Linking shifts in bacterial community with changes in dissolved organic matter pool in a tropical lake

Characteristics of the presence and migration patterns of DOM between ice and water in the cold and arid Daihai Lake

Seasonal ice cover plays a crucial role in shaping the physical characteristics of lakes in cold and arid regions. Moreover, the ice significantly affects the level and quality of dissolved organic matter (DOM) in the water column. We utilized spectroscopy and mass spectrometry to analyze the molecular composition and distribution of DOM in ice cores and under-ice water in Daihai Lake. We identified the main environmental factors affecting DOM migration through structural equation modelling (SEM). The freezing process created a repulsive effect on DOM, with water samples demonstrating a greater DOM content than ice. The dominant part of the DOM in the ice cores was mainly comprised of protein-like materials (71.45 %), whereas water consisted of humus-like materials (54.81 %). The average molecular weight of the ice cover DOM (m/z = 396.77) was smaller than in the under-ice water (m/z = 405.42). While low-molecular and low-aromatic protein-like material tended to be trapped in the ice layer during ice formation, large-molecular and highly aromatic humic substances were more easily expelled into the water. Interestingly, condensed aromatic hydrocarbons were found to occur less frequently in the ice phase (11 %) compared to the aqueous phase (13 %). Both the lipid and protein/aliphatic compound structures exhibited slightly higher ratios in the ice (6 % and 8 %, respectively) than in water (1 % and 5 %, respectively). SEM between the ice cover environment and DOM indicated that the ice can influence the distribution pattern of DOM through the regulation of internal solute factors and other chemicals. The nature of the DOM and the rate of ice growth also play critical roles in determining the distribution mechanism of DOM for ice and water. The pollutant distribution characteristics and migration patterns between ice and water are essential for comprehending environmental water pollution and promoting pollution management and protection measures in cold region lakes.

Multivariate statistical and bioinformatic analyses for the seasonal variations of actinobacterial community structures in a drinking water reservoir

Actinobacterial community is a conspicuous part of aquatic ecosystems and displays an important role in the case of biogeochemical cycle, but little is known about the seasonal variation of actinobacterial community in reservoir ecological environment. In this study, the high-throughput techniques were used to investigate the structure of the aquatic actinobacterial community and its inducing water quality parameters in different seasons. The results showed that the highest diversity and abundance of actinobacterial community occurred in winter, with Sporichthya (45.42%) being the most abundant genus and Rhodococcus sp. (29.32%) being the most abundant species. Network analysis and correlation analysis suggested that in autumn the dynamics of actinobacterial community were influenced by more factors and Nocardioides sp. SX2R5S2 was the potential keystone species which was negatively correlated with temperature (R = -0.72, P < 0.05). Changes in environmental factors could significantly affect the changes in actinobacterial community, and the dynamics of temperature, dissolved oxygen (DO), and turbidity are potential conspicuous factors influencing seasonal actinobacterial community trends. The partial least squares path modeling further elucidated that the combined effects of DO and temperature not only in the diversity of actinobacterial community but also in other water qualities, while the physiochemical parameters (path coefficient = 1.571, P < 0.05) was strong environmental factors in natural mixture period. These results strengthen our understanding of the dynamics and structures of actinobacterial community in the drinking water reservoirs and provide scientific guidance for further water quality management and protection in water sources.

