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For: Bishop RE. The bacterial lipocalins. Biochim Biophys Acta 2000;1482:73-83. [PMID: 11058749 DOI: 10.1016/s0167-4838(00)00138-2] [Citation(s) in RCA: 73] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Number Cited by Other Article(s)
1
Gennaris A, Nguyen VS, Thouvenel L, Csoma N, Vertommen D, Iorga BI, Remaut H, Collet JF. Optimal functioning of the Lpt bridge depends on a ternary complex between the lipocalin YedD and the LptDE translocon. Cell Rep 2025;44:115446. [PMID: 40127101 DOI: 10.1016/j.celrep.2025.115446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2024] [Revised: 01/17/2025] [Accepted: 02/27/2025] [Indexed: 03/26/2025]  Open
2
Nong L, Jonker M, de Leeuw W, Wortel MT, ter Kuile B. Progression of ampC amplification during de novo amoxicillin resistance development in E. coli. mBio 2025;16:e0298224. [PMID: 39704543 PMCID: PMC11796351 DOI: 10.1128/mbio.02982-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2024] [Accepted: 12/02/2024] [Indexed: 12/21/2024]  Open
3
Maciel-Guerra A, Babaarslan K, Baker M, Rahman A, Hossain M, Sadique A, Alam J, Uzzaman S, Ferdous Rahman Sarker M, Sultana N, Islam Khan A, Ara Begum Y, Hassan Afrad M, Senin N, Hossain Habib Z, Shirin T, Qadri F, Dottorini T. Core and accessory genomic traits of Vibrio cholerae O1 drive lineage transmission and disease severity. Nat Commun 2024;15:8231. [PMID: 39313510 PMCID: PMC11420230 DOI: 10.1038/s41467-024-52238-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2024] [Accepted: 08/30/2024] [Indexed: 09/25/2024]  Open
4
Ferreira CM, Naveca FG, Ferreira GMA, Barbosa MDNS, de Souza VC, Calheiros FO, Souza VS, Ferreira WA. Whole-Genome Analysis of Extensively Drug-Resistant Enterobacter hormaechei Isolated from a Patient with Non-Hodgkin's Lymphoma. Genes (Basel) 2024;15:814. [PMID: 38927749 PMCID: PMC11202416 DOI: 10.3390/genes15060814] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Revised: 06/13/2024] [Accepted: 06/17/2024] [Indexed: 06/28/2024]  Open
5
Ekim Kocabey A, Schneiter R. Human lipocalins bind and export fatty acids through the secretory pathway of yeast cells. Front Microbiol 2024;14:1309024. [PMID: 38328584 PMCID: PMC10849133 DOI: 10.3389/fmicb.2023.1309024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2023] [Accepted: 12/12/2023] [Indexed: 02/09/2024]  Open
6
Ji X, Pan X. Intra-/extra-cellular antibiotic resistance responses to sewage sludge composting and salinization of long-term compost applied soils. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022;838:156263. [PMID: 35644396 DOI: 10.1016/j.scitotenv.2022.156263] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2022] [Revised: 05/22/2022] [Accepted: 05/23/2022] [Indexed: 06/15/2023]
7
Sheldon JR, Himmel LE, Kunkle DE, Monteith AJ, Maloney KN, Skaar EP. Lipocalin-2 is an essential component of the innate immune response to Acinetobacter baumannii infection. PLoS Pathog 2022;18:e1010809. [PMID: 36054235 PMCID: PMC9477428 DOI: 10.1371/journal.ppat.1010809] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 09/15/2022] [Accepted: 08/12/2022] [Indexed: 12/11/2022]  Open
8
Naguib M, Feldman N, Zarodkiewicz P, Shropshire H, Biamis C, El-Halfawy OM, McCain J, Dezanet C, Décout JL, Chen Y, Cosa G, Valvano MA. An evolutionary conserved detoxification system for membrane lipid-derived peroxyl radicals in Gram-negative bacteria. PLoS Biol 2022;20:e3001610. [PMID: 35580139 PMCID: PMC9113575 DOI: 10.1371/journal.pbio.3001610] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2021] [Accepted: 03/18/2022] [Indexed: 11/30/2022]  Open
9
Ackermann YS, Li WJ, Op de Hipt L, Niehoff PJ, Casey W, Polen T, Köbbing S, Ballerstedt H, Wynands B, O'Connor K, Blank LM, Wierckx N. Engineering adipic acid metabolism in Pseudomonas putida. Metab Eng 2021;67:29-40. [PMID: 33965615 DOI: 10.1016/j.ymben.2021.05.001] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2021] [Revised: 04/12/2021] [Accepted: 05/01/2021] [Indexed: 12/20/2022]
