.
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Affiliation(s)
- Frances Xia
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, USA
| | - Valeria Fascianelli
- Center for Theoretical Neuroscience, Columbia University, NY, USA
- Zuckerman Mind Brain Behavior Institute, Columbia University, NY, USA
| | - Nina Vishwakarma
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, USA
| | - Frances Grace Ghinger
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, USA
| | - Stefano Fusi
- Center for Theoretical Neuroscience, Columbia University, NY, USA
- Zuckerman Mind Brain Behavior Institute, Columbia University, NY, USA
- Department of Neuroscience, Vagelos College of Physicians and Surgeons, Columbia University Irving Medical Center, NY, USA
- Kavli Institute for Brain Science, Columbia University Irving Medical Center, NY, USA
| | - Mazen A Kheirbek
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, USA
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, USA
- Kavli Institute for Brain Science, Columbia University Irving Medical Center, NY, USA
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, USA
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20
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Bai T, Zhan L, Zhang N, Lin F, Saur D, Xu C. Learning-prolonged maintenance of stimulus information in CA1 and subiculum during trace fear conditioning. Cell Rep 2023; 42:112853. [PMID: 37481720 DOI: 10.1016/j.celrep.2023.112853] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Revised: 04/12/2023] [Accepted: 07/08/2023] [Indexed: 07/25/2023] Open
Abstract
Temporal associative learning binds discontiguous conditional stimuli (CSs) and unconditional stimuli (USs), possibly by maintaining CS information in the hippocampus after its offset. Yet, how learning regulates such maintenance of CS information in hippocampal circuits remains largely unclear. Using the auditory trace fear conditioning (TFC) paradigm, we identify a projection from the CA1 to the subiculum critical for TFC. Deep-brain calcium imaging shows that the peak of trace activity in the CA1 and subiculum is extended toward the US and that the CS representation during the trace period is enhanced during learning. Interestingly, such plasticity is consolidated only in the CA1, not the subiculum, after training. Moreover, CA1 neurons, but not subiculum neurons, increasingly become active during CS-and-trace and shock periods, respectively, and correlate with CS-evoked fear retrieval afterward. These results indicate that learning dynamically enhances stimulus information maintenance in the CA1-subiculum circuit during learning while storing CS and US memories primarily in the CA1 area.
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Affiliation(s)
- Tao Bai
- Institute of Neuroscience, State Key Laboratory of Neuroscience, Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China; University of the Chinese Academy of Sciences, Beijing 100049, China
| | - Lijie Zhan
- Institute of Neuroscience, State Key Laboratory of Neuroscience, Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China
| | - Na Zhang
- Institute of Neuroscience, State Key Laboratory of Neuroscience, Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China
| | - Feikai Lin
- Institute of Neuroscience, State Key Laboratory of Neuroscience, Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China
| | - Dieter Saur
- Department of Internal Medicine 2, Technische Universität München, Ismaningerstrasse 22, 81675 Munich, Germany
| | - Chun Xu
- Institute of Neuroscience, State Key Laboratory of Neuroscience, Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China; University of the Chinese Academy of Sciences, Beijing 100049, China; Shanghai Center for Brain Science and Brain-Inspired Technology, Shanghai 201210, China.
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21
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Osanai H, Nair IR, Kitamura T. Dissecting cell-type-specific pathways in medial entorhinal cortical-hippocampal network for episodic memory. J Neurochem 2023; 166:172-188. [PMID: 37248771 PMCID: PMC10538947 DOI: 10.1111/jnc.15850] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Revised: 05/07/2023] [Accepted: 05/10/2023] [Indexed: 05/31/2023]
Abstract
Episodic memory, which refers to our ability to encode and recall past events, is essential to our daily lives. Previous research has established that both the entorhinal cortex (EC) and hippocampus (HPC) play a crucial role in the formation and retrieval of episodic memories. However, to understand neural circuit mechanisms behind these processes, it has become necessary to monitor and manipulate the neural activity in a cell-type-specific manner with high temporal precision during memory formation, consolidation, and retrieval in the EC-HPC networks. Recent studies using cell-type-specific labeling, monitoring, and manipulation have demonstrated that medial EC (MEC) contains multiple excitatory neurons that have differential molecular markers, physiological properties, and anatomical features. In this review, we will comprehensively examine the complementary roles of superficial layers of neurons (II and III) and the roles of deeper layers (V and VI) in episodic memory formation and recall based on these recent findings.
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Affiliation(s)
- Hisayuki Osanai
- Department of Psychiatry, University of Texas Southwestern Medical Center, Dallas, Texas, USA
| | - Indrajith R Nair
- Department of Psychiatry, University of Texas Southwestern Medical Center, Dallas, Texas, USA
| | - Takashi Kitamura
- Department of Psychiatry, University of Texas Southwestern Medical Center, Dallas, Texas, USA
- Department of Neuroscience, University of Texas Southwestern Medical Center, Dallas, Texas, USA
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22
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Radostova D, Kuncicka D, Krajcovic B, Hejtmanek L, Petrasek T, Svoboda J, Stuchlik A, Brozka H. Incidental temporal binding in rats: A novel behavioral task. PLoS One 2023; 18:e0274437. [PMID: 37347773 PMCID: PMC10286974 DOI: 10.1371/journal.pone.0274437] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2022] [Accepted: 06/01/2023] [Indexed: 06/24/2023] Open
Abstract
We designed a behavioral task called One-Trial Trace Escape Reaction (OTTER), in which rats incidentally associate two temporally discontinuous stimuli: a neutral acoustic cue (CS) with an aversive stimulus (US) which occurs two seconds later (CS-2s-US sequence). Rats are first habituated to two similar environmental contexts (A and B), each consisting of an interconnected dark and light chamber. Next, rats experience the CS-2s-US sequence in the dark chamber of one of the contexts (either A or B); the US is terminated immediately after a rat escapes into the light chamber. The CS-2s-US sequence is presented only once to ensure the incidental acquisition of the association. The recall is tested 24 h later when rats are presented with only the CS in the alternate context (B or A), and their behavioral response is observed. Our results show that 59% of the rats responded to the CS by escaping to the light chamber, although they experienced only one CS-2s-US pairing. The OTTER task offers a flexible high throughput tool to study memory acquired incidentally after a single experience. Incidental one-trial acquisition of association between temporally discontinuous events may be one of the essential components of episodic memory formation.
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Affiliation(s)
- Dominika Radostova
- Institute of Physiology, Czech Academy of Sciences, Prague, Czechia
- Second Faculty of Medicine, Charles University, Prague, Czechia
| | - Daniela Kuncicka
- Institute of Physiology, Czech Academy of Sciences, Prague, Czechia
- Second Faculty of Medicine, Charles University, Prague, Czechia
| | - Branislav Krajcovic
- Institute of Physiology, Czech Academy of Sciences, Prague, Czechia
- Third Faculty of Medicine, Charles University, Prague, Czechia
| | - Lukas Hejtmanek
- Institute of Physiology, Czech Academy of Sciences, Prague, Czechia
| | - Tomas Petrasek
- Institute of Physiology, Czech Academy of Sciences, Prague, Czechia
- National Institute of Mental Health, Klecany, Czechia
| | - Jan Svoboda
- Institute of Physiology, Czech Academy of Sciences, Prague, Czechia
| | - Ales Stuchlik
- Institute of Physiology, Czech Academy of Sciences, Prague, Czechia
| | - Hana Brozka
- Institute of Physiology, Czech Academy of Sciences, Prague, Czechia
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23
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Biane JS, Ladow MA, Stefanini F, Boddu SP, Fan A, Hassan S, Dundar N, Apodaca-Montano DL, Zhou LZ, Fayner V, Woods NI, Kheirbek MA. Neural dynamics underlying associative learning in the dorsal and ventral hippocampus. Nat Neurosci 2023; 26:798-809. [PMID: 37012382 PMCID: PMC10448873 DOI: 10.1038/s41593-023-01296-6] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Accepted: 03/07/2023] [Indexed: 04/05/2023]
Abstract
Animals associate cues with outcomes and update these associations as new information is presented. This requires the hippocampus, yet how hippocampal neurons track changes in cue-outcome associations remains unclear. Using two-photon calcium imaging, we tracked the same dCA1 and vCA1 neurons across days to determine how responses evolve across phases of odor-outcome learning. Initially, odors elicited robust responses in dCA1, whereas, in vCA1, odor responses primarily emerged after learning and embedded information about the paired outcome. Population activity in both regions rapidly reorganized with learning and then stabilized, storing learned odor representations for days, even after extinction or pairing with a different outcome. Additionally, we found stable, robust signals across CA1 when mice anticipated outcomes under behavioral control but not when mice anticipated an inescapable aversive outcome. These results show how the hippocampus encodes, stores and updates learned associations and illuminates the unique contributions of dorsal and ventral hippocampus.