Hydrogeochemical changes during artificial groundwater well recharge

Artificial groundwater recharge is a relatively economic and efficient method for solving shortages and uneven spatial-temporal distribution of water resources. Changes in groundwater quality during the recharge process are a key issue that must be addressed. Identifying the hydrogeochemical reactions that occur during recharge can be vital in predicting trends in groundwater quality. However, there are few studies on the evolution of groundwater quality during artificial recharge that comprehensively consider environmental, chemical, organic matter, and microbiological indicators. Based on an artificial groundwater recharge experiment in Xiong'an New Area, this study investigated the hydrogeochemical changes during groundwater recharge through a well. The results indicate that (1) as large amounts of recharge water (RW) were injected, the groundwater level initially rose rapidly, then fluctuated slowly, and finally rose again. (2) Water quality indicators, dissolved organic matter (DOM), and microbial communities were influenced by the mixture of RW and the background groundwater before recharge (BGBR), as well as by water-rock interactions, such as mineral dissolution-precipitation and redox reactions. (3) During well recharge, aerobic respiration, nitrification, denitrification, high-valence manganese (Mn) and iron (Fe) minerals reduction dissolution, and Mn2+ and Fe2+ oxidation-precipitation occurred sequentially. (4) DOM analysis showed that protein-like substances in the BGBR were the main carbon sources for aerobic respiration and denitrification, while humic-like substances carried by the RW significantly enhanced Mn and Fe minerals reduction dissolution. Therefore, RW quality significantly affects groundwater quality after artificial groundwater well recharge. Controlling indicators, such as dissolved oxygen (DO) and DOM, in the RW can effectively reduce harm to groundwater quality after recharge. This study is of theoretical and practical significance for in-depth analysis of the evolution of groundwater quality during artificial well recharge, prediction of trends in groundwater quality during and after recharge and ensuring groundwater quality safety.

Response of dissolved organic matter (DOM) and microbial community to submerged macrophytes restoration in lakes: A review

Microorganisms play a crucial role in the biogeochemical processes of Dissolved Organic Matter (DOM), and the properties of DOM also significantly influence changes in microbial community characteristics. This interdependent relationship is vital for the flow of matter and energy within aquatic ecosystems. The presence, growth state, and community characteristics of submerged macrophytes determine the susceptibility of lakes to eutrophication, and restoring a healthy submerged macrophyte community is an effective way to address this issue. However, the transition from eutrophic lakes dominated by planktic algae to medium or low trophic lakes dominated by submerged macrophytes involves significant changes. Changes in aquatic vegetation have greatly affected the source, composition, and bioavailability of DOM. The adsorption and fixation functions of submerged macrophytes determine the migration and storage of DOM and other substances from water to sediment. Submerged macrophytes regulate the characteristics and distribution of microbial communities by controlling the distribution of carbon sources and nutrients in the lake. They further affect the characteristics of the microbial community in the lake environment through their unique epiphytic microorganisms. The unique process of submerged macrophyte recession or restoration can alter the DOM-microbial interaction pattern in lakes through its dual effects on DOM and microbial commu-----nities, ultimately changing the stability of carbon and mineralization pathways in lakes, such as the release of methane and other greenhouse gases. This review provides a fresh perspective on the dynamic changes of DOM and the role of the microbiome in the future of lake ecosystems.

Apple-marigold intercropping improves soil properties by changing soil metabolomics and bacterial community structures

Marigold can protect crops against soil-borne diseases. However, the effects of intercropping with marigold on apple rhizosphere soils are not known. In this study, we investigated the metabolite profiles and bacterial community structures in rhizosphere soils of the apple-marigold intercropping system by high-throughput sequencing and soil metabolomics. The results show that intercropping marigold could significantly enhance soil moisture, nitrogen, and enzyme activities compared with clean tillage. The soil metabolite profiles and the soil bacterial community structures in the rhizosphere soils were different between the inter-and mono-cropping systems. Among nine metabolites, carbohydrates were more increased in the intercropping system than in the monocropping system. Pathway enrichment analysis revealed that the greatest differential, in terms of metabolic pathway, was starch and sucrose metabolism. Moreover, intercropping marigold significantly increased the relative abundance of plant growth promoting bacteria in rhizosphere soils, such as Rhizobiales, Pseudomonadales, and Bacillales. These results indicate that marigold intercropping positively affected the apple orchard's soil quality and may provide a new intercropping technique to improve soil fertility in orchards and promote plant growth.

Analysis of bacterial community distribution characteristics in the downstream section of a cross confluence in a polluted urban channel

Channel confluences are common in urban rivers and caused complex hydrodynamic conditions in the downstream section, significantly influencing the distribution of pollutants and the microbial community. So far, the principles of bacterial community assembly and their linkages with environmental factors are poorly understood. In the present study, the hydrodynamic and pollution conditions were investigated in a typical channel confluence of an urban river in the Yangtze River delta area, China, and their impacts on the bacterial community structure in the water and sediment were characterized using 16S rRNA gene high-throughput sequencing technology. Based on the results, the flow velocity was the crucial factor influencing the dispersal of nutrients, organic compounds, and bacterial communities in the river water. Moreover, the sediments exhibited higher α-diversity and bacterial richness for nitrogen and sulfur cycling than the water. In addition to flow velocity, the contents of total organic carbon, total phosphorus, and heavy metals determined the sediment bacterial communities at varying depths. The predictive analysis of functional gene category indicated differences between the water and sediment communities in metabolic potentials and pathogen risk and provided guidance for water pollution control and the eco-remediation of urban rivers.

