Organic carbon preservation in wetlands: Iron oxide protection vs. thermodynamic limitation

Mechanism deciphering of variation of soluble organic carbon storage during the sedimentary period in lacustrine sediments

Stable organic carbon (OC) burial into lacustrine sediments was the important C fixation path for atmospheric C reduction. However, OC retention effect and stability mechanisms in sediments was still unclear at the molecular scale during the burial period. Chronology and OC fractions were measured for the sediments from two freshwater lakes. Three-dimensional fluorescence and Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) were used to detect the change in the forms and molecular structure of soluble OC (SOC). Remarkably increasing TOC and total nitrogen (TN) concentrations along with the decreasing TOC/TN (C/N) values upwards occurred in the sediment columns indicated the weakened terrigenous OC and N inputs from about the 1980s. The OC mineralization contributed to the decrease of C burial in deeper sedimentary layers. However, higher SOC concentrations was found in deeper depths, suggesting that SOC facilitated the OC accumulation and fixation in the sediments and triggered the higher OCBR values over time. Additionally, obvious fluorescence intensity existence throughout the the whole sediment cores suggested the synchronous accumulation of both humic acid-like and fulvic acid-like materials over time as dominant SOC fractions. Higher fluorescence intensity at upper sediment layers indicated the SOC burial as humic acid-like materials with stronger sequestration potential. The persistence of fluorescence signal suggested that fulvic acid-like materials dominated the SOC immobilization and resistance to mineralization in the sediments. Finally, FT-ICR-MS analysis showed that remarkable accumulation of lipids with abundances from 31 to 44 % of organics was attributed to the decomposition of lignins and dominated CHO and CHON formulas and OC compounds. Lipids and lignins with higher abundances dominated the SOC burial and fixation over time even though mineralization occurred. Our work testified that lipids and lignins contributed to the majority of humic acid-like materials and subsequent OC retention in the lacustrine sediments at the geological time scale.

Making waves: Reevaluating iron dosing for carbon recovery in mainstream wastewater treatment system

Wastewater treatment plants face significant challenges in shifting from energy-intensive operations to carbon-neutral, energy-efficient systems. One promising strategy is the iron-enhanced primary treatment process (Fe-CEPT), which focuses on capturing organic carbon for energy recovery rather than biological oxidation. However, while Fe-CEPT has been implemented in wastewater treatment, its potential effects on downstream processes have often been overlooked. This viewpoint takes a comprehensive look at iron dosing for carbon recovery in mainstream wastewater treatment systems. Fe-CEPT has proven effective at capturing particulate organics and phosphorus. However, it is less successful in removing soluble organic carbon. Additionally, the high iron content in sludge, typically between 100 to 200 mg Fe/g SS, has been shown to severely inhibit methane production. This finding contrasts with earlier studies that suggested iron could enhance methane production. It was found the elevated iron levels bind around 20 % of the carbon in the sludge, limiting its bioavailability. These findings indicate that coupling Fe-CEPT with anaerobic digestion may not be an effective method for carbon recovery. A more promising approach that involves limiting iron dosing to less than 10 mg Fe/L in a high-rate activated sludge (HRAS) system is proposed. This strategy combines the benefits of iron dosing and HRAS system, offering a potential pathway to enhance carbon recovery, improve phosphorus management, and reduce the environmental impact of wastewater treatment processes.

Intensified human activities shape the dynamics of sediment organic matter in a highly-disturbed estuary