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Affiliation(s)
- Jeremy S Biane
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA.
| | - Max A Ladow
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
| | - Fabio Stefanini
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Department of Neuroscience, Columbia University, New York, NY, USA
| | - Sayi P Boddu
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Austin Fan
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Shazreh Hassan
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Naz Dundar
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
| | - Daniel L Apodaca-Montano
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Lexi Zichen Zhou
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Varya Fayner
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA
| | - Nicholas I Woods
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
| | - Mazen A Kheirbek
- Department of Psychiatry and Behavioral Sciences, University of California, San Francisco, San Francisco, CA, USA.
- Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA.
- Kavli Institute for Fundamental Neuroscience, University of California, San Francisco, San Francisco, CA, USA.
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA, USA.
- Center for Integrative Neuroscience, University of California, San Francisco, San Francisco, CA, USA.
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24
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Hulsey D, Zumwalt K, Mazzucato L, McCormick DA, Jaramillo S. Decision-making dynamics are predicted by arousal and uninstructed movements. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.03.02.530651. [PMID: 37034793 PMCID: PMC10081205 DOI: 10.1101/2023.03.02.530651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
During sensory-guided behavior, an animal's decision-making dynamics unfold through sequences of distinct performance states, even while stimulus-reward contingencies remain static. Little is known about the factors that underlie these changes in task performance. We hypothesize that these decision-making dynamics can be predicted by externally observable measures, such as uninstructed movements and changes in arousal. Here, combining behavioral experiments in mice with computational modeling, we uncovered lawful relationships between transitions in strategic task performance states and an animal's arousal and uninstructed movements. Using hidden Markov models applied to behavioral choices during sensory discrimination tasks, we found that animals fluctuate between minutes-long optimal, sub-optimal and disengaged performance states. Optimal state epochs were predicted by intermediate levels, and reduced variability, of pupil diameter, along with reduced variability in face movements and locomotion. Our results demonstrate that externally observable uninstructed behaviors can predict optimal performance states, and suggest mice regulate their arousal during optimal performance.
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Affiliation(s)
- Daniel Hulsey
- Institute of Neuroscience, University of Oregon, Eugene, OR, USA
| | - Kevin Zumwalt
- Institute of Neuroscience, University of Oregon, Eugene, OR, USA
| | - Luca Mazzucato
- Institute of Neuroscience, University of Oregon, Eugene, OR, USA
- Department of Biology, University of Oregon, Eugene, OR, USA
- Departments of Physics and Mathematics, University of Oregon, Eugene, OR, USA
| | - David A. McCormick
- Institute of Neuroscience, University of Oregon, Eugene, OR, USA
- Department of Biology, University of Oregon, Eugene, OR, USA
| | - Santiago Jaramillo
- Institute of Neuroscience, University of Oregon, Eugene, OR, USA
- Department of Biology, University of Oregon, Eugene, OR, USA
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25
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Ananthamurthy KG, Bhalla US. Synthetic Data Resource and Benchmarks for Time Cell Analysis and Detection Algorithms. eNeuro 2023; 10:ENEURO.0007-22.2023. [PMID: 36823166 PMCID: PMC10027052 DOI: 10.1523/eneuro.0007-22.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2022] [Revised: 11/21/2022] [Accepted: 02/09/2023] [Indexed: 02/25/2023] Open
Abstract
Hippocampal CA1 cells take part in reliable, time-locked activity sequences in tasks that involve an association between temporally separated stimuli, in a manner that tiles the interval between the stimuli. Such cells have been termed time cells. Here, we adopt a first-principles approach to comparing diverse analysis and detection algorithms for identifying time cells. We generated synthetic activity datasets using calcium signals recorded in vivo from the mouse hippocampus using two-photon (2-P) imaging, as template response waveforms. We assigned known, ground truth values to perturbations applied to perfect activity signals, including noise, calcium event width, timing imprecision, hit trial ratio and background (untuned) activity. We tested a range of published and new algorithms and their variants on this dataset. We find that most algorithms correctly classify over 80% of cells, but have different balances between true and false positives, and different sensitivity to the five categories of perturbation. Reassuringly, most methods are reasonably robust to perturbations, including background activity, and show good concordance in classification of time cells. The same algorithms were also used to analyze and identify time cells in experimental physiology datasets recorded in vivo and most show good concordance.
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Affiliation(s)
- Kambadur G Ananthamurthy
- National Centre for Biological Sciences - Tata Institute of Fundamental Research, Bellary Road, Bengaluru - 560065, Karnataka, India
| | - Upinder S Bhalla
- National Centre for Biological Sciences - Tata Institute of Fundamental Research, Bellary Road, Bengaluru - 560065, Karnataka, India
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26
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Déli É, Peters JF, Kisvárday Z. How the Brain Becomes the Mind: Can Thermodynamics Explain the Emergence and Nature of Emotions? ENTROPY (BASEL, SWITZERLAND) 2022; 24:1498. [PMID: 37420518 PMCID: PMC9601684 DOI: 10.3390/e24101498] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 10/07/2022] [Accepted: 10/11/2022] [Indexed: 07/09/2023]
Abstract
The neural systems' electric activities are fundamental for the phenomenology of consciousness. Sensory perception triggers an information/energy exchange with the environment, but the brain's recurrent activations maintain a resting state with constant parameters. Therefore, perception forms a closed thermodynamic cycle. In physics, the Carnot engine is an ideal thermodynamic cycle that converts heat from a hot reservoir into work, or inversely, requires work to transfer heat from a low- to a high-temperature reservoir (the reversed Carnot cycle). We analyze the high entropy brain by the endothermic reversed Carnot cycle. Its irreversible activations provide temporal directionality for future orientation. A flexible transfer between neural states inspires openness and creativity. In contrast, the low entropy resting state parallels reversible activations, which impose past focus via repetitive thinking, remorse, and regret. The exothermic Carnot cycle degrades mental energy. Therefore, the brain's energy/information balance formulates motivation, sensed as position or negative emotions. Our work provides an analytical perspective of positive and negative emotions and spontaneous behavior from the free energy principle. Furthermore, electrical activities, thoughts, and beliefs lend themselves to a temporal organization, an orthogonal condition to physical systems. Here, we suggest that an experimental validation of the thermodynamic origin of emotions might inspire better treatment options for mental diseases.
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Affiliation(s)
- Éva Déli
- Department of Anatomy, Histology, and Embryology, University of Debrecen, 4032 Debrecen, Hungary
| | - James F. Peters
- Department of Electrical & Computer Engineering, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
- Department of Mathematics, Adiyaman University, Adiyaman 02040, Turkey
| | - Zoltán Kisvárday
- Department of Anatomy, Histology, and Embryology, University of Debrecen, 4032 Debrecen, Hungary
- ELKH Neuroscience Research Group, University of Debrecen, 4032 Debrecen, Hungary
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27
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Liu X, Terada S, Ramezani M, Kim JH, Lu Y, Grosmark A, Losonczy A, Kuzum D. E-Cannula reveals anatomical diversity in sharp-wave ripples as a driver for the recruitment of distinct hippocampal assemblies. Cell Rep 2022; 41:111453. [PMID: 36198271 PMCID: PMC9640218 DOI: 10.1016/j.celrep.2022.111453] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Revised: 07/07/2022] [Accepted: 09/14/2022] [Indexed: 11/17/2022] Open
Abstract
The hippocampus plays a critical role in spatial navigation and episodic memory. However, research on in vivo hippocampal activity dynamics mostly relies on single modalities, such as electrical recordings or optical imaging, with respectively limited spatial and temporal resolution. Here, we develop the E-Cannula, integrating fully transparent graphene microelectrodes with imaging cannula, which enables simultaneous electrical recording and two-photon calcium imaging from the exact same neural populations across an anatomically extended region of the mouse hippocampal CA1 stably across several days. The large-scale multimodal recordings show that sharp wave ripples (SWRs) exhibit spatiotemporal wave patterns along multiple axes in two-dimensional (2D) space with different spatial extents and temporal propagation modes. Notably, distinct SWR wave patterns are associated with the selective recruitment of orthogonal CA1 cell assemblies. These results demonstrate the utility of the E-Cannula as a versatile neurotechnology with the potential for future integration with other optical components.
