On the hope for biodiversity-friendly tropical landscapes

Impact of Land-Use Change on Vascular Epiphytes: A Review

Human-caused habitat conversion, degradation, and climate change threaten global biodiversity, particularly in tropical forests where vascular epiphytes-non-parasitic plants growing on other plants-may be especially vulnerable. Epiphytes play vital ecological roles, in nutrient cycling and by providing habitat, but are disproportionately affected by land-use changes due to their reliance on host trees and specific microclimatic conditions. While tree species in secondary forests recover relatively quickly, epiphyte recolonization is slower, especially in humid montane regions, where species richness may decline by up to 96% compared to primary or old-growth forests. A review of nearly 300 pertinent studies has revealed a geographic bias toward the Neotropics, with limited research from tropical Asia, Africa, and temperate regions. The studies can be grouped into four main areas: 1. trade, use and conservation, 2. ecological effects of climate and land-use change, 3. diversity in human-modified habitats, and 4. responses to disturbance. In agricultural and timber plantations, particularly those using exotic species like pine and eucalyptus, epiphyte diversity is significantly reduced. In contrast, most native tree species and shade-grown agroforestry systems support higher species richness. Traditional polycultures with dense canopy cover maintain up to 88% of epiphyte diversity, while intensive management practices, such as epiphyte removal in coffee and cacao plantations, cause substantial biodiversity losses. Conservation strategies should prioritize preserving old-growth forests, maintaining forest fragments, and minimizing intensive land management. Active restoration, including the translocation of fallen epiphytes and planting vegetation nuclei, is more effective than passive approaches. Future research should include long-term monitoring to understand epiphyte dynamics and assess the broader impacts of epiphyte loss on biodiversity and ecosystem functioning.

Diversity and Abundance of the Species of Arboreal Mammals in a Tropical Rainforest in Southeast Mexico

Habitat loss threatens biodiversity worldwide being particularly detrimental in tropical rainforests where a cumulative deforestation expands for decades. Tropical rainforests harbor a rich mammal diversity with a wide range of species using different habitats, ranging from forest-dwelling to arboreal species. Recent techniques such as camera trapping have proven to be useful to study the ecology of arboreal mammals. Here, we assessed the overall community structure of arboreal mammals in a protected area by analyzing the patterns of diversity and abundance and their spatial and seasonal variations. A total of 21 camera-trapping stations were set in clusters in three zones. Spatial and seasonal alpha-diversity and community evenness patterns were estimated using Hill's numbers, and Sørensen's dissimilarities were used as a proxy to estimate beta-diversity. A relative abundance index was calculated for each species, at each site and season. To estimate the influence of spatial and tree morphology on arboreal use by mammals, a Principal Component Analysis was performed. We observed a high species richness (14 species) of arboreal mammals. Species richness remained similar between sites, although shifts in abundances and a decreasing gradient in community evenness related to the distance of camera trap station located in each site were noted. We observed a high- and low-diversity dissimilarity between camera trap stations and between zones, respectively. Seasonality showed no significant effect over abundance, alpha, and beta diversities. This protected area holds the natural habitat conditions to ensure the persistence of this rich arboreal mammal community.

How Does Landscape Structure Affect Dung Beetle Assemblages in Amazon Cities?

The growth of cities is one of the main direct and indirect factors responsible for the loss of native vegetation cover. Urbanization directly affects the biological communities inhabiting forest remnants inserted in cities, compromising the maintenance of urban and natural ecosystems. By understanding the effects of landscape transformation due to urbanization, we can have insights regarding the distribution of land uses that allow a proper maintenance of the urban ecosystems. This work assessed the effects of landscape structure variables (forest cover, agricultural area, edge density, and number of forest patches) on dung beetle assemblages and functional groups (i.e., diet and resource removal strategy) sampled in 38 sites located along an urban-rural gradient of six cities belonging to the metropolitan area of Manaus in Central Amazonia. Losses of forest cover were the most determining factor, negatively affecting species richness, abundance, and body size. The increases in agriculture cover negatively affected dung beetle abundance, while edge density positively affected their abundance. The number of forest patches positively affected dung beetle abundances-except for dweller species-and negatively affected the body size of diet-generalist species. These results demonstrate that changes in ecological diversity caused by urbanization are driven mostly by forest cover loss, although forest configuration is important for dung beetle abundance. This study contributes to the understanding of how changes in the amount and distribution of forest cover in tropical cities affect the taxonomic diversity of dung beetle assemblages.

Negative effects of human disturbance and increased aridity on root biomass and nutrients along the regeneration of a tropical dry forest in the context of slash-and-burn agriculture

Biomass is an important indicator of the ability of tropical forests to deliver ecosystem services, but little attention has been given to belowground biomass and its drivers in human-modified landscapes. Here, we investigated the belowground biomass and nutrient concentration/stocks (C, P, and N) across regenerating forest stands with varying ages (10-76 years old) and old-growth forests in the Caatinga dry forest (northeastern Brazil) in the context of slash-and-burn agriculture. Belowground biomass ranged from 1.89 ± 0.33 Mg ha-1 to 17.53 ± 2.28 Mg ha-1 (mean ± SE) across regenerating forest stands and averaged 8.33 ± 1.59 Mg ha-1, with no differences compared to old-growth stands. However, regenerating stands exhibited a higher root/shoot ratio with biomass concentrated in the superficial soil layer and in large-sized roots, regardless of the successional stage. Root nutrient concentration and stocks were highly variable across forest stands with fine roots supporting a higher concentration of N and P, while regenerating stands supported lower nutrient stocks as compared to old-growth forests. Finally, precipitation and chronic disturbance emerged as the most important drivers of belowground biomass and nutrient concentrations/stocks, while aboveground biomass played a negligible role. Our results indicate that, in human-modified landscapes of tropical dry forests, belowground biomass and nutrients play important roles in ecosystem functions in regenerated forests after slash-and-burn agriculture. Forest resilience and provision of ecosystem services (e.g., nutrient cycling) appear to be very sensitive to increased aridity and exploitation of forest resources.