Human activities have significantly altered organic matter dynamics in marine sediments. However, the long-term consequences of these alterations on organic matter within estuarine environments remain ambiguous. This study examines the sustained sediment organic matter (SeOM) dynamics in the anthropogenically disturbed Pearl River Estuary (PRE) spanning terrestrial (T), fresh-seawater mixing (M), and marine (S) zones, with an emphasis on the effects of human activities. Sediment cores (210Pb) were utilized to analyze physicochemical parameters, including total organic carbon (TOC), total nitrogen (TN), isotopic compositions (δ13C and δ15N), and fluorescence signatures of sediment dissolved organic matter, which includes humic-like components (C1, C2, and C3) and protein-like components (C4, C5, and C6). The results reveal that within the T zone, total organic carbon (TOC: 0.79∼1.22 %), total nitrogen (TN: 0.081∼0.123 %), and δ15N values (4.03∼6.60 ‰) exhibited an increasing trend, while δ13C values (-24.89 ∼ -24.57 ‰), C1 content (28.97∼32.64 %), and humification index (HIX: 0.60∼0.83) displayed a decreasing trend. These patterns collectively indicate a decline in terrestrial organic matter inputs and a concurrent rise in contributions from anthropogenic sources, such as domestic wastewater discharge. In the M zone, TOC content (0.67∼1.14 %) and TN content (0.07∼0.10 %) exhibited a decrease trend; however, the gradual reduction in the C/N ratio (9.94∼12.38) implies a slower decline in TN relative to organic carbon. Furthermore, C1 content (20.43∼28.69 %), C6 content (0.42∼30.35 %), and HIX value (0.51∼0.78 %) diminished after 1980, indicating a decrease in terrestrial sources and a substantial increase in anthropogenic influence. In the S zone, the C/N ratio (7.71∼8.77) remained relatively stable prior to 1980; however, a significant decline in terrestrial inputs was noted after 1980, particularly following 2000. Human-induced terrestrial alterations and domestic discharge have a substantial impact on the preservation of SeOM within the PRE, particularly in the T and M zones. The increase in Fe (III) within the T zone significantly enhances the content of SeOM; however, intensified anthropogenic activities compromise its preservation capacity. This study offers critical insights into the dynamics of SeOM within a significantly disturbed estuary over the past four decades, underscoring the potential effects of intensified human activities on the preservation of SeOM in estuarine ecosystems.

Elevated methylmercury production in seasonally inundated sediments: Insights from DOM molecular composition

Seasonally inundated areas (SIA) within aquatic systems are characterized by elevated methylmercury (MeHg) production. Nevertheless, the response characteristics of dissolved organic matter (DOM) quality in SIA sediments, including its molecular compositions and structure, and their impacts on the MeHg production are not yet fully understood. This research gap has been addressed through field investigations and microcosm experiments conducted in a metal-polluted plateau wetland. The results revealed that DOMSIA had lower levels of chromophoric DOM concentrations, protein-like fractions, molecular complexity, and debris size while exhibiting higher humic-like fractions, molecular weight, COO- groups, and bioavailability than DOM in permanently inundated areas (PIA). Compared with DOMPIA, DOMSIA was more easily biodegraded, and exhibited a higher adsorption capacity while lower binding affinity for Hg(Ⅱ). Moreover, MeHg synthesis by Desulfomicrobium escambiense was 29.6-fold higher in DOMSIA than that in DOMPIA, and DOMSIA amendment also resulted in a higher MeHg production in the sediment. The PLS-PM model demonstrated that DOM compositions positively showed high contributions to MeHg levels in sediment porewater (0.51), while binding affinity had a negative pattern (-0.83), but adsorption capacity had a lower contribution (0.09). These findings provide an updated explanation for the elevated MeHg level in the SIA of aquatic systems, which are closely related to the adaptive response of DOM molecular composition and structure in the sediment.

Immobilization or mobilization of heavy metal(loid)s in lake sediment-water interface: Roles of coupled transformation between iron (oxyhydr)oxides and natural organic matter

Iron (Fe) (oxyhydr)oxides and natural organic matter (NOM) are active substances ubiquitously found in sediments. Their coupled transformation plays a crucial role in the fate and release risk of heavy metal(loid)s (HMs) in lake sediments. Therefore, it is essential to systematically obtain relevant knowledge to elucidate their potential mechanism, and whether HMs provide immobilization or mobilization effect in this ternary system. In this review, we summarized (1) the bidirectional effect between Fe (oxyhydr)oxides and NOM, including preservation, decomposition, electron transfer, adsorption, reactive oxygen species production, and crystal transformation; (2) the potential roles of coupled transformation between Fe and NOM in the environmental behavior of HMs from kinetic and thermodynamic processes; (3) the primary factors affecting the remediation of sediments HMs; (4) the challenges and future development of sediment HM control based on the coupled effect between Fe and NOM from theoretical and practical perspectives. Overall, this review focused on the biogeochemical coupling cycle of Fe, NOM, and HMs, with the goal of providing guidance for HMs contamination and risk control in lake sediment.

