Development of nitrification inhibition assays using pure cultures of Nitrosomonas and Nitrobacter

Reduction of greenhouse gas emissions from closed activated sludge- to aerobic granular sludge-based biosystems via gas circulation

Greenhouse gas (GHG) emissions from biological treatment units are challenging wastewater treatment plants (WWTPs) due to their wide applications and global warming. This study aimed to reduce GHG emissions (especially N2O) using a gas circulation strategy in a closed sequencing-batch reactor when the biological unit varies from activated sludge (AS) to aerobic granular sludge (AGS). Results show that gas circulation lowers pH to 6.3 ± 0.2, facilitating regular granules but elevating total N2O production. From AS to AGS, N2O emission factor increased (0.07-0.86 %) due to decreasing ammonia-oxidizing rates while the emissions of CO2 (0.3 ± 0.1 kg-CO2/kg-chemical oxygen demand) and CH4 remained in the closed biosystem. The gas circulation decreased N2O emission factor by 63 ± 15 % after granulation higher than 44 ± 34 % before granulation, which is implemented by heterotrophic denitrification. This study provides a feasible strategy to enhance heterotrophic N2O elimination in the biological WWTPs.

The spatiotemporal heterogeneity of fertosphere hotspots impacted by biochar addition and the implications for NH3 and N2O emissions

The fertosphere, as the interfaces between fertilizer granular and soil particles, represents a key hotspot for nitrogen transformation processes, particularly for ammonia (NH3) and nitrous oxide (N2O) emissions. Understanding the heterogeneity of the fertosphere, especially when incorporating organic amendments like biochars, is crucial for predicting NH3 and N2O emissions after soil fertilization. In this study, we investigated the effects of three types of biochar (pristine, aged, and acid-washed biochar) on heterogeneity of fertosphere induced by localized urea application. pH-specific planar optodes were employed to visualize pH gradients in fertosphere hotspots with high spatial and temporal resolution. In addition, we conducted thorough measurements of the gradient distribution of electric conductivity (EC), mineral N, aqueous NH3 in soil and enzyme activities relevant to nitrification. Concurrently, NH3 and N2O emissions from the soil were continuously monitored at a high temporal resolution. Initially, urea-induced fertosphere exhibited significant NH3 emissions, primarily attributed to the pH elevation resulting from urea hydrolysis. However, after 6 days, NH3 emissions subsided, and there was a notable sharp increase in N2O emissions. Importantly, compared to urea application alone, the inclusion of pristine biochar led to a delay in soil pH decline with a 19% rise in NH3 emission. Aged biochar, characterized by a higher content of oxygen functional groups, demonstrated increased NH4+/NH3 adsorption capacity and enhanced ammonia monooxygenase (AMO) activity in soil, resulting in an 18% reduction in NH3 emission. While a slight decrease of 5% in NH3 cumulative emission was observed in the acid-washed biochar treatment. Notably, biochar could potentially promote nitrification-derived N2O emissions due to the accumulation of NH3 oxidation products (NH2OH). These findings could contribute to refining N transformation models for fertilized soils, and optimizing N fertilizer application strategies.

The influence of using different types of modified vermiculite cover on ammonia mitigation from animal slurry storage: The role of sulfuric acid

Animal slurry storage is an important ammonia (NH3) emission source. Sulfuric acid (H2SO4)-modified vermiculite coverage is a new promising technology for controlling NH3 emission from slurry storage. However, the underlying mechanisms in controlling the mitigation effect remain unclear. Here, a series of experiments to determine the effect of H2SO4 on the modified vermiculite properties, floating persistence, and NH3 mitigation effect was conducted. Results showed that abundant H2SO4 and sulfate remained on the outer surface and in the extended inner pores of the vermiculite with acidifying H+ concentrations higher than 5 M. An initial strong instantaneous acidification of surface slurry released rich carbon dioxide bubbles, strengthening cover floating performance. An acidification in the vermiculite cover layer and a good coverage inhibition interacted, being the two leading mechanisms for mitigating NH3 during initial 40-50 days of storage. The bacterial-amoA gene dominated the conversion of NH3 to nitrous oxide after 50 days of storage. Vermiculite with 5 M H+ modification reduced the NH3 emissions by 90 % within the first month of slurry storage and achieved a 64 % mitigation efficiency throughout the 84 days period. With the development of the aerial spraying equipment such as agricultural drones, acidifying vermiculite coverage hold promise as an effective method for reducing NH3 emission while absorbing nutrients from liquid slurry storage tank or lagoon. This design should now be tested under field conditions.

Effects of operational parameters on bacterial communities in Hong Kong and global wastewater treatment plants

Wastewater treatment plants (WWTPs) are indispensable biotechnology facilities for modern cities and play an essential role in modern urban infrastructure by employing microorganisms to remove pollutants in wastewater, thus protecting public health and the environment. This study conducted a 13-month bacterial community survey of six full-scale WWTPs in Hong Kong with samples of influent, activated sludge (AS), and effluent to explore their synchronism and asynchronism of bacterial community. Besides, we compared AS results of six Hong Kong WWTPs with data from 1,186 AS amplicon data in 269 global WWTPs and a 9-year metagenomic sequencing survey of a Hong Kong WWTP. Our results showed the compositions of bacterial communities varied and the bacterial community structure of AS had obvious differences across Hong Kong WWTPs. The co-occurrence analysis identified 40 pairs of relationships that existed among Hong Kong WWTPs to show solid associations between two species and stochastic processes took large proportions for the bacterial community assembly of six WWTPs. The abundance and distribution of the functional bacteria in worldwide and Hong Kong WWTPs were examined and compared, and we found that ammonia-oxidizing bacteria had more diversity than nitrite-oxidizing bacteria. Besides, Hong Kong WWTPs could make great contributions to the genome mining of microbial dark matter in the global "wanted list." Operational parameters had important effects on OTUs' abundance, such as the temperature to the genera of Tetrasphaera, Gordonia and Nitrospira. All these results obtained from this study can deepen our understanding of the microbial ecology in WWTPs and provide foundations for further studies.

IMPORTANCE

Wastewater treatment plants (WWTPs) are an indispensable component of modern cities, as they can remove pollutants in wastewater to prevent anthropogenic activities. Activated sludge (AS) is a fundamental wastewater treatment process and it harbors a highly complex microbial community that forms the main components and contains functional groups. Unveiling "who is there" is a long-term goal of the research on AS microbiology. High-throughput sequencing provides insights into the inventory diversity of microbial communities to an unprecedented level of detail. At present, the analysis of communities in WWTPs usually comes from a specific WWTP and lacks comparisons and verification among different WWTPs. The wide-scale and long-term sampling project and research in this study could help us evaluate the AS community more accurately to find the similarities and different results for different WWTPs in Hong Kong and other regions of the world.

Mathematical modelling and comparative analysis of treatment technologies for upgrading wastewater treatment plants: A case study of biofilm reactors in El-Gouna, Egypt

In recent years, Moving Bed Biofilm Reactors (MBBRs) have been preferred to conventional processes with suspended biomass. The main reason for this preference is that it can achieve better removal efficiencies than conventional systems with smaller footprints. However, unlocking the full potential of MBBRs in large-scale WWTPs remains challenging in real life. In this study, the performance of three different treatment technologies, Extended Aeration Activated Sludge (EAAS), Hybrid Fixed Bed Biofilm Reactor (HFBBR), and Hybrid Moving Bed Biofilm Reactor (HMBBR), was investigated over a year in a WWTP located in El-Gouna, Egypt. The COD removal efficiencies of the three systems were comparable, with the EAAS achieving 93.5%, HFBBR 94%, and HMBRR 95%. Nevertheless, the NH4 removal efficiency of the EAAS was slightly lower (97.5%) than that of the HFBBR and the HMBBR, that achieved a removal efficiency of 98%. BioWin Software was able to mimic the real case of the WWTP of El-Gouna and critically defined all plant limitations and operational data. Different simulations were modeled to test the hydraulic and organic loading capacities of the three systems under different scenarios and operating conditions. The HMBBR system failed to withstand the increase in organic load because of the biomass sloughing effect and subsequently high TSS loads in the settlers. Biomass sloughing overloaded the settlers and lead to biomass loss in the effluent. As the settleability of the HMBBR sludge was significantly lower than for the HFBBR the TSS loss in the effluent happened that much earlier that the moving carrier application had an adverse effect contradicting with the primary purpose of adding media carriers. Model simulations and data analysis findings were used to recommend the most suitable configuration for upgrading an existing system using the attached growth technique with all kinetic parameters and operational conditions. The recommended configuration focuses mainly on the separation of plastic media in a compartment with a very low hydraulic retention time to absorb the incoming shock load.