10
Burda PC, Crosskey T, Lauk K, Zurborg A, Söhnchen C, Liffner B, Wilcke L, Pietsch E, Strauss J, Jeffries CM, Svergun DI, Wilson DW, Wilmanns M, Gilberger TW. Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum. Cell Rep 2021;31:107817. [PMID: 32579913 DOI: 10.1016/j.celrep.2020.107817] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Revised: 04/19/2020] [Accepted: 06/03/2020] [Indexed: 02/06/2023]  Open
11
Bozhanova NG, Calcutt MW, Beavers WN, Brown BP, Skaar EP, Meiler J. Lipocalin Blc is a potential heme-binding protein. FEBS Lett 2021;595:206-219. [PMID: 33210733 PMCID: PMC8177097 DOI: 10.1002/1873-3468.14001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Revised: 11/05/2020] [Accepted: 11/06/2020] [Indexed: 11/09/2022]
12
Amino Acid k-mer Feature Extraction for Quantitative Antimicrobial Resistance (AMR) Prediction by Machine Learning and Model Interpretation for Biological Insights. BIOLOGY 2020;9:biology9110365. [PMID: 33126516 PMCID: PMC7694136 DOI: 10.3390/biology9110365] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Revised: 10/17/2020] [Accepted: 10/19/2020] [Indexed: 12/31/2022]
13
Luthra A, Montezuma-Rusca JM, La Vake CJ, LeDoyt M, Delgado KN, Davenport TC, Fiel-Gan M, Caimano MJ, Radolf JD, Hawley KL. Evidence that immunization with TP0751, a bipartite Treponema pallidum lipoprotein with an intrinsically disordered region and lipocalin fold, fails to protect in the rabbit model of experimental syphilis. PLoS Pathog 2020;16:e1008871. [PMID: 32936831 PMCID: PMC7521688 DOI: 10.1371/journal.ppat.1008871] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 09/28/2020] [Accepted: 08/10/2020] [Indexed: 12/18/2022]  Open
14
Pletneva NV, Goryacheva EA, Artemyev IV, Arkhipova SF, Pletnev VZ. Fluorescent Tags in Biology: Three-Dimensional Structure. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 2020. [DOI: 10.1134/s1068162020040160] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
15
Zhang YJ, Hu HW, Yan H, Wang JT, Lam SK, Chen QL, Chen D, He JZ. Salinity as a predominant factor modulating the distribution patterns of antibiotic resistance genes in ocean and river beach soils. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019;668:193-203. [PMID: 30851680 DOI: 10.1016/j.scitotenv.2019.02.454] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2018] [Revised: 02/18/2019] [Accepted: 02/28/2019] [Indexed: 06/09/2023]
16
Nepal S, Bonn F, Grasso S, Stobernack T, de Jong A, Zhou K, Wedema R, Rosema S, Becher D, Otto A, Rossen JW, van Dijl JM, Bathoorn E. An ancient family of mobile genomic islands introducing cephalosporinase and carbapenemase genes in Enterobacteriaceae. Virulence 2019;9:1377-1389. [PMID: 30101693 PMCID: PMC6177240 DOI: 10.1080/21505594.2018.1509666] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
17
Wahyudi A, Ariyani D, Ma G, Inaba R, Fukasawa C, Nakano R, Motohashi R. Functional analyses of lipocalin proteins in tomato. PLANT BIOTECHNOLOGY (TOKYO, JAPAN) 2018;35:303-312. [PMID: 31892817 PMCID: PMC6905218 DOI: 10.5511/plantbiotechnology.18.0620a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Accepted: 06/20/2018] [Indexed: 05/30/2023]
18
Transcriptional profiling of the mutualistic bacterium Vibrio fischeri and an hfq mutant under modeled microgravity. NPJ Microgravity 2018;4:25. [PMID: 30588486 PMCID: PMC6299092 DOI: 10.1038/s41526-018-0060-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2018] [Accepted: 11/05/2018] [Indexed: 02/06/2023]  Open
19
Vitamin E Increases Antimicrobial Sensitivity by Inhibiting Bacterial Lipocalin Antibiotic Binding. mSphere 2018;3:3/6/e00564-18. [PMID: 30541778 PMCID: PMC6291622 DOI: 10.1128/msphere.00564-18] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
20