Increased Mineral-Associated Organic Carbon and Persistent Molecules in Allochthonous Blue Carbon Ecosystems

Coastal wetlands contain very large carbon (C) stocks-termed as blue C-and their management has emerged as a promising nature-based solution for climate adaptation and mitigation. The interactions among sources, pools, and molecular compositions of soil organic C (SOC) within blue C ecosystems (BCEs) remain elusive. Here, we explore these interactions along an 18,000 km long coastal line of salt marshes, mangroves, and seagrasses in China. We found that mineral-associated organic C (MAOC) is enriched in BCEs dominated by allochthonous inputs and abundant active minerals, leading to an increased proportion of persistent organic molecules. Specifically, soils with large allochthonous inputs (> 50%) are characterized by a substantial contribution of MAOC (> 70%) to total SOC with a notable preservation of lipids (36%) across salt marshes, mangroves, and seagrasses. The burial of allochthonous particles, derived from external sources such as rivers or tidal influxes, facilitates the formation of stable MAOC through binding to mineral surfaces or occlusion within microaggregates. The proportions of particulate organic C (POC) and MAOC are important predictors for molecular compositions of soil organic matter. Lipid proportions within molecular composition decrease as POC and autochthonous C proportions increase. These findings provide new insights into the coupled control over SOC sequestration in BCEs, emphasizing the role of allochthonous inputs, proportions of carbon pools, and persistent organic components.

Molecular insight into algae-derived dissolved organic matters via Fourier-transform ion cyclotron resonance mass spectrometry: Effects of pretreatment methods and electrospray ionization modes

The release of algae-derived dissolved organic matter (ADOM) significantly increased in serious eutrophication waters, posing great threats to drinking water safety. Thus, the molecular composition decipherment is urgently in need. However, due to unsatisfactory pretreatment and ionization effects, the application of Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) on ADOM was limited. Therefore, the effects of pretreatment methods (cartridge type and loading) during solid-phase extraction (SPE) and electrospray ionization (ESI) modes with FT-ICR-MS on the molecular composition of ADOM were evaluated. The results showed compared with silica-based octadecyl (C18) cartridge, styrene-divinylbenzene polymer (PPL) cartridge exhibited higher recovery efficiency and retained more saturated and oxygenated compounds, such as carbohydrate-like and tannin-like. Furthermore, the recovery efficiency decreased with increasing loading, and hydrophilic and high-oxygenated carbohydrate-like and tannin-like were continuously replaced by hydrophobic and low-oxygenated aliphatic and aromatic compounds. Moreover, compared to negative ESI mode, the addition of positive ESI mode increased the molecular chemodiversity, especially more lipid-like and protein-like compounds. Thus, we proposed < 1:500 DOC/PPL mass ratio during SPE and dual ESI modes coupled with FT-ICR-MS could identify ADOM molecules more comprehensively. This work contributes to more comprehensive understanding of the molecular composition of ADOM and provides more references for pretreatment and characterization strategies of severely eutrophic waters.

Critical role of soil-applied molybdenum dioxide composite biochar material in enhancing Cr(VI) remediation process: The driver of Fe(III)/Fe(II) redox cycle