Forest Restoration and the Zoonotic Vector Anopheles balabacensis in Sabah, Malaysia

Anthropogenic changes to forest cover have been linked to an increase in zoonotic diseases. In many areas, natural forests are being replaced with monoculture plantations, such as oil palm, which reduce biodiversity and create a mosaic of landscapes with increased forest edge habitat and an altered micro-climate. These altered conditions may be facilitating the spread of the zoonotic malaria parasite Plasmodium knowlesi in Sabah, on the island of Borneo, through changes to mosquito vector habitat. We conducted a study on mosquito abundance and diversity in four different land uses comprising restored native forest, degraded native forest, an oil palm estate and a eucalyptus plantation, these land uses varying in their vegetation types and structure. The main mosquito vector, Anopheles balabacensis, has adapted its habitat preference from closed canopy rainforest to more open logged forest and plantations. The eucalyptus plantations (Eucalyptus pellita) assessed in this study contained significantly higher abundance of many mosquito species compared with the other land uses, whereas the restored dipterocarp forest had a low abundance of all mosquitos, in particular, An. balabacensis. No P. knowlesi was detected by PCR assay in any of the vectors collected during the study; however, P. inui, P. fieldi and P. vivax were detected in An. balabacensis. These findings indicate that restoring degraded natural forests with native species to closed canopy conditions reduces abundance of this zoonotic malarial mosquito vector and therefore should be incorporated into future restoration research and potentially contribute to the control strategies against simian malaria.

The value of private properties for the conservation of biodiversity in the Brazilian Cerrado

Areas set aside for conservation within private lands may be key to enhancing biodiversity-friendly landscapes. This conservation strategy should be especially effective in highly threatened regions that are poorly protected by public lands, such as the Brazilian Cerrado. Brazil's Native Vegetation Protection Law has included set-aside areas within private properties, but their relevance to conservation has not been evaluated. We assess whether private lands are contributing to biodiversity in the Cerrado, a global biodiversity conservation priority and major region for food production, where land use conflicts are often at odds with conservation objectives. We determined that private protected areas accommodate up to 14.5% of threatened vertebrate species ranges, which increases to 25% when considering the distribution of remaining native habitat. Moreover, the spatial spread of private protected areas benefits a large number of species. Ecological restoration of private protected lands would improve the benefits of this protection system, especially in the Southeastern Cerrado, where a large economic hub meets a threat hotspot.

Accelerated cropland expansion into high integrity forests and protected areas globally in the 21st century

Intact forests and protected areas (PAs) are central to global biodiversity conservation and nature-based climate change mitigation. However, cropland encroachment threatens the ecological integrity and resilience of their functioning. Using satellite observations, we find that a large proportion of croplands in the remaining forests globally have been gained during 2003-2019, especially for high-integrity forests (62%) and non-forest biomes (60%) and tropical forests (47%). Cropland expansion during 2011-2019 in forests globally has even doubled (130% relative increase) than 2003-2011, with high medium-integrity (190%) and high-integrity (165%) categories and non-forest (182%) and tropical forest biomes (136%) showing higher acceleration. Unexpectedly, a quarter of croplands in PAs globally were gained during 2003-2019, again with a recent accelerated expansion (48%). These results suggest insufficient protection of these irreplaceable landscapes and a major challenge to global conservation. More effective local, national, and international coordination among sustainable development goals 15, 13, and 2 is urgently needed.

Landscape-scale forest cover drives the predictability of forest regeneration across the Neotropics

Abandonment of agricultural lands promotes the global expansion of secondary forests, which are critical for preserving biodiversity and ecosystem functions and services. Such roles largely depend, however, on two essential successional attributes, trajectory and recovery rate, which are expected to depend on landscape-scale forest cover in nonlinear ways. Using a multi-scale approach and a large vegetation dataset (843 plots, 3511 tree species) from 22 secondary forest chronosequences distributed across the Neotropics, we show that successional trajectories of woody plant species richness, stem density and basal area are less predictable in landscapes (4 km radius) with intermediate (40-60%) forest cover than in landscapes with high (greater than 60%) forest cover. This supports theory suggesting that high spatial and environmental heterogeneity in intermediately deforested landscapes can increase the variation of key ecological factors for forest recovery (e.g. seed dispersal and seedling recruitment), increasing the uncertainty of successional trajectories. Regarding the recovery rate, only species richness is positively related to forest cover in relatively small (1 km radius) landscapes. These findings highlight the importance of using a spatially explicit landscape approach in restoration initiatives and suggest that these initiatives can be more effective in more forested landscapes, especially if implemented across spatial extents of 1-4 km radius.