Influencing factors on the activity of an enriched Nitrospira culture with granular morphology

Nitrospira is a common genus of nitrite-oxidising bacteria (NOB) found in wastewater treatment plants (WWTPs). To identify the key factors influencing the composition of NOB communities, research was conducted using both sequencing batch reactor (SBR) and continuous flow reactor under different conditions. High-throughput 16S rRNA gene sequencing revealed that Nitrospira (18.79% in R1 and 25.77% in R3) was the dominant NOB under low dissolved oxygen (DO) and low nitrite (NO 2 - -N) concentrations, while Nitrobacter (21.26% in R2) was the dominant NOB under high DO and high NO 2 - -N concentrations. Flocculent and granule sludge were cultivated with Nitrospira as the dominant genus. Compared to Nitrospira flocculent sludge, Nitrospira granule sludge had higher inhibition threshold concentrations for free ammonia (FA) and free nitrous acid (FNA). It was more likely to resist adverse environmental disturbances. Furthermore, the effects of environmental factors such as temperature, pH, and DO on the activity of Nitrospira granular sludge were also studied. The results showed that the optimum temperature and pH for Nitrospira granular sludge were 36°C and 7.0, respectively. Additionally, Nitrospira granular sludge showed a higher dissolved oxygen half-saturation constant (Ko) of 3.67 ± 0.71 mg/L due to its morphological characteristics. However, the majority of WWTPs conditions do not meet the conditions for the Nitrospira granular sludge. Thus, it can be speculated that future development of aerobic partial nitrification granular sludge may automatically eliminate the influence of Nitrospira. This study provides a theoretical basis for a deeper understanding of Nitrospira and the development of future water treatment processes.

Reactive and microbial inhibitory mechanisms depicting the panoramic view of pH stress effect on common biological nitrification

pH is a crucial factor of microbial nitrification, which often combines with high-strength ammonium to influence nitrogen removal pathway in wastewater treatment. However, the detailed inhibitory mechanisms of pH stress are not sufficiently disclosed yet. In this study, the pH stress effect on nitrification was comprehensively studied by a set of experiments which identified the reactivity of nitrification processes and activity of nitrifiers, the time dependence of inhibition effect and the hybrid pH stress effect with ammonium. The results revealed two distinct inhibitory mechanisms dominating in alkaline and acid ranges. In alkaline range (pH > 8), pH stress causes physiological damages on microorganisms which is named as microbial inhibition. It has the features of less recoverability of nitrifiers, time-dependent inhibition effect and low pH-tolerance of nitrite oxidation bacteria. Free ammonia enhanced microbial inhibition and greatly promoted nitrite accumulation. A novel reactive inhibition mechanism dominated in acid range (pH < 7) was disclosed. It only impedes ammonia oxidation process (AOP) but not impair microbial activity obviously and the effect is time-independent. The mechanism was clarified from H⁺ transport because AOP involved H⁺ production. The H⁺ transport was impeded under acid stress owing to the decrease of pH gradient across cell membrane. The two mechanisms formed a panoramic view of pH stress effect on nitrification advancing the understanding of nitrifier adaptability and nitritation regulation in wastewater treatment processes.

Effect of steel slag on ammonia removal and ammonia-oxidizing microorganisms in zeolite-based tidal flow constructed wetlands

The ammonia removal performance of tidal flow constructed wetlands (TFCWs) requires to be improved under high hydraulic loading rates (HLRs). The pH decrease caused by nitrification may adversely affect the NH₄⁺-N removal and ammonia-oxidizing microorganisms (AOMs) of TFCWs. Herein, TFCWs with zeolite (TFCW_Z) and a mixture of zeolite and steel slag (TFCW_S) were built to investigate the influence of steel slag on NH₄⁺-N removal and AOMs. Both TFCWs were operated under short flooding/drying (F/D) cycles and high HLRs (3.13 and 4.69 m³/(m² d)). The results revealed that a neutral effluent pH (6.98-7.82) was achieved in TFCW_S owing to the CaO dissolution of steel slag. The NH₄⁺-N removal efficiencies in TFCW_S (91.2 ± 5.1%) were much higher than those in TFCW_Z (73.2 ± 7.1%). Total nitrogen (TN) removal was poor in both TFCWs mainly due to the low influent COD/TN. Phosphorus removal in TFCW_S was unsatisfactory because of the short hydraulic retention time. The addition of steel slag stimulated the flourishing AOMs, including Nitrosomonas (ammonia-oxidizing bacteria, AOB), Candidatus_Nitrocosmicus (ammonia-oxidizing archaea, AOA), and comammox Nitrospira, which may be responsible for the better ammonia removal performance in TFCW_S. PICRUSt2 showed that steel slag also enriched the relative abundance of functional genes involved in nitrification (amoCAB, hao, and nxrAB) but inhibited genes related to denitrification (nirK, norB, and nosZ). Quantitative polymerase chain reaction (qPCR) revealed that complete AOB (CAOB) and AOB contributed more to the amoA genes in TFCW_S and TFCW_Z, respectively. Therefore, this study revealed that the dominant AOMs could be significantly changed in zeolite-based TFCW by adding steel slag to regulate the pH in situ, resulting in a more efficient NH₄⁺-N removal performance.

Advanced light-tolerant microalgae-nitrifying bacteria consortia for stable ammonia removal under strong light irradiation using light-shielding hydrogel

The consortium of microalgae and nitrifying bacteria has attracted attention owing to its advantages, such as energy- and cost-efficiency in terms of using only light irradiation without aeration. However, high light intensity can easily cause photoinhibition of nitrifying bacteria, resulting in process breakdown of the consortium. This challenge limits its practical application in outdoor environment. In a previous study, we developed a "light-shielding hydrogel" which entrapped nitrifying bacteria in carbon black-added alginate hydrogel beads and confirmed its effectiveness of protecting the nitrifying bacteria from intense light up to 1600 μmol photons m^-2 s^-1. However, the applicability of the light-shielding hydrogel to microalgae-nitrifying bacteria consortia under strong light irradiation has not yet been clarified. In this study, we aimed to establish consortia of Chlorella sorokiniana and nitrifying bacteria immobilised in light-shielding hydrogel and evaluate their nitrification performance under strong light. Three nitrifying bacteria conditions were used: light-shielding hydrogel, hydrogel containing only nitrifying bacteria without carbon black ('hydrogel'), and dispersed nitrifier without immobilisation ('dispersion') as a control. At 1600 μmol photons m^-2 s^-1, the dispersion afforded a significant decrease in nitrification activity and subsequent process breakdown. In contrast, light-shielding hydrogel achieved complete nitrification without nitrite accumulation and had nitrification rates of approximately nine and two times higher than those for the dispersion and hydrogel conditions, respectively. Based on the overall evaluation, a possible sequence of process breakdown under strong light was also proposed. This study demonstrated for the first time that the light-shielding hydrogel/consortia combination had potential for applications, which require mitigation of photoinhibition under strong light irradiation. Further, it is expected that the proposed method will contribute to realise the practical application of microalgae-nitrifying bacteria consortia in various countries that experience high sunlight intensity due to their location in the sunbelt areas.

Response of substrate kinetics and biological mechanisms to various pH constrains for cultured Nitrobacter and Nitrospira in nitrifying bioreactor

Nitrite (NO₂^-) oxidation is an essential step of biological nitrogen cycling in natural ecosystems, and is performed by chemolithoautotrophic nitrite-oxidizing bacteria (NOB). Although Nitrobacter and Nitrospira are regarded as representative NOB in nitrification systems, little attention has focused on kinetic characterisation of the coexistence of Nitrobacter and Nitrospira at various pH values. Here, we evaluate the substrate kinetics, biological mechanism and microbial community dynamics of an enrichment culture including Nitrobacter (17.5 ± 0.9%) and Nitrospira (7.2 ± 0.6%) in response to various pH constrains. Evaluation of the Monod equation at pH 6.0, 6.5, 7.0, 7.5, 8.0 and 8.5 showed that the enrichment had maximum rate (r_max) and maximum substrate affinity (K_S) for NO₂^- oxidation at pH 7.0, which was also supported by the largest absolute abundance of Nitrobacter nxrA (5.26 × 10⁷ copies per g wet sludge) and Nitrospira nxrB (1.975 × 10⁹ copies per g wet sludge) genes. Moreover, the predominant species for the Nitrobacter-like nxrA were N. vulgaris and N. winogradskyi, while for the Nitrospira-like nxrB, the predominant species were N. japonica, N. calida and Ca. N. bockiana. Furthermore, the r_max was strongly and positively correlated with the abundance of the Nitrobacter nxrA or Nitrospira nxrB genes, or N. winogradsk, whereas K_S was positively correlated with the abundance of Nitrobacter nxrA or Nitrospira nxrB genes or Ca. N. bockiana. Overall, this study could improve basis kinetic parameters and biological mechanism of NO₂^- oxidation in WWTPs.

