Microbial Internal Storage Alters the Carbon Transformation in Dynamic Anaerobic Fermentation

Metabolic modelling of anaerobic amino acid uptake and storage by fermentative polyphosphate accumulating organisms

Existing enhanced biological phosphorus removal (EBPR) models do not fully describe the metabolism of fermentative polyphosphate accumulating organisms (fPAOs), particularly under mixed substrate conditions representative of fermentation-enhanced EBPR (F-EBPR) processes. This study presents a steady-state metabolic model integrating anaerobic amino acid (AA) fermentation and storage processes in fPAOs. The model identifies key metabolic interactions underlying fPAO metabolism, prioritising substrate accumulation over fermentation. This results in significant changes to ATP and reduction-oxidation (redox) flows as compared to when relying on previous AA fermentation models typically used to describe fPAO metabolism, with medium-chain-length (MCL) polyhydroxyalkanoate (PHA) formation and polyphosphate (polyP) consumption acting as important electron and energy management mechanisms, respectively. Succinate, rather than volatile fatty acids (VFAs), was identified as the more likely synergetic substrate between fermentative and conventional PAOs (cPAOs) under these conditions. Moreover, conditions favourable of VFA efflux by fPAOs may also favour a shift away from a polyP accumulation to a fermentation dominant metabolism. Further work is required to verify the role of MCL-PHA fractions, alongside the contribution of free intracellular AA accumulation as compared to polymers such as cyanophycin or polyglutamate on fPAO metabolism. This metabolic model provides a framework for better understanding the role of fPAOs and their interactions with cPAOs within EBPR processes, informing future modelling and optimisation of F-EBPR systems.

13C-Labelled Glucose Reveals Shifts in Fermentation Pathway During Cathodic Electro-Fermentation with Mixed Microbial Culture

Cathodic Electro-Fermentation (CEF) is an innovative approach to manage the spectrum of products deriving from anaerobic fermentation. Herein, mixed microbial culture fermentation using a ternary mixture containing labelled 13C glucose and non-labelled acetate and ethanol was studied to identify the role of polarization on the metabolic pathways of glucose fermentation. CEF at an applied potential of -700 mV (vs. SHE, Standard Hydrogen Electrode) enhanced the production yield of acetate, propionate, and butyrate (0.90±0.10, 0.22±0.03, and 0.34±0.05 mol/mol; respectively) compared to control tests performed at open circuit potential (OCP) (0.54±0.09, 0.15±0.04, and 0.20±0.001 mol/mol, respectively). Results indicate that CEF affected the 13C labelled fermented product levels and their fractional 13C enrichments, allowing to establish metabolic pathway models. This work demonstrates that, under cathodic polarization, the abundance of both fully 13C labelled propionate and butyrate isotopomers increased compared to control tests. The effect of CEF is mainly due to intermediates initially produced from the glucose metabolic transformation in the presence of non-labelled acetate and ethanol as external substrates. These findings represent a significant advancement in current knowledge of CEF, which offers a promising tool to control mixed cultures bioprocesses.

Neglected role of iron redox cycle in direct interspecies electron transfer in anaerobic methanogenesis: Inspired from biogeochemical processes

Anaerobic digestion is an indispensable technical option towards green and low-carbon wastewater treatment, with interspecies electron transfer (IET) playing a key role in its efficiency and operational stability. The exogenous semiconductive iron oxides have been proven to effectively enhance IET, while the cognition of the physicochemical-biochemical coupling stimulatory mechanism was circumscribed and remains to be elucidated. In this study, semiconductive iron oxides, α-Fe2O3, γ-Fe2O3, α-FeOOH, and γ-FeOOH were found to significantly enhance syntrophic methanogenesis by 76.39, 72.40, 37.33, and 32.64% through redirecting the dominant IET pathway from classical interspecies hydrogen transfer to robust direct interspecies electron transfer (DIET). Their alternative roles as electron shuttles potentially substituting for c-type cytochromes were conjectured to establish an electron transport matrix associated with conductive pili. Distinguished from the conventional electron conductor mechanism of conductive Fe3O4, semiconductive iron oxides facilitated DIET intrinsically through the capacitive Fe(III/II) redox cycles coupled with secondary mineralization. The growth of Aminobacterium, Sedimentibacter, and Methanothrix was enriched and the gene copy numbers of Geobacteraceae 16S ribosomal ribonucleic acid were selectively flourished by 2.0-∼4.5- fold to establish a favorable microflora for DIET pathway. Metabolic pathways of syntrophic acetogenesis from propionate/butyrate and CO2 reduction methanogenesis were correspondingly promoted. The above findings provide new insights into the underlying mechanism of iron minerals enhancing the DIET-oriented pathway and offer paradigms for redox-mediated energy harvesting biological wastewater treatment.