Correlates of plant β-diversity in Atlantic Forest patches in the Pernambuco Endemism Centre, Northeastern Brazil

Understanding how vegetation structure and floristic composition vary across landscapes is fundamental to understand ecological patterns and for designing conservation actions. In a patch-landscape approach, we assessed the β-diversity (q0 order – rare species, q1 order – common species, and q2 order – dominant species) of plants between forest patches and surveyed plots in Atlantic Forest patches located in the Pernambuco Endemism Centre, northeastern Brazil. Furthermore, we tested the influence of predictor variables linked to landscape (forest cover and edge density) and habitat (basal area), as well as the geographical distance between forest patches and plots on the β-diversity in each forest patch and plot. We measured and identified a total of 1,682 individuals (trees and lianas), corresponding to 248 species, 116 genera, and 56 families in 10 plots (50 × 2 m) from each forest patch. The β-diversity presented lower values for the Mata de Água Azul patch at a landscape scale (i.e., between forest patches) and Mata dos Macacos patch at a site scale (i.e., between plots) for all orders. Geographical distance positively influenced the β-diversity at the landscape scale, and higher turnover between plots (e.g., within forest patches) was positively associated with differences in geographical distance, edge density, forest cover, and basal area. Our results indicate the need to conserve forest patches distributed across a wide area (distant sites) that encompass different landscape contexts with different vegetation structures, in order to conserve greater floristic diversity.

Climate and forest loss interactively restructure trait composition across a human-modified landscape

Traits determine species response to climate conditions and the match between phenotypes and climate mediates spatial variation in species composition. These trait-climate linkages can be disrupted in human-modified landscapes. Human land use creates forest fragments where dispersal limitation or edge effects exclude species that may otherwise suit a given macroclimate. Furthermore, stressful macroclimate can limit viable trait combinations such that only a subset of values of any given trait occurs with respect to another trait, resulting in stronger trait covariance. Because forest loss can compound climatic stress, trait covariance from benign to harsher climates is expected to be stronger in fragments compared to contiguous forests. In a wet tropical forest landscape in the Western Ghats Biodiversity Hotspot of peninsular India, I compared fragments with adjacent contiguous forests for signatures of trait-mediated assembly of tree communities. Using four key plant traits-seed size, specific leaf area (SLA), wood density, and maximum height-I evaluated trait-abundance associations and trait covariance across climate, soil, and elevation gradients. In the contiguous forest, smaller-seeded, shorter, thinner-leaved species became more abundant from low to high elevations. In fragments, species with higher SLA were more abundant at sites with more seasonal climates and lower precipitation, and larger seeded species were less abundant at warmer sites. However, traits only weakly predicted abundances in both habitats. Moreover, only contiguous forests exhibited significant compositional change via traits, driven by trait syndromes varying along a composite gradient defined by elevation, water deficit, and soil C:N ratio. Site-level trait covariance revealed that warmer, wetter conditions in fragments favored taller species for given seed size, as compared to similar conditions in contiguous forests. Overall, trait syndromes and trait covariance, rather than single traits, determined the phenotypes best suited to macroclimate conditions and should inform management or restoration goals in fragments.

Assessing Landscape Instability through Land-Cover Change Based on the Hemeroby Index (Lithuanian Example)

The increasing anthropogenic impact on landscapes globally has increased interest in assessing landscape naturalness. This study assessed the changes in land cover in Lithuania and identified the most common reasons for land-use change. Coordination of Environment Information (CORINE) land-cover data were used to assess the changes in land cover naturalness in Lithuania from 1995 to 2018. Land-cover types were ranked according to the hemeroby index, ranging from natural landscape with no human impact to anthropogenic landscapes with excessively strong human impact. Land use trends in Lithuania were related to agricultural and forestry activities. During the analysed period, these areas decreased by as much as 11.19%, and the number of areas with a particularly strong impact from human activities also decreased. Land cover naturalness did increase in areas less suitable for agriculture. The impact of human activities on the naturalness of the landscape needs to be explored in detail at the local level, which should be followed by appropriate spatial-planning decisions to ensure ecological balance through as many sustainable solutions as possible, especially with the European Commission adoption the European Green Deal.

Patterns and Driving Factors of Diversity in the Shrub Community in Central and Southern China

Climate, topography, and human activities are known to influence plant diversity. In the present study, species-abundance distribution (SAD) patterns of the shrub community were fitted, and the mechanism of contribution of 22 driving factors was assessed. The results showed that the α-diversity index exhibited no significant differences between artificial disturbance and the natural community. The Zipf and Zipf–Mandelbrot models were found to exhibit a good SAD fitting of the communities, thereby exhibiting a different diversity structure. It was observed that the SAD followed more than one rule, and the Zipf–Mandelbrot model was better than other models. The gradient boosting model indicated that precipitation in the wettest month, annual precipitation, and slope direction showed the strongest impact on plant richness. The indicator species of the artificial disturbance and natural community were identified from a multiple regression tree. Furthermore, an increase in species diversity was observed with a rise in latitude, exhibiting a single-peaked curve with increased altitude. β-diversity analysis indicated that both habitat filtering and the neutral effect influenced the establishment of the natural community, while the establishment of the artificial disturbance community was only affected by habitat filtering. Our study provides a better understanding of the ecological process of the maintenance of shrub-community diversity.

Overcoming biotic homogenization in ecological restoration

Extensive evidence shows that regional (gamma) diversity is often lower across restored landscapes than in reference landscapes, in part due to common restoration practices that favor widespread species through selection of easily-grown species with high survival and propagation practices that reduce genetic diversity. We discuss approaches to counteract biotic homogenization, such as reintroducing species that are adapted to localized habitat conditions and are unlikely to colonize naturally; periodically reintroducing propagules from remnant populations to increase genetic diversity; and reintroducing higher trophic level fauna to restore interaction networks and processes that promote habitat heterogeneity. Several policy changes would also increase regional diversity; these include regional coordination amongst restoration groups, financial incentives to organizations producing conservation-valued species, and experimental designations for rare species introductions.