Review of Nitrification Monitoring and Control Strategies in Drinking Water System

Nitrification is a major challenge in chloraminated drinking water systems, resulting in undesirable loss of disinfectant residual. Consequently, heterotrophic bacteria growth is increased, which adversely affects the water quality, causing taste, odour, and health issues. Regular monitoring of various water quality parameters at susceptible areas of the water distribution system (WDS) helps to detect nitrification at an earlier stage and allows sufficient time to take corrective actions to control it. Strategies to monitor nitrification in a WDS require conducting various microbiological tests or assessing surrogate parameters that are affected by microbiological activities. Additionally, microbial decay factor (Fm) is used by water utilities to monitor the status of nitrification. In contrast, approaches to manage nitrification in a WDS include controlling various factors that affect monochloramine decay rate and ammonium substrate availability, and that can inhibit nitrification. However, some of these control strategies may increase the regulated disinfection-by-products level, which may be a potential health concern. In this paper, various strategies to monitor and control nitrification in a WDS are critically examined. The key findings are: (i) the applicability of some methods require further validation using real WDS, as the original studies were conducted on laboratory or pilot systems; (ii) there is no linkage/formula found to relate the surrogate parameters to the concentration of nitrifying bacteria, which possibly improve nitrification monitoring performance; (iii) improved methods/monitoring tools are required to detect nitrification at an earlier stage; (iv) further studies are required to understand the effect of soluble microbial products on the change of surrogate parameters. Based on the current review, we recommend that the successful outcome using many of these methods is often site-specific, hence, water utilities should decide based on their regular experiences when considering economic and sustainability aspects.

Simultaneous Heterotrophic Nitrification and Aerobic Denitrification of Water after Sludge Dewatering in Two Sequential Moving Bed Biofilm Reactors (MBBR)

Water after sludge dewatering, also known as reject water from anaerobic digestion, is recycled back to the main wastewater treatment inlet in the wastewater treatment plant Porsgrunn, Norway, causing periodic process disturbance due to high ammonium of 568 (±76.7) mg/L and total chemical oxygen demand (tCOD) of 2825 (±526) mg/L. The main aim of this study was the simultaneous treatment of reject water ammonium and COD using two pilot-scale sequential moving bed biofilm reactors (MBBR) implemented in the main wastewater treatment stream. The two pilot MBBRs each had a working volume of 67.4 L. The biofilm carriers used had a protected surface area of 650 m²/m³ with a 60% filling ratio. The results indicate that the combined ammonia removal efficiency (ARE) in both reactors was 65.9%, while the nitrite accumulation rate (NAR) and nitrate production rate (NPR) were 80.2 and 19.8%, respectively. Over 28% of the reject water’s tCOD was removed in both reactors. The heterotrophic nitrification and oxygen tolerant aerobic denitrification were the key biological mechanisms found for the ammonium removal in both reactors. The dominant bacterial family in both reactors was Alcaligenaceae, capable of simultaneous heterotrophic nitrification and denitrification. Moreover, microbial families that were found with equal potential for application of simultaneous heterotrophic nitrification and aerobic denitrification including Cloacamonaceae, Alcaligenaceae, Comamonadaceae, Microbacteriaceae, and Anaerolinaceae.

Evaluating acute toxicity in enriched nitrifying cultures: Lessons learned

Toxicological batch assays are essential to assess a compound's acute effect on microorganisms. This methodology is frequently employed to evaluate the effect of contaminants in sensitive microbial communities from wastewater treatment plants (WWTPs), such as autotrophic nitrifying populations. However, despite nitrifying batch assays being commonly mentioned in the literature, their experimental design criteria are rarely reported or overlooked. Here, we found that slight deviations in culture preparations and conditions impacted bacterial community performance and could skew assay results. From pre-experimental trials and experience, we determined how mishandling and treatment of cultures could affect nitrification activity. While media and biomass preparations are needed to establish baseline conditions (e.g., biomass washing), we found extensive centrifugation selectively destabilised nitrification activities. Further, it is paramount that the air supply is adjusted to minimise nitrite build-up in the culture and maintain suitable aeration levels without sparging ammonia. DMSO and acetone up to 0.03% (v/v) were suitable organic solvents with minimal impact on nitrification activity. In the nitrification assays with allylthiourea (ATU), dilute cultures exhibited more significant inhibition than concentrated cultures. So there were biomass-related effects; however, these differences minimally impacted the EC₅₀ values. Using different nutrient-media compositions had a minimal effect; however, switching mineral media for the toxicity test from the original cultivation media is not recommended because it reduced the original biomass nitrification capacity. Our results demonstrated that these factors substantially impact the performance of the nitrifying inoculum used in acute bioassays, and consequently, affect the response of AOB-NOB populations during the toxicant exposure. These are not highlighted in operation standards, and unfortunately, they can have significant consequential impacts on the determinations of toxicological endpoints. Moreover, the practical procedures tested here could support other authors in developing testing methodologies, adding quality checks in the experimental framework with minimal waste of time and resources.

Pharmaceuticals and personal care products' (PPCPs) impact on enriched nitrifying cultures

The impact of pharmaceutical and personal care products (PPCPs) on the performance of biological wastewater treatment plants (WWTPs) has been widely studied using whole-community approaches. These contaminants affect the capacity of microbial communities to transform nutrients; however, most have neither honed their examination on the nitrifying communities directly nor considered the impact on individual populations. In this study, six PPCPs commonly found in WWTPs, including a stimulant (caffeine), an antimicrobial agent (triclosan), an insect repellent ingredient (N,N-diethyl-m-toluamide (DEET)) and antibiotics (ampicillin, colistin and ofloxacin), were selected to assess their short-term toxic effect on enriched nitrifying cultures: Nitrosomonas sp. and Nitrobacter sp. The results showed that triclosan exhibited the greatest inhibition on nitrification with EC₅₀ of 89.1 μg L^-1. From the selected antibiotics, colistin significantly affected the overall nitrification with the lowest EC₅₀ of 1 mg L^-1, and a more pronounced inhibitory effect on ammonia-oxidizing bacteria (AOB) compared to nitrite-oxidizing bacteria (NOB). The EC₅₀ of ampicillin and ofloxacin was 23.7 and 12.7 mg L^-1, respectively. Additionally, experimental data suggested that nitrifying bacteria were insensitive to the presence of caffeine. In the case of DEET, moderate inhibition of nitrification (<40%) was observed at 10 mg L^-1. These findings contribute to the understanding of the response of nitrifying communities in presence of PPCPs, which play an essential role in biological nitrification in WWTPs. Knowing specific community responses helps develop mitigation measures to improve system resilience.

Physiology of the Nitrite-Oxidizing Bacterium Candidatus Nitrotoga sp. CP45 Enriched From a Colorado River

Nitrogen cycling microbes, including nitrite-oxidizing bacteria (NOB), perform critical ecosystem functions that help mitigate anthropogenic stresses and maintain ecosystem health. Activity of these beneficial nitrogen cycling microbes is dictated in part by the microorganisms’ response to physicochemical conditions, such as temperature, pH, and nutrient availability. NOB from the newly described Candidatus Nitrotoga genus have been detected in a wide range of habitats across the globe, yet only a few organisms within the genus have been physiologically characterized. For freshwater systems where NOB are critical for supporting aquatic life, Ca. Nitrotoga have been previously detected but little is known about the physiological potential of these organisms or their response to changing environmental conditions. Here, we determined functional response to environmental change for a representative freshwater species of Ca. Nitrotoga (Ca. Nitrotoga sp. CP45, enriched from a Colorado river). The physiological findings demonstrated that CP45 maintained nitrite oxidation at pH levels of 5–8, at temperatures from 4 to 28°C, and when incubated in the dark. Light exposure and elevated temperature (30°C) completely halted nitrite oxidation. Ca. Nitrotoga sp. CP45 maintained nitrite oxidation upon exposure to four different antibiotics, and potential rates of nitrite oxidation by river sediment communities were also resilient to antibiotic stress. We explored the Ca. Nitrotoga sp. CP45 genome to make predictions about adaptations to enable survival under specific conditions. Overall, these results contribute to our understanding of the versatility of a representative freshwater Ca. Nitrotoga sp. Identifying the specific environmental conditions that maximize NOB metabolic rates may ultimately direct future management decisions aimed at restoring impacted systems.