Distinct mediating patterns between metal filtering and species coexistence of rare and abundant subcommunities in heavily polluted river sediments

It is unknown how anthropogenic pollutants released into freshwater ecosystems affect the assembly processes of microbial communities in river sediment. We used high-throughput sequencing to examine the assembly of rare and abundant subcommunities in a heavily polluted urban river: the Beiyun River in Beijing, China. Although deterministic processes overrode stochastic processes in shaping local rare and abundant subcommunities, there were distinctly different assembly mechanisms of rare and abundant subcommunities. Rare subcommunity assembly was governed more by interspecificinteractions, and environmental selection and dispersal limitation explained only a small fraction of the variation. However, both factors seemed to govern the assembly of abundant subcommunities. Our results implied that microbial co-occurrence associations tended to be higher when rare subcommunities were less driven by community assembly, and that these associations tended to be lower when abundant subcommunities were more driven by community assembly. A balance between the community assembly and species coexistence was exhibited atthesubcommunitylevel. Importantly, we tried to disentangle the assembly process of abundant subcommunities into introduction and colonization processes characterized by the presence/absence and relative abundance datasets. Interestingly, metals explained the highest percentage of spatial variation in the species introduction process. By affecting nutrient availability, metals also shaped the abundant subcommunity in the species colonization process, but this did not surpass nutrient availability. Therefore, disentangling the introduction and colonization processes enhances our understanding of the assembly mechanisms of microbial communities in heavily polluted running water ecosystems at fine geographical scales.

The importance of rest phase and pollutant removal mechanism of tidal flow constructed wetlands (TFCW) in rural grey water treatment

This paper explored the effects of the rest phase of tidal flow constructed wetlands (TFCW) on pollutant removal and microbial communities, and further analyzed the mechanism of TFCW removal of pollutants from grey water. The results showed that the removal rate of organic matter was 69.91 ± 2.44% in the control group (NR-TFCW) without the rest phase, 94.95 ± 1.17% in the experimental group (TFCW), and 96.95 ± 2.43% in the control group (P-TFCW) with the ventilation pipe enhanced rest phase. Limiting and enhancing the oxygen supply in the emptying stage of TFCW will enhance the overlap rate of microorganisms in the upper, middle and lower layers of the reactor. Enhancing the rest phase of TFCW leaded to better aerobic removal of organic matter in the microbial community, while limiting the rest phase of TFCW results in the opposite. In addition, the species overlap rate of the top, middle and bottom layers of NR-TFCW (69.98%) and P-TFCW (54.29%) was higher than that of TFCW (11.34%). The removal of organic matter by TFCW mainly relied on the adsorption of biochar in the flood phase, and the microorganisms aerobic degraded the organic matter adsorbed on the biochar in the rest phase. And thus form a continuous cycle of adsorption and biological regeneration. The microbial community in TFCW did not have the ability to nitrify, but had the ability to remove phosphorus. Ammonia nitrogen in the influent was adsorbed by biochar or converted into cytoplasm. While the phosphorus in the influent was adsorbed by the biochar, it was also being biologically removed.

The Ecological Differentiation of Particle-Attached and Free-Living Bacterial Communities in a Seasonal Flooding Lake-the Poyang Lake

