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Ragab SM, Aboelnga MM, Moawed EA, El Sadda RR, Khairy GM. Enhanced glutathione sensing in clinical samples with Bovine Serum Albumin-stabilized copper nanoclusters: A novel fluorescent probe. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2025; 328:125465. [PMID: 39603087 DOI: 10.1016/j.saa.2024.125465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2024] [Revised: 11/09/2024] [Accepted: 11/19/2024] [Indexed: 11/29/2024]
Abstract
Glutathione (GSH) is a critical biomolecule involved in maintaining protecting against both oxidative stress and cellular redox homeostasis, making its accurate detection essential for clinical diagnostics. This study introduces a novel, highly sensitive, and selective fluorescence-based method for detecting GSH in human serum samples, using copper nanoclusters stabilised with Bovine Serum Albumin (BSA-CuNCs) as a probe. The BSA-CuNCs display a distinct fluorescence emission peak at 402 nm when excited at 326 nm, demonstrating exceptional photostability and structural integrity. The interaction with GSH not only significantly enhances the fluorescence intensity but also induces a red shift in the emission peak, attributed to the chemisorption of GSH onto the BSA-CuNCs surface, as confirmed by IR, TEM, and EDS analyses. This method achieves a broad linear detection range spanning from 2.95 to 207 µM and a highly sensitive detection limit of 79 nM, outperforming many existing detection techniques with respect to both selectivity and sensitivity. The BSA-CuNCs probe has been effectively used to measure the amount of GSH in human serum, with recovery values between 95.07 % and 101.38 %. Furthermore, the experimental results have been confirmed by density functional theory (DFT) calculations and molecular docking, yielding a full comprehension of the interaction mechanisms at the molecular scale. The novelty of this approach lies in its combination of high selectivity, sensitivity, and biocompatibility, making it a valuable tool for the early monitoring and diagnosis of diseases related to oxidative stress, such as cancer and neurodegenerative disorders. The method's simplicity, cost-effectiveness, and potential for adaptation to other biological targets underscore its significance.
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Affiliation(s)
- Sara M Ragab
- Chemistry Department, Faculty of Science, Damietta University, 34511 Damietta, Egypt
| | - Mohamed M Aboelnga
- Chemistry Department, Faculty of Science, Damietta University, 34511 Damietta, Egypt; King Salman International University, Faculty of Science, Ras Sudr, 46612, Sinai, Egypt.
| | - Elhossein A Moawed
- Chemistry Department, Faculty of Science, Damietta University, 34511 Damietta, Egypt
| | - Rana R El Sadda
- Chemistry Department, Faculty of Science, Damietta University, 34511 Damietta, Egypt
| | - Gasser M Khairy
- Chemistry Department, Faculty of Science, Suez Canal University, 41522 Ismailia, Egypt.
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2
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Wulf J, Lewit N, Akter S, K Bwambok D, Anum D, Alonge T, Kuedukey C, Bolton B, Dassow B, Halim MA, O Fakayode S. Evaluating binding and interaction of selected pesticides with serum albumin proteins by Raman, 1H NMR, mass spectrometry and molecular dynamics simulation. J Biomol Struct Dyn 2025; 43:2571-2584. [PMID: 38197596 DOI: 10.1080/07391102.2024.2302344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2023] [Accepted: 11/23/2023] [Indexed: 01/11/2024]
Abstract
Addressing the acute pesticide poisoning and toxicity to humans, is a global challenge of top priority. Serum albumin is the most abundant plasma protein, capable of binding with herbicide and pesticide residues. This study reports multifaceted approaches for in-depth and robust investigation of the molecular interactions of selected pesticides, including propanil (PPL), bromoxynil (BXL), metolachlor (MLR) and glyphosate (GPE) with bovine serum albumin (BSA) proteins using experimental (Raman and FTIR spectroscopy, native mass spectrometry and high field 1H NMR), molecular dynamics (MD) simulation and principal component analysis (PCA). The binding of pesticides with BSA resulted in BSA amide I and amide II Raman spectral shifts. PCA of Raman spectra of serum-pesticide complexes showed the grouping of pesticides on the score plot based on the similarities and differences in pesticides' chemical structures. Native mass spectrometry results revealed strong adduct formation of the pesticides with the protein. The observed changes in chemical shifts, peak broadening or peak disappearance of characteristic proton signals of the pesticides, indicated altered chemical environments due to binding BSA-pesticides interactions. The results of MD simulation conducted for over 500 ns revealed strong pesticides interaction with LEU197, LEU218, LEU237, TRP213, SER286 and ILE289 residues to the site I of BSA. Free energy landscapes provided insights into the conformational changes in BSA on the binding of pesticides. Overall, the experimental and computational results are in consonant and indicate the binding of pesticides into the site I and site II (sub-domain IIA) of the BSA via hydrogen bonding, non-covalent and hydrophobic interactions.