Carbon and Nitrogen Dynamics, and CO2 Efflux in the Calcareous Sandy Loam Soil Treated with Chemically Modified Organic Amendments

In Saudi Arabia, more than 335,000 tons of cow manure is produced every year from dairy farming. However, the produced cow manure is usually added to the agricultural soils as raw or composted manure; significant nitrogen losses occur during the storage, handling, and application of the raw manure. The recovery of ammonia from cow manure through thermochemical treatments is a promising technique to obtain concentrated nitrogen fertilizer and reducing nitrogen losses from raw manure. However, the byproduct effluents from the recovery process are characterized by different chemical properties from the original raw manure; thus, its impact as soil amendments on the soil carbon and nitrogen dynamics is unknown. Therefore, a 90-day incubation experiment was conducted to study the impact of these effluents on CO₂ efflux, organic C, microbial biomass C, available NH₄⁺, and NO₃⁻ when added to agricultural soil. In addition to the two types of effluents (produced at pH 9 and pH 12), raw cow manure (CM), composted cow manure (CMC), cow manure biochar (CMB), and control were used for comparison. The application of CM resulted in a considerable increase in soil available nitrogen and CO₂ efflux, compared to other treatments. Cow manure biochar showed the lowest CO₂ efflux. Cumulative CO₂ effluxes of cow manure effluents were lower than CM; this is possibly due to the relatively high C:N ratio of manure effluent. The content of P, Fe, Cu, Zn, and Mn decreased as incubation time increased. Soil microbial biomass C for soil treated with cow manure effluents (pH 12 and 7) was significantly higher than the rest of the soil amendments and control.

Efficient Nitrification and Low-Level N2O Emission in a Weakly Acidic Bioreactor at Low Dissolved-Oxygen Levels Are Due to Comammox

Nitrification is an essential process for nutrient removal from wastewater and an important emission source of nitrous oxide (N2O), which is a powerful greenhouse gas and a dominant ozone-depleting substance. In this study, nitrification and N2O emissions were tested in two weakly acidic (pH 6.3 to 6.8) reactors: one with dissolved oxygen (DO) at over 2.0 mg/liter and the other with DO at approximately 0.5 mg/liter. Efficient nitrification was achieved in both reactors. Compared to that in the high-DO reactor, N2O emission in the low-DO reactor decreased slightly, by 20%, and had insignificant correlation with the fluctuations of DO (P = 0.935) and nitrite (P = 0.713), indicating that N2O might not be produced mainly via nitrifier denitrification. Based on quantitative PCR (qPCR), quantitative fluorescent in situ hybridization (qFISH), and functional gene amplicon and metagenome sequencing, it was found that complete ammonia oxidizers (comammox), i.e., Nitrospira organisms, significantly outnumbered canonical ammonia-oxidizing bacteria (AOB) in both weakly acidic reactors, especially in the low-DO reactor with the comammox/AOB amoA gene ratio increasing from 6.6 to 17.1. Therefore, it was speculated that the enriched comammox was the primary cause for the slightly decreased N2O emission under long-term low DO in the weakly acidic reactor. This study demonstrated that the comammox Nitrospira can survive well under the weakly acidic and low-DO conditions, implying that achieving efficient nitrification with low N2O emission as well as low energy and alkalinity consumption is feasible for wastewater treatment.IMPORTANCE Nitrification in wastewater treatment is an important process for eutrophication control and an emission source for the greenhouse gas N2O. The nitrifying process is usually operated at a slightly alkaline pH and high DO (>2 mg/liter) to ensure efficient nitrification. However, it consumes a large amount of energy and chemicals, especially for wastewater without sufficient alkalinity. This paper demonstrates that comammox can adapt well to the weakly acidic and low-DO bioreactors, with a result of efficient nitrification and low N2O emission. These findings indicate that comammox organisms are significant for sustainable wastewater treatment, which provides an opportunity to achieve efficient nitrification with low N2O production as well as low energy and chemical consumption simultaneously.

Efficient nitrification and low N2O emission in a weakly acidic bioreactor at low dissolved oxygen levels are due to comammox

Nitrification is an essential process for nutrient removal from wastewater and an important emission source of nitrous-oxide (N₂O), which is a powerful greenhouse gas and a dominant ozone-depleting substance. In this study, nitrification and N₂O emissions were tested in two weakly acidic (pH = 6.3-6.8) reactors: one with dissolved oxygen (DO) over 2.0 mg/L and the other with DO approximately 0.5 mg/L. Efficient nitrification was achieved in both reactors. Compared to the high-DO reactor, N₂O emission in the low-DO reactor decreased slightly by 20% and had insignificant correlation with the fluctuations of DO (P = 0.935) and nitrite (P = 0.713), indicating that N₂O might not be mainly produced via nitrifier denitrification. Based on qPCR, qFISH, functional gene amplicon and metagenome sequencing, it was found that complete ammonia oxidizer (comammox) Nitrospira significantly outnumbered canonical ammonia-oxidizing bacteria (AOB) in both weakly acidic reactors, especially in the low DO reactor with the comammox/AOB amoA gene ratio increasing from 6.6 to 17.1. Therefore, it was speculated that the enriched comammox was the primary cause for the slightly decreased N₂O emission under long-term low DO in weakly acidic reactor. This study demonstrated that comammox Nitrospira can survive well under the weakly acidic and low-DO conditions, implying that achieving efficient nitrification with low N₂O emission as well as low energy and alkalinity consumption is feasible for wastewater treatment.ImportanceNitrification in wastewater treatment is an important process for eutrophication control and an emission source for greenhouse gas of N₂O. The nitrifying process is usually operated at a slightly alkaline pH and high DO (>2 mg/L) to ensure efficient nitrification. However, it consumes a large amount of energy and chemicals especially for wastewater without sufficient alkalinity. This manuscript demonstrated that comammox can adapt well to the weakly acidic and low-DO bioreactors, with a result of efficient nitrification and low N₂O emission. These findings indicate that comammox are significant for sustainable wastewater treatment, which provides an opportunity to achieve efficient nitrification with low N₂O production as well as low energy and chemical consumption simultaneously.

Dams Change Beta Diversity of Aquatic Communities in the Veredas of the Brazilian Cerrado

The veredas are wetland ecosystems responsible for supplying most of the water for rivers and streams in the Cerrado. The veredas’ hydromorfic soils retain a large amount of rainwater, releasing it slowly during drier periods. Therefore, these habitats are often used to build dams for cattle raising. Here we assessed the environmental conditions and beta-diversity of Odonata and Heteroptera on veredas impacted by dams in the Brazilian Cerrado. We sampled biological communities and a set of environmental variables in 13 veredas, six with dams and seven without dams. One limnological variable [oxidation–reduction potential (ORP)] and one landscape metric (% of the altered area) differed among veredas with and without dams. These variables were important predictors of the beta-diversity of both Odonata (R2= 0.650;p&lt; 0.001) and Heteroptera (R2= 0.740;p&lt; 0.001). The veredas stand among the most sensitive wetland ecosystems of the Cerrado. In this study, we show, for the first time, that veredas with dams may lose environmental quality resulting in changes in biological communities, especially ecologically unique species. Because the Cerrado naturally goes through approximately 5 months of severe drought, the veredas are critical for the Cerrado’s hydric safety. Therefore, we recommend that cattle-raising activities should rely on artificial water tanks instead of using dams for water storage since it affects ecologically unique species in this poorly known ecosystem.

Removal of Nitrogen and Phosphorus from Thickening Effluent of an Urban Wastewater Treatment Plant by an Isolated Green Microalga

Microalgae are photosynthetic microorganisms and are considered excellent candidates for a wide range of biotechnological applications, including the removal of nutrients from urban wastewaters, which they can recover and convert into biomass. Microalgae-based systems can be integrated into conventional urban wastewater treatment plants (WW-TP) to improve the water depuration process. However, microalgal strain selection represents a crucial step for effective phytoremediation. In this work, a microalga isolated from the effluent derived from the thickening stage of waste sludge of an urban WW-TP was selected and tested to highlight its potential for nutrient removal. Ammonium and phosphate abatements by microalgae were evaluated using both the effluent and a synthetic medium in a comparative approach. Parallelly, the isolate was characterized in terms of growth capability, morphology, photosynthetic pigment content and photosystem II maximum quantum yield. The isolated microalga showed surprisingly high biomass yield and removal efficiency of both ammonium and phosphate ions from the effluent but not from the synthetic medium. This suggests its clear preference to grow in the effluent, linked to the overall characteristics of this matrix. Moreover, biomass from microalgae cultivated in wastewater was enriched in photosynthetic pigments, polyphosphates, proteins and starch, but not lipids, suggesting its possible use as a biofertilizer.