Particle-attached (PA) and free-living (FL) bacterial communities play essential roles in the biogeochemical cycling of essential nutrients in aquatic environments. However, little is known about the factors that drive the differentiation of bacterial lifestyles, especially in flooding lake systems. Here we assessed the compositional and functional similarities between the FL and PA bacterial fractions in a typical flooding lake-the Poyang Lake (PYL) of China. The results revealed that PA communities had significantly different compositions and functions from FL communities in every hydrological period, and the diversity of both PA and FL communities was affected mainly by the water regime rather than bacterial lifestyles. PA communities were more diverse and enriched with Proteobacteria and Bacteroidetes, while FL communities had more Actinobacteria. There was a higher abundance of photosynthetic and nitrogen-cycling bacterial groups in PA communities, but a higher abundance of members involved in hydrocarbon degradation, aromatic hydrocarbon degradation, and methylotrophy in FL communities. Water properties (e.g., temperature, pH, total phosphorus) significantly regulated the lifestyle variations of PA and FL bacteria in PYL. Collectively, our results have demonstrated a clear ecological differentiation of PA and FL bacterial communities in flooding lakes, suggesting that the connectivity between FL and PA bacterial fractions is water property-related rather than water regime-related.

Spatial and temporal dynamics of actinobacteria in drinking water reservoirs: Novel insights into abundance, community structure, and co-existence model

The control of taste and odor (T&O) in drinking water reservoirs is the main challenge for water supply. T&O is mainly derived from actinobacteria during non-algal blooms. However, few studies have investigated the actinobacterial community in reservoirs, especially the effects of water quality parameters on actinobacteria. This study analyzed the environmental driving force of the actinobacterial community composition and change in time and space through structural equations and network in drinking water reservoirs. The results showed a high abundance of actinobacteria, up to 2.7 × 10⁴ actinobacteria per 1 L, in the hypolimnion of the Lijiahe reservoir in September, which is one order of magnitude greater than that in the Jinpen reservoir. The two drinking water reservoirs had similar dominant genera, mainly Sporichthya sp., and Mycobacterium sp., and difference in the actinobacterial proportions. However, there was a large difference at the dominant species. Rhodococcus fascians (4.02%) was the dominant species in the Lijiahe reservoir, while Mycobacterium chlorophenolicum (6.64%) was the dominant species in the Jinpen reservoir. Network analysis revealed that the structure of the network in the Lijiahe reservoir was more unstable; thus, it was vulnerable to environmental disturbances. In addition, a low abundance of species may play a critical role in the actinobacterial community structure of aquatic ecosystems. Structural equation modeling analysis suggested that water temperature, dissolved oxygen, and nutrition were the dominant factors affecting the abundance and community of actinobacteria. Overall, these findings broaden the understanding of the distribution and co-existence of actinobacterial communities in drinking water reservoirs and provide valuable clues for the biological controls of T&O and reservoir management.

Benthic Biofilm Bacterial Communities and Their Linkage with Water-Soluble Organic Matter in Effluent Receivers

Benthic biofilms are pioneering microbial aggregates responding to effluent discharge from wastewater treatment plants (WWTPs). However, knowledge of the characteristics and linkage of bacterial communities and water-soluble organic matter (WSOM) of benthic biofilms in effluent-receiving rivers remains unknown. Here, we investigated the quality of WSOM and the evolution of bacterial communities in benthic biofilm to evaluate the ecological impacts of effluent discharge on a representative receiving water. Tryptophan-like proteins showed an increased proportion in biofilms collected from the discharge area and downstream from the WWTP, especially in summer. Biofilm WSOM showed weak humic character and strong autochthonous components, and species turnover was proven to be the main factor governing biofilm bacteria community diversity patterns. The bacterial community alpha diversity, interspecies interaction, biological index, and humification index were signally altered in the biofilms from the discharge area, while the values were more similar in biofilms collected upstream and downstream from the WWTP, indicating that both biofilm bacterial communities and WSOM characters have resilience capacities. Although effluent discharge simplified the network pattern of the biofilm bacterial community, its metabolic functional abundance was basically stable. The functional abundance of carbohydrate metabolism and amino acid metabolism in the discharge area increased, and the key modules in the non-random co-occurrence network also verified the important ecological role of carbon metabolism in the effluent-receiving river. The study sheds light on how benthic biofilms respond to effluent discharge from both ecological and material points of view, providing new insights on the feasibility of utilizing benthic biofilms as robust indicators reflecting river ecological health.

