Fine chemical manipulations of microscopic liquid samples. 1. Droplet loading with chemicals

Temporal ratiometry to assess dynamic concentration distributions of fluorescent molecules in single live cells during continuous diffusional dosing

The introduction of specific molecules into live cells is a widely used approach to probe cellular mechanisms. Recently, we have reported on the sustained dosing of molecules into single cells via a microscopic diffusion port. Here we describe temporal ratiometry, a method to reconstruct intracellular concentration distribution of the delivered molecules as it varies in time during dosing. To characterize this method, we analyzed fluorescence intensity maps obtained during delivery of Lucifer Yellow CH, LY, a polar fluorophore into A7r5 vascular smooth muscle cells, normal rat kidney epithelial cells (NRKE), and MCF-7 human breast cancer cells. Temporal ratiometry indicates a linear increase in concentration of LY in these cells with a nearly uniform distribution during 20 min of delivery. The method cancels the effects of varying cell height and variable accessible volume on the measured intensities at different locations within the cell. Temporal ratiometry will be useful to estimate dynamic changes in intracellular concentration distributions and thus, facilitate the understanding of transport, binding, sequestration, and efflux of molecules introduced into cells.

Droplets for ultrasmall-volume analysis

By using methods that permit the generation and manipulation of ultrasmall-volume droplets, researchers are pushing the boundaries of ultrasensitive chemical analyses. (To listen to a podcast about this feature, please go to the Analytical Chemistry Web site at pubs.acs.org/ancham.).

Continuous and quantitative delivery of molecules into individual cells with a diffusional microburet

Direct delivery of molecules into the cytosol of live cells is required in many areas of biology and clinical research. Molecules of interest include indicator dyes, biomolecules, and pharmacological agents. In this work we describe continuous delivery of molecules into single cells using a diffusional microburet, DMB. The DMB is a pulled glass micropipette with a fine tip that contains a microscopic plug made of a hydrogel such as agar or polyacrylamide. This plug prevents flow but allows diffusive delivery of the molecule of interest from the DMB body into the cytosol, driven by its concentration gradient. This leads to a scheme of sustained intracellular dosing that is highly reproducible and quantifiable yet does not require the addition of solution volume to the cell. Potential loss of biomolecules from the cytosol through the plug of the DMB can be greatly reduced by proper choice of the pore size and tortuosity of the hydrogel in the DMB tip. The intracellular concentration of fluorescent molecules during delivery can be obtained calibration free. In this work we demonstrate dosing of Lucifer Yellow CH, LY, a charged fluorescent dye, into individual a7r5 vascular smooth muscle cells with a DMB. New types of quantitative analytical experiments on single live cells that the DMB technology enables are titration of intracellular ions and ligands, binding sites, and efflux pathways such as those that are involved in drug resistance.

Distinct and long-lived activity states of single enzyme molecules

Individual enzyme molecules have been observed to possess discrete and different turnover rates due to the presence of long-lived activity states. These stable activity states are thought to result from different molecular conformations or post-translational modifications. The distributions in kinetic activity observed in previous studies were obtained from small numbers of single enzyme molecules. Due to this limitation, it has not been possible to fully characterize the different kinetic and equilibrium binding parameters of single enzyme molecules. In this paper, we analyze hundreds of single beta-galactosidase molecules simultaneously; using a high-density array of 50,000 fL-reaction chambers, we confirm the presence of long-lived kinetic states within a population of enzyme molecules. Our analysis has isolated the source of kinetic variability to kcat. The results explain the kinetic variability within enzyme molecule populations and offer a deeper understanding of the unique properties of single enzyme molecules. Gaining a more fundamental understanding of how individual enzyme molecules work within a population should provide insight into how they affect downstream biochemical processes. If the results reported here can be generalized to other enzymes, then the stochastic nature of individual enzyme molecule kinetics should have a substantial impact on the overall metabolic activity within a cell.