Heavy metal contamination of agricultural land due to sewage irrigation, over-application of fertilizers and pesticides, and industrial activities. Biochar, due to its rich functional groups and excellent electrochemical performance, is used for the remediation of heavy metal-contaminated farmland. However, the remediation mechanism remains uncertain due to the influence of minerals and multi-element composite pollution on soil. Therefore, introducing transition metal oxide MoO2 to prepare biochar composite remediation materials enhances the adsorption and reduction of soil Cr (Ⅵ). This study compared the differences in Cr (Ⅵ) improvement under different pollution systems and pH conditions and explored the potential mechanism of Fe (Ⅲ)/Fe (Ⅱ) redox cycling in Cr (Ⅵ) remediation. The results showed that both biochar MoO2 ball-milling composite (BC + M) and biochar-loaded MoO2 (BC/M) retained the original biochar (BC) remediation method for Cr (Ⅵ). Among them, the remediation of BC/M was the most stable, with the maximum remediation value ranging from approximately 6.52 to 58.58 mg/kg. In different pollution systems, Cd and Pb exhibited competitive adsorption toward Cr (Ⅵ), but they enhanced Cr (Ⅵ) remediation by promoting adsorption and self-complexation. In acidic conditions (pH = 4), BC/M showed the best remediation effect, with a reduction kinetic constant of 34.61 × 10-3 S-1 and a maximum adsorption capacity of 61.64 mg/g. Fe (Ⅲ)/Fe (Ⅱ) redox cycling accelerated the reduction of Cr (Ⅵ) (R2 = 0.81), and MoO2 promoted the Fe (Ⅲ)/Fe (Ⅱ) redox cycle. BC/M enhanced the Fe (Ⅱ) formation efficiency by 66.39% and 71.81% compared to BC + M and BC at pH = 4. The introduction of MoO2 and biochar composite materials enhanced the reduction process of Cr (Ⅵ), with BC/M achieving the optimal remediation level. This study reveals the potential mechanisms of MoO2 and biochar composite materials in soil Cr (Ⅵ) remediation, providing a reference and insight for the preparation of Cr (Ⅵ) remediation materials and the treatment of contaminated farmland.

Divergent contributions of microbes and plants to soil organic carbon in the drawdown area of a large reservoir: Impacts of periodic flooding and drying

The distribution patterns and accumulation mechanisms of plant and microbial residues, along with their potential contributions to soil organic carbon (SOC), remain subjects of considerable debate, particularly within drawdown areas affected by reservoir operation. In this study, surface soil samples (0-10 cm) were collected from three different elevations within the drawdown area of the Three Gorges Reservoir. Amino sugars and lignin phenols served as biomarkers for microbial residues and plant-derived materials, respectively. The results revealed that with increasing duration of flooding, the content of amino sugars increased from 0.26 mg g-1 to 0.64 mg g-1, whereas the content of lignin phenols decreased from 204.09 mg kg-1 to 37.93 mg kg-1. Moreover, as the duration of flooding increased, the contribution of microbial necromass carbon (MNC) to SOC rose from 29% to 47%, while the contribution of plant-derived carbon to SOC gradually declined. Plants biomass and iron minerals influenced the accumulation of lignin phenols, whereas amino sugars were affected by plants biomass, microbial biomass carbon and nitrogen, and clay minerals. The periodic flooding and drying events induced alterations in carbon inputs and environmental characteristics within the drawdown area, resulting in fluctuations in the contributions of plants and MNC to SOC in this region. The findings of this study highlight the critical role played by both plant- and microbial-derived carbon in the retention and turnover of SOC within the terrestrial-aquatic transition zone.

Divergent Changes in Soil Iron-Bound Organic Carbon Between Distinct Determination Methods

Fe-OC is crucial for SOC preservation in the global ecosystem. However, there is still significant uncertainty in the determination methods of Fe-OC, and these methods are often not calibrated to each other, making the Fe-OC content by different methods impossible to compare. Here, Fe-OC is analyzed by the CBD method and the SD method from 45 soils from different land types (e.g., wetland, grassland, and forest) to compare and analyze the uncertainty and influencing factors between the two methods. Our results showed that the Fe-OC contributions to SOC (fFe-OC) measured by CBD and SD methods were significantly lower in the wetland ecosystem than in grassland and forest ecosystems. The Fe-OC content and fFe-OC in the grassland ecosystem was significantly higher using the CBD method compared to the SD method, with no significant difference between the methods in wetland and forest ecosystems. The random forest model revealed that Fe-OCCBD content was mainly affected by C/N, Clay%, and TC, whereas SOC, total nitrogen, and soil inorganic carbon were the main influences on Fe-OCSD. Taken together, our findings highlight the importance of incorporating ecosystem types and soil properties into soil carbon estimation models when predicting and estimating Fe-OC and its contribution to SOC.