Effects of bioturbation by tubificid worms on biogeochemical processes, bacterial community structure and diversity in heterotrophic wetland sediments

Bioturbation activity of tubificid worms has been recognized as a key process influencing organic matter processing and nutrient cycling in benthic aquatic ecosystems. This activity is expected to modify benthic microbial communities by affecting the physical and chemical environment in sediments. Nevertheless, quantifications of bacterial community changes associated with bioturbation in freshwater ecosystems are still lacking. The present study aimed at evaluating the impact of tubificid worms on bacterial community structure using NGS approach (16S metabarcoding) and long (6 months) laboratory experiments on four heterotrophic wetland sediments. Worm bioturbation activity significantly stimulated biogeochemical processes at the water-sediment interface but only had a marginally significant effect on bacterial community structures. Yet, bacterial diversity was consistently reduced in presence of worms. Such decrease could be associated with the stimulation of organic matter mineralization by worms, leading to a reduction of the diversity of trophic niches available for bacterial species. The slight changes in bacterial community structures induced by bioturbation did not appear to control biogeochemical processes. Thus, the stimulation of biogeochemical processes by worm bioturbation was more associated with a stimulation of the initial bacterial community than with a drastic change in bacterial communities induced by worms.

Transformations from specialists to generalists cause bacterial communities are more stable than micro-eukaryotic communities under anthropogenic activity disturbance

Different microbial components have different responses to environmental disturbances. Here, we found that the planktonic bacterial and micro-eukaryotic communities had different responses to anthropogenic activity disturbance in a subtropical river, because they had different survival strategies (generalist and specialist). We used nutrients (nitrogen and phosphorus) as indicators of anthropogenic activities. We found that river stretch 1 showed low nutrient concentrations from October 2018 to September 2019. However, a nutrient disturbance was observed in river stretch 2. The nutrient concentrations increased largely in December and January but recovered to low values in June. Bacterial communities had higher resilience under this disturbance than micro-eukaryotic communities in river stretch 2. The bacterial community composition were quite different between the two river stretches in December and January but were similar in June and July. However, the differences of micro-eukaryotic community composition between the two river stretches were always high during the study period. The bacterial communities in river stretch 2 contained more generalists and nutrient tolerant specialists. The bacterial nutrient tolerant specialists rapidly decreased in the low nutrient months and were replaced by the generalists. Bacteria which were involved in this shifts accounted for 29.3% of the total abundance. However, the micro-eukaryotic communities in river stretch 2 contained more moderate generalists. These moderate generalists were insensitive to the variation of nutrients and only 19.56% of the micro-eukaryotes had significant responses to the disturbance. The survival strategies caused bacterial communities had higher adaptability than eukaryotes to environmental fluctuation.

Impacts of anthropogenic disturbances on microbial community of coastal waters in Shenzhen, South China

During the urbanization, human activities have brought great changes to marine biodiversity and microbial communities of coastal water. Shenzhen is a coastal city that has developed rapidly over the past four decades, but the microbial communities and metabolic potential in offshore water are still not well characterized. Here, 16S rRNA gene V4-V5 sequencing was conducted to determine the microbial components from coastal waters in twenty selected areas of Shenzhen. The results showed a significant difference on the microbial composition between the western and eastern waters. Samples from western coast had more abundant Burkholderiaceae, Sporichthyaceae, Aeromonadaceae, and Methylophilaceae compared to eastern coast, and at the genus level, Candidatus Aquiluna, Aeromonas, Arcobacter, Ottowia and Acidibacter were significantly higher in western waters. There was also a notable difference within the western sample group, suggesting the taxa-compositional heterogeneity. Moreover, analysis of environmental factors and water quality revealed that salinity, pH and dissolved oxygen were relatively decreased in western samples, while total nitrogen, total phosphorus, chemical oxygen demand, and harmful marine vibrio were significantly increased compared to eastern waters. The results suggest the coastal waters pollution is more serious in western Shenzhen than eastern Shenzhen and the microbial communities are altered, which can be associated with anthropogenic disturbances.