Rate-Limiting Hydrodynamic Resistance for Controlled Reagent Delivery for Laboratory Solution Preparation

The need for precise delivery of minute quantities of substances for solution preparation and other applications is well-known in research, clinical, industrial, and environmental settings. Currently available techniques for solution preparation in the laboratory include traditional transfer pipettes, micropipettes based on air displacement, and motorized devices using some form of a piston system. These techniques control the amount delivered by controlling the delivered volume. In this work we test the practicality of the concept of using a constant rate-limiting hydrodynamic resistance to achieve controlled reagent flow for solution preparation. The delivered amount is determined in this approach by time, pressure, flow resistance, or a combination of these. Good results are achieved comparable to conventional techniques without the use of fine mechanical instrumentation. This approach holds promise as an alternative to current methods of solution preparation and reagent delivery for routine laboratory use.

Timing controllable electrofusion device for aqueous droplet-based microreactors

This paper describes an electrofusion device for controlling the precise moment of fusion between droplets by applying an electric field. This device allows (i) accurate determination of the start of chemical/biological reactions, (ii) minimum contact of reactants with channel walls--eliminating surface absorption problems, (iii) easy fabrication and (iv) continuous observation of initiated reaction. We demonstrated the fusion of beta-galactosidase and fluorescein di-beta-D-galactopyranoside (FDG) droplets, and observed the enzymatic reaction using fluorescence microscopy. In addition, sequential fusion of pico-litre droplets was also accomplished.

Digital concentration readout of single enzyme molecules using femtoliter arrays and Poisson statistics

Methods for accurately quantifying the concentration of a particular analyte in solution are all based on ensemble responses in which many analyte molecules give rise to the measured signal. In this paper, single molecules of beta-galactosidase were monitored using a 1 mm diameter fiber optic bundle with 2.4 x 10(5) individually sealed, femtoliter microwell reactors. By observation of the buildup of fluorescent products from single enzyme molecule catalysis over the array of reaction vessels and by application of a Poisson statistical analysis, a digital concentration readout was obtained. This approach should prove useful for single molecule enzymology and ultrasensitive bioassays. More generally, the ability to determine concentration by counting individual molecules offers a new approach to analysis of dilute solutions.

Microfabricated arrays of femtoliter chambers allow single molecule enzymology

Precise understanding of biological functions requires tools comparable in size to the basic components of life. Single molecule studies have revealed molecular behaviors usually hidden in the ensemble- and time-averaging of bulk experiments. Although most such approaches rely on sophisticated optical strategies to limit the detection volume, another attractive approach is to perform the assay inside very small containers. We have developed a silicone device presenting a large array of micrometer-sized cavities. We used it to tightly enclose volumes of solution, as low as femtoliters, over long periods of time. The microchip insures that the chambers are uniform and precisely positioned. We demonstrated the feasibility of our approach by measuring the activity of single molecules of beta-galactosidase and horseradish peroxidase. The approach should be of interest for many ultrasensitive bioassays at the single-molecule level.

Optical detection in microscopic domains. 3. Confocal analysis of fluorescent amphiphilic molecules

This series of papers demonstrates the feasibility of novel optical methodologies for microchemistry and analysis in aqueous samples of nano-, pico-, and femtoliter in volume. Not a conventional glass cuvette, but water-immiscible organic liquid, is used as the container for microscopic sample droplets in this approach. In part 1, absorption spectra of excellent quality were obtained and used for analysis from samples as small as a few tens of a micrometer in diameter. In part 2, an inert fluorescence marker as an internal standard was employed for indirectly detecting absorbing but nonfluorescent reagents in microsamples, employing inner filter effects. In this part 3, a third modality, confocal fluorescence microscopy, is added to the techniques being examined. A clearly visible emission ring emanating from an amphiphilic molecule, doxorubicin, at the sample boundary is demonstrated for the first time in "optically sliced" microdroplets. Relative intensity of this ring with respect to sample bulk can be used to study adsorption phenomena at liquid-liquid interfaces with proper calibrations for bulk and boundary. Quantitative separation of these two domains, a precondition to such calibrations, is also discussed.