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Affiliation(s)
- Xin Liu
- Department of Electrical and Computer Engineering, University of California, San Diego, La Jolla, CA, USA
| | - Satoshi Terada
- Department of Neuroscience, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Mehrdad Ramezani
- Department of Electrical and Computer Engineering, University of California, San Diego, La Jolla, CA, USA
| | - Jeong-Hoon Kim
- Department of Electrical and Computer Engineering, University of California, San Diego, La Jolla, CA, USA
| | - Yichen Lu
- Department of Electrical and Computer Engineering, University of California, San Diego, La Jolla, CA, USA
| | - Andres Grosmark
- Department of Neuroscience, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA; The Kavli Institute for Brain Science, Columbia University, New York, NY, USA
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA; The Kavli Institute for Brain Science, Columbia University, New York, NY, USA.
| | - Duygu Kuzum
- Department of Electrical and Computer Engineering, University of California, San Diego, La Jolla, CA, USA; Halıcıoğlu Data Science Institute, University of California, San Diego, La Jolla, CA, USA.
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28
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Rabinovich RJ, Kato DD, Bruno RM. Learning enhances encoding of time and temporal surprise in mouse primary sensory cortex. Nat Commun 2022; 13:5504. [PMID: 36127340 PMCID: PMC9489862 DOI: 10.1038/s41467-022-33141-y] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Accepted: 09/02/2022] [Indexed: 11/09/2022] Open
Abstract
Primary sensory cortex has long been believed to play a straightforward role in the initial processing of sensory information. Yet, the superficial layers of cortex overall are sparsely active, even during sensory stimulation; additionally, cortical activity is influenced by other modalities, task context, reward, and behavioral state. Our study demonstrates that reinforcement learning dramatically alters representations among longitudinally imaged neurons in superficial layers of mouse primary somatosensory cortex. Learning an object detection task recruits previously unresponsive neurons, enlarging the neuronal population sensitive to touch and behavioral choice. Cortical responses decrease upon repeated stimulus presentation outside of the behavioral task. Moreover, training improves population encoding of the passage of time, and unexpected deviations in trial timing elicit even stronger responses than touches do. In conclusion, the superficial layers of sensory cortex exhibit a high degree of learning-dependent plasticity and are strongly modulated by non-sensory but behaviorally-relevant features, such as timing and surprise. Activity in the superficial layers of the sensory cortex is believed to be largely driven by incoming sensory stimuli. Here the authors demonstrate how learning changes neural responses to sensations according to both behavioral relevance and timing, suggesting a high degree of non-sensory modulation.
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Affiliation(s)
- Rebecca J Rabinovich
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA.,Kavli Institute for Brain Science, Columbia University, New York, NY, 10027, USA.,Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, 10027, USA
| | - Daniel D Kato
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA.,Kavli Institute for Brain Science, Columbia University, New York, NY, 10027, USA.,Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, 10027, USA
| | - Randy M Bruno
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA. .,Kavli Institute for Brain Science, Columbia University, New York, NY, 10027, USA. .,Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, 10027, USA. .,Department of Physiology, Anatomy & Genetics, University of Oxford, Oxford, UK.
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29
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Tarawneh HY, Jayakody DM, Sohrabi HR, Martins RN, Mulders WH. Understanding the Relationship Between Age-Related Hearing Loss and Alzheimer’s Disease: A Narrative Review. J Alzheimers Dis Rep 2022; 6:539-556. [PMID: 36275417 PMCID: PMC9535607 DOI: 10.3233/adr-220035] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2022] [Accepted: 08/16/2022] [Indexed: 12/02/2022] Open
Abstract
Evidence suggests that hearing loss (HL), even at mild levels, increases the long-term risk of cognitive decline and incident dementia. Hearing loss is one of the modifiable risk factors for dementia, with approximately 4 million of the 50 million cases of dementia worldwide possibly attributed to untreated HL. This paper describes four possible mechanisms that have been suggested for the relationship between age-related hearing loss (ARHL) and Alzheimer’s disease (AD), which is the most common form of dementia. The first mechanism suggests mitochondrial dysfunction and altered signal pathways due to aging as a possible link between ARHL and AD. The second mechanism proposes that sensory degradation in hearing impaired people could explain the relationship between ARHL and AD. The occupation of cognitive resource (third) mechanism indicates that the association between ARHL and AD is a result of increased cognitive processing that is required to compensate for the degraded sensory input. The fourth mechanism is an expansion of the third mechanism, i.e., the function and structure interaction involves both cognitive resource occupation (neural activity) and AD pathology as the link between ARHL and AD. Exploring the specific mechanisms that provide the link between ARHL and AD has the potential to lead to innovative ideas for the diagnosis, prevention, and/or treatment of AD. This paper also provides insight into the current evidence for the use of hearing treatments as a possible treatment/prevention for AD, and if auditory assessments could provide an avenue for early detection of cognitive impairment associated with AD.
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Affiliation(s)
- Hadeel Y. Tarawneh
- School of Human Sciences, The University of Western Australia, Crawley, WA, Australia
- Ear Science Institute Australia, Subiaco, WA, Australia
| | - Dona M.P. Jayakody
- Ear Science Institute Australia, Subiaco, WA, Australia
- Centre of Ear Science, Medical School, The University of Western Australia, Crawley, WA, Australia
| | - Hamid R. Sohrabi
- Centre for Healthy Ageing, College of Science, Health, Engineering and Education, Murdoch University, WA, Australia
- School of Medical and Health Sciences, Edith Cowan University, Joondalup, WA, Australia
- Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, Macquarie University, NSW, Australia
| | - Ralph N. Martins
- School of Medical and Health Sciences, Edith Cowan University, Joondalup, WA, Australia
- Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, Macquarie University, NSW, Australia
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30
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Zeltser G, Sukhanov IM, Nevorotin AJ. MMM - The molecular model of memory. J Theor Biol 2022; 549:111219. [PMID: 35810778 DOI: 10.1016/j.jtbi.2022.111219] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2021] [Revised: 07/01/2022] [Accepted: 07/04/2022] [Indexed: 11/17/2022]
Abstract
Identifying mechanisms underlying neurons ability to process information including acquisition, storage, and retrieval plays an important role in the understanding of the different types of memory, pathogenesis of many neurological diseases affecting memory and therapeutic target discovery. However, the traditional understanding of the mechanisms of memory associated with the electrical signals having a unique combination of frequency and amplitude does not answer the question how the memories can survive for life-long periods of time, while exposed to synaptic noise. Recent evidence suggests that, apart from neuronal circuits, a diversity of the molecular memory (MM) carriers, are essential for memory performance. The molecular model of memory (MMM) is proposed, according to which each item of incoming information (the elementary memory item - eMI) is encoded by both circuitries, with the unique for a given MI electrical parameters, and also the MM carriers, unique by its molecular composition. While operating as the carriers of incoming information, the MMs, are functioning within the neuron plasma membrane. Inactive (latent) initially, during acquisition each of the eMIs is activated to become a virtual copy of some real fact or events bygone. This activation is accompanied by the considerable remodeling of the MM molecule associated with the resonance effect.