Rolig AS, Sweeney EG, Kaye LE, DeSantis MD, Perkins A, Banse AV, Hamilton MK, Guillemin K. A bacterial immunomodulatory protein with lipocalin-like domains facilitates host-bacteria mutualism in larval zebrafish. eLife 2018;7:e37172. [PMID: 30398151 PMCID: PMC6219842 DOI: 10.7554/elife.37172] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2018] [Accepted: 10/04/2018] [Indexed: 02/06/2023]  Open
21
Lipocalins Are Required for Apical Extracellular Matrix Organization and Remodeling in Caenorhabditis elegans. Genetics 2017;207:625-642. [PMID: 28842397 DOI: 10.1534/genetics.117.300207] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Accepted: 08/22/2017] [Indexed: 12/11/2022]  Open
22
Bozhanova NG, Baranov MS, Klementieva NV, Sarkisyan KS, Gavrikov AS, Yampolsky IV, Zagaynova EV, Lukyanov SA, Lukyanov KA, Mishin AS. Protein labeling for live cell fluorescence microscopy with a highly photostable renewable signal. Chem Sci 2017;8:7138-7142. [PMID: 29147545 PMCID: PMC5676496 DOI: 10.1039/c7sc01628j] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2017] [Accepted: 08/01/2017] [Indexed: 11/21/2022]  Open
23
Antibiotic Capture by Bacterial Lipocalins Uncovers an Extracellular Mechanism of Intrinsic Antibiotic Resistance. mBio 2017;8:mBio.00225-17. [PMID: 28292982 PMCID: PMC5350466 DOI: 10.1128/mbio.00225-17] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
24
Mumm K, Ainsaar K, Kasvandik S, Tenson T, Hõrak R. Responses of Pseudomonas putida to Zinc Excess Determined at the Proteome Level: Pathways Dependent and Independent of ColRS. J Proteome Res 2016;15:4349-4368. [DOI: 10.1021/acs.jproteome.6b00420] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
25
Parker ML, Houston S, Pětrošová H, Lithgow KV, Hof R, Wetherell C, Kao WC, Lin YP, Moriarty TJ, Ebady R, Cameron CE, Boulanger MJ. The Structure of Treponema pallidum Tp0751 (Pallilysin) Reveals a Non-canonical Lipocalin Fold That Mediates Adhesion to Extracellular Matrix Components and Interactions with Host Cells. PLoS Pathog 2016;12:e1005919. [PMID: 27683203 PMCID: PMC5040251 DOI: 10.1371/journal.ppat.1005919] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Accepted: 09/08/2016] [Indexed: 12/02/2022]  Open
26
Plasmid and Host Strain Characteristics of Escherichia coli Resistant to Extended-Spectrum Cephalosporins in the Norwegian Broiler Production. PLoS One 2016;11:e0154019. [PMID: 27111852 PMCID: PMC4844124 DOI: 10.1371/journal.pone.0154019] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2016] [Accepted: 04/07/2016] [Indexed: 11/19/2022]  Open
27
Du ZP, Wu BL, Wu X, Lin XH, Qiu XY, Zhan XF, Wang SH, Shen JH, Zheng CP, Wu ZY, Xu LY, Wang D, Li EM. A systematic analysis of human lipocalin family and its expression in esophageal carcinoma. Sci Rep 2015;5:12010. [PMID: 26131602 PMCID: PMC4487233 DOI: 10.1038/srep12010] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2015] [Accepted: 06/11/2015] [Indexed: 02/05/2023]  Open
28
Hernández-Gras F, Boronat A. A hydrophobic proline-rich motif is involved in the intracellular targeting of temperature-induced lipocalin. PLANT MOLECULAR BIOLOGY 2015;88:301-11. [PMID: 25957952 PMCID: PMC4441748 DOI: 10.1007/s11103-015-0326-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2014] [Accepted: 04/27/2015] [Indexed: 05/05/2023]
29
An Integrated In Silico Approach for the Structural and Functional Exploration of Lipocalin 2 and its Functional Insights with Metalloproteinase 9 and Lipoprotein Receptor-Related Protein 2. Appl Biochem Biotechnol 2015;176:712-29. [DOI: 10.1007/s12010-015-1606-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2014] [Accepted: 04/06/2015] [Indexed: 12/17/2022]
30
Dassati S, Waldner A, Schweigreiter R. Apolipoprotein D takes center stage in the stress response of the aging and degenerative brain. Neurobiol Aging 2014;35:1632-42. [PMID: 24612673 PMCID: PMC3988949 DOI: 10.1016/j.neurobiolaging.2014.01.148] [Citation(s) in RCA: 102] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2013] [Revised: 01/17/2014] [Accepted: 01/30/2014] [Indexed: 02/08/2023]