On-Demand Mixing Droplet Spotter for Preparing Picoliter Droplets on Surfaces

An on-demand mixing droplet spotter for generating and mixing picoliter droplets has been developed for ultrasmall reaction vessels. The droplets were generated by applying a approximately 500-V, approximately 2-ms pulsed voltage to the tips of capillary tubes (o.d. approximately 20 microm; i.d. approximately 12 microm) filled with solution. The mixing process was achieved using electrostatic force. The initial droplet was formed by applying the pulsed voltage between one capillary and the substrate, and the second jet of the other solution was generated from the other capillary and collided with the initial droplet automatically because the electric field lines concentrated on the initial droplet. Using this mixing process, a microarray having a concentration gradient was obtained by spotting approximately 6-pL droplets on a surface with a density of one spot per 75 x 75 microm(2).

A microscopic, continuous, optical monitor for interstitial electrolytes and glucose

Ions, such as hydrogen (pH), sodium, or potassium, as well as metabolites, such as glucose or lactate, diffuse easily between blood in the capillaries and the interstitial fluid (ISF) residing between cells, and tissues. This work represents a synthesis of several unique concepts to achieve accurate, continuous, in vivo monitoring of critical ions and glucose in the ISF under the human skin. Ionic levels are monitored using optode technology that translates the respective concentrations into variable colors of ionophore/dye/polymeric liquid membranes. Glucose is monitored indirectly, by coupling through immobilized glucose oxidase with pH, that is then detected using a similar color scheme. The monitor consists of a tiny plastic bar ("sliver sensor"), 100-300 microns wide and 1-15 mm long, placed just under the skin, with optical spots or stripes for each analyte as well as blanks for calibration. The colors are read and translated into concentration values by a watchlike device placed above the skin. Direct optical coupling between the in vivo sensing bar and the ex vivo detector device requires negligible power, and eliminates the need for wires or optical fibers crossing the skin. The microminiature sliver penetrates the skin easily and painlessly, so that the user could insert it him- or herself. No risk of track infection exists. We are reporting here on the first successful in vitro tests of this approach.

Optical detection in microscopic domains. 2. Inner filter effects for monitoring nonfluorescent molecules with fluorescence

In this research, we test whether optical detection techniques show different characteristics in microscopic solution volumes (nano-, pico-, and femtoliter range) compared to the usual macroscopic samples. In part 1 (Lu, H.; et al. Anal Chem. 2000, 72, 1569-1576.) absorption spectra of high quality were obtained, quantitatively obeying both Beer-Lambert's law and the law of superposition, despite the micrometer optical path lengths and the curvatures of the droplets studied. Addition and subtraction of absorbing molecules with diffusional microburets (DMBs), as well as more complex operations (simultaneous addition of one and subtraction of another molecule, and a consuming scheme), have been monitored with good spectral and temporal resolution. Despite the unexpectedly good performance of absorption microspectrometry, fluorescence-based detection schemes are considered more sensitive for microscopic studies (e.g., cell physiology). In this paper, we test whether fluorescence-based schemes can be used to indirectly measure nonfluorescent chemicals in microscopic domains. Absorption by such molecules will cause a corresponding decrease in overall fluorescence intensity of the added standard fluorescent dye. This phenomenon, the inner filter effect (IFE), was tested using Lucifer Yellow CH (LY) as the fluorescent standard dye. Its effective irradiation was absorbed by Orange G (primary IFE) or its emission by Bromophenol Blue (secondary IFE). By utilizing these phenomena, (1) we measured the concentration of absorbing molecules in microscopic samples by adding a standard amount of LY by a DMB, and (2) we monitored DMB delivery of nonfluorescent reagents into droplets preloaded with LY. The results prove that IFEs are sensitive indirect means of detection of absorbing molecules in microscopic domains. The techniques presented are expected to find applications in cellular studies where absorption spectrometry is usually not considered.