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Affiliation(s)
- Josefa Wulf
- Department of Chemistry and Biochemistry, Kennesaw State University, Kennesaw, GA, USA
| | - Noam Lewit
- Department of Chemistry and Biochemistry, Kennesaw State University, Kennesaw, GA, USA
| | - Shaila Akter
- Division of Quantum Chemistry, The Red-Green Research Centre, BICCB, Dhaka, Bangladesh
| | - David K Bwambok
- Department of Chemistry, Ball State University, Muncie, IN, USA
| | - Davis Anum
- Department of Chemistry, Ball State University, Muncie, IN, USA
| | - Temitope Alonge
- Department of Chemistry, Ball State University, Muncie, IN, USA
| | | | - Brinkley Bolton
- Department of Chemistry, Physics & Astronomy, Georgia College & State University, Milledgeville, GA, USA
| | - Bailey Dassow
- Department of Chemistry, Physics & Astronomy, Georgia College & State University, Milledgeville, GA, USA
| | - Mohammad A Halim
- Department of Chemistry and Biochemistry, Kennesaw State University, Kennesaw, GA, USA
| | - Sayo O Fakayode
- Department of Chemistry, Physics & Astronomy, Georgia College & State University, Milledgeville, GA, USA
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3
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Chaves OA, Cesarin-Sobrinho D, Serpa C, da Silva MB, de Lima MEF, Netto-Ferreira JC. The presence of NSAIDs may affect the binding capacity of serum albumin to the natural products hymecromone and umbelliferone. Int J Biol Macromol 2024; 283:137981. [PMID: 39581404 DOI: 10.1016/j.ijbiomac.2024.137981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2024] [Revised: 11/02/2024] [Accepted: 11/21/2024] [Indexed: 11/26/2024]
Abstract
The natural products 7-hydroxycoumarin (7HC) and 7-hydroxy-4-methylcoumarin (7H4MC), known as umbelliferone and hymecromone, respectively, are one of the simplest structural examples from coumarin's family, showing several biological activities. Bovine serum albumin (BSA) is the main model protein used in laboratory experiments to characterize the biophysical capacity of potential drugs to be carried until the target in the bloodstream. Thus, the interaction BSA:7HC and BSA:7H4MC was biophysically characterized by circular dichroism (CD), steady-state, and time-resolved fluorescence techniques combined with molecular docking calculations via cross-docking approach to better correlate with the biological medium. There is a ground-state association BSA:7HC/7H4MC, and the presence of the methyl group in the coumarin core did not change the binding affinity and trend to BSA significantly. However, comparing the obtained data with those reported to benzo-α-pyrone there is evidence that the incorporation of the hydroxyl group in the aromatic ring A of the coumarin core improves the binding affinity to albumin around 10-folds and changes the binding site from subdomain IIA to IIIA or IB. In addition, the presence of other drugs, e.g., naproxen or ketoprofen, might interfere with the binding capacity of 7HC and 7H4MC, resulting in perturbations on the residence time of some clinically used drugs in the bloodstream.
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Affiliation(s)
- Otávio Augusto Chaves
- Department of Chemistry, Coimbra Chemistry Centre-Institute of Molecular Sciences (CQC-IMS), University of Coimbra (UC), Rua Larga, 3004-535 Coimbra, Portugal.
| | - Dari Cesarin-Sobrinho
- Departament of Organic Chemistry, Institute of Chemistry, Federal Rural University of Rio de Janeiro (UFRRJ), Seropédica 23890-000, RJ, Brazil
| | - Carlos Serpa
- Department of Chemistry, Coimbra Chemistry Centre-Institute of Molecular Sciences (CQC-IMS), University of Coimbra (UC), Rua Larga, 3004-535 Coimbra, Portugal
| | - Márcia Barbosa da Silva
- Department of Biochemistry and Biophysics, Institute of Health Sciences, Federal University of Bahia (UFBA), Salvador 40110-902, BA, Brazil
| | - Marco Edilson Freire de Lima
- Departament of Organic Chemistry, Institute of Chemistry, Federal Rural University of Rio de Janeiro (UFRRJ), Seropédica 23890-000, RJ, Brazil
| | - José Carlos Netto-Ferreira
- Departament of Organic Chemistry, Institute of Chemistry, Federal Rural University of Rio de Janeiro (UFRRJ), Seropédica 23890-000, RJ, Brazil.