Deciphering the Intricate Control of Minerals on Deep Soil Carbon Stability and Persistence in Alaskan Permafrost

Understanding the fate of organic carbon in thawed permafrost is crucial for predicting climate feedback. While minerals and microbial necromass are known to play crucial roles in the long-term stability of organic carbon in subsoils, their exact influence on carbon persistence in Arctic permafrost remains uncertain. Our study, combining radiocarbon dating and biomarker analyses, showed that soil organic carbon in Alaskan permafrost had millennial-scale radiocarbon ages and contained only 10%-15% microbial necromass carbon, significantly lower than the global average of ~30%-60%. This ancient carbon exhibited a weak correlation with reactive minerals but a stronger correlation with mineral weathering (reactive iron to total iron ratio). Peroxidase activity displayed a high correlation coefficient (p < 10-6) with Δ14C and δ13C, indicating its strong predictive power for carbon persistence. Further, a positive correlation between peroxidase activity and polysaccharides indicates that increased peroxidase activity may promote the protection of plant residues, potentially by fostering the formation of mineral-organic associations. This protective role of mineral surfaces on biopolymers was further supported by examining 1451 synchrotron radiation infrared spectra from soil aggregates, which revealed a strong correlation between mineral OH groups and organic functional groups at the submicron scale. An incubation experiment revealed that increased moisture contents, particularly within the 0%-40% range, significantly elevated peroxidase activity, suggesting that ancient carbon in permafrost soils is vulnerable to moisture-induced destabilization. Collectively, this study offers mechanistic insights into the persistence of carbon in thawed permafrost soils, essential for refining permafrost carbon-climate feedbacks.

Contribution of complexed Fe(Ⅱ) oxygenation to norfloxacin humification and stabilization: Producing and trapping of more humified products

Organic pollutants polymerization in advanced oxidation processes or environmental matrices has attracted increasing attention, but little is known about stabilization of the polymerization products. The results in this work revealed the contribution of Fe(Ⅱ) oxygenation to stabilization of the products from norfloxacin (NOR) humification. It was found that upon oxygenation of Fe(Ⅱ) complexed by catechol (CT), NOR polymerized into the products with larger molecular weight through nucleophilic addition. Around 83.9-89.7 % organic carbon (OC) can be retained in the reaction solution and the precipitates at different Fe(II)/CT molar ratio. In this system with humification potential, the produced hydroxyl radical (HO•) dominantly modified, instead of decomposed, the structure of transformation products (TPs). TPs with diversified side chains were formed through hydroxylation and ring-opening, leading to the more humified products. In the subsequent Fe(Ⅱ) oxidative precipitation, Fe-TPs composites were formed as spherical particle clusters, which could steadily incorporate OC species with molecular fractionation. Specifically, lignin-like, tannins-like, condensed aromatic and high-molecular-weight TPs were preferentially preserved in the precipitates, while the recalcitrant aliphatic products mainly retained in the solution. These findings shed light on the role of Fe(Ⅱ) oxygenation in stabilizing the products from pollutants humification, which could strengthen both decontamination and organics sequestration.

How does exotic Spartina alterniflora affect the contribution of iron-bound organic carbon to soil organic carbon in salt marshes?

Iron-bound organic carbon (OC-FeR) is important for the stability of soil organic carbon (SOC) in salt marshes, and the Spartina alterniflora invasion reshaped local salt marshes and changed the SOC pool. To evaluate the effects of S. alterniflora invasion on the contribution of OC-FeR to SOC, we determined the OC-FeR content and soil characteristics in the 0-50 cm soil profile along the vegetation sequence, including mudflats (MF), S. alterniflora marshes established in 2003 (SA03) and 1989 (SA89), the ecotone of S. alterniflora and Phragmites australis (SE), S. salsa marsh (SS), and P. australis marsh (PA). The SOC content was 6.55-17.5 mg g-1 in the S. alterniflora marshes. Reactive iron oxides (Fed, Feo, Fep) accumulated significantly in the S. alterniflora and P. australis salt marshes. PA and S. alterniflora marshes had higher DOC contents of 0.28-0.77 mg g-1. The OC-FeR content in the 0-50 cm soil profile in these ecosystems ranged from 0.3 to 3.29 mg g-1, with a contribution to the SOC content (fOC-FeR) of approximately 11 %, which was highest in SA03 (16.3 % ~ 18.8 %), followed by SA89, SE, and PA. In addition, the molar ratios of OC-FeR to Fed were <1, indicating that the iron oxides were associated with SOC through sorption more than coprecipitation. According to the structural equation model, SOC, DOC and iron oxides were the direct driving factors of OC-FeR formation, while the vegetation zone indirectly functioned by regulating organic C inputs, iron oxide formation, and pH. This study suggested that S. alterniflora invasion promotes iron-bound organic carbon accumulation by increasing organic C inputs and regulating iron oxide formation in salt marshes, but such promotion will degenerate with development duration.