Characterization and biogeochemical implications of dissolved organic matter in aquatic environments

Dissolved organic matter (DOM) is viewed as one of the most chemically active organic substances on earth. It plays vital roles in the fate, bioavailability and toxicity of aquatic exogenous chemical species (e.g., heavy metals, organic pollutants, and nanomaterials). The characteristics of DOM such low concentrations, salt interference and complexity in aquatic environments and limitations of pretreatment for sample preparation and application of characterization techniques severely limit understanding of its nature and environmental roles. This review provides a characterization continuum of aquatic DOM, and demonstrate its biogeochemical implications, enabling in-depth insight into its nature and environmental roles. A synthesis of the effective DOM pretreatment strategies, comprising extraction and fractionation methods, and characterization techniques is presented. Additionally, the biogeochemical dynamics of aquatic DOM and its environmental implications are discussed. The findings indicate the collection of representative DOM samples from water as the first and critical step for characterizing its properties, dynamics, and environmental implications. However, various pretreatment procedures may alter DOM composition and structure, producing highly variable recoveries and even influencing its subsequent characterization. Therefore, complimentary use of various characterization techniques is highly recommended to obtain as much information on DOM as possible, as each characterization technique exhibits various advantages and limitations. Moreover, DOM could markedly change the physical and chemical properties of exogenous chemical species, influencing their transformation and mobility, and finally altering their potential bioavailability and toxicity. Several research gaps to be addressed include the impact of pretreatment on the composition and structure of aquatic DOM, molecular-level structural elucidation for DOM, and assessment of the effects of DOM dynamics on the fate, bioavailability and toxicity of exogenous chemical species.

DOM degradation by light and microbes along the Yukon River-coastal ocean continuum

The Arctic is experiencing rapid warming, resulting in fundamental shifts in hydrologic connectivity and carbon cycling. Dissolved organic matter (DOM) is a significant component of the Arctic and global carbon cycle, and significant perturbations to DOM cycling are expected with Arctic warming. The impact of photochemical and microbial degradation, and their interactive effects, on DOM composition and remineralization have been documented in Arctic soils and rivers. However, the role of microbes, sunlight and their interactions on Arctic DOM alteration and remineralization in the coastal ocean has not been considered, particularly during the spring freshet when DOM loads are high, photoexposure can be quite limited and residence time within river networks is low. Here, we collected DOM samples along a salinity gradient in the Yukon River delta, plume and coastal ocean during peak river discharge immediately after spring freshet and explored the role of UV exposure, microbial transformations and interactive effects on DOM quantity and composition. Our results show: (1) photochemical alteration of DOM significantly shifts processing pathways of terrestrial DOM, including increasing relative humification of DOM by microbes by > 10%; (2) microbes produce humic-like material that is not optically distinguishable from terrestrial humics; and (3) size-fractionation of the microbial community indicates a size-dependent role for DOM remineralization and humification of DOM observed through modeled PARAFAC components of fluorescent DOM, either through direct or community effects. Field observations indicate apparent conservative mixing along the salinity gradient; however, changing photochemical and microbial alteration of DOM with increasing salinity indicate changing DOM composition likely due to microbial activity. Finally, our findings show potential for rapid transformation of DOM in the coastal ocean from photochemical and microbial alteration, with microbes responsible for the majority of dissolved organic matter remineralization.

Impacts of fish farming on elemental stoichiometry, fluorescence components, and stable isotopes of dissolved organic matter in a tropical reservoir

Aquaculture impacts on aquatic organic matter and ecosystem integrity are poorly understood, especially in tropical regions. Here, we investigated the impacts of Nile tilapia net cage farming on the elemental stoichiometry, fluorescence components, and stable isotopes of dissolved organic matter (DOM) of the large, tropical Furnas Reservoir (SE Brazil). Early-stage fish farming, i.e., relatively small and recently implemented farms, had detectable incipient effects on DOM characteristics, and these effects differed between reservoir branches. In the less eutrophic Rio Grande branch of the reservoir, we found a reduction in natural humic-like DOM components and an increase in a protein-like DOM component as far as 100 m away from fish farms. Further, we observed a decrease in δ¹⁵N-TDN due to fish farming. In the more eutrophic Rio Sapucaí branch, there were only local decreases in C:N ratios, as well as rises in C:P and N:P of DOM due to fish farming. These results suggest that early-stage fish farming had local but detectable effects on aquatic DOM that depended on previous eutrophication levels and highlight the need to assess the early impacts of fish farming on tropical reservoirs by combining different monitoring strategies.