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4
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Sa'adeh H, Maris A, Prince KC, Plekan O, Grazioli C, Coreno M, Richter R. Insights into the electronic structure of non-steroidal anti-inflammatory drugs: soft X-ray study of fenoprofen, ketoprofen and methyl salicylate in the gas phase. Phys Chem Chem Phys 2024; 26:29082-29094. [PMID: 39555791 DOI: 10.1039/d4cp03600j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2024]
Abstract
The valence and core electronic structure of three non-steroidal anti-inflammatory drugs (methyl salicylate, fenoprofen and ketoprofen) have been studied by photoelectron and soft X-ray absorption spectroscopy, supported by theoretical calculations of the molecular and electronic structure. The conformational landscape has been explored for sixteen low-energy conformers of fenoprofen and ketoprofen, and the energies of both compounds fall into two groups with steric similarities, separated by about 3 kJ mol-1. Valence band photoelectron spectra agree with previous results, and the spectra have been calculated using two approaches. We find the outer valence Green's function method gives good results, but the P3+ method is a little better, particularly for outer valence ionic states. Carbon and oxygen 1s photoemission spectra are reported and are in acceptable agreement with the theory. The C and O K near-edge X-ray absorption fine structure spectra are reported and interpreted by comparison with reference compounds. We analyse the data to provide rough estimates of the energies of the unoccupied orbitals in methyl salicylate.
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Affiliation(s)
- Hanan Sa'adeh
- Department of Physics, The University of Jordan, Amman, 11942, Jordan.
- Elettra Sincrotrone Trieste, in Area Science Park, 34149 Basovizza, Trieste, Italy
| | - Assimo Maris
- Dipartimento di Chimica G. Ciamician, Università di Bologna, 40139 Bologna, Italy.
| | - Kevin C Prince
- Elettra Sincrotrone Trieste, in Area Science Park, 34149 Basovizza, Trieste, Italy
- Charles University, Faculty of Mathematics and Physics, Department of Surface and Plasma Science, V Holešovičkách 2, Prague, 18000, Czech Republic
| | - Oksana Plekan
- Elettra Sincrotrone Trieste, in Area Science Park, 34149 Basovizza, Trieste, Italy
| | - Cesare Grazioli
- CNR - Istituto Officina dei Materiali (IOM), Area Science Park - Basovizza, S.S. 14 Km 163.5, Trieste 34149, Italy
| | - Marcello Coreno
- CNR - Istituto di Struttura della Materia (ISM), Area Science Park - Basovizza, S.S. 14 Km 163.5, Trieste 34149, Italy
| | - Robert Richter
- Elettra Sincrotrone Trieste, in Area Science Park, 34149 Basovizza, Trieste, Italy
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5
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Belinskaia DA, Batalova AA, Voronina PA, Shmurak VI, Vovk MA, Polyanichko AM, Sych TS, Samodurova KV, Antonova VK, Volkova AA, Gerda BA, Jenkins RO, Goncharov NV. Modulation of Albumin Esterase Activity by Warfarin and Diazepam. Int J Mol Sci 2024; 25:11543. [PMID: 39519097 PMCID: PMC11546595 DOI: 10.3390/ijms252111543] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2024] [Revised: 10/13/2024] [Accepted: 10/22/2024] [Indexed: 11/16/2024] Open
Abstract
Data are accumulating on the hydrolytic activity of serum albumin towards esters and organophosphates. Previously, with the help of the technology of proton nuclear magnetic resonance (1H NMR) spectroscopy, we observed the yield of acetate in the solution of bovine serum albumin and p-nitrophenyl acetate (NPA). Thus, we showed that albumin possesses true esterase activity towards NPA. Then, using the methods of molecular docking and molecular dynamics, we established site Sudlow I as the catalytic center of true esterase activity of albumin. In the present work, to expand our understanding of the molecular mechanisms of albumin pseudoesterase and true esterase activity, we investigated-in experiments in vitro and in silico-the interaction of anticoagulant warfarin (WRF, specific ligand of site Sudlow I) and benzodiazepine diazepam (DIA, specific ligand of site Sudlow II) with albumins of different species, and determined how the binding of WRF and DIA affects the hydrolysis of NPA by albumin. It was found that the characteristics of the binding modes of WRF in site Sudlow I and DIA in site Sudlow II of human (HSA), bovine (BSA), and rat (RSA) albumins have species differences, which are more pronounced for site Sudlow I compared to site Sudlow II, and less pronounced between HSA and RSA compared to BSA. WRF competitively inhibits true esterase activity of site Sudlow I towards NPA and does not affect the functioning of site Sudlow II. Diazepam can slow down true esterase activity of site Sudlow I in noncompetitive manner. It was concluded that site Sudlow I is more receptive to allosteric modulation compared to site Sudlow II.