Potential retention of dissolved organic matter by soil minerals during wetland water-table fluctuations

Wetlands export large amounts of dissolved organic carbon (DOC) downstream, which is sensitive to water-table fluctuations (WTFs). While numerous studies have shown that WTFs may decrease wetland DOC via enhancing DOC biodegradation, an alternative pathway, i.e., retention of dissolved organic matter (DOM) by soil minerals, remains under-investigated. Here, we conducted a water-table manipulation experiment on intact soil columns collected from three wetlands with varying contents of reactive metals and clay to examine the potential retention of DOM by soil minerals during WTFs. Using batch sorption experiments and Fourier transform ion cyclotron resonance mass spectrometry, we showed that mineral (bentonite) sorption mainly retained lignin-, aromatic- and humic-like compounds (i.e., adsorbable compounds), in contrast to the preferential removal of protein- and carbohydrate-like compounds during biodegradation. Seven cycles of WTFs significantly decreased the intensity of adsorbable compounds in DOM (by 50 ± 21% based on fluorescence spectroscopy) and DOC adsorbability (by 2-20% and 1.9-12.7 mg L-1 based on batch sorption experiment), to a comparable extent compared with biodegradable compounds (by 11-32% and 1.6-15.2 mg L-1). Furthermore, oxidation of soil ferrous iron [Fe(II)] exerted a major control on the magnitude of potential DOM retention by minerals, while WTFs increased mineral-bound lignin phenols in the Zoige soil with the highest content of lignin phenols and Fe(II). Collectively, these results suggest that DOM retention by minerals likely played an important role in DOC decrease during WTFs, especially in soils with high contents of oxidizable Fe. Our findings support the 'iron gate' mechanism of soil carbon protection by newly-formed Fe (hydr)oxides during water-table decline, and highlight an underappreciated process (mineral-DOM interaction) leading to contrasting fate (i.e., preservation) of DOC in wetlands compared to biodegradation. Mineral retention of wetland DOC hence deserves more attention under changing climate and human activities.

Synergistic binding mechanisms of co-contaminants in soil profiles: Influence of iron-bearing minerals and microbial communities

In contaminated soil sites, the coexistence of inorganic and organic contaminants poses a significant threat to both the surrounding ecosystem and public health. However, the migration characteristics of these co-contaminants within the soil and their interactions with key components, including Fe-bearing minerals, organic matter, and microorganisms, remain unclear. This study involved the collection of a 4.3-m-depth co-contaminated soil profile to investigate the vertical distribution patterns of co-contaminants (namely, arsenic, cadmium, and polychlorinated biphenyls (PCBs)) and their binding mechanisms with environmental factors. The results indicated a notable downward accumulation of inorganic contaminants with increasing soil depth, whereas PCBs were predominantly concentrated in the uppermost layer. Chemical extraction and synchrotron radiation analysis highlighted a positive correlation between the abundance of reactive iron (FeCBD) and both co-contaminants and microbial communities in the contaminated site. Furthermore, Mantel tests and structural equation modeling (SEM) demonstrated the direct impacts of FeCBD and microbial communities on co-contaminants within the soil profile. Overall, these results provided valuable insights into the migration and transformation characteristics of co-contaminants and their binding mechanisms mediated by minerals, organic matter, and microorganisms.