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Affiliation(s)
| | - Ilya M Sukhanov
- Lab. Behavioral Pharmacology, Dept. Psychopharmacology, Valdman Institute of Pharmacology, I.P. Pavlov Medical University, Leo Tolstoi Street 6/8, St. Petersburg 197022, The Russian Federation
| | - Alexey J Nevorotin
- Laboratory of Electron Microscopy, I.P. Pavlov Medical University, Leo Tolstoi Street 6/8, St. Petersburg 197022, The Russian Federation
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31
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Zhang WJ, Li DN, Lian TH, Guo P, Zhang YN, Li JH, Guan HY, He MY, Zhang WJ, Zhang WJ, Luo DM, Wang XM, Zhang W. Clinical Features and Potential Mechanisms Relating Neuropathological Biomarkers and Blood-Brain Barrier in Patients With Alzheimer’s Disease and Hearing Loss. Front Aging Neurosci 2022; 14:911028. [PMID: 35783139 PMCID: PMC9245454 DOI: 10.3389/fnagi.2022.911028] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 05/05/2022] [Indexed: 11/24/2022] Open
Abstract
Background The aim of this study was to explore clinical features and potential mechanisms relating neuropathological biomarkers and blood-brain barrier (BBB) in Alzheimer’s disease (AD) and hearing loss (HL). Materials and Methods A total of 65 patients with AD were recruited and auditory function was assessed by threshold of pure tone audiometry (PTA). Patients were divided into AD with HL (AD-HL) and AD with no HL (AD-nHL) groups based on the standard of World Health Organization. Clinical symptoms were assessed by multiple rating scales. The levels of neuropathological biomarkers of β amyloid1-42 (Aβ1–42) and multiple phosphorylated tau (P-tau), and BBB factors of matrix metalloproteinases (MMPs), receptor of advanced glycation end products, glial fibrillary acidic protein, and low-density lipoprotein receptor related protein 1 were measured. Results (1) Compared with AD-nHL group, AD-HL group had significantly impaired overall cognitive function and cognitive domains of memory, language, attention, execution, and activities of daily living (ADL) reflected by the scores of rating scales (P < 0.05). PTA threshold was significantly correlated with the impairments of overall cognitive function and cognitive domains of memory and language, and ADL in patients with AD (P < 0.05). (2) P-tau (S199) level was significantly increased in CSF from AD-HL group (P < 0.05), and was significantly and positively correlated with PTA threshold in patients with AD. (3) MMP-3 level was significantly elevated in CSF from AD-HL group (P < 0.05), and was significantly and positively correlated with PTA threshold in patients with AD (P < 0.05). (4) In AD-HL group, P-tau (S199) level was significantly and positively correlated with the levels of MMP-2 and MMP-3 in CSF (P < 0.05). Conclusion AD-HL patients have severely compromised overall cognitive function, multiple cognitive domains, and ADL. The potential mechanisms of AD-HL involve elevations of AD neuropathological biomarker of P-tau (S199) and BBB factor of MMP-3, and close correlations between P-tau (S199) and MMP-2/MMP-3 in CSF. Findings from this investigation highly suggest significance of early evaluation of HL for delaying AD progression, and indicate new directions of drug development by inhibiting neuropathological biomarkers of AD and protecting BBB.
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Affiliation(s)
- Wei-jiao Zhang
- Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Dan-ning Li
- Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Teng-hong Lian
- Center for Cognitive Neurology, Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Peng Guo
- Center for Cognitive Neurology, Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Ya-nan Zhang
- Department of Blood Transfusion, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Jing-hui Li
- Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Hui-ying Guan
- Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Ming-yue He
- Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Wen-jing Zhang
- Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Wei-jia Zhang
- Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Dong-mei Luo
- Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Xiao-min Wang
- Department of Physiology, Capital Medical University, Beijing, China
| | - Wei Zhang
- Center for Cognitive Neurology, Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- China National Clinical Research Center for Neurological Diseases, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- Center of Parkinson’s Disease, Beijing Institute for Brain Disorders, Beijing, China
- Beijing Key Laboratory on Parkinson’s Disease, Beijing, China
- *Correspondence: Wei Zhang,
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Priestley JB, Bowler JC, Rolotti SV, Fusi S, Losonczy A. Signatures of rapid plasticity in hippocampal CA1 representations during novel experiences. Neuron 2022; 110:1978-1992.e6. [PMID: 35447088 PMCID: PMC9233041 DOI: 10.1016/j.neuron.2022.03.026] [Citation(s) in RCA: 52] [Impact Index Per Article: 17.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Revised: 01/19/2022] [Accepted: 03/16/2022] [Indexed: 11/25/2022]
Abstract
Neurons in the hippocampus exhibit a striking selectivity for specific combinations of sensory features, forming representations that are thought to subserve episodic memory. Even during completely novel experiences, hippocampal "place cells" are rapidly configured such that the population sparsely encodes visited locations, stabilizing within minutes of the first exposure to a new environment. What mechanisms enable this fast encoding of experience? Using virtual reality and neural population recordings in mice, we dissected the effects of novelty and experience on the dynamics of place field formation. During place field formation, many CA1 neurons immediately modulated the amplitude of their activity and shifted the location of their field, rapid changes in tuning predicted by behavioral timescale synaptic plasticity (BTSP). Signatures of BTSP were particularly enriched during the exploration of a novel context and decayed with experience. Our data suggest that novelty modulates the effective learning rate in CA1, favoring rapid mechanisms of field formation to encode a new experience.
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Affiliation(s)
- James B Priestley
- Department of Neuroscience, Columbia University, New York, NY 10027, USA; Doctoral Program in Neurobiology and Behavior, Columbia University, New York, NY 10027, USA; Center for Theoretical Neuroscience, Columbia University, New York, NY 10027, USA.
| | - John C Bowler
- Department of Neuroscience, Columbia University, New York, NY 10027, USA; Doctoral Program in Neurobiology and Behavior, Columbia University, New York, NY 10027, USA
| | - Sebi V Rolotti
- Department of Neuroscience, Columbia University, New York, NY 10027, USA; Doctoral Program in Neurobiology and Behavior, Columbia University, New York, NY 10027, USA
| | - Stefano Fusi
- Department of Neuroscience, Columbia University, New York, NY 10027, USA; Center for Theoretical Neuroscience, Columbia University, New York, NY 10027, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY 10027, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA.
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33
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Takehara-Nishiuchi K. Neuronal ensemble dynamics in associative learning. Curr Opin Neurobiol 2022; 73:102530. [DOI: 10.1016/j.conb.2022.102530] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Revised: 02/26/2022] [Accepted: 03/02/2022] [Indexed: 01/19/2023]
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Herbst MR, Twining RC, Gilmartin MR. Ventral hippocampal shock encoding modulates the expression of trace cued fear. Neurobiol Learn Mem 2022; 190:107610. [PMID: 35302040 DOI: 10.1016/j.nlm.2022.107610] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Revised: 02/02/2022] [Accepted: 03/03/2022] [Indexed: 12/24/2022]
Abstract
The hippocampus is crucial for associative fear learning when the anticipation of threat requires temporal or contextual binding of predictive stimuli as in trace and contextual fear conditioning. Compared with the dorsal hippocampus, far less is known about the contribution of the ventral hippocampus to fear learning. The ventral hippocampus, which is highly interconnected with defensive and emotional networks, has a prominent role in both innate and learned affective behaviors including anxiety, fear, and reward. Lesions or temporary inactivation of the ventral hippocampus impair both cued and contextual fear learning, but whether the ventral hippocampal role in learning is driven by affective processing, associative encoding, or both is not clear. Here, we used trace fear conditioning in mixed sex cohorts to assess the contribution of shock-encoding to the acquisition of cued and contextual fear memories. Trace conditioning requires subjects to associate an auditory conditional stimulus (CS) with a shock unconditional stimulus (UCS) that are separated in time by a 20-s trace interval. We first recorded neuronal activity in the ventral hippocampus during trace fear conditioning and found that ventral CA1 predominantly encoded the shock reinforcer. Potentiated firing to the CS was evident at testing, but no encoding of the trace interval was observed. We then tested the necessity of shock encoding for conditional fear acquisition by optogenetically silencing ventral hippocampal activity during the UCS on each trial of training. Contrary to our predictions, preventing hippocampal shock-evoked firing did not impair associative fear. Instead, it led to a more prolonged expression of CS freezing across test trials, an effect observed in males, but not females. Contextual fear learning was largely intact, although a subset of animals in each sex were differentially affected by shock-silencing. Taken together, the results show that shock encoding in the ventral hippocampus modulates the expression of learned fear in a sex-specific manner.
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Affiliation(s)
- Matthew R Herbst
- Department of Biomedical Sciences, Marquette University, Milwaukee, WI 53233, USA
| | - Robert C Twining
- Department of Biomedical Sciences, Marquette University, Milwaukee, WI 53233, USA
| | - Marieke R Gilmartin
- Department of Biomedical Sciences, Marquette University, Milwaukee, WI 53233, USA.