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Affiliation(s)
- Daria A. Belinskaia
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
| | - Anastasia A. Batalova
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
| | - Polina A. Voronina
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
| | - Vladimir I. Shmurak
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
| | - Mikhail A. Vovk
- St. Petersburg State University, 7/9 Universitetskaya nab., 199034 St. Petersburg, Russia (A.M.P.)
| | - Alexander M. Polyanichko
- St. Petersburg State University, 7/9 Universitetskaya nab., 199034 St. Petersburg, Russia (A.M.P.)
| | - Tomash S. Sych
- St. Petersburg State University, 7/9 Universitetskaya nab., 199034 St. Petersburg, Russia (A.M.P.)
| | - Kamila V. Samodurova
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
| | - Vasilisa K. Antonova
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
| | - Anastasia A. Volkova
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
| | - Bogdan A. Gerda
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
| | - Richard O. Jenkins
- Leicester School of Allied Health Sciences, De Montfort University, The Gateway, Leicester LE1 9BH, UK
| | - Nikolay V. Goncharov
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, pr. Torez 44, 194223 St. Petersburg, Russia
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6
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Grandini GS, Ximenes VF, Morgon NH, de Souza AR. Induced Chirality in Sulfasalazine by Complexation With Albumins: Theoretical and Experimental Study. Chirality 2024; 36:e23696. [PMID: 38965734 DOI: 10.1002/chir.23696] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Revised: 05/22/2024] [Accepted: 05/28/2024] [Indexed: 07/06/2024]
Abstract
Through molecular recognition, drugs can interact and complex with macromolecules circulating in the body. The serum albumin transport protein, found in several mammals, has several interaction sites where these molecules can be located. The drug sulfasalazine (SSZ) is known in the literature to complex at drug site 1 (DS1) in human serum (HSA) and bovine serum (BSA) proteins. This complexation can be studied using various spectroscopic techniques. With the techniques used in this work, absorption in the ultraviolet and visible regions (UV-Vis) and electronic circular dichroism (ECD), a significant difference was observed in the results involving HSA and BSA. The application of theoretical methodologies, such as TD-DFT and molecular docking, suggests that the conformation that SSZ assumes in DS1 of the two proteins is different, which exposes it to different amino acid residues and different hydrophobicities. This difference in conformation may be related to the location of DS1 where the drug interacts or to the possibility of SSZ moving in the BSA site, due to its larger size, and moving less freely in HSA.
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Affiliation(s)
- Giulia Saneti Grandini
- Department of Chemistry, Faculty of Science, São Paulo State University, Bauru, São Paulo, Brazil
| | - Valdecir Farias Ximenes
- Department of Chemistry, Faculty of Science, São Paulo State University, Bauru, São Paulo, Brazil
| | - Nelson Henrique Morgon
- Institute of Chemistry, Department of Physical - Chemistry, University of Campinas, Campinas, São Paulo, Brazil
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7
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Elsayed SA, Elnabky IM, Aboelnga MM, El-Hendawy AM. Palladium(ii), platinum(ii), and silver(i) complexes with 3-acetylcoumarin benzoylhydrazone Schiff base: Synthesis, characterization, biomolecular interactions, cytotoxic activity, and computational studies. RSC Adv 2024; 14:19512-19527. [PMID: 38895519 PMCID: PMC11184370 DOI: 10.1039/d4ra02738h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Accepted: 06/02/2024] [Indexed: 06/21/2024] Open
Abstract
New Pd(ii) (C1), Pt(ii) (C2), and Ag(i) (C3) complexes derived from 3-acetylcoumarin benzoylhydrazone (HL) Schiff base were synthesized and characterized by FTIR, 1H NMR, UV-visible spectroscopies along with elemental analysis (C, H, N), magnetic, molar conductivity measurements, and DFT calculations. The obtained results suggested that the ligand had different behaviors in the complexes: mono-negative tridentate (C1) and neutral tridentate (C2) as an ONO-donor and neutral bidentate (C3) as an ON-donor. Quantum chemistry calculations were performed to validate the stability of the suggested geometries and indicated that all the complexes possess tetra-coordinated metal ions. The binding affinity of all the compounds toward calf thymus (ctDNA), yeast (tRNA), and bovine serum albumin (BSA) was evaluated by absorption/emission spectral titration studies, which revealed the intercalative binding to ctDNA and tRNA and static binding upon complex formation with BSA. Molecular insights into the binding affinity of the characterized complexes were provided through conducting molecular docking analysis. Moreover, the cytotoxic activity (in vitro) of the compounds was screened against human cancerous cell lines and a non-cancerous lung fibroblast (WI38) one using cis-platin as a reference drug. The IC50 and selective index (SI) values indicated the higher cytotoxic activity of all the metal complexes compared to their parent ligand. Among all the compounds, the complex C2 showed the highest activity. These results confirmed the improvement of the anticancer activity of the ligand by incorporating the metal ions. In addition, flow cytometry results showed that complexes C1 and C2 induced cell cycle arrest at S and G1/S, respectively.