31
Desai SH, Rabinovitch-Deere CA, Tashiro Y, Atsumi S. Isobutanol production from cellobiose in Escherichia coli. Appl Microbiol Biotechnol 2014;98:3727-36. [PMID: 24430208 DOI: 10.1007/s00253-013-5504-7] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2013] [Revised: 12/12/2013] [Accepted: 12/24/2013] [Indexed: 10/25/2022]
32
Kronfel CM, Kuzin AP, Forouhar F, Biswas A, Su M, Lew S, Seetharaman J, Xiao R, Everett JK, Ma LC, Acton TB, Montelione GT, Hunt JF, Paul CEC, Dragomani TM, Boutaghou MN, Cole RB, Riml C, Alvey RM, Bryant DA, Schluchter WM. Structural and biochemical characterization of the bilin lyase CpcS from Thermosynechococcus elongatus. Biochemistry 2013;52:8663-76. [PMID: 24215428 DOI: 10.1021/bi401192z] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
33
Genome-wide transcriptional profiling of the purple sulfur bacterium Allochromatium vinosum DSM 180T during growth on different reduced sulfur compounds. J Bacteriol 2013;195:4231-45. [PMID: 23873913 DOI: 10.1128/jb.00154-13] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
34
Shenderov BA. Metabiotics: novel idea or natural development of probiotic conception. MICROBIAL ECOLOGY IN HEALTH AND DISEASE 2013;24:20399. [PMID: 23990841 PMCID: PMC3747726 DOI: 10.3402/mehd.v24i0.20399] [Citation(s) in RCA: 76] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 01/09/2013] [Revised: 03/07/2013] [Accepted: 03/20/2013] [Indexed: 01/06/2023]
35
Veggi D, Gentile MA, Cantini F, Lo Surdo P, Nardi-Dei V, Seib KL, Pizza M, Rappuoli R, Banci L, Savino S, Scarselli M. The factor H binding protein of Neisseria meningitidis interacts with xenosiderophores in vitro. Biochemistry 2012;51:9384-93. [PMID: 23121397 DOI: 10.1021/bi301161w] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
36
Wu Y, Punta M, Xiao R, Acton TB, Sathyamoorthy B, Dey F, Fischer M, Skerra A, Rost B, Montelione GT, Szyperski T. NMR structure of lipoprotein YxeF from Bacillus subtilis reveals a calycin fold and distant homology with the lipocalin Blc from Escherichia coli. PLoS One 2012;7:e37404. [PMID: 22693626 PMCID: PMC3367933 DOI: 10.1371/journal.pone.0037404] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2012] [Accepted: 04/19/2012] [Indexed: 11/18/2022]  Open
37
Identification of genes in the σ²² regulon of Pseudomonas aeruginosa required for cell envelope homeostasis in either the planktonic or the sessile mode of growth. mBio 2012;3:mBio.00094-12. [PMID: 22589289 PMCID: PMC3372973 DOI: 10.1128/mbio.00094-12] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]  Open
38
Global analysis of the Nitrosomonas europaea iron starvation stimulon. Arch Microbiol 2011;194:305-13. [DOI: 10.1007/s00203-011-0778-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2010] [Revised: 09/28/2011] [Accepted: 12/02/2011] [Indexed: 10/14/2022]
39
Matte A, Grosse S, Bergeron H, Abokitse K, Lau PCK. Structural analysis of Bacillus pumilus phenolic acid decarboxylase, a lipocalin-fold enzyme. Acta Crystallogr Sect F Struct Biol Cryst Commun 2010;66:1407-14. [PMID: 21045284 PMCID: PMC3001637 DOI: 10.1107/s174430911003246x] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2010] [Accepted: 08/12/2010] [Indexed: 05/12/2023]
40
Chiu HJ, Bakolitsa C, Skerra A, Lomize A, Carlton D, Miller MD, Krishna SS, Abdubek P, Astakhova T, Axelrod HL, Clayton T, Deller MC, Duan L, Feuerhelm J, Grant JC, Grzechnik SK, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Kumar A, Marciano D, McMullan D, Morse AT, Nigoghossian E, Okach L, Paulsen J, Reyes R, Rife CL, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA. Structure of the first representative of Pfam family PF09410 (DUF2006) reveals a structural signature of the calycin superfamily that suggests a role in lipid metabolism. Acta Crystallogr Sect F Struct Biol Cryst Commun 2010;66:1153-9. [PMID: 20944205 PMCID: PMC2954199 DOI: 10.1107/s1744309109037749] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2009] [Accepted: 09/17/2009] [Indexed: 01/11/2023]