Functional Traits, Species Diversity and Species Composition of a Neotropical Palm Community Vary in Relation to Forest Age

Understanding the factors that shape the diversity and composition of biotic communities in natural and human-modified landscapes remains a key issue in ecology. Here, we evaluate how functional traits, species diversity and community composition of palm species vary in relation to biogeographic variables and forest age in northwest Ecuador. Functional traits capture essential aspects of species’ ecological tradeoffs and roles within an ecosystem, making them useful in determining the ecological consequences of environmental change, but they have not been used as commonly as more traditional metrics of species diversity and community composition. We inventoried palm communities in 965 10 × 10 m plots arrayed in linear transects placed in forests of varying age. Adult palms in forests of younger regeneration stages were characterized by species with greater maximum stem height, greater maximum stem diameter, and solitary stems. The shift in functional features could indicate that shade tolerant palms are more common in old-growth forest. The shift could also reflect the legacy of leaving canopy palms as remnants in areas that were cleared and then allowed to regrow. Moreover, younger forest age was associated with decreased abundance and altered species composition in both juvenile and adult palms, and decreased species richness in adults. These results highlight the importance of retaining intact, old-growth forest to preserve functional and species diversity and highlight the importance of considering multiple aspects of diversity in studies of vegetation communities.

Assessing assemblage-wide mammal responses to different types of habitat modification in Amazonian forests

Tropical forests are being heavily modified by varying intensities of land use ranging from structural degradation to complete conversion. While ecological responses of vertebrate assemblages to habitat modification are variable, such understanding is critical to appropriate conservation planning of anthropogenic landscapes. We assessed the responses of medium/large-bodied mammal assemblages to the ecological impacts of reduced impact logging, secondary regrowth, and eucalyptus and oil palm plantations in Eastern Brazilian Amazonia. We used within-landscape paired baseline-treatment comparisons to examine the impact of different types of habitat modification in relation to adjacent primary forest. We examined assemblage-wide metrics including the total number of species, number of primary forest species retained in modified habitats, abundance, species composition, and community integrity. We ranked all types of habitat modification along a gradient of assemblage-wide impact intensity, with oil palm and eucalyptus plantations exerting the greatest impact, followed by secondary regrowth, and selectively logging. Selectively-logged and secondary forests did not experience discernible biodiversity loss, except for the total number of primary forest species retained. Secondary forests further experienced pronounced species turnover, with loss of community integrity. Considering the biodiversity retention capacity of anthropogenic habitats, this study reinforces the landscape-scale importance of setting aside large preserved areas.

Altered structure of bat-prey interaction networks in logged tropical forests revealed by metabarcoding

Habitat degradation is pervasive across the tropics and is particularly acute in Southeast Asia, with major implications for biodiversity. Much research has addressed the impact of degradation on species diversity; however, little is known about how ecological interactions are altered, including those that constitute important ecosystem functions such as consumption of herbivores. To examine how rainforest degradation alters trophic interaction networks, we applied DNA metabarcoding to construct interaction networks linking forest-dwelling insectivorous bat species and their prey, comparing old-growth forest and forest degraded by logging in Sabah, Borneo. Individual bats in logged rainforest consumed a lower richness of prey than those in old-growth forest. As a result, interaction networks in logged forests had a less nested structure. These network structures were associated with reduced network redundancy and thus increased vulnerability to perturbations in logged forests. Our results show how ecological interactions change between old-growth and logged forests, with potentially negative implications for ecosystem function and network stability.

Small mammals, ticks and rickettsiae in natural and human-modified landscapes: Diversity and occurrence of Brazilian spotted fever in Brazil

We studied communities of small mammals and their ticks in endemic (E) and non-endemic (NE) areas for Brazilian spotted fever (BSF), aiming to infer if diversity parameters of parasites and hosts could be related to occurrence and prevalence of rickettsial infection, especially Rickettsia rickettsii. We compared E and NE areas in human-modified landscapes (HMLs) and natural areas (BIO) with no report of BSF cases. Composition and equitability were important components of diversity explaining differences among areas. The marsupial Didelphis albiventris was dominant in HMLs, but not in natural areas, and this opossum was the main host for the tick Amblyomma sculptum, principal vector of R. rickettsii, especially in E areas. Communities of ticks were dominated by A. sculptum, followed by Amblyomma dubitatum in E areas. In NE areas, this dominance was inverted, with more A. dubitatum than A. sculptum infesting small mammals, but the numbers of ticks were much lower than in E areas. Composition and abundance of ticks in natural areas were very dissimilar from HMLs, with the lowest tick burdens. Didelphis albiventris in E areas presented higher seroprevalence and endpoint titres against R. rickettsii than in other areas. At least three Rickettsia species, non-pathogenic to humans, were detected in natural areas (Rickettsia bellii, Rickettsia amblyommatis and 'Candidatus Rickettsia andeanae'), and only one non-pathogenic species in HMLs (R. bellii). Our results suggest that higher diversity of ticks, hosts and rickettsiae could be relevant factors in buffering the effect in BSF occurrence. Particularly for D. albiventris, its importance has to be quantified in further studies considering the epidemiological scenario of BSF.

Landscape structure shapes the diversity of tree seedlings at multiple spatial scales in a fragmented tropical rainforest

The maintenance of seedling diversity of animal-dispersed tree species is fundamental for the structure and function of forest patches in fragmented tropical rainforests. Nonetheless, the effects of landscape structure at different spatial scales on α- and β-diversity of tree seedling communities are recently explored. Using a multi-scale approach, we assessed the relative effect of landscape composition and configuration on α- and β-diversity of animal-dispersed seedlings within 16 forest patches in the Lacandona rainforest, Mexico. We assessed these effects at 13 spatial scales (from 300 to 1500 m radius, at 100 m intervals) for three metrics of effective number of species considering α- and β-diversity. We found that α-diversity was largely affected by landscape composition and β-diversity by landscape configuration. On the one hand, the amount of secondary forest influenced α-diversity. Additionally, species richness increased in landscapes with highly aggregated forest patches. On the other hand, β-diversity was affected positively by forest fragmentation and negatively by the edge contrast of forest patches with the surrounding matrix. Our findings indicate that landscape configuration is a strong driver of seedling diversity in highly deforested rainforests. Promoting forest patches and secondary forests through payment for ecosystem services' programs, favoring matrix quality within land-sharing schemes of smallholder agriculture and secondary forest management, and identifying restoration opportunities for assisted or unassisted natural regeneration are urgently needed for conservation of seedling diversity in human-modified tropical landscapes.