Whether glycine betaine improves the thermotolerance of mesophilic anammox consortia

While the application of mesophilic anammox process is currently the state of the art, the feasibility of a thermophilic anammox bioprocess is still unclear. In this study, we investigate whether glycine betaine (GB) addition can enhance the thermotolerance of mesophilic anammox biomass in the upflow anaerobic sludge blanket (UASB) reactors fed with synthetic wastewater at a nitrogen loading of approximately 4 kg N m^-3 d^-1. The results showed that during a long-term operation at 45°C with GB (0, 0.1, 1, 2 mM) addition, anammox performance became worse with the final effluent concentrations of NO₂ ^-N of 145 ± 11.6 mg L^-1 and nitrogen removal efficiency decreased from 92.3-6.9%. Specific anammox activity decreased from 392.1 ± 12.1-6.0 ± 0.8 mg N g^-1 VSS d^-1, which were not significantly higher than those in the control reactor. The content of heme c showed a stronger downward trend in T₁ (with GB addition) than in the control reactor T₀. The qPCR results showed that the relative abundance of Candidatus Kuenenia decreased in both the experimental (from 53.5-28.8%) and control reactors (from 54.1-35.1%). Overall, continuous addition of exogenous GB did not improve the thermotolerance of mesophilic anammox consortia at 45°C.

Response Characteristics of Nitrifying Bacteria and Archaea Community Involved in Nitrogen Removal and Bioelectricity Generation in Integrated Tidal Flow Constructed Wetland-Microbial Fuel Cell

This study explores nitrogen removal performance, bioelectricity generation, and the response of microbial community in two novel tidal flow constructed wetland-microbial fuel cells (TFCW-MFCs) when treating synthetic wastewater under two different chemical oxygen demand/total nitrogen (COD/TN, or simplified as C/N) ratios (10:1 and 5:1). The results showed that they achieved high and stable COD, NH₄ ⁺-N, and TN removal efficiencies. Besides, TN removal rate of TFCW-MFC was increased by 5-10% compared with that of traditional CW-MFC. Molecular biological analysis revealed that during the stabilization period, a low C/N ratio remarkably promoted diversities of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in the cathode layer, whereas a high one enhanced the richness of nitrite-oxidizing bacteria (NOB) in each medium; the dominant genera in AOA, AOB, and NOB were Candidatus Nitrosotenuis, Nitrosomonas, and Nitrobacter. Moreover, a high C/N ratio facilitated the growth of Nitrosomonas, while it inhibited the growth of Candidatus Nitrosotenuis. The distribution of microbial community structures in NOB was separated by space rather than time or C/N ratio, except for Nitrobacter. This is caused by the differences of pH, dissolved oxygen (DO), and nitrogen concentration. The response of microbial community characteristics to nitrogen transformations and bioelectricity generation demonstrated that TN concentration is significantly negatively correlated with AOA-shannon, AOA-chao, 16S rRNA V4-V5-shannon, and 16S rRNA V4-V5-chao, particularly due to the crucial functions of Nitrosopumilus, Planctomyces, and Aquicella. Additionally, voltage output was primarily influenced by microorganisms in the genera of Nitrosopumilus, Nitrosospira, Altererythrobacter, Gemmata, and Aquicella. This study not only presents an applicable tool to treat high nitrogen-containing wastewater, but also provides a theoretical basis for the use of TFCW-MFC and the regulation of microbial community in nitrogen removal and electricity production.

The occurrence and role of Nitrospira in nitrogen removal systems

Application of the modern microbial techniques changed the paradigm about the microorganisms performing nitrification. Numerous investigations recognized representatives of the genus Nitrospira as a key and predominant nitrite-oxidizing bacteria in biological nutrient removal systems, especially under low dissolved oxygen and substrate conditions. The recent discovery of Nitrospira capable of performing complete ammonia oxidation (comammox) raised a fundamental question about the actual role of Nitrospira in both nitrification steps. This review summarizes the current knowledge about morphological, physiological and genetic characteristics of the canonical and comammox Nitrospira. Potential implications of comammox for the functional aspects of nitrogen removal have been highlighted. The complex meta-analysis of literature data was applied to identify specific individual variables and their combined interactions on the Nitrospira abundance. In addition to dissolved oxygen and influent nitrogen concentrations, temperature and pH may play an important role in enhancing or suppressing the Nitrospira activity.

Enhancement of biological nitrogen removal performance using novel carriers based on the recycling of waste materials

This study aims to enhance biological nitrogen removal performance by the innovative carbon-based carriers. The new carriers were produced based on recycling waste materials. In these carriers, the advantages of the hybrid system and physicochemical properties of activated carbon were integrated to promote microbial attachment. To verify the performance of the new carriers compared to the conventional moving carriers, the experiments were conducted in two parallel laboratory-scale sequencing batch reactors under various operating conditions. The analysis revealed that the specific surface area of the new carrier with a total pore volume of 0.0015cm³/gr was 10.9 times the specific surface area of a conventional carrier. Further, the comparative results indicated that the new highly porous carriers made a major contribution to increasing the attached active biomass up to 20.2%. From the data analysis (DO, ORP, and pH), it was also confirmed that the new carriers had a positive effect on the creation of a greater anoxic zone within the biofilm. Consequently, the simultaneous nitrification-denitrification and total nitrogen removal efficiencies enhanced significantly up to 14.3% and 16.8%, respectively. From the environmental and economic viewpoints, the benefits of the novel carrier showed that it is a practical alternative for the conventional carrier providing a cost-effective wastewater treatment technology.

Selective enrichment of heterotrophic nitrifiers Alcaligenaceae and Alcanivorax spp. from industrial wastewaters

Removal of nitrogen from wastewaters (WW) represents a global problem. The low nitrification rate during WW treatment is often caused by ecotoxicity. This problem is attributed mostly to the industrial WW. Our study was focused on the testing of industrial WW and activated sludge (AS) with the aim to reveal the abundance of nitrifiers and increase their biomass, thus, providing the additional step, i.e., bioaugmentation, within the technological process of WW treatment. Plating of AS on the selective solidified media designated for the 1st and 2nd nitrification stages, resulted in the shift in bacterial community structure with dominated Alcaligenaceae and Alcanivorax for the 1st stage, and Alcanivorax-for the 2nd stage of nitrification, respectively. Incubation of AS in the presence of real WW and selective nitrification broth resulted in a considerable increase (one or two magnitudes in the presence of the 1st and 2nd stage nitrification broth, respectively) of culturable nitrifiers after 5 days incubation under aerated conditions. The obtained data provide with evidence about a possibility to strengthen the role of heterotrophic nitrifiers in the treatment of industrial WW, where toxicity obstacles inhibited nitrification under conventional conditions.

Performance of nitrogen removal in an alternating activated sludge reactor for full-scale applications

A novel wastewater treatment process, known as an alternating activated sludge reactor (AASR), is proposed to treat wastewater in full-scale operations. The AASR is a technical development based on the sequencing batch reactor (SBR) and cyclic activated sludge technology (CAST). The performance of AASR was evaluated in this study and found to be effective for the removal of pollutants. The average effluent NH₄⁺-N, TN, TP, and COD concentrations were 0.5, 17, 0.8, and 40 mgL^-1, respectively. The corresponding average removal efficiencies were 97%, 59%, 83%, and 83%, respectively, indicating that the AASR was also a successful operating system for the removal of organic matter. The AASR has many advantages, such as successive filling, high removal efficiency, high stability and reliability, low area requirement, no sludge circulation reflux, and low construction costs. The operation mode of the alternating anoxic, anaerobic, and aerobic conditions displayed a higher efficiency for nitrification than that of conventional SBR. The effective mode for denitrification was a step-feed. The control program of the AASR is highly flexible and can easily be modified by a plant manager to meet various loading requirements.

A Rapid Assay to Assess Nitrification Inhibition Using a Panel of Bacterial Strains and Partial Least Squares Modeling

As a proof of concept, a rapid assay consisting of a cell-based biosensor (CBB) panel of pure bacterial strains, a fluorescent dye, and partial least squares (PLS) modeling was developed to assess the nitrification inhibition potential of industrial wastewater (WW) samples. The current standard method used to assess the nitrification inhibition potential is the specific nitrification rate (SNR) batch test, which requires approximately 4 h to complete under the watch of an experienced operator. In this study, we exposed the CBB panel of seven bacterial strains (nitrifying and non-nitrifying) to 28 different industrial WW samples and then probed both the membrane integrity and cellular activity using a commercially available "live/dead" fluorescent dye. The CBB panel response acts as a surrogate measurement for the performance of nitrification. Of the seven strains, four (Nitrospira, Escherichia coli, Bacillus subtilis, Bacillus cereus) were identified via the modeling technique to be the most significant contributors for predicting the nitrification inhibition potential. The key outcome from this work is that the CBB panel fluorescence data (collected in approximately 10 min) can accurately predict the outcome of an SNR batch test (that takes 4 h) when performed with the same WW samples and has a strong potential to approximate the chemical composition of these WW samples using PLS modeling. Overall, this is a powerful technique that can be used for point-of-use detection of nitrification inhibition.