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Rolotti SV, Ahmed MS, Szoboszlay M, Geiller T, Negrean A, Blockus H, Gonzalez KC, Sparks FT, Solis Canales AS, Tuttman AL, Peterka DS, Zemelman BV, Polleux F, Losonczy A. Local feedback inhibition tightly controls rapid formation of hippocampal place fields. Neuron 2022; 110:783-794.e6. [PMID: 34990571 PMCID: PMC8897257 DOI: 10.1016/j.neuron.2021.12.003] [Citation(s) in RCA: 46] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Revised: 10/22/2021] [Accepted: 12/01/2021] [Indexed: 12/15/2022]
Abstract
Hippocampal place cells underlie spatial navigation and memory. Remarkably, CA1 pyramidal neurons can form new place fields within a single trial by undergoing rapid plasticity. However, local feedback circuits likely restrict the rapid recruitment of individual neurons into ensemble representations. This interaction between circuit dynamics and rapid feature coding remains unexplored. Here, we developed "all-optical" approaches combining novel optogenetic induction of rapidly forming place fields with 2-photon activity imaging during spatial navigation in mice. We find that induction efficacy depends strongly on the density of co-activated neurons. Place fields can be reliably induced in single cells, but induction fails during co-activation of larger subpopulations due to local circuit constraints imposed by recurrent inhibition. Temporary relief of local inhibition permits the simultaneous induction of place fields in larger ensembles. We demonstrate the behavioral implications of these dynamics, showing that our ensemble place field induction protocol can enhance subsequent spatial association learning.
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Affiliation(s)
- Sebi V Rolotti
- Department of Neuroscience, Columbia University, New York, NY 10032, USA; Doctoral Program in Neurobiology and Behavior, Columbia University, New York, NY 10027, USA.
| | - Mohsin S Ahmed
- Department of Psychiatry, Columbia University, New York, NY 10032, USA; Division of Molecular Therapeutics, New York State Psychiatric Institute, New York, NY 10032, USA.
| | - Miklos Szoboszlay
- Department of Neuroscience, Columbia University, New York, NY 10032, USA
| | - Tristan Geiller
- Department of Neuroscience, Columbia University, New York, NY 10032, USA
| | - Adrian Negrean
- Department of Neuroscience, Columbia University, New York, NY 10032, USA
| | - Heike Blockus
- Department of Neuroscience, Columbia University, New York, NY 10032, USA
| | - Kevin C Gonzalez
- Department of Neuroscience, Columbia University, New York, NY 10032, USA; Doctoral Program in Neurobiology and Behavior, Columbia University, New York, NY 10027, USA
| | - Fraser T Sparks
- Department of Neuroscience, Columbia University, New York, NY 10032, USA
| | - Ana Sofia Solis Canales
- Division of Molecular Therapeutics, New York State Psychiatric Institute, New York, NY 10032, USA
| | - Anna L Tuttman
- Department of Neuroscience, Columbia University, New York, NY 10032, USA
| | - Darcy S Peterka
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA
| | - Boris V Zemelman
- Center for Learning and Memory, The University of Texas at Austin, Austin, TX 78712, USA; Department of Neuroscience, The University of Texas at Austin, Austin, TX 78712, USA
| | - Franck Polleux
- Department of Neuroscience, Columbia University, New York, NY 10032, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY 10032, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA
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36
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Namkung H, Thomas KL, Hall J, Sawa A. Parsing neural circuits of fear learning and extinction across basic and clinical neuroscience: Towards better translation. Neurosci Biobehav Rev 2022; 134:104502. [PMID: 34921863 DOI: 10.1016/j.neubiorev.2021.12.025] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2021] [Revised: 12/13/2021] [Accepted: 12/14/2021] [Indexed: 12/22/2022]
Abstract
Over the past decades, studies of fear learning and extinction have advanced our understanding of the neurobiology of threat and safety learning. Animal studies can provide mechanistic/causal insights into human brain regions and their functional connectivity involved in fear learning and extinction. Findings in humans, conversely, may further enrich our understanding of neural circuits in animals by providing macroscopic insights at the level of brain-wide networks. Nevertheless, there is still much room for improvement in translation between basic and clinical research on fear learning and extinction. Through the lens of neural circuits, in this article, we aim to review the current knowledge of fear learning and extinction in both animals and humans, and to propose strategies to fill in the current knowledge gap for the purpose of enhancing clinical benefits.
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Affiliation(s)
- Ho Namkung
- Department of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA; Department of Psychiatry, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA
| | - Kerrie L Thomas
- Neuroscience and Mental Health Research Institute, Cardiff University, Cardiff, UK; School of Biosciences, Cardiff University, Cardiff, UK
| | - Jeremy Hall
- Neuroscience and Mental Health Research Institute, Cardiff University, Cardiff, UK; School of Medicine, Cardiff University, Cardiff, UK
| | - Akira Sawa
- Department of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA; Department of Psychiatry, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA; Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA; Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA; Department of Mental Health, Johns Hopkins University Bloomberg School of Public Health, Baltimore, MD, 21287, USA.
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37
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Twarkowksi H, Steininger V, Kim MJ, Sahay A. A dentate gyrus- CA3 inhibitory circuit promotes evolution of hippocampal-cortical ensembles during memory consolidation. eLife 2022; 11:70586. [PMID: 35191834 PMCID: PMC8903830 DOI: 10.7554/elife.70586] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Accepted: 02/21/2022] [Indexed: 11/13/2022] Open
Abstract
Memories encoded in the dentate gyrus (DG) - CA3 circuit of the hippocampus are routed from CA1 to anterior cingulate cortex (ACC) for consolidation. Although CA1 parvalbumin inhibitory neurons (PV INs) orchestrate hippocampal-cortical communication, we know less about CA3 PV INs or DG - CA3 principal neuron - IN circuit mechanisms that contribute to evolution of hippocampal-cortical ensembles during memory consolidation. Using viral genetics to selectively mimic and boost an endogenous learning-dependent circuit mechanism, DG cell recruitment of CA3 PV INs and feed-forward inhibition (FFI) in CA3, in combination with longitudinal in vivo calcium imaging, we demonstrate that FFI facilitates formation and maintenance of context-associated neuronal ensembles in CA1. Increasing FFI in DG - CA3 promoted context specificity of neuronal ensembles in ACC over time and enhanced long-term contextual fear memory. In vivo LFP recordings in mice with increased FFI in DG - CA3 identified enhanced CA1 sharp-wave ripple - ACC spindle coupling as a potential network mechanism facilitating memory consolidation. Our findings illuminate how FFI in DG - CA3 dictates evolution of ensemble properties in CA1 and ACC during memory consolidation and suggest a teacher-like function for hippocampal CA1 in stabilization and re-organization of cortical representations.
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Affiliation(s)
- Hannah Twarkowksi
- Center for Regenerative Medicine, Massachusetts General Hospital, Boston, United States
| | - Victor Steininger
- Center for Regenerative Medicine, Massachusetts General Hospital, Boston, United States
| | - Min Jae Kim
- Center for Regenerative Medicine, Massachusetts General Hospital, Boston, United States
| | - Amar Sahay
- Center for Regenerative Medicine, Massachusetts General Hospital, Boston, United States
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38
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Jiang WC, Xu S, Dudman JT. Hippocampal representations of foraging trajectories depend upon spatial context. Nat Neurosci 2022; 25:1693-1705. [PMID: 36446934 PMCID: PMC9708565 DOI: 10.1038/s41593-022-01201-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Accepted: 10/12/2022] [Indexed: 11/30/2022]
Abstract
Animals learn trajectories to rewards in both spatial, navigational contexts and relational, non-navigational contexts. Synchronous reactivation of hippocampal activity is thought to be critical for recall and evaluation of trajectories for learning. Do hippocampal representations differentially contribute to experience-dependent learning of trajectories across spatial and relational contexts? In this study, we trained mice to navigate to a hidden target in a physical arena or manipulate a joystick to a virtual target to collect delayed rewards. In a navigational context, calcium imaging in freely moving mice revealed that synchronous CA1 reactivation was retrospective and important for evaluation of prior navigational trajectories. In a non-navigational context, reactivation was prospective and important for initiation of joystick trajectories, even in the same animals trained in both contexts. Adaptation of trajectories to a new target was well-explained by a common learning algorithm in which hippocampal activity makes dissociable contributions to reinforcement learning computations depending upon spatial context.