Small Landscape Elements Double Connectivity in Highly Fragmented Areas of the Brazilian Atlantic Forest

The Atlantic Forest in Brazil is a biodiversity hotspot, yet its diverse ecosystems and species are becoming increasingly threatened by habitat loss and extreme habitat fragmentation. Most habitat patches of Atlantic Forest are dispersed across agricultural landscapes (e.g., grazing and cropping) in relatively small and isolated fragments (80% < 50 ha). Forest fragments < 1 ha, scattered trees in pastures, tree lines on trenches and fences, and remnant riparian forest, collectively called here Small Landscape Elements (SLEs), are very common in this context. While these SLEs make up much of the Atlantic Forests footprint, very little is known about their role or impact on the persistence and conservation of species. In this study, we investigate the role of SLEs on landscape configuration, particularly their contribution toward landscape connectivity of individual species and the genetic flow of species between larger forest fragments. We randomly selected 20 buffers of 707 hectares within a 411,670 hectare area of the Atlantic Forest that was completely covered by forest in the past located in the south of Minas Gerais State, Brazil. The forest cover randomly varied between these buffers. We used graph theory to measure landscape connectivity as the probability of connectivity for different disperser movement types between landscape knots (habitat patches). We used three estimated dispersal distances in the models: pollen disperser insect (50 m), low-mobility seed disperser bird (100 m) and high-mobility seed disperser bird (760 m). The SLEs together increased the probability of connection by roughly 50%, for all model dispersers, if compared to a theoretical baseline landscape containing no SLEs. Of all SLEs, riparian forests contribute the most toward enhancing landscape connectivity. In these highly fragmented landscapes, such as the Atlantic Forest (>70%), the position of SLEs within the landscapes was more important than their respective areas for connectivity. Although the landscapes were deeply fragmented, we showed that the presence of SLEs can increase connectivity and reduce further biodiversity loss in the Atlantic Forest.

Extensive clonal propagation and resprouting drive the regeneration of a Brazilian dry forest

Woody plant resprouting has received considerable attention in the last two decades as human disturbances continue to encroach on terrestrial ecosystems globally. We examined the regeneration mechanisms of a Caatinga dry forest in the context of slash-and-burn agriculture and resprouting ability of the local flora. We excavated two old fields (from 32) experiencing early forest regeneration dominated by the tree Pityrocarpa moniliformis (Fabaceae) to map clonal propagation and, in parallel, submitted 260 seedlings from 13 woody plant species to experimental clipping. What seemed to be ‘seedlings’ popping up around P. moniliformis stumps and remaining adults actually were condensed sets of root suckers connected via complex networks of long, ramified shallow horizontal roots without taproots. We mapped respectively 39 and 783 connected root suckers, which summed 96 m and 910 m in root length. Regarding the seedlings, 33% resprouted across nine species with resprouting rates varying between 5–100%. Seedling height before clipping positively influenced resprouting vigour. Our preliminary results suggest that the Caatinga dry forest supports a relatively high proportion of resprouting species, some of them able to clonally propagate and playing an ecosystem-level role by responding to early forest regeneration and high abundance/biomass across both regenerating and old-growth forests.

Winner-Loser Species Replacements in Human-Modified Landscapes

Community assembly arguably drives the provision of ecosystem services because they critically depend on which and how species coexist. We examine conspicuous cases of 'winner and loser' replacements (WLRs) in tropical forests to provide a framework integrating drivers, impacts on ecological organization, and reconfiguration of ecosystem service provisioning. Most WLRs involve native species and result from changes in resource availability rather than from altered competition among species. In this context, species dispersal is a powerful force controlling community (re)assembly. Furthermore, replacements imply a nearly complete functional reorganization of assemblages and new 'packages' of ecosystem services and disservices provided by winners. WLRs can thus elucidate the multiple transitions experienced by tropical forests, and have theoretical/applied implications, including the role that human-modified landscapes may play in global-scale sustainability.

Big trees drive forest structure patterns across a lowland Amazon regrowth gradient

Degraded Amazonian forests can take decades to recover and the ecological results of natural regeneration are still uncertain. Here we use field data collected across 15 lowland Amazon smallholder properties to examine the relationships between forest structure, mammal diversity, regrowth type, regrowth age, topography and hydrology. Forest structure was quantified together with mammal diversity in 30 paired regrowth-control plots. Forest regrowth stage was classified into three groups: late second-regrowth, early second-regrowth and abandoned pasture. Basal area in regrowth plots remained less than half that recorded in control plots even after 20–25 years. Although basal area did increase in sequence from pasture, early to late-regrowth plots, there was a significant decline in basal area of late-regrowth control plots associated with a decline in the proportion of large trees. Variation in different forest structure responses was explained by contrasting variables, with the proportion of small trees (DBH < 20 cm) most strongly explained by topography (altitude and slope) whereas the proportion of large trees (DBH > 60 cm) was explained by plot type (control vs. regrowth) and regrowth class. These findings support calls for increased efforts to actively conserve large trees to avoid retrogressive succession around edges of degraded Amazon forests.