Electrical stress and acid orange 7 synergistically clear the blockage of electron flow in the methanogenesis of low-strength wastewater

Energy recovery from low-strength wastewater through anaerobic methanogenesis is constrained by limited substrate availability. The development of efficient methanogenic communities is critical but challenging. Here we develop a strategy to acclimate methanogenic communities using conductive carrier (CC), electrical stress (ES), and Acid Orange 7 (AO7) in a modified biofilter. The synergistic integration of CC, ES, and AO7 precipitated a remarkable 72-fold surge in methane production rate compared to the baseline. This increase was attributed to an altered methanogenic community function, independent of the continuous presence of AO7 and ES. AO7 acted as an external electron acceptor, accelerating acetogenesis from fermentation intermediates, restructuring the bacterial community, and enriching electroactive bacteria (EAB). Meanwhile, CC and ES orchestrated the assembly of the archaeal community and promoted electrotrophic methanogens, enhancing acetotrophic methanogenesis electron flow via a mechanism distinct from direct electrochemical interactions. The collective application of CC, ES, and AO7 effectively mitigated electron flow impediments in low-strength wastewater methanogenesis, achieving an additional 34% electron recovery from the substrate. This study proposes a new method of amending anaerobic digestion systems with conductive materials to advance wastewater treatment, sustainability, and energy self-sufficiency.

Glycerol conversion by aerobic granular sludge

Glycerol is abundantly present in wastewater from industries such as biodiesel production facilities. Glycerol is also a potential carbon source for microbes that are involved in wastewater nutrient removal processes. The conversion of glycerol in biological phosphorus removal of aerobic granular sludge processes has not been explored to date. The current study describes glycerol utilization by aerobic granular sludge and enhanced biological phosphorus removal (EBPR). Robust granules with good phosphorus removal capabilities were formed in an aerobic granular sludge sequencing batch reactor fed with glycerol. The interaction between the fermentative conversion of glycerol and product uptake by polyphosphate accumulating organisms (PAO) was studied using stoichiometric and microbial community analysis. Metagenomic, metaproteomic and microscopic analysis identified a community dominated by Actinobacteria (Tessaracoccus and Micropruina) and a typical PAO known as Ca. Accumulibacter. Glycerol uptake facilitator (glpF) and glycerol kinase (glpK), two proteins involved in the transport of glycerol into the cellular metabolism, were only observed in the genome of the Actinobacteria. The anaerobic conversion appeared to be a combination of a substrate fermentation and product uptake-type reaction. Initially, glycerol fermentation led mainly to the production of 1,3-propanediol (1,3-PDO) which was not taken up under anaerobic conditions. Despite the aerobic conversion of 1,3-PDO stable granulation was observed. Over time, 1,3-PDO production decreased and complete anaerobic COD uptake was observed. The results demonstrate that glycerol-containing wastewater can effectively be treated by the aerobic granular sludge process and that fermentative and polyphosphate accumulating organisms can form a food chain in glycerol-based EBPR processes.

Effect of Pretreatment by Freeze Vacuum Drying on Solid-State Anaerobic Digestion of Corn Straw

As a common agricultural waste, corn straw (CS) has a refractory structure, which is not conducive to anaerobic digestion (AD). Appropriate pretreatment is crucial for addressing this problem. Thus, freeze vacuum drying (FVD) was proposed. In this study, fresh CS (F-CS) pretreated (5 h, −40 °C) by FVD and naturally dried CS (D-CS) were compared. Differences in substrate surface structure and nutrient composition were first investigated. Results show that a loose and porous structure, crystallinity, and broken chemical bonds, as well as higher proportions of VS, C, N, cellulose, hemicellulose, and crude proteins in F-CS show a potential for methane production. Besides, process performance and stability were also examined in both high (4, VS basis) and low (1, VS basis) S/I ratio AD. A higher degradation ratio of hemicellulose as well as richer dissolved microbial metabolites, coenzymes, tyrosine-like proteins, and hydrolysis rate of particulate organic matter in the F-CS system enhanced the efficiency of methane conversion. The cumulative methane yield increased from 169.66 (D-CS) to 209.97 (F-CS) mL/gVS in the high S/I ratio system (p = 0.02 < 0.05), and 156.97 to 171.89 mL/gVS in the low S/I ratio system. Additionally, 16S-rRNA-gene-based analysis was performed. Interestingly, the coordination of key bacteria (Clostridium_sensu_stricto_1, Bacillus, Terrisporobacter. Clostridium_sensu_stricto_7, Thermoclostrium, UCG-012, and HN-HF0106) was more active. Poorer Methanosarcina and Methanomassiliicoccus as well as richer Methanobrevibacter and Methanoculleus stimulated the co-relationship of key archaea with diverse methanogenesis pathways. This study aims to verify the positive effect of FVD pretreatment on AD of CS, so as to provide a reference for applications in waste management.