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Affiliation(s)
- Wan-Chen Jiang
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
| | - Shengjin Xu
- grid.443970.dJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA USA ,grid.507732.4Present Address: Institute of Neuroscience, State Key Laboratory of Neuroscience, Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai, China
| | - Joshua T. Dudman
- grid.443970.dJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA USA
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Terada S, Geiller T, Liao Z, O'Hare J, Vancura B, Losonczy A. Adaptive stimulus selection for consolidation in the hippocampus. Nature 2022; 601:240-244. [PMID: 34880499 PMCID: PMC9380538 DOI: 10.1038/s41586-021-04118-6] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Accepted: 10/08/2021] [Indexed: 01/03/2023]
Abstract
Associative memories guide behavioural adaptation by binding together outcome-predictive sensory stimuli1,2. However, in a feature-rich environment, only a subset of stimuli may predict a desired outcome3,4. How neural circuits enable behavioural adaptation by selectively and durably representing subsets of sensory stimuli that are pertinent to a specific outcome is not known. We investigated this feature selection process in the hippocampus during memory acquisition and subsequent consolidation. Two-photon calcium imaging of CA3 axonal projections to CA1 combined with simultaneous local field potential recordings revealed that CA3 projections that encode behaviourally informative sensory stimuli were selectively recruited during the memory replay events that underlie hippocampal memory consolidation5. These axonal projections formed sequential assemblies that conjunctively link sensory features to spatial location and thus reward proximity. By contrast, axons encoding uninformative, peripatetic sensory cues were notably suppressed during memory replay. Thus, while the hippocampus comprehensively encodes the real-time sensory environment, it implements a flexible filtering mechanism to maximize the utility of memories destined for long-term storage. We propose that utility-dependent recruitment of sensory experience during memory consolidation is a general coding principle for associative learning.
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Affiliation(s)
- Satoshi Terada
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Tristan Geiller
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Zhenrui Liao
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Justin O'Hare
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Bert Vancura
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY, USA.
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
- The Kavli Institute for Brain Science, Columbia University, New York, NY, USA.
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40
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Zhao X, Zhou Y, Wei K, Bai X, Zhang J, Zhou M, Sun X. Associations of sensory impairment and cognitive function in middle-aged and older Chinese population: The China Health and Retirement Longitudinal Study. J Glob Health 2021; 11:08008. [PMID: 34956639 PMCID: PMC8684796 DOI: 10.7189/jogh.11.08008] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Background Little is known about the associations between vision impairment, hearing impairment, and cognitive function. The aim of this study was to examine whether vision and hearing impairment were associated with a high risk for cognitive impairment in middle-aged and older Chinese adults. Methods A total of 13 914 Chinese adults from the China Health and Retirement Longitudinal Study (CHARLS) baseline were selected for analysis. Sensory impairment was assessed from a single self-report question, and we categorized sensory impairment into four groups: no sensory impairment, vision impairment, hearing impairment, and dual sensory impairment. Cognitive assessment covered memory, mental state, and cognition, and the data was obtained through a questionnaire. Results Memory was negatively associated with hearing impairment (β = -0.043, 95% confidence interval (CI) = -0.076, -0.043) and dual sensory impairment (β = -0.033, 95% CI = -0.049, -0.017); mental status was negatively associated with vision impairment (β = -0.034, 95% CI = -0.049, -0.018), hearing impairment (β = -0.070, 95% CI = -0.086, -0.055), and dual sensory impairment (β = -0.054, 95% CI = -0.070, -0.039); and cognition was negatively associated with vision impairment (β = -0.028, 95% CI = -0.044, -0.013), hearing impairment (β = -0.074, 95% CI = -0.090, -0.059), and dual sensory impairment (β = -0.052, 95% CI = -0.067, -0.036), even after adjusting for demographics, social economic factors, and lifestyle behavior. Conclusions Vision and hearing impairment are negatively associated with memory, mental status, and cognition for middle-aged and elderly Chinese adults. There were stronger negative associations between sensory impairment and cognitive-related indicators in the elderly compared to the middle-aged.
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Affiliation(s)
- Xiaohuan Zhao
- Department of Ophthalmology, Shanghai General Hospital (Shanghai First People's Hospital), Shanghai Jiao Tong University School of Medicine, Shanghai, China.,National Clinical Research Center for Eye Diseases, Shanghai, China.,Shanghai Key Laboratory of Fundus Diseases, Shanghai, China
| | - Yifan Zhou
- Putuo People's Hospital, Tongji University, Shanghai 200060, China
| | - Kunchen Wei
- Department of Plastic and Reconstructive Surgery, Shanghai Ninth People's Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China
| | - Xinyue Bai
- Department of Ophthalmology, Shanghai General Hospital (Shanghai First People's Hospital), Shanghai Jiao Tong University School of Medicine, Shanghai, China.,National Clinical Research Center for Eye Diseases, Shanghai, China.,Shanghai Key Laboratory of Fundus Diseases, Shanghai, China
| | - Jingfa Zhang
- Department of Ophthalmology, Shanghai General Hospital (Shanghai First People's Hospital), Shanghai Jiao Tong University School of Medicine, Shanghai, China.,National Clinical Research Center for Eye Diseases, Shanghai, China.,Shanghai Key Laboratory of Fundus Diseases, Shanghai, China
| | - Minwen Zhou
- Department of Ophthalmology, Shanghai General Hospital (Shanghai First People's Hospital), Shanghai Jiao Tong University School of Medicine, Shanghai, China.,National Clinical Research Center for Eye Diseases, Shanghai, China.,Shanghai Key Laboratory of Fundus Diseases, Shanghai, China
| | - Xiaodong Sun
- Department of Ophthalmology, Shanghai General Hospital (Shanghai First People's Hospital), Shanghai Jiao Tong University School of Medicine, Shanghai, China.,National Clinical Research Center for Eye Diseases, Shanghai, China.,Shanghai Key Laboratory of Fundus Diseases, Shanghai, China
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41
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Jiang Z, Zhou J, Hou T, Wong KYM, Huang H. Associative memory model with arbitrary Hebbian length. Phys Rev E 2021; 104:064306. [PMID: 35030887 DOI: 10.1103/physreve.104.064306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Accepted: 11/29/2021] [Indexed: 06/14/2023]
Abstract
Conversion of temporal to spatial correlations in the cortex is one of the most intriguing functions in the brain. The learning at synapses triggering the correlation conversion can take place in a wide integration window, whose influence on the correlation conversion remains elusive. Here we propose a generalized associative memory model of pattern sequences, in which pattern separations within an arbitrary Hebbian length are learned. The model can be analytically solved, and predicts that a small Hebbian length can already significantly enhance the correlation conversion, i.e., the stimulus-induced attractor can be highly correlated with a significant number of patterns in the stored sequence, thereby facilitating state transitions in the neural representation space. Moreover, an anti-Hebbian component is able to reshape the energy landscape of memories, akin to the memory regulation function during sleep. Our work thus establishes the fundamental connection between associative memory, Hebbian length, and correlation conversion in the brain.
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Affiliation(s)
- Zijian Jiang
- PMI Lab, School of Physics, Sun Yat-sen University, Guangzhou 510275, People's Republic of China
| | - Jianwen Zhou
- PMI Lab, School of Physics, Sun Yat-sen University, Guangzhou 510275, People's Republic of China and CAS Key Laboratory for Theoretical Physics, Institute of Theoretical Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
| | - Tianqi Hou
- Department of Physics, Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, People's Republic of China and Theory Lab, Central Research Institute, 2012 Labs, Huawei Technologies Co., Ltd., Hong Kong Science Park, People's Republic of China
| | - K Y Michael Wong
- Department of Physics, Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, People's Republic of China
| | - Haiping Huang
- PMI Lab, School of Physics, Sun Yat-sen University, Guangzhou 510275, People's Republic of China
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42
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Zhou J, Jiang Z, Hou T, Chen Z, Wong KYM, Huang H. Eigenvalue spectrum of neural networks with arbitrary Hebbian length. Phys Rev E 2021; 104:064307. [PMID: 35030940 DOI: 10.1103/physreve.104.064307] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Accepted: 11/29/2021] [Indexed: 06/14/2023]
Abstract
Associative memory is a fundamental function in the brain. Here, we generalize the standard associative memory model to include long-range Hebbian interactions at the learning stage, corresponding to a large synaptic integration window. In our model, the Hebbian length can be arbitrarily large. The spectral density of the coupling matrix is derived using the replica method, which is also shown to be consistent with the results obtained by applying the free probability method. The maximal eigenvalue is then obtained by an iterative equation, related to the paramagnetic to spin glass transition in the model. Altogether, this work establishes the connection between the associative memory with arbitrary Hebbian length and the asymptotic eigen-spectrum of the neural-coupling matrix.