Food availability, plant diversity, and vegetation structure drive behavioral and ecological variation in Endangered Coimbra-Filho's titi monkeys

There is wide variability in primate behavior and ecology. Understanding how frugivorous primates behave under different habitat fragmentation levels is key for effective conservation and management of species and their habitats. We evaluated the seasonality in activity budget, diet, and ranging behavior of two groups of Endangered Coimbra-Filho's titi monkeys (Callicebus coimbrai). One group inhabited a 14-ha forest fragment, whereas the other lived in a 522-ha fragment. We measured the monthly density of trees and lianas available as food sources over 8 months. We also collected behavioral and group location data every 5 min, from dawn to dusk, using the scan sampling method. The two forest fragments differed seasonally in the number of fruiting food-resource available. In the 14-ha fragment, we found that the time spent by titi monkeys feeding, foraging, resting, and traveling differed seasonally. In the 522-ha fragment, titi monkeys exhibited seasonal differences in time spent sleeping, socializing, foraging, and revisiting food sources. In both titi monkey groups, diets varied seasonally. Our findings indicate that Coimbra-Filho's titi monkeys can exhibit behavioral flexibility in their activity budgets, diets, and movement patterns. Such flexibility is important for this species to survive in fragmented habitats and may be linked to three key factors: species-specific resource availability, plant species diversity, and the vegetation structure of each forest fragment.

Human-modified landscapes alter home range and movement patterns of capybaras

The expansion of human activity forces species to co-exist with people in human-modified landscapes (HMLs). However, living in HMLs demands behavioral adaptations, and the proximity between wildlife and people heightens human–wildlife conflicts. Capybara (Hydrochoerus hydrochaeris) is a thriving rodent species in HMLs in Brazil and as such, is involved in human–wildlife conflicts, such as vehicle collisions and transmission of Brazilian spotted fever (BSF). Despite their public importance, the effects of HMLs on capybara movement behavior have never been investigated. Our study aimed to investigate changes in home range, ranging pattern, and activity, for capybaras in six HMLs and two natural landscapes (NLs) by monitoring capybaras with GPS collars. We found home ranges 2.43 times greater in NLs than in HMLs and differences in ranging pattern in HMLs. Capybaras tended to be more nocturnal and move shorter distances across HMLs than NLs. Our results confirm the impacts of the HMLs altering capybara movement. The aggregation of capybaras in very small home ranges might imply on greater risks of tick infestations. In addition, capybara–vehicle collision may be increased during capybaras’ nocturnal activity. Therefore, we recommend that transportation agencies avoid the construction of transportation infrastructures (roads, railways, airstrips) in capybaras’ home ranges, which should be of restricted access to people in BSF endemic areas.

Fostering a Wildlife-Friendly Program for Sustainable Coffee Farming: The Case of Small-Holder Farmers in Indonesia

There is an urgent need for a global transition to sustainable and wildlife-friendly farming systems that provide social and economic equity and protect ecosystem services on which agriculture depends. Java is home to 60% of Indonesia’s population and harbors many endemic species; thus, managing agriculture alongside human well-being and biodiversity is vital. Within a community of ~400 coffee farmers in the province of West Java, we assessed the steps to develop a wildlife-friendly program until reaching certification between February 2019 and October 2020. We adopted an adaptive management approach that included developing common objectives through a process of stakeholder consultation and co-learning. We firstly investigated via interviews the expectations and the issues encountered by 25 farmers who converted to organic production in 2016. Their main expectations were an increase in income and an increase in coffee quality, while they had issues mainly in finding high quality fertilizers, reducing pests, and increasing productivity. We used this information to establish a problem-solving plan for the transition to community-wide wildlife-friendly practices. As part of the adaptive evaluation, we assessed the quality of coffee plantations before and after the implementation of coproduced actions. The quality of coffee significantly improved after our interventions to reduce the coffee berry borer, especially in the fields that started as inorganic and converted to organic. We uncovered additional issues to meet the standards for certification, including banning hunting and trapping activities and increasing coffee quality for international export. We describe the coproduced actions (agroforestry, conservation education, local law, organic alternatives) and phases of the program and discuss the potential barriers. We provide novel evidence of adaptive management framework successfully used to implement management actions and reach shared goals.

Mechanisms of diversity maintenance in dung beetle assemblages in a heterogeneous tropical landscape

Background

Anthropized landscapes play a crucial role in biodiversity conservation, as they encompass about 90% of the remaining tropical forest. Effective conservation strategies require a deep understanding of how anthropic disturbances determine diversity patterns across these landscapes. Here, we evaluated how attributes and assembly mechanisms of dung beetle communities vary across the Selva El Ocote Biosphere Reserve (REBISO) landscape.

Methods

Community attributes (species diversity, abundance, and biomass) were assessed at the landscape scale, using spatial windows and vegetation classes. Windows were categorized as intact, variegated, or fragmented based on their percent cover of tropical forest. The vegetation classes analyzed were tropical forest, second-growth forest, and pastures.

Results

We collected 15,457 individuals and 55 species. Variegated windows, tropical forests, and second-growth forests showed the highest diversity values, while the lowest values were found in intact windows and pastures. Landscape fragmentation was positively and strongly related to dung beetle diversity and negatively related to their abundance; biomass was positively associated with forest cover. Beta diversity was the primary driver of the high dung beetle diversity in the landscape analyzed.