Seasonal changes in primary production and respiration in a subtropical lake undergoing eutrophication

The balance between gross primary production (GPP) and respiration (R) is frequently used to estimate the role of lakes in the carbon cycle. Seasonal changes in the carbon cycle of subtropical lakes are often underestimated, but changes in meteorological and limnological characteristics often follow the well-defined climatic seasons. Based on 1 year's free-water dissolved oxygen and temperature measurements, we investigated the seasonal changes in primary production and respiration in subtropical Peri Lake in Southern Brazil, which is currently undergoing eutrophication. We expected that periods of high light availability and temperature would lead to a net autotrophic condition. Furthermore, we explored the seasonal coupling between GPP and R, expecting that different sources of organic matter would have different effects on the metabolic rates. We found that Peri Lake was predominately net heterotrophic (GPP  < R). GPP was high during summer and autumn and low in winter, as was R, coinciding with the seasonal changes occurring in light and temperature. Light conditions were of essential importance for the variations in GPP, while respiration was fueled by both autochthonous and allochthonous organic matter. Constant external input of organic matter resulted in a generally low coupling between GPP and R. A tighter coupling between GPP and R was observed in spring as a result of higher productivity, while a decoupling in autumn was due to intensified allochthonous organic matter runoff caused by rainfall and wind. We found that higher productivity rates in summer did not shift the system to an autotrophic condition and that Peri Lake functioned as a carbon source, light and organic matter being the prime drivers for the metabolic rates.

Linking Shifts in Bacterial Community Composition and Function with Changes in the Dissolved Organic Matter Pool in Ice-Covered Baiyangdian Lake, Northern China

The relationship between CDOM (Chromophoric dissolved organic matter) and the bacterial community was investigated in ice-covered Baiyangdian Lake. The results showed that environmental parameters significantly differed in Baiyangdian Lake, whereas a-diversity was not significantly different. Moreover, the microbial and functional communities exhibited significant differences, and T (Temperature), pH, ORP (Oxidation-reduction potential), DO (Dissolved oxygen), NO₃⁻-N, NH₄⁺-N, and Mn (Manganese) were the main environmental factors of these differences, based on redundancy analysis and the Mantel test. Biomarkers of the microbial and functional communities were investigated through linear discriminant analysis effect size and STAMP analysis. The number of biomarkers in the natural area was highest among the typical zones, and most top functions were related to carbohydrate metabolism. Two protein-like components (C1 and C2) and one humic-like component (C3) were identified by parallel factor analysis, and C1 was positively related to C2 (R = 0.99, p < 0.001), indicating the same sources. Moreover, CDOM significantly differed among the typical zones (p < 0.001). The high biological index, fluorescence index, β:α, and low humification index indicated a strong autochthonous component and aquatic bacterial origin, which was consistent with the results of UV-vis absorption spectroscopy. Network analysis revealed non-random co-occurrence patterns. The bacterial and functional communities interacted closely with CDOM. The dominant genera were CL500-29_marine_group, Flavobacterium, Limnohabitans, and Candidatus_Aquirestis. Random forest analysis showed that C1, C2, and C3 are important predictors of α- and β-diversity in the water bacterial community and its functional composition. This study provides insight into the interaction between bacterial communities and DOM (Dissolved organic matter) in ice-covered Baiyangdian Lake.

Characterization of aquatic organic matter: Assessment, perspectives and research priorities

Organic matter (OM) refers to the largest reactive reservoir of carbon-based compounds on Earth. Aside of its role as a source of carbon, OM is also actively involved in a wide range of ecological functions. It also plays an important role in the solubility, toxicity, bioavailability, mobility and distribution of pollutants. Therefore, OM is a key component in the local and global carbon cycle. About 12,000 articles containing organic matter in the title were published during the past decade, with a continuous increasing number each year (ISI Web of Science). Although this topic was widely explored and its interest has significantly increased, some limitations remain. These limitations can be technical (e.g., pre-treatment processes, low-resolution instrument, data handling) and can be related to the current approach. In this review, we first present the current strategies and tools to characterize the organic matter in the aquatic environment, then we tackle several aspects of current characterization limitations. Finally, we suggest new perspectives and priorities of research to improve the current limitations. From our point of view, simultaneous studies of particulate and dissolved OM fractions should be prioritized and multi-disciplinary approach, creation of databases, controlled experiments and collaborative works should be the next targets for future OM research priorities.