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Affiliation(s)
- Jianwen Zhou
- PMI Lab, School of Physics, Sun Yat-sen University, Guangzhou 510275, People's Republic of China and CAS Key Laboratory for Theoretical Physics, Institute of Theoretical Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
| | - Zijian Jiang
- PMI Lab, School of Physics, Sun Yat-sen University, Guangzhou 510275, People's Republic of China
| | - Tianqi Hou
- Department of Physics, the Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, People's Republic of China and Theory Lab, Central Research Institute, 2012 Labs, Huawei Technologies Co., Ltd., Hong Kong Science Park, People's Republic of China
| | - Ziming Chen
- PMI Lab, School of Physics, Sun Yat-sen University, Guangzhou 510275, People's Republic of China and Department of Electronic Engineering, Tsinghua University, Beijing 100084, People's Republic of China
| | - K Y Michael Wong
- Department of Physics, the Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, People's Republic of China
| | - Haiping Huang
- PMI Lab, School of Physics, Sun Yat-sen University, Guangzhou 510275, People's Republic of China
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43
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Silent Synapses in Cocaine-Associated Memory and Beyond. J Neurosci 2021; 41:9275-9285. [PMID: 34759051 DOI: 10.1523/jneurosci.1559-21.2021] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 09/22/2021] [Accepted: 09/27/2021] [Indexed: 11/21/2022] Open
Abstract
Glutamatergic synapses are key cellular sites where cocaine experience creates memory traces that subsequently promote cocaine craving and seeking. In addition to making across-the-board synaptic adaptations, cocaine experience also generates a discrete population of new synapses that selectively encode cocaine memories. These new synapses are glutamatergic synapses that lack functionally stable AMPARs, often referred to as AMPAR-silent synapses or, simply, silent synapses. They are generated de novo in the NAc by cocaine experience. After drug withdrawal, some of these synapses mature by recruiting AMPARs, contributing to the consolidation of cocaine-associated memory. After cue-induced retrieval of cocaine memories, matured silent synapses alternate between two dynamic states (AMPAR-absent vs AMPAR-containing) that correspond with the behavioral manifestations of destabilization and reconsolidation of these memories. Here, we review the molecular mechanisms underlying silent synapse dynamics during behavior, discuss their contributions to circuit remodeling, and analyze their role in cocaine-memory-driven behaviors. We also propose several mechanisms through which silent synapses can form neuronal ensembles as well as cross-region circuit engrams for cocaine-specific behaviors. These perspectives lead to our hypothesis that cocaine-generated silent synapses stand as a distinct set of synaptic substrates encoding key aspects of cocaine memory that drive cocaine relapse.
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44
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Comeras LB, Hörmer N, Mohan Bethuraj P, Tasan RO. NPY Released From GABA Neurons of the Dentate Gyrus Specially Reduces Contextual Fear Without Affecting Cued or Trace Fear. Front Synaptic Neurosci 2021; 13:635726. [PMID: 34122036 PMCID: PMC8187774 DOI: 10.3389/fnsyn.2021.635726] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 04/20/2021] [Indexed: 11/15/2022] Open
Abstract
Disproportionate, maladapted, and generalized fear are essential hallmarks of posttraumatic stress disorder (PTSD), which develops upon severe trauma in a subset of exposed individuals. Among the brain areas that are processing fear memories, the hippocampal formation exerts a central role linking emotional-affective with cognitive aspects. In the hippocampus, neuronal excitability is constrained by multiple GABAergic interneurons with highly specialized functions and an extensive repertoire of co-released neuromodulators. Neuropeptide Y (NPY) is one of these co-transmitters that significantly affects hippocampal signaling, with ample evidence supporting its fundamental role in emotional, cognitive, and metabolic circuitries. Here we investigated the role of NPY in relation to GABA, both released from the same interneurons of the dorsal dentate gyrus (DG), in different aspects of fear conditioning. We demonstrated that activation of dentate GABA neurons specifically during fear recall reduced cue-related as well as trace-related freezing behavior, whereas inhibition of the same neurons had no significant effects. Interestingly, concomitant overexpression of NPY in these neurons did not further modify fear recall, neither under baseline conditions nor upon chemogenetic stimulation. However, potentially increased co-release of NPY substantially reduced contextual fear, promoted extinction learning, and long-term suppression of fear in a foreground context–conditioning paradigm. Importantly, NPY in the dorsal DG was not only expressed in somatostatin neurons, but also in parvalbumin-positive basket cells and axoaxonic cells, indicating intense feedback and feedforward modulation of hippocampal signaling and precise curtailing of neuronal engrams. Thus, these findings suggest that co-release of NPY from specific interneuron populations of the dorsal DG modifies dedicated aspects of hippocampal processing by sharpening the activation of neural engrams and the consecutive fear response. Since inappropriate and generalized fear is the major impediment in the treatment of PTSD patients, the dentate NPY system may be a suitable access point to ameliorate PTSD symptoms and improve the inherent disease course.
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Affiliation(s)
- Lucas B Comeras
- Department of Pharmacology, Medical University Innsbruck, Innsbruck, Austria
| | - Noa Hörmer
- Department of Pharmacology, Medical University Innsbruck, Innsbruck, Austria
| | | | - Ramon O Tasan
- Department of Pharmacology, Medical University Innsbruck, Innsbruck, Austria
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Frost NA, Haggart A, Sohal VS. Dynamic patterns of correlated activity in the prefrontal cortex encode information about social behavior. PLoS Biol 2021; 19:e3001235. [PMID: 33939689 PMCID: PMC8118626 DOI: 10.1371/journal.pbio.3001235] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Revised: 05/13/2021] [Accepted: 04/14/2021] [Indexed: 01/20/2023] Open
Abstract
New technologies make it possible to measure activity from many neurons simultaneously. One approach is to analyze simultaneously recorded neurons individually, then group together neurons which increase their activity during similar behaviors into an "ensemble." However, this notion of an ensemble ignores the ability of neurons to act collectively and encode and transmit information in ways that are not reflected by their individual activity levels. We used microendoscopic GCaMP imaging to measure prefrontal activity while mice were either alone or engaged in social interaction. We developed an approach that combines a neural network classifier and surrogate (shuffled) datasets to characterize how neurons synergistically transmit information about social behavior. Notably, unlike optimal linear classifiers, a neural network classifier with a single linear hidden layer can discriminate network states which differ solely in patterns of coactivity, and not in the activity levels of individual neurons. Using this approach, we found that surrogate datasets which preserve behaviorally specific patterns of coactivity (correlations) outperform those which preserve behaviorally driven changes in activity levels but not correlated activity. Thus, social behavior elicits increases in correlated activity that are not explained simply by the activity levels of the underlying neurons, and prefrontal neurons act collectively to transmit information about socialization via these correlations. Notably, this ability of correlated activity to enhance the information transmitted by neuronal ensembles is diminished in mice lacking the autism-associated gene Shank3. These results show that synergy is an important concept for the coding of social behavior which can be disrupted in disease states, reveal a specific mechanism underlying this synergy (social behavior increases correlated activity within specific ensembles), and outline methods for studying how neurons within an ensemble can work together to encode information.
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Affiliation(s)
- Nicholas A. Frost
- Department of Neurology, University of California, San Francisco, San Francisco, California, United States of America
- Center for Integrative Neuroscience, University of California, San Francisco, San Francisco, California, United States of America
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, California, United States of America
- Kavli Institute for Fundamental Neuroscience, University of California, San Francisco, San Francisco, California, United States of America
| | - Anna Haggart
- Department of Neurology, University of California, San Francisco, San Francisco, California, United States of America
- Center for Integrative Neuroscience, University of California, San Francisco, San Francisco, California, United States of America
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, California, United States of America
- Kavli Institute for Fundamental Neuroscience, University of California, San Francisco, San Francisco, California, United States of America
| | - Vikaas S. Sohal
- Center for Integrative Neuroscience, University of California, San Francisco, San Francisco, California, United States of America
- Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, California, United States of America
- Kavli Institute for Fundamental Neuroscience, University of California, San Francisco, San Francisco, California, United States of America
- Department of Psychiatry, University of California, San Francisco, San Francisco, California, United States of America
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46
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Neuronal ensembles in memory processes. Semin Cell Dev Biol 2021; 125:136-143. [PMID: 33858772 DOI: 10.1016/j.semcdb.2021.04.004] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Revised: 03/30/2021] [Accepted: 04/01/2021] [Indexed: 12/19/2022]
Abstract
A neuronal ensemble represents the concomitant activity of a specific group of neurons that could encompass a broad repertoire of brain functions such as motor, perceptual, memory or cognitive states. On the other hand, a memory engram portrays the physical manifestation of memory or the changes that enable learning and retrieval. Engram studies focused for many years on finding where memories are stored as in, which cells or brain regions represent a memory trace, and disregarded the investigation of how neuronal activity patterns give rise to such memories. Recent experiments suggest that the association and reactivation of specific neuronal groups could be the main mechanism underlying the brain's ability to remember past experiences and envision future actions. Thus, the growing consensus is that the interaction between neuronal ensembles could allow sequential activity patterns to become memories and recurrent memories to compose complex behaviors. The goal of this review is to propose how the neuronal ensemble framework could be translated and useful to understand memory processes.