Discussion

The landscape heterogeneity and its biodiversity-friendly matrix facilitate the complementarity of dung beetle assemblages in the Selva El Ocote Biosphere Reserve. Random processes govern beta diversity patterns in intact and variegated windows. Therefore, vegetation cover in the region is sufficient to maintain a continuous flow of dung beetles between forested landscape segments. However, intense anthropic disturbances acted as deterministic environmental filters in fragmented windows and pastures sites, leading to biotic homogenization processes. Our results suggest that increasing habitat variegation in highly fragmented sites is an effective strategy to prevent or buffer homogenization processes in the REBISO landscape.

Land-Use and Health Issues in Malagasy Primary Education—A Delphi Study

Education for Sustainable Development (ESD) plays a key role in Sustainable Development. In low-income countries like Madagascar, this key role is particularly relevant to primary education. However, the curricula lack a comprehensive ESD approach that incorporates regional issues. In Madagascar, sustainable land-use practices (Sustainable Development Goals 12, 15) and health prevention (SDGs 2, 3, 6) are educational challenges. Procedural knowledge allows problem-solving regarding unsustainable developments. We adapted and further developed a measure of ESD-relevant procedural knowledge. Considering curricula, sustainability standards, research, and a two-round Delphi study (n = 34 experts), we identified regionally relevant land-use practices and health-protective behavior. After the experts rated the effectiveness and possibility of implementation of courses of actions, we calculated an index of what to teach under given Malagasy (regional) conditions. Combined with qualitative expert comments, the study offers insights into expert views on land-use and health topics: For example, when teaching ESD in Northeast Madagascar, sustainable management of cultivation and soil is suitable, particularly when linked to vanilla production. Health-protective behavior is ultimately more difficult to implement in rural than in urban areas. These results are important for further curricula development, for ESD during primary education, and because they give insights into the topics teacher education should address.

Designing optimal human-modified landscapes for forest biodiversity conservation

Agriculture and development transform forest ecosystems to human-modified landscapes. Decades of research in ecology have generated myriad concepts for the appropriate management of these landscapes. Yet, these concepts are often contradictory and apply at different spatial scales, making the design of biodiversity-friendly landscapes challenging. Here, we combine concepts with empirical support to design optimal landscape scenarios for forest-dwelling species. The supported concepts indicate that appropriately sized landscapes should contain ≥ 40% forest cover, although higher percentages are likely needed in the tropics. Forest cover should be configured with c. 10% in a very large forest patch, and the remaining 30% in many evenly dispersed smaller patches and semi-natural treed elements (e.g. vegetation corridors). Importantly, the patches should be embedded in a high-quality matrix. The proposed landscape scenarios represent an optimal compromise between delivery of goods and services to humans and preserving most forest wildlife, and can therefore guide forest preservation and restoration strategies.

Second-growth and small forest clearings have little effect on the temporal activity patterns of Amazonian phyllostomid bats

Secondary forests and human-made forest gaps are conspicuous features of tropical landscapes. Yet, behavioral responses to these aspects of anthropogenically modified forests remain poorly investigated. Here, we analyze the effects of small human-made clearings and secondary forests on tropical bats by examining the guild- and species-level activity patterns of phyllostomids sampled in the Central Amazon, Brazil. Specifically, we contrast the temporal activity patterns and degree of temporal overlap of 6 frugivorous and 4 gleaning animalivorous species in old-growth forest and second-growth forest and of 4 frugivores in old-growth forest and forest clearings. The activity patterns of frugivores and gleaning animalivores did not change between old-growth forest and second-growth, nor did the activity patterns of frugivores between old-growth forest and clearings. However, at the species level, we detected significant differences for Artibeus obscurus (old-growth forest vs. second-growth) and A. concolor (old-growth forest vs. clearings). The degree of temporal overlap was greater than random in all sampled habitats. However, for frugivorous species, the degree of temporal overlap was similar between old-growth forest and second-growth; whereas for gleaning animalivores, it was lower in second-growth than in old-growth forest. On the contrary, forest clearings were characterized by increased temporal overlap between frugivores. Changes in activity patterns and temporal overlap may result from differential foraging opportunities and dissimilar predation risks. Yet, our analyses suggest that activity patterns of bats in second-growth and small forest clearings, 2 of the most prominent habitats in humanized tropical landscapes, varies little from the activity patterns in old-growth forest.

Patterns of biodiversity response along a gradient of forest use in Eastern Amazonia, Brazil

The preservation of tropical forests is increasingly at risk, including forests located within human-modified landscapes that retain high conservation value. People modify and interact with these landscapes through a wide range of uses. However, our knowledge of how different forest uses affect biodiversity is limited. Here, we analyse the responses of different taxa to four distinct categories of forest management, namely old-growth forest, Brazil nut extraction areas, reduced impact logging areas, and eucalyptus plantations. Within six independent replicates of each category, we sampled three taxa (fruit-feeding butterflies, dung beetles, and trees) in eastern Amazonia. Forests under moderate use (Brazil nut extraction and reduced-impact logging) had similar, albeit slightly lower, diversity levels relative to old-growth forests, while communities in plantations were significantly less diverse. Only 4%, 20%, and 17%, of the sampled butterfly, dung beetle, and tree species, respectively, were restricted to old-growth forests. This study provides further empirical evidence of the importance of old-growth forest conservation in the context of human-modified landscapes. It also suggests that landscape matrices integrating forest uses at varying intensities are well positioned to reconcile biodiversity conservation with the production of goods that support local livelihoods.