A glass capillary ultramicroelectrode with an electrokinetic sampling ability

A glass capillary ultramicroelectrode (tip diameter approximately 1.2 microm) having an electrokinetic sampling ability is described. It is composed of a pulled glass capillary filled with an inner solution and three internal electrodes (Pt working and counter electrodes and an Ag/AgCl reference electrode). The voltammetric response of the capillary electrode is based on electrokinetic transport of analyte ions from the sample solution into the inner solution across the conical tip. It was found that the electrophoretic migration of analytes at the conical tip is faster than electroosmotic flow, enabling electrokinetic transport of analyte ions into the inner solution of the electrode. By using [Fe(CN)6]4- and (ferrocenylmethyl)trimethylammonium (FcTMA+) ions as model analytes, differential pulse voltammetric responses of the capillary electrode were investigated in terms of tip diameter of the capillary, sampling voltage, sampling time, detection limit and selectivity. The magnitude of the response depends on the size and charge of analyte ions. With a capillary electrode having a approximately 1.2-microm tip diameter, which minimizes non-selective diffusional entry of analytes, the response after 1 h sampling at +1.7 V is linearly related to [Fe(CN)6]4- concentration in the range of 0.50-5.0 mM with the detection limit of 30 microM. Application of a potential of the same sign as that of the analyte ion forces the analyte to move out from the electrode to the solution, enabling reuse of the same capillary electrode. The charge-selective detection of analytes with the capillary electrode is demonstrated for [Fe(CN)6]4- in the presence of FcTMA+.

Optical detection in microscopic domains. 1. Monitoring chemical manipulations with absorption microspectrometry

In this research, we test whether optical detection techniques, such as absorption microspectrometry, fluorescence detection, and inner filter effects, show different characteristics in microscopic domains (nano-, pico- and femtoliter range) with respect to usual solution volumes. In this part 1, characterization of absorption microspectrometry is facilitated by the use of a novel microscopic tool, the diffusional microburet (DMB), suitable for fine chemical manipulations of microscopic liquid samples. Since diffusional delivery of substances will not induce appreciable changes in volume and shape of the sample, a DMB makes it possible to obtain spectral recordings and a reference spectrum from the same microscopic droplet. Thus, good quantitative spectra of microscopic domains can be assessed. With this approach, despite the curvature of the sample boundaries, the large surface-to-volume ratios, and microscopic optical path lengths, both Beer-Lambert's law and the law of superposition were found to be directly applicable in microscopic domains without any corrections for absorption at sample boundaries. Use of a combination of microspectrometry and chemical manipulations by DMBs made it possible for the first time to record in real time, in truly microscopic domains, spectral evolution upon addition or subtraction of chemicals, as well as monitor the progress of chemical reactions. This approach is expected to contribute to the optical exploration of microchemistry and microanalysis.

Fine chemical manipulations of microscopic liquid samples. 2. Consuming and nonconsuming schemes

Microscopic liquid particles can be manipulated chemically using a suitable diffusional microburet (DMB), whose tiny tip plugged with a diffusion membrane acts as a well-defined diffusional transfer channel. In part 1 of this work (Gratzl et al. Anal. Chem. 1999, 71, 2751-2756), we discussed the simplest DMB-based operation: addition, i.e., loading a droplet with a chemical that accumulates there without any chemical reaction occurring. Since in this process no consumption of the delivered molecules in the target droplet takes place, addition is a nonconsuming scheme. In this work, another type of nonconsuming scheme is explored, which is the subtraction of a substance from droplets via a DMB. This process has no analogy among macroscopic chemical operations. Both addition and subtraction occur according to an exponential asymptotic process when diffusion is at quasisteady state inside the DMB tip. These nonconsuming operations were characterized using the transport of microscopic quantities of Lucifer Yellow CH, a fluorescent dye, under a fluorescent microscope. The third basic type of chemical manipulation is when the substance delivered by a DMB is consumed in the target droplet instantaneously by a fast chemical reaction. This consuming scheme was studied by delivering EDTA into droplets containing Pb2+ ions and a color indicator. These microscopic titrations were monitored using gray scale transmittance images of the droplets as recorded versus time. A unified theory of the three basic DMB operations is also presented.