Acclimation of nitrifying biomass to phenol leads to persistent resistance to inhibition

It is common that biological wastewater-treatment processes are exposed to inputs of toxic compounds, such as phenolics. Due to their slow growth rate, nitrifying bacteria are most susceptible to inhibition that can lead to loss of nitrification capacity. Here, a microbial community containing nitrifying bacteria was acclimated to phenol, and it developed resistance to phenol inhibition and maintained nitrification activity. For the phenol-acclimated biomass, the NH₄⁺-N removal rates were almost unaffected when it was suddenly exposed to phenol. Heterotrophic synthesis and nitrification rates contributed 76% and 24% of the total NH₄⁺-N removal respectively during phenol removal, but the nitrification rate increased significantly once phenol was removed and mineralized. In contrast, the NH₄⁺-N removal rates decreased sharply for normal (unacclimated) nitrifying biomass when it was exposed to phenol. The phenol-acclimated biomass retained its resistance to phenol inhibition for at least two months after acclimation, and addition of the phenol-acclimated biomass to the normal biomass conferred resistance to phenol inhibition. Community analysis of the phenol-acclimated biomass showed an increase in families known to contain strains able to biodegrade phenolics. Taken together, the results indicate that the main impact of phenol acclimation was enrichment of phenol-biodegrading bacteria, which allowed rapid removal and mineralization of phenol and, consequently, alleviation of phenol's inhibition of nitrification.

Bio-carrier and operating temperature effect on ammonia removal from secondary wastewater effluents using moving bed biofilm reactor (MBBR)

This study investigates the impact of bio-carriers' surface area and shape, wastewater chemistry and operating temperature on ammonia removal from real wastewater effluents using Moving bed biofilm reactors (MBBRs) operated with three different AnoxKaldness bio-carriers (K_3, K_5, and M). The study concludes the surface area loading rate, specific surface area, and shape of bio-carrier affect ammonia removal under real conditions. MBBR kinetics and sensitivity for temperature changes were affected by bio-carrier type. High surface area bio-carriers resulted in low ammonia removal and bio-carrier clogging. Significant ammonia removals of 1.420 ± 0.06 and 1.103 ± 0.06 g - N/m². d were achieved by K₃(A_s = 500 m²/m³) at 35 and 20 °C, respectively. Lower removals were obtained by high surface area bio-carrier K₅ (1.123 ± 0.06 and 0.920 ± 0.06 g - N/m². d) and M (0.456 ± 0.05 and 0.295 ± 0.05 g - N/m². d) at 35 and 20 °C, respectively. Theta model successfully represents ammonia removal kinetics with θ values of 1.12, 1.06 and 1.13 for bio-carrier K₃, K₅ and M respectively. MBBR technology is a feasible choice for treatment of real wastewater effluents containing high ammonia concentrations.

Mechanistic understanding of the NOB suppression by free ammonia inhibition in continuous flow aerobic granulation bioreactors

A partial nitritation continuous flow reactor (CFR) was operated for eight months demonstrating that partial nitritation granular sludge can remain stable under continuous flow conditions. The ammonia oxidizing bacteria (AOB)-to-nitrite oxidizing bacteria (NOB) activity ratios were determined for a series of granule sizes to understand the impact of mass diffusion limitation on the free ammonia (FA) inhibition of NOB. When dissolved oxygen (DO) limitation is the only mechanism for NOB suppression, the AOB:NOB ratio was usually found to increase with the granule size. However, the trend is reversed when FA has an inhibitory effect on NOB, as was observed in this study. The decrease in AOB:NOB ratio indicates that smaller granules, e.g. diameter <150 μm, are preferred for nitrite accumulation when high FA concentration is present, as in the partial nitritation process. The trend was further verified by observing the increase in the apparent inhibition coefficient as granule size increased. Indeed, this study for the first time quantified the effect of diffusion limitation on the apparent inhibition coefficient of NOB in aerobic granules. A mathematical model was then utilized to interpret the observed suppression of NOB and predicted that NOB suppression was only complete at the granule surface. The NOB that did survive in larger granules was forced to dwell within the granule interior, where the AOB growth declines due to DO diffusion limitation. This means FA inhibition can be taken advantage of as an effective means for NOB suppression in small granules or thin biofilms. Further, both FA inhibition and DO limitation were found to be required for the suppression of NOB in mainstream aerobic granules.

Controlling nitritation in a continuous split-feed/aeration biofilm nitrifying bioreactor

This study explored the stability of partial ammonium oxidation at low feed concentration (50 g N/m³), suitable for anammox process, in continuous fixed bed up-flow biofilm reactors with external recirculation-aeration. The reactors, filled with crushed basalt, were fed with synthetic medium at 20-25 °C at constant flow-rate with limiting dissolved oxygen concentration controlled by the recirculation ratio (R). Successful nitritation was achieved at R ≅ 4-6 with approx. 50% of NH₄⁺ oxidized to NO₂^- with <5% NO₃^-accumulation. q-PCR analysis along the reactor showed ammonia oxidizing bacteria being the prevalent nitrifiers over the three-fourths of the bed in the flow direction, negligible denitrifiers and absent ammonium oxidizing archaea. A numerical model for predicting the concentration of the nitrogen species and DO was formulated. The model successfully predicted the experimental results and displayed good sensitivity to intrinsic oxygen uptake parameters. The proposed numerical model can serve both as an operational and design tool.

Temporal variation of bacterial population and response to physical and chemical parameters along a petrochemical industry wastewater treatment plant

The petrochemical industry has played a considerable role in generation and release of waste in the environment. Activated sludge and facultative lagoons are commonly used for domestic and industrial wastewater treatment due to their low-cost and minimal need for operational requirements. Microorganisms present in wastewater treatment plant (WWTP) are responsible for most nutrient removal. In this study, microbiological and physicochemical parameters were used to estimate changes in bacterial community in a petrochemical industrial WWTP. The activated sludge was the place with higher heterotrophic bacterial quantification. Denitrifying bacteria was reduced at least 5.3 times throughout all collections samples. We observe a decrease in the total Kjeldahl nitrogen, oxygen demand and phosphate throughout the WWTP. In this work, we also use Matrix-Assisted Laser Desorption Ionisation-Time-of-Flight Mass Spectrometry (MALDI-TOF MS) for bacteria isolates identification comparing with 16S rDNA sequencing. The MALDI-TOF MS allowed the identification of 93% of the isolates and only 5% show different results from 16S rDNA sequencing showing that the MALDI-TOF MS can be a tool for identifying environmental bacteria. The observation of microbial community dynamics in the WWTP is important in order to understand the functioning of the ecological structure formed in a specific environment.

Long-term operation and autotrophic nitrogen conversion process analysis in a biofilter that simultaneously removes Fe, Mn and ammonia from low-temperature groundwater

One lab-scale biofilter that simultaneously removes Fe, Mn and ammonia from 4 °C groundwater was established to investigate the nitrogen conversion process. The results showed that 333 days were needed to achieve the required standards for Fe, Mn and ammonia under a filtration rate of 3 m/h. Effluent nitrite concentration was the key factor determining the final operation parameters. Both nitrification and anaerobic ammonium oxidation (ANAMMOX) contributed to nitrogen conversion. The calculation results demonstrated that autotrophic nitrogen removal proportion was about 15.92% in steady operation period. Meanwhile, 7 genera of Mn oxidizing bacteria (MnOB) were detected; Candidatus Brocadia was the only detected ANAMMOX genera. The corresponding functional oxidizing bacteria could be acclimated sufficiently in biofilter treating low-temperature groundwater.