Contrasting the Effect of Forest Landscape Condition to the Resilience of Species Diversity in a Human Modified Landscape: Implications for the Conservation of Tree Species

Using landscape moderation insurance and Intermediate Disturbance Hypothesis (IDH) as frameworks, this study assessed the response of local assemblage among different land use regimes (mean β-diversity), using the Jaccard dissimilarity matrix in contrasting Human Modified Forest Landscapes (HMFLs). The study was conducted at the relatively simplified Mafhela Forest Reserve and the complex Thathe Vondo Forest Reserve in South Africa. The patterns of overall β-diversity between HMFL and State-protected Indigenous Forests (SIF) were compared and the leading change drivers were then untangled. This study found that human disturbance affects mean β-diversity of local assemblages among land use regimes between the two HMFLs in an ecologically contrasting manner. The HMFL in Mafhela Forest Reserve had distinct local assemblages among land use regimes and did not conform to the expectation of IDH. On average, HMFL had the same average local species richness as SIF, mainly due to change in species composition (species replacement) induced by land use disturbance. Land use intensity gradient was the leading change driver to explain the overall β-diversity of the Mafhela Forest Reserve. The findings in the Thathe Vondo Forest Reserve were in contrast with the Mafhela Forest Reserve. Although on average the HMFL had the same local species richness as SIFs, this was mainly due to a trade-off of species gain in trees along the rivers and streams and species loss in Culturally Protected Areas (sacred forests) (CPA) as expected by IDH. The contrasting findings imply that the effectiveness of any alternative conservation strategy is context-dependent. The resilience of local assemblages and conservation value of HMFL depends on the condition of the overall forest landscape complexity and cannnot be captured by one theory, nor by one species diversity matrix (e.g., β-diversity or Richness). It thus demands the application of complementary theoretical frameworks and multilevel modeling.

Edge effects reduce α-diversity but not β-diversity during community assembly in a human-modified tropical forest

Edge effects can alter the spatial organization of diversity in fragmented habitats. For tropical forests, however, there has been large variation in the strength and direction of such effects reported by different studies. For long-lived organisms like trees, one reason for inconsistent patterns might be due to most studies having examined patterns of diversity and compositional variation in older life stages that bear the legacy of a forest past. Younger life stages can reveal ongoing processes of assembly, but multi-stage examinations are rare. For seedling, sapling, and adult life stages of trees in a human-modified wet tropical forest in the Western Ghats Biodiversity Hotspot (India), we examined how proximity to forest edges (edge influence) modified the spatial organization of diversity. Specifically, for each life stage we tested whether edge influence led to loss of α- and γ-diversity and decreased β-diversity in this landscape. We found lower α- and γ-diversity closer to forest edges, but only for seedlings. Seedling composition at 90-100 m from forest edges diverged from composition of sites within 60 m, suggesting that edge influence restricted the recruitment of some species to interior sites. In contrast, β-diversity was greater near edges than interior forest for all life stages and most prominently for seedlings. Furthermore, β-diversity at edges was primarily driven by species turnover, suggesting either marked species-environment associations or dispersal limitation. Low turnover at 90-100 m implies that β-diversity arose from stochastic fluctuations in occurrences and abundances of the same species set. Overall, we find that high β-diversity structured spatial patterns of diversity near edges, but recruitment bottlenecks are likely to reduce alpha diversity of forest fragments. Our results also corroborate the need to maintain sufficiently large areas of tropical forest free from edge effects to avoid the loss of interior forest species. To improve landscape-scale diversity of fragmented landscapes, restoration efforts should focus on recovery of species that are unable to regenerate near forest edges.

The effects of habitat loss and fragmentation on plant functional traits and functional diversity: what do we know so far?

Habitat loss and fragmentation result in significant landscape changes that ultimately affect plant diversity and add uncertainty to how natural areas will respond to future global change. This uncertainty is important given that the loss of biodiversity often includes losing key ecosystem functions. Few studies have explored the effects of landscape changes on plant functional diversity and evidence so far has shown far more pervasive effects than previously reported by species richness and composition studies. Here we present a review on the impact of habitat loss and fragmentation on (1) individual functional traits-related to persistence, dispersal and establishment-and (2) functional diversity. We also discuss current knowledge gaps and propose ways forward. From the literature review we found that studies have largely focused on dispersal traits, strongly impacted by habitat loss and fragmentation, while traits related to persistence were the least studied. Furthermore, most studies did not distinguish habitat loss from spatial fragmentation and were conducted at the plot or fragment-level, which taken together limits the ability to generalize the scale-dependency of landscape changes on plant functional diversity. For future work, we recommend (1) clearly distinguishing the effects of habitat loss from those of fragmentation, and (2) recognizing the scale-dependency of predicted responses when functional diversity varies in time and space. We conclude that a clear understanding of the effects of habitat loss and fragmentation on functional diversity will improve predictions of the resiliency and resistance of plant communities to varying scales of disturbance.

Mammals of medium and large size in Cerrado remnants in southeastern Brazil

The Cerrado is the second largest biome in Brazil and considered a global biodiversity hotspot due to its high species richness, elevated amount of endemisms, and several anthropogenic threats. The Cerrado has more than 250 species of mammals, and about 15% are endemic. However, fragmentation and the consequent loss of native habitat threaten the maintenance of mammalian populations. In this context we carried out an inventory of medium- and large-sized mammals in Cerrado remnants in Matutina, Minas Gerais, southeastern Brazil. Sampling was performed in four remnants of Cerrado and adjacent agricultural matrices for 18 days and 16 nights in March and July 2015 with camera traps, diurnal and nocturnal censuses, and by searching for tracks and other indirect evidence. We recorded 19 species of mammals, including top predators and species vulnerable to extinction. The original vegetation cover in the study area has become severely reduced and fragmented due to agricultural expansion. However, the remnants still retain considerable diversity of medium- and large-sized mammals, making them important for the maintenance of biological diversity.