Methane production from acetate, formate and H2/CO2 under high ammonia level: Modified ADM1 simulation and microbial characterization

This study evaluated the methanogenic performance of typical substrates (acetate, formate, H₂/CO₂, and glucose) under low and high ammonia levels and the Anaerobic Digestion Model No.1 (ADM1) was extended and modified for better simulation and understanding of the process. Formate-utilizing and hydrogen-utilizing methanogenesis showed stronger ammonia resistance than acetate-utilizing methanogenesis (13-23% vs. 34% decrease in methane production (MP)). Model extension, based on foundational experiments fed with three typical precursors (R² > 0.92), was then validated with glucose degradation experiments, and satisfactory predictions of MP and total volatile fatty acids were obtained (R² > 0.91). Based on the modified ADM1, the carbon fluxes of glucose degradation were determined, and formate-utilizing methanogenesis showed its importance with a 28-34% contribution of the total methanation, becoming the dominant pathway under high ammonia level. Formate-utilizing methanogenesis also had a thermodynamic advantage among the three pathways. 16S rRNA sequencing suggested a homology between the hydrogen-utilizing and formate-utilizing methanogens. Methanobacterium and Methanobrevibacter were found to be key methanogens, and their enrichment under high ammonia level confirmed the stronger ammonia tolerance of formate-utilizing and hydrogen-utilizing methanogenesis. The microbial characterization and modified ADM1 simulations supported each other.

Recognition of core microbial communities contributing to complex organic components degradation during dry anaerobic digestion of chicken manure

Microbial metabolism of complex organic components can drive different microbial communities, which is significant to the process of dry anaerobic digestion (AD). However, possible mechanisms between organic components and the corresponding microbial communities during the process of dry AD is poorly investigated. Results showed that the microbial species affecting the degradation of organic components were 69 nodes (13.3%) in the hydrolysis stage, hemicellulose was mainly degraded by Methanobacterium (2.3%), with a degradation rate of 35.0%. In the acetogenesis stage, the microbial species were 27 nodes (10.3%), hemicellulose was mainly degraded by LK-44f (0.1%) and Treponema (0.3%), with a degradation rate of 52.2%. In the methanogenesis stage, the microbial species were 10 nodes (4.8%), polysaccharide was mainly degraded by Ureibacillus (0.1%), with a degradation rate of 46.9%. The study provides theoretical support for the rapid degradation of complex components by segment-oriented regulation.

Comparison of Carbon Dioxide with Anaerobic Digester Biogas as a Methanogenic Biocathode Feedstock

BES biogas upgrading studies have typically used bicarbonate or commercial gas mixtures as a biocathode substrate instead of anaerobic digester biogas. Therefore, the objective of this study was to (i) compare the performance of a methanogenic BES between CO₂-fed and biogas-fed cycles; (ii) investigate possible factors that may account for observed performance differences; and (iii) assess the performance of a biogas-fed biocathode at various applied cathode potentials. The maximum 1-d CH₄ production rate in a biogas-fed biocathode (3003 mmol/m²-d) was 350% higher than in a CO₂-fed biocathode (666 mmol/m²-d), and the biogas-fed biocathode was capable of maintaining high performance despite a variable biogas feed composition. Anode oxidation of reduced gases (e.g., CH₄ and H₂S) from biogas may theoretically contribute 4% to 35% of the total charge transfer from anode to cathode at applied cathode potentials of -0.80 to -0.55 V (vs SHE). The introduction of biogas did not significantly change the biocathode archaeal community (dominated by a Methanobrevibacter sp. phylotype), but the bacterial community shifted away from Bacteroidetes and toward Proteobacteria, which may have contributed to the improved performance of the biogas-fed system. This study shows that anaerobic digester biogas is a promising biocathode feedstock for BES biogas upgrading.