Effect of temperature on nitrogen removal and biological mechanism in an up-flow microaerobic sludge reactor treating wastewater rich in ammonium and lack in carbon source

Previous study has demonstrated that microaerobic process is effective in nitrogen removal from the wastewater with high ammonium and low carbon to nitrogen ratio. In the microaerobic system, synergistic action of anammox, ammonia oxidizing bacteria (AOB), nitrite oxidizing bacteria (NOB) and denitrifiers was the key issues to remove nitrogen from the wastewater rich in ammonium. Temperature has a significant effect on specific growth rate and activity of various nitrogen removal functional bacteria. In this study, the effect of temperature (35 °C-15 °C) on nitrogen removal were investigated in an up-flow microaerobic sludge reactor (UMSR) at the HRT of 8 h and reflux ratio of 45. Above 71.2% of total nitrogen (TN) and 80.7% of NH₄⁺ removal efficiencies were observed at the temperature no less than 17 °C. With the temperature further decreasing to 15 °C, denitrifiers still dominant the UMSR, but AOB, NOB and Candidatus Brocadia as the predominant anammox bacteria were inhibited revealed by high throughput sequencing, resulting in the decrease of TN and NH₄⁺ removal to 39.7% and 61.8%, respectively. Fortunately, when the temperature rebounded to 20 °C, a higher TN and NH₄⁺ removal of 81.2% and 97.3% were obtained again in the UMSR.

Effective partial nitrification of ammonia in a fluidized bed bioreactor

A lab-scale fluidized bed bioreactor with high-density polyethylene as biofilm carrier media was operated to study partial nitrification (PN) performance with high ammonia concentrations. The system was run at nitrogen loading rates (NLRs) from 1.2 to 4.8 kg N/(m³ d) with empty bed contact time of 2.0 and 2.7 h and four different influent ammonia concentrations of 100, 200, 300 and 400 mg/L. Dissolved oxygen concentration and temperature were maintained around 1.3 mg/L and 35°C, respectively. Stable PN was successfully achieved during the whole period with low effluent NO₃-N concentration at less than 15 mg/L, due to effective suppression of nitrite-oxidizing bacteria activity at high concentrations of free ammonia (5.3-27.3 mg N/L) and low alkalinity-to-ammonia ratio. At the NLR of 3.6 kg N/(m³ d), NH₄-N conversion and NO₂-N accumulation ratios were 57.8% and 53.9%, respectively, which could be further used in the anaerobic ammonium oxidation process (ANAMMOX) as the effluent NO₂-N/NH₄-N ratio was 1.27.

The more important role of archaea than bacteria in nitrification of wastewater treatment plants in cold season despite their numerical relationships

Nitrification failure of wastewater treatment plants (WWTPs) in cold season calls into investigations of the functional ammonia-oxidizing microorganisms (AOMs). In this study, we report the abundance of ammonia-oxidizing archaea (AOA), bacteria (AOB) and complete ammonia-oxidizing (comammox) Nitrospira in 23 municipal WWTPs in cold season, and explore the correlations between AOMs abundance and their relative contribution to nitrification. The copy numbers of AOA and AOB amoA gene ranged from 2.42 × 10⁷ to 2.47 × 10⁹ and 5.54 × 10⁶ to 3.31 × 10⁹ copies/g sludge, respectively. The abundance of amoA gene of Candidatus Nitrospira inopinata, an important strain of comammox Nitrospira, was stable with averaged abundance of 8.47 × 10⁶ copies/g sludge. DNA-based stable isotope probing (DNA-SIP) assays were conducted with three typical WWTPs in which the abundance of AOA was lower than, similar to and higher than that of AOB, respectively. The results showed that considerable ¹³C-assimilation by AOA was detected during active nitrification in all WWTPs, whereas just a much lesser extent of ¹³C-incorporation by AOB and comammox Nitrospira was found in one WWTP. High-throughput sequencing with ¹³C-labeled DNA also showed the higher reads abundance of AOA than AOB and comammox Nitrospira. Nitrososphaera viennensis was the dominant active AOA, while Nitrosomonas oligotropha and Nitrosomonas europaea were identified as active AOB. The results obtained suggest that AOA, rather than AOB and comammox Nitrospira, dominate ammonia oxidation in WWTPs in cold season despite the numerical relationships of AOMs.

System-level model and experiments for irrigation water alkalinity reduction and enrichment using an atmospheric pressure dielectric barrier discharge

The treatment of distilled water with varying amounts of dissolved sodium bicarbonate (representing alkalinity) is considered using an atmospheric pressure electrical discharge. The discharge ignited between a capillary tube (used as powered electrode) and a ground electrode wrapped around the beaker holding the treated water consists of streamers propagating in ambient air and striking the water surface. The streamer interaction with water is shown to lead to a decrease in pH and an increase in nitrate concentration. The pH variation with time is shown to be similar to a titration curve for acid-base neutralization with final pH values around 3 for 22 min of treatment. The nitrate ion concentration increase with time is consistent with a two-rate system-level model that is characterized by two asymptotic rates for NO₃^- creation by the plasma. The two asymptotic rates are calibrated to be about 2.7 μmol/min and 22.5 μmol/min with the transition between the two rates occurring at the breakeven time that is representative of the time required for all dissolved bicarbonate to be consumed by the plasma treatment. The increase in rate of NO₃^- creation at the breakeven time is attributed to the increase in conductivity of the treated solution once all bicarbonate is consumed thereby modifying the plasma properties. Another system-level model that is based on the observed pH variation is also considered for comparison with measured data. While both system-level models have some discrepancies with the measurements, the two-rate model based on the nitrate ion concentration is concluded to be more useful for determining the NO₃^- formation rates in the context of irrigation water enrichment. The discrepancies are attributed to the simplicity of the system-level models considered here where the effect of the plasma is completely represented by the creation of just one chemical species in HNO₃ thereby neglecting potentially important species such as HNO₂ and H₂O₂. Nevertheless, the proposed system-level model could greatly assist in the design of plasma treatment systems with specified alkalinity, pH and nitrate ion levels for irrigation water.

The role of COD/N ratio on the start-up performance and microbial mechanism of an upflow microaerobic reactor treating piggery wastewater

This study investigated the role of COD/N ratio on the start-up and performance of an upflow microaerobic sludge reactor (UMSR) treating piggery wastewater at 0.5 mgO₂/L. At high COD/N ratio (6.24 and 4.52), results showed that the competition for oxygen between ammonia-oxidizing bacteria, nitrite-oxidizing bacteria and heterotrophic bacteria limited the removal of nitrogen. Nitrogen removal efficiency was below 40% in both scenarios. Decreasing the influent COD/N ratio to 0.88 allowed achieving high removal efficiencies for COD (∼75%) and nitrogen (∼85%) due to the lower oxygen consumption for COD mineralization. Molecular biology techniques showed that nitrogen conversion at a COD/N ratio 0.88 was dominated by the anammox pathway and that Candidatus Brocadia sp. was the most important anammox bacteria in the reactor with a relative abundance of 58.5% among the anammox bacteria. Molecular techniques also showed that Nitrosomonas spp. was the major ammonia-oxidiser bacteria (relative abundance of 86.3%) and that denitrification via NO₃^- and NO₂^- also contributed to remove nitrogen from the system.

Filamentous bacteria in the nitrifying activated sludge

Filamentous bacteria in addition to wastewater treatment are responsible for the shape of flocs and sedimentation properties of activated sludge. Their dynamics in activated sludge influences the performance of the whole sewage treatment plant. Therefore the composition of activated sludge biocenosis and its dynamics in the nitrification process were investigated. Four laboratory-scale activated sludge membrane bioreactors fed with wastewater highly concentrated with ammonium (synthetic wastewater imitating landfill leachate) were operated to obtain a high rate of nitrification. The sludge age was 8, 12, 24 and 32 days. An additional fifth reactor was conventionally ammonium loaded at 12-day sludge age and served as the reference. A shift in filamentous bacteria population was observed in all operated reactors. There was no influence of sludge age on composition or abundance of filamentous biocenosis. In high ammonium loaded activated sludge Nostocoida limicola, Haliscomenobacter hydrossis and also Type 021N were the most abundant filamentous bacteria. In the reference reactor Type 021N and Sphaerotilus natans dominated the activated sludge.

Coupling model of aerobic waste degradation considering temperature, initial moisture content and air injection volume

A quantitative description of aerobic waste degradation is important in evaluating landfill waste stability and economic management. This research aimed to develop a coupling model to predict the degree of aerobic waste degradation. On the basis of the first-order kinetic equation and the law of conservation of mass, we first developed the coupling model of aerobic waste degradation that considered temperature, initial moisture content and air injection volume to simulate and predict the chemical oxygen demand in the leachate. Three different laboratory experiments on aerobic waste degradation were simulated to test the model applicability. Parameter sensitivity analyses were conducted to evaluate the reliability of parameters. The coupling model can simulate aerobic waste degradation, and the obtained simulation agreed with the corresponding results of the experiment. Comparison of the experiment and simulation demonstrated that the coupling model is a new approach to predict aerobic waste degradation and can be considered as the basis for selecting the economic air injection volume and appropriate management in the future.