Composition of DOM along the depth gradients in the paddy field treated with crop straw for 10 years

Crop straw return is a widely used agricultural management practice. The addition of crop straw significantly alters the pool of dissolved organic matter (DOM) in agricultural soils and plays a pivotal role in the global carbon (C) cycle, which is sensitive to climate change. The DOM concentration and composition at different soil depths could regulate the turnover and further storage of organic C in terrestrial systems. However, it is still unclear how crop straw return influences the change in DOM composition in rice paddy soils. Therefore, a field experiment was conducted in which paddy soil was amended with crop straw for 10 years. Two crop straw-addition treatments [NPK with 50% crop straw (NPK+1/2S) and NPK with 100% crop straw (NPK + S)], a conventional mineral fertilization control (NPK) and a non-fertilized control were included. Topsoil (0-20 cm) and subsoil (20-40 cm) samples were collected to investigate the soil DOM concentration and compositional structure of the profile. Soil nutrients, iron (Fe) fraction, microbial biomass carbon (MBC), and concentration and optical properties (UV-Vis and fluorescence spectra) of soil DOM were determined. Here, we found that the DOM in the topsoil was more humified than that in the subsoil. The addition of crop straw further decreased the humidification degree of DOM in the subsoil. In crop straw-amended topsoil, microbial decomposition controlled the composition of DOM and induced the formation of aromatic DOM. In the straw-treated subsoil, selective adsorption by poorly crystalline Fe(oxyhydr)oxides and microbial decomposition controlled the composition of DOM. In particular, the formation of protein-like compounds could have played a significant role in the microbial degradation of DOM in the subsoil. Overall, this work conducted a case study within long-term agricultural management to understand the changes in DOM composition along the soil profile, which would be further helpful for evaluating C cycling in agricultural ecosystems.

Microbial Necromass, Lignin, and Glycoproteins for Determining and Optimizing Blue Carbon Formation

Coastal wetlands contribute to the mitigation of climate change through the sequestration of "blue carbon". Microbial necromass, lignin, and glycoproteins (i.e., glomalin-related soil proteins (GRSP)), as important components of soil organic carbon (SOC), are sensitive to environmental change. However, their contributions to blue carbon formation and the underlying factors remain largely unresolved. To address this paucity of knowledge, we investigated their contributions to blue carbon formation along a salinity gradient in coastal marshes. Our results revealed decreasing contributions of microbial necromass and lignin to blue carbon as the salinity increased, while GRSP showed an opposite trend. Using random forest models, we showed that their contributions to SOC were dependent on microbial biomass and resource stoichiometry. In N-limited saline soils, contributions of microbial necromass to SOC decreased due to increased N-acquisition enzyme activity. Decreases in lignin contributions were linked to reduced mineral protection offered by short-range-ordered Fe (FeSRO). Partial least-squares path modeling (PLS-PM) further indicated that GRSP could increase microbial necromass and lignin formation by enhancing mineral protection. Our findings have implications for improving the accumulation of refractory and mineral-bound organic matter in coastal wetlands, considering the current scenario of heightened nutrient discharge and sea-level rise.

Increasing aggregate size reduces single-cell organic carbon incorporation by hydrogel-embedded wetland microbes

Microbial degradation of organic carbon in sediments is impacted by the availability of oxygen and substrates for growth. To better understand how particle size and redox zonation impact microbial organic carbon incorporation, techniques that maintain spatial information are necessary to quantify elemental cycling at the microscale. In this study, we produced hydrogel microspheres of various diameters (100, 250, and 500 μm) and inoculated them with an aerobic heterotrophic bacterium isolated from a freshwater wetland (Flavobacterium sp.), and in a second experiment with a microbial community from an urban lacustrine wetland. The hydrogel-embedded microbial populations were incubated with 13C-labeled substrates to quantify organic carbon incorporation into biomass via nanoSIMS. Additionally, luminescent nanosensors enabled spatially explicit measurements of oxygen concentrations inside the microspheres. The experimental data were then incorporated into a reactive-transport model to project long-term steady-state conditions. Smaller (100 μm) particles exhibited the highest microbial cell-specific growth per volume, but also showed higher absolute activity near the surface compared to the larger particles (250 and 500 μm). The experimental results and computational models demonstrate that organic carbon availability was not high enough to allow steep oxygen gradients and as a result, all particle sizes remained well-oxygenated. Our study provides a foundational framework for future studies investigating spatially dependent microbial activity in aggregates using isotopically labeled substrates to quantify growth.