Biological Waste Management in the Case of a Pandemic Emergency and Other Natural Disasters. Determination of Bioenergy Production from Floricultural Waste and Modeling of Methane Production Using Deep Neural Modeling Methods

In relation to the situation caused by the pandemic, which may also take place in the future, there is a need to find effective solutions to improve the economic situation of the floristry industry. The production and sale of flowers is time-consuming and long-term. Therefore, any information that causes the impossibility of selling the plants will result in a reduction of profitability or bankruptcy of such companies. Research on rationally utilizing biowaste from plant cultivation as well as unsold flowers for environmental protection and effective use of their potential as a raw material for bioenergy production were examined in this article. The aim of this study was to analyze the energetic potential of the biodegradable fraction of waste from floriculture. The trials included floricultural waste containing the stems, leaves and flowers of different species and hybrid tulips (Tulipa L.), roses (Rosa L.), sunflowers (Helianthus L.) and chrysanthemums (Dendranthema Des Moul.). Their biogas and methane production as well as heat of combustion were determined experimentally. The calorific value was calculated on the basis of results from selected floricultural waste and its chemical composition. The biogas production was tested on different levels of plant material fragmentation (chaff, macerate) in fermentation processes with two ranges of temperature (meso- and thermophilic fermentation). The presented results show that the highest calorific values were determined for dry stems of roses (18,520 kJ/kg) and sunflowers (18,030 kJ/kg). In turn, the lowest were obtained for dried chrysanthemums and tulips, for which the heating value reached 15,560 kJ/kg and 15,210 kJ/kg. In addition, based on one ton of the fresh mass of biowaste from floriculture, the largest biogas production including the control was obtained from the chrysanthemum chaff by mesophilic anaerobic digestion. Moreover, the largest volume of methane was received by thermophilic anaerobic digestion of roses. The highest content of biomethane (56.68%) was reached by thermophilic fermentation of roses. The energy production of the analyzed substrates was also calculated, based on the amount of biogas produced in the containers for anaerobic digestion. Additionally, a deep neural network model, which predicted the production of methane gas, was created. Owing to the properties of the network, the level of significance of variables used for modelling and prediction of biogas production was determined. The neural modelling process was carried out with the use of the H2O program.

Modeling the formation of microorganism-derived dissolved organic nitrogen (mDON) in the activated sludge system

Microorganism-derived dissolved organic nitrogen (mDON) represents a significant and inevitable portion of dissolved organic nitrogen (DON) in the wastewater biotreatment processes. In the existing method, mDON concentrations are indirectly measured by the values of DON concentrations from the reactors with DON-free influent. However, this becomes problematic when influent contains DON. Especially when the real wastewater is involved, the paucity of the direct methods to quantitatively measure mDON is a major barrier to further research. This limitation is due to the difficulty of segregating mDON from the other nitrogenous organics, e.g., influent DON. In this study, we propose the ASM-mDON model based on ASM #1, which incorporates the production and consumption of mDON in the activated sludge processes to predict the mDON concentrations. In four independent lab-scale tests, our model was established and calibrated to obtain the accurate values of mDON (R² = 0.929, p < 0.05), and the validity and applicability of the model were successfully examined by comparing the simulated and measured data. Moreover, the universality of the ASM-mDON model was further confirmed by simulating mDON production in a full-scale wastewater treatment plant. A reasonable prediction of mDON formation was shown in a full-scale test (1.98 ± 0.71 mg/L in June and 1.51 ± 0.54 mg/L in July) and is indirectly supported by an algal bioassay (p < 0.05, t-test). This study provides a useful approach to the efficient and accurate evaluation of mDON formation, which will improve current strategies designed to minimize the effluent mDON in wastewater bioprocesses.

The biogas production potential from silkworm waste

In view of the increasing demand of organic agriculture, utilization of waste and environmental protection, sericulture focuses not only on the cocoon production, but also on other ways that can benefit the farm's economy. It is necessary to find new sources of income for small-scale farmers not only through cocoon selling, but also by the multiple uses of by-products. Insect farming technology provides a cheap source of biomass, which may be a good material in biogas production. Studies showed that the examined substrates, both silkworm breeding waste and caterpillar excreta, generate a biogas yield comparable to other substrates of agricultural origin, such as cattle, pig and chicken manures. Fermentation of silkworm excreta under mesophilic conditions produces 167.32 m³/Mg TS of methane and 331.97 m³/Mg TS of biogas, while fermentation of silkworm breeding waste yields 256.59 m³/Mg TS of methane and 489.24 m³/Mg TS of biogas. Moreover, the chemical composition of these raw materials was analyzed.