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Olevska A, Spanagel R, Bernardi RE. Impaired contextual fear conditioning in RasGRF2 mutant mice is likely Ras-ERK-dependent. Neurobiol Learn Mem 2021; 181:107435. [PMID: 33831510 DOI: 10.1016/j.nlm.2021.107435] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Revised: 03/08/2021] [Accepted: 03/31/2021] [Indexed: 10/21/2022]
Abstract
Ras/Raf/MEK/ERK (Ras-ERK) signaling has been shown to play an important role in fear acquisition. However, little information is known regarding the mechanisms that contribute to the regulation of this pathway in terms of the learning of conditioned fears. Ras Guanine Nucleotide Releasing Factor 2 (RasGRF2) is one of two guanine nucleotide exchange factors (GEF) that regulates the Ras-ERK signaling pathway in a Ca2+-dependent manner via control of the cycling of Ras isoforms between an inactive and active state. Here we sought to determine the role of RasGRF2 on contextual fear conditioning in RasGRF2 knockout (KO) and their wild type (WT) counterparts. Male KO and WT mice underwent a single session of contextual fear conditioning (12 min, 4 unsignaled shocks), followed by either daily 12-min retention trials or the molecular analysis of Ras activation and pERK1/2 activity. KO mice showed an impaired acquisition of contextual fear, as demonstrated by reduced freezing during fear conditioning and 24-hr retention tests relative to WT mice. Ras analysis following fear conditioning demonstrated a reduction in Ras activation in the hippocampus as well as a reduction in pERK1/2 in the CA1 region of the hippocampus in KO mice, suggesting that the decrease in fear conditioning in KO mice is at least in part due to the impairment of Ras-ERK signaling in the hippocampus during learning. These data indicate a role for RasGRF2 in contextual fear conditioning in mice that may be Ras-ERK-dependent.
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Affiliation(s)
- Anastasia Olevska
- Institute of Psychopharmacology, Central Institute of Mental Health, Medical Faculty Mannheim/Heidelberg University, Mannheim, Germany
| | - Rainer Spanagel
- Institute of Psychopharmacology, Central Institute of Mental Health, Medical Faculty Mannheim/Heidelberg University, Mannheim, Germany
| | - Rick E Bernardi
- Institute of Psychopharmacology, Central Institute of Mental Health, Medical Faculty Mannheim/Heidelberg University, Mannheim, Germany.
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Dudok B, Klein PM, Hwaun E, Lee BR, Yao Z, Fong O, Bowler JC, Terada S, Sparks FT, Szabo GG, Farrell JS, Berg J, Daigle TL, Tasic B, Dimidschstein J, Fishell G, Losonczy A, Zeng H, Soltesz I. Alternating sources of perisomatic inhibition during behavior. Neuron 2021; 109:997-1012.e9. [PMID: 33529646 PMCID: PMC7979482 DOI: 10.1016/j.neuron.2021.01.003] [Citation(s) in RCA: 78] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 12/02/2020] [Accepted: 01/04/2021] [Indexed: 12/30/2022]
Abstract
Interneurons expressing cholecystokinin (CCK) and parvalbumin (PV) constitute two key GABAergic controllers of hippocampal pyramidal cell output. Although the temporally precise and millisecond-scale inhibitory regulation of neuronal ensembles delivered by PV interneurons is well established, the in vivo recruitment patterns of CCK-expressing basket cell (BC) populations has remained unknown. We show in the CA1 of the mouse hippocampus that the activity of CCK BCs inversely scales with both PV and pyramidal cell activity at the behaviorally relevant timescales of seconds. Intervention experiments indicated that the inverse coupling of CCK and PV GABAergic systems arises through a mechanism involving powerful inhibitory control of CCK BCs by PV cells. The tightly coupled complementarity of two key microcircuit regulatory modules demonstrates a novel form of brain-state-specific segregation of inhibition during spontaneous behavior.
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Affiliation(s)
- Barna Dudok
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA.
| | - Peter M Klein
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA
| | - Ernie Hwaun
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA
| | - Brian R Lee
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - Zizhen Yao
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - Olivia Fong
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - John C Bowler
- Department of Neuroscience, Columbia University, New York, NY 10027, USA
| | - Satoshi Terada
- Department of Neuroscience, Columbia University, New York, NY 10027, USA
| | - Fraser T Sparks
- Department of Neuroscience, Columbia University, New York, NY 10027, USA
| | - Gergely G Szabo
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA
| | - Jordan S Farrell
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA
| | - Jim Berg
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - Tanya L Daigle
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - Bosiljka Tasic
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - Jordane Dimidschstein
- Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA
| | - Gord Fishell
- Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Harvard Medical School, Blavatnik Institute, Department of Neurobiology, Boston, MA 02115, USA
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY 10027, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA
| | - Hongkui Zeng
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - Ivan Soltesz
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA
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49
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Miry O, Li J, Chen L. The Quest for the Hippocampal Memory Engram: From Theories to Experimental Evidence. Front Behav Neurosci 2021; 14:632019. [PMID: 33519396 PMCID: PMC7843437 DOI: 10.3389/fnbeh.2020.632019] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2020] [Accepted: 12/17/2020] [Indexed: 11/18/2022] Open
Abstract
More than a century after Richard Semon's theoretical proposal of the memory engram, technological advancements have finally enabled experimental access to engram cells and their functional contents. In this review, we summarize theories and their experimental support regarding hippocampal memory engram formation and function. Specifically, we discuss recent advances in the engram field which help to reconcile two main theories for how the hippocampus supports memory formation: The Memory Indexing and Cognitive Map theories. We also highlight the latest evidence for engram allocation mechanisms through which memories can be linked or separately encoded. Finally, we identify unanswered questions for future investigations, through which a more comprehensive understanding of memory formation and retrieval may be achieved.
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Affiliation(s)
- Omid Miry
- Department of Neurosurgery, Stanford University School of Medicine, Stanford, CA, United States
| | - Jie Li
- Department of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA, United States
| | - Lu Chen
- Department of Neurosurgery, Stanford University School of Medicine, Stanford, CA, United States.,Department of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA, United States
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Deli E, Peters J, Kisvárday Z. The thermodynamics of cognition: A mathematical treatment. Comput Struct Biotechnol J 2021; 19:784-793. [PMID: 33552449 PMCID: PMC7843413 DOI: 10.1016/j.csbj.2021.01.008] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2020] [Revised: 01/07/2021] [Accepted: 01/07/2021] [Indexed: 10/26/2022] Open
Abstract
There is a general expectation that the laws of classical physics must apply to biology, particularly the neural system. The evoked cycle represents the brain's energy/information exchange with the physical environment through stimulus. Therefore, the thermodynamics of emotions might elucidate the neurological origin of intellectual evolution, and explain the psychological and health consequences of positive and negative emotional states based on their energy profiles. We utilized the Carnot cycle and Landauer's principle to analyze the energetic consequences of the brain's resting and evoked states during and after various cognitive states. Namely, positive emotional states can be represented by the reversed Carnot cycle, whereas negative emotional reactions trigger the Carnot cycle. The two conditions have contrasting energetic and entropic aftereffects with consequences for mental energy. The mathematics of the Carnot and reversed Carnot cycles, which can explain recent findings in human psychology, might be constructive in the scientific endeavor in turning psychology into hard science.
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Affiliation(s)
- Eva Deli
- Institute for Consciousness Studies (ICS), Benczur ter 9, Nyiregyhaza 4400, Hungary
| | - James Peters
- Department of Electrical and Computer Engineering, University of Manitoba, 75A Chancellor's Circle, Winnipeg, MB R3T 5V6, Canada
- Department of Mathematics Faculty of Arts and Sciences, Adiyaman University, Adiyaman, Turkey
| | - Zoltán Kisvárday
- MTA-Debreceni Egyetem, Neuroscience Research Group, 4032 Debrecen, Nagyerdei krt.98., Hungary
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