Good servant, bad master: sulfide influence on partial nitritation of sewage

When applying partial nitritation (PN) to anaerobically pre-treated sewage, ammonium oxidizing bacteria (AOB) and nitrite oxidizing bacteria (NOB) will be exposed to dissolved sulfide and methane. Both sulfide and methane may inhibit nitrification. To gain knowledge necessary for sustaining PN under these conditions, we exposed an AOB enrichment and a mixed nitrifying culture to dissolved sulfide and methane. In the mixed nitrifying culture, sulfide selectively inhibited NOB activity (K_I,AOB1 = 150 mg-S L^-1, K_I,NOB = 10 mg-S L^-1) which shows that sulfide may help establish PN. The AOB enrichment showed similar K_I,AOB2 (130 mg-S L^-1), but nitritation activity lagged longer than the time necessary to remove sulfide from the liquid. This demonstrates that feeding of sulfide into established PN should be avoided. Methane inhibition of AOB enrichment was assessed in batch assays with 10 mg-CH₄ L^-1. As compared to control without methane, AOB enrichment activity was identical. Up to 51% of methane was converted to methanol, thus reducing the greenhouse gas emissions.

Effects of the chemical characteristics and concentration of inorganic suspended solids on nitrification in freshwater

The effect of inorganic suspended solids (ISS) on nitrification in freshwater samples has been described inconsistently and remains unclear. This study therefore investigated the effects of the chemical characteristics and concentration of ISS on the nitrification rate by focusing on Nitrosomonas europaea and Nitrobacter winogradskyi as the two most dominant nitrification species in freshwater. Batch-wise experiments were conducted using three chemically well-characterized ISS (i.e. the clay minerals montmorillonite, sericite, and kaolinite in the concentration range 0-1,000 mg L^-1). The results show that the ammonium oxidation rate constant (k_NH4) was significantly affected by the ISS type, whereas changes in the ISS concentration had an insignificant effect on k_NH4, except for kaolinite. The highest k_NH4 was observed in samples containing sericite (k_NH4, 0.067 L mg^-1 day^-1), followed by samples containing montmorillonite (k_NH4, 0.044 L mg^-1 day^-1). The ammonium oxidation rate was low in the control and kaolinite samples. Nitrite oxidation was enhanced in the presence of all types of ISS. The rate constants of ISS-mediated nitrite oxidation (k_NO2, 0.13-0.21 L mg^-1 day^-1) were not significantly different among the three types of ISS, but k_NO2 was significantly affected by ISS concentration. Overall, our study indicated various effects of the ISS type and concentration on nitrification and, in particular, a notable positive effect of sericite.

Nitrifier Gene Abundance and Diversity in Sediments Impacted by Acid Mine Drainage

Extremely acidic and metal-rich acid mine drainage (AMD) waters can have severe toxicological effects on aquatic ecosystems. AMD has been shown to completely halt nitrification, which plays an important role in transferring nitrogen to higher organisms and in mitigating nitrogen pollution. We evaluated the gene abundance and diversity of nitrifying microbes in AMD-impacted sediments: ammonia-oxidizing archaea (AOA), ammonia-oxidizing bacteria (AOB), and nitrite-oxidizing bacteria (NOB). Samples were collected from the Iron Springs Mining District (Ophir, CO, United States) during early and late summer in 2013 and 2014. Many of the sites were characterized by low pH (<5) and high metal concentrations. Sequence analyses revealed AOA genes related to Nitrososphaera, Nitrosotalea, and Nitrosoarchaeum; AOB genes related to Nitrosomonas and Nitrosospira; and NOB genes related to Nitrospira. The overall abundance of AOA, AOB and NOB was examined using quantitative PCR (qPCR) amplification of the amoA and nxrB functional genes and 16S rRNA genes. Gene copy numbers ranged from 3.2 × 10⁴ – 4.9 × 10⁷ archaeal amoA copies ∗ μg DNA^-1, 1.5 × 10³ – 5.3 × 10⁵ AOB 16S rRNA copies ∗ μg DNA^-1, and 1.3 × 10⁶ – 7.7 × 10⁷Nitrospira nxrB copies ∗ μg DNA^-1. Overall, Nitrospira nxrB genes were found to be more abundant than AOB 16S rRNA and archaeal amoA genes in most of the sample sites across 2013 and 2014. AOB 16S rRNA and Nitrospira nxrB genes were quantified in sediments with pH as low as 3.2, and AOA amoA genes were quantified in sediments as low as 3.5. Though pH varied across all sites (pH 3.2–8.3), pH was not strongly correlated to the overall community structure or relative abundance of individual OTUs for any gene (based on CCA and Spearman correlations). pH was positivity correlated to the total abundance (qPCR) of AOB 16S rRNA genes, but not for any other genes. Metals were not correlated to the overall nitrifier community composition or abundance, but were correlated to the relative abundances of several individual OTUs. These findings extend our understanding of the distribution of nitrifying microbes in AMD-impacted systems and provide a platform for further research.

Multivariate statistical assessment of a polluted river under nitrification inhibition in the tropics

A large complex water quality data set of a polluted river, the Tay Ninh River, was evaluated to identify its water quality problems, to assess spatial variation, to determine the main pollution sources, and to detect relationships between parameters. This river is highly polluted with organic substances, nutrients, and total iron. An important problem of the river is the inhibition of the nitrification. For the evaluation, different statistical techniques including cluster analysis (CA), discriminant analysis (DA), and principal component analysis (PCA) were applied. CA clustered 10 water quality stations into three groups corresponding to extreme, high, and moderate pollution. DA used only seven parameters to differentiate the defined clusters. The PCA resulted in four principal components. The first PC is related to conductivity, NH4-N, PO4-P, and TP and determines nutrient pollution. The second PC represents the organic pollution. The iron pollution is illustrated in the third PC having strong positive loadings for TSS and total Fe. The fourth PC explains the dependence of DO on the nitrate production. The nitrification inhibition was further investigated by PCA. The results showed a clear negative correlation between DO and NH4-N and a positive correlation between DO and NO3-N. The influence of pH on the NH4-N oxidation could not be detected by PCA because of the very low nitrification rate due to the constantly low pH of the river and because of the effect of wastewater discharge with very high NH4-N concentrations. The results are deepening the understanding of the governing water quality processes and hence to manage the river basins sustainably.

Enrichment and characterization of acid-tolerant nitrifying sludge

Nitrification is an acidifying process that requires the addition of external alkalinity because of the alkaliphilic nature of the most ammonia-oxidizing bacteria. In this study, aerobic activated sludge was used as inoculum in an internal loop air-lift reactor, which resulted in successful enrichment of acid-tolerant nitrifying (ACIN) sludge at pH 6.0 by sequential addition of tea orchard soil suspension. The results showed that ACIN sludge had a remarkable acid tolerant capability with a volumetric ammonia conversion rate of 1.13 kg N m^-3 day^-1. ACIN sludge showed a higher maximum specific ammonia conversion rate (0.29 g N g^-1 VSS day^-1) than neutrophilic nitrifying sludge (0.14 g N g^-1 VSS day^-1) at pH 6.0 and had good resistance against pH fluctuations, with a maximum specific ammonia conversion rate (0.584 g N g^-1 VSS day^-1) at pH 7.5. Microbial community analysis indicated that the higher abundance of acid tolerant Nitrosospira and ammonia-oxidizing archaea laid a solid foundation for the remarkable acid-tolerant capability of ACIN sludge.

Nitrous oxide and methane emissions during storage of dewatered digested sewage sludge

This study investigated the effect on greenhouse gas emissions during storage of digested sewage sludge by using a cover during storage or applying sanitisation measures such as thermophilic digestion or ammonia addition. In a pilot-scale storage facility, nitrous oxide and methane emissions were measured on average twice monthly for a year, using a closed chamber technique. The thermophilically digested sewage sludge (TC) had the highest cumulative emissions of nitrous oxide (1.30% of initial total N) followed by mesophilically digested sewage sludge stored without a cover (M) (0.34%) and mesophilically digested sewage sludge stored with a cover (MC) (0.19%). The mesophilically digested sewage sludge sanitised with ammonia and stored with a cover (MAC) showed negligible cumulative emissions of nitrous oxide. Emissions of methane were much lower from TC and MAC than from M and MC. These results indicate that sanitisation by ammonia treatment eliminates the production of nitrous oxide and reduces methane emissions from stored sewage sludge, and that thermophilic digestion has the potential to reduce the production of methane during storage compared with mesophilic digestion. The results also indicate a tendency for lower emissions of nitrous oxide and higher emissions of methane from covered sewage sludge compared with non-covered.