Research progress of nano-scale secondary ion mass spectrometry (NanoSIMS) in soil science: Evolution, applications, and challenges

Nano-scale secondary ion mass spectrometry (NanoSIMS) has emerged as a powerful analytical tool for investigating various aspects of soils. In recent decades, the widespread adoption of advanced instrumentation and methods has contributed significantly to our understanding of organic-mineral assemblages. However, few literature reviews have comprehensively summarized NanoSIMS and its evolution, applications, limitations, and integration with other analytical techniques. In this review, we addressed this gap by comprehensively overviewing the development of NanoSIMS as an analytical tool in soils. This review covers studies on soil organic matter (SOM) cycling, soil-root interactions, and the behavior of metals, discussing the capability and limitations related to the distribution, composition, and interactions of various soil components that occur at mineral-organic interfaces. Furthermore, we examine recent advancements in high-resolution imaging and mass spectrometry technologies and their impact on the utilization of NanoSIMS in soils, along with potential new applications such as utilizing multiple ion beams and integrating them with other analytical techniques. The review emphasizes the importance of employing advanced techniques and methods to explore micro-interfaces and provide in situ descriptions of organic-mineral assemblages in future research. The ongoing development and refinement of NanoSIMS may yield new insights and breakthroughs in soil science, deepening our understanding of the intricate relationships between soil components and the processes that govern soil health and fertility.

Mechanisms for enhanced lignin humification with reduced organic matter loss by goethite in biogas residue composting

In this study, effects of three iron (oxyhydr)oxides on the biogas residue composting, i.e., composting with goethite (CFe1), hematite (CFe2) or magnetite (CFe3), were investigated. Results showed that composting performance of CFe1 was much better than those of CFe2 and CFe3. Addition of goethite increased temperature of CFe1 and enhanced lignin humification. More than 31.49% of Fe(III) in goethite was reduced to amorphous Fe(II) during the composting, suggesting that goethite worked as electron acceptor for microbial metabolism and heat generation. The functional bacteria Chloroflexi and Actinobacteria, and genes encoding key enzymes (AA1 family), which play essential roles in humification of lignin, were enriched in CFe1. Besides, goethite reduced 10.96% organic matter (OM) loss probably by increasing the molecular size and aggregation of OM for its protection during the composting. This study shows that adding goethite is an efficient strategy to enhancing the humification of lignin-rich biowaste.

Dynamic Production of Hydroxyl Radicals during the Flooding-Drainage Process of Paddy Soil: An In Situ Column Study

Frequent cycles of flooding and drainage in paddy soils lead to the reductive dissolution of iron (Fe) minerals and the reoxidation of Fe(II) species, all while generating a robust and consistent output of reactive oxygen species (ROS). In this study, we present a comprehensive assessment of the temporal and spatial variations in Fe species and ROS during the flooding-drainage process in a representative paddy soil. Our laboratory column experiments showed that a decrease in dissolved O2 concentration led to rapid Fe reduction below the water-soil interface, and aqueous Fe(II) was transformed into solid Fe(II) phases over an extended flooding time. As a result, the •OH production capacity of liquid phases was reduced while that of solid phases improved. The •OH production capacity of solid phases increased from 227-271 μmol kg-1 (within 1-11 cm depth) to 500-577 to 499-902 μmol kg-1 after 50 day, 3 month, and 1 year incubation, respectively. During drainage, dynamic •OH production was triggered by O2 consumption and Fe(II) oxidation. ROS-trapping film and in situ capture revealed that the soil surface was the active zone for intense H2O2 and •OH production, while limited ROS production was observed in the deeper soil layers (>5 cm) due to the limited oxygen penetration. These findings provide more insights into the complex interplay between dynamic Fe cycling and ROS production in the redox transition zones of paddy fields.