Modeling of acetate-type fermentation of sugar-containing wastewater under acidic pH conditions

In this study, a kinetic model was developed based on Anaerobic Digestion Model No. 1 to provide insights into the directed production of acetate and methane from sugar-containing wastewater under low pH conditions. The model sufficiently described the dynamics of liquid-phase and gaseous products in an anaerobic membrane bioreactor by comprehensively considering the syntrophic bioconversion steps of sucrose hydrolysis, acidogenesis, acetogenesis and methanogenesis under acidic pH conditions. The modeling results revealed a significant pH-dependency of hydrogenotrophic methanogenesis and ethanol-producing processes that govern the sucrose fermentative pathway through changing the hydrogen yield. The reaction thermodynamics of such acetate-type fermentation were evaluated, and the implications for process optimization by adjusting the hydraulic retention time were discussed. This work sheds light on the acid-stimulated acetate-type fermentation process and may lay a foundation for optimization of resource-oriented processes for treatment of food wastewater.

Approach of describing dynamic production of volatile fatty acids from sludge alkaline fermentation

In this work, a mathematical model was developed to describe the dynamics of fermentation products in sludge alkaline fermentation systems for the first time. In this model, the impacts of alkaline fermentation on sludge disintegration, hydrolysis, acidogenesis, acetogenesis, and methanogenesis processes are specifically considered for describing the high-level formation of fermentation products. The model proposed successfully reproduced the experimental data obtained from five independent sludge alkaline fermentation studies. The modeling results showed that alkaline fermentation largely facilitated the disintegration, acidogenesis, and acetogenesis processes and severely inhibited methanogenesis process. With the pH increase from 7.0 to 10.0, the disintegration, acidogenesis, and acetogenesis processes respectively increased by 53%, 1030%, and 30% while methane production decreased by 3800%. However, no substantial effect on hydrolysis process was found. The model also indicated that the pathway of acetoclastic methanogenesis was more severely inhibited by alkaline condition than that of hydrogentrophic methanogenesis.

A modeling approach to direct interspecies electron transfer process in anaerobic transformation of ethanol to methane

Recent studies have shown that direct interspecies electron transfer (DIET) plays an important part in contributing to methane production from anaerobic digestion. However, so far anaerobic digestion models that have been proposed only consider two pathways for methane production, namely, acetoclastic methanogenesis and hydrogenotrophic methanogenesis, via indirect interspecies hydrogen transfer, which lacks an effective way for incorporating DIET into this paradigm. In this work, a new mathematical model is specifically developed to describe DIET process in anaerobic digestion through introducing extracellular electron transfer as a new pathway for methane production, taking anaerobic transformation of ethanol to methane as an example. The developed model was able to successfully predict experimental data on methane dynamics under different experimental conditions, supporting the validity of the developed model. Modeling predictions clearly demonstrated that DIET plays an important role in contributing to overall methane production (up to 33 %) and conductive material (i.e., carbon cloth) addition would significantly promote DIET through increasing ethanol conversion rate and methane production rate. The model developed in this work will potentially enhance our current understanding on syntrophic metabolism via DIET.

Evaluation of gas and carbon transport in a methanogenic bioelectrochemical system (BES)

Bioelectrochemical systems (BESs) may be used to upgrade anaerobic digester biogas by directly converting CO₂ to CH₄ . The objective of this study was to evaluate gas (N₂ , CO₂ , CH₄ , and H₂ ) and carbon transport within a methanogenic BES. Four BES configurations were evaluated: abiotic anode with abiotic cathode (AAn-ACa), bioanode with abiotic cathode (BAn-ACa), abiotic anode with biocathode (AAn-BCa), and bioanode with biocathode (BAn-BCa). Transport of N₂ , a gas commonly used for flushing anoxic systems, out of the anode headspace ranged from 3.7 to 6.2 L/d-atm-m² , normalized to the proton exchange membrane (PEM) surface area and net driving pressure (NDP). CO₂ was transported from the cathode to the anode headspace at rates from 3.7 to 5.4 L/d-atm-m² . The flux of H₂ from cathode to anode headspace was 48% greater when the system had a biocathode (AAn-BCa) than when H₂ was produced at an abiotic cathode (BAn-ACa), even though the abiotic cathode headspace had 75% more H₂ than the AAn-BCa biocathode at the end of 1 day. A 7-day carbon balance of a batch-fed BAn-BCa BES showed transient microbial carbon storage and a net transport of carbon from anode to cathode. After a 7-day batch incubation, the CH₄ production in the biocathode was 27% greater on a molar basis than the initial CO₂ supplied to the biocathode headspace, indicating conversion of CO₂ produced in the anode. This research expands the current understanding of methanogenic BES operation, which may be used in improving the assessment of BES performance and/or in the development of alternative BES designs and mathematical models. Biotechnol. Bioeng. 2017;114: 961-969. © 2016 Wiley Periodicals, Inc.