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Ozbalci Ç, Unsal Ç, Kazan D, Sariyar-Akbulut B. Proteomic response of Escherichia coli to the alkaloid extract of Papaver polychaetum. ANN MICROBIOL 2010. [DOI: 10.1007/s13213-010-0118-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]  Open
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Roma-Rodrigues C, Santos PM, Benndorf D, Rapp E, Sá-Correia I. Response of Pseudomonas putida KT2440 to phenol at the level of membrane proteome. J Proteomics 2010;73:1461-78. [DOI: 10.1016/j.jprot.2010.02.003] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2009] [Revised: 02/04/2010] [Accepted: 02/05/2010] [Indexed: 12/11/2022]
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Evolution of the RpoS regulon: origin of RpoS and the conservation of RpoS-dependent regulation in bacteria. J Mol Evol 2010;70:557-71. [PMID: 20506020 DOI: 10.1007/s00239-010-9352-0] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2010] [Accepted: 05/03/2010] [Indexed: 10/19/2022]
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Identification of functionally diverse lipocalin proteins from sequence information using support vector machine. Amino Acids 2010;39:777-83. [PMID: 20186553 DOI: 10.1007/s00726-010-0520-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2009] [Accepted: 02/06/2010] [Indexed: 10/19/2022]
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Schluchter WM, Shen G, Alvey RM, Biswas A, Saunée NA, Williams SR, Mille CA, Bryant DA. Phycobiliprotein biosynthesis in cyanobacteria: structure and function of enzymes involved in post-translational modification. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2010;675:211-28. [PMID: 20532743 DOI: 10.1007/978-1-4419-1528-3_12] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Breustedt DA, Chatwell L, Skerra A. A new crystal form of human tear lipocalin reveals high flexibility in the loop region and induced fit in the ligand cavity. ACTA CRYSTALLOGRAPHICA SECTION D: BIOLOGICAL CRYSTALLOGRAPHY 2009;65:1118-25. [PMID: 19770509 DOI: 10.1107/s0907444909031011] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2009] [Accepted: 08/04/2009] [Indexed: 11/11/2022]
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Grondin M, Hamel F, Averill-Bates DA, Sarhan F. Wheat proteins enhance stability and function of adhesion molecules in cryopreserved hepatocytes. Cell Transplant 2009;18:79-88. [PMID: 19476211 DOI: 10.3727/096368909788237104] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]  Open
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Guidot A, Elbaz M, Carrère S, Siri MI, Pianzzola MJ, Prior P, Boucher C. Specific genes from the potato brown rot strains of Ralstonia solanacearum and their potential use for strain detection. PHYTOPATHOLOGY 2009;99:1105-12. [PMID: 19671014 DOI: 10.1094/phyto-99-9-1105] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
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Chi WT, Fung RWM, Liu HC, Hsu CC, Charng YY. Temperature-induced lipocalin is required for basal and acquired thermotolerance in Arabidopsis. PLANT, CELL & ENVIRONMENT 2009;32:917-27. [PMID: 19302169 DOI: 10.1111/j.1365-3040.2009.01972.x] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
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Jobichen C, Fernandis AZ, Velazquez-Campoy A, Leung KY, Mok YK, Wenk MR, Sivaraman J. Identification and characterization of the lipid-binding property of GrlR, a locus of enterocyte effacement regulator. Biochem J 2009;420:191-9. [PMID: 19228114 PMCID: PMC3672471 DOI: 10.1042/bj20081588] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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