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Affiliation(s)
- Shadia A Elsayed
- Chemistry Department, Faculty of Science, Damietta University New Damietta 34517 Egypt
| | - Islam M Elnabky
- Chemistry Department, Faculty of Science, Damietta University New Damietta 34517 Egypt
| | - Mohamed M Aboelnga
- Chemistry Department, Faculty of Science, Damietta University New Damietta 34517 Egypt
| | - Ahmed M El-Hendawy
- Chemistry Department, Faculty of Science, Damietta University New Damietta 34517 Egypt
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8
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Zhang M, Dop RA, Zhang H. Polydopamine-Coated Polymer Nanofibers for In Situ Protein Loading and Controlled Release. ACS OMEGA 2024; 9:14465-14474. [PMID: 38559971 PMCID: PMC10976389 DOI: 10.1021/acsomega.4c00263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 02/22/2024] [Accepted: 02/28/2024] [Indexed: 04/04/2024]
Abstract
Nanofibrous polymeric materials, combined with protein therapeutics, play a significant role in biomedical and pharmaceutical applications. However, the upload of proteins into nanofibers with a high yield and controlled release has been a challenging issue. Here, we report the in situ loading of a model protein (bovine serum albumin) into hydrophilic poly(vinyl alcohol) nanofibers via ice-templating, with a 100% protein drug loading efficiency. These protein-loaded nanofibers were further coated by polydopamine in order to improve the nanofiber stability and achieve a controlled protein release. The mass ratio between poly(vinyl alcohol) and bovine serum albumin influenced the percentage of proteins in composite nanofibers and fiber morphology. More particles and less nanofibers were formed with an increasing percentage of bovine serum albumin. By varying the coating conditions, it was possible to produce a uniform polydopamine coating with tunable thickness, which acted as an additional barrier to reduce burst release and achieve a more sustained release profile.
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Affiliation(s)
- Meina Zhang
- Department
of Chemistry, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K.
| | - Romy A. Dop
- Department
of Chemistry, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K.
- Department
of Clinical Infection, Microbiology and Immunology, Institute of Infection,
Veterinary and Ecological Sciences, University
of Liverpool, Liverpool L69 7ZD, U.K.
| | - Haifei Zhang
- Department
of Chemistry, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K.
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9
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Shankar M, Rani MSS, Gopi P, P A, Pandya P. Structure and energetics of serum protein complex of tea adulterant dye Bismarck brown Y using experimental and computational methods. Comput Biol Chem 2024; 108:107976. [PMID: 37956472 DOI: 10.1016/j.compbiolchem.2023.107976] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 10/25/2023] [Accepted: 10/26/2023] [Indexed: 11/15/2023]
Abstract
Tea, a widely consumed aromatic beverage, is often adulterated with dyes such as Bismarck brown Y (C.I. 21000) (BBY), Prussian blue, and Plumbago, which pose potential health risks. The objective of this study is to analyze how the food dye BBY interacts with serum protein, bovine serum albumin (BSA). This study investigated the BBY-BSA interaction at the molecular level. Fluorescence spectroscopy results showed that the quenching of BSA by BBY is carried out by dynamic quenching mechanism. The displacement assay and molecular docking studies revealed that BBY binds at the flavanone binding site of BSA with hydrophobic interactions. Circular Dichroism results indicate the structural stability of the protein upon BBY binding. Molecular dynamics simulations demonstrated the stability of the complex in a dynamic solvent system, and quantum mechanics calculations showed slight conformational changes of the diaminophenyl ring due to increased hydrophobic interaction. The energetics of gas phase optimized and stable MD structures of BBY indicated similar values which further confirmed that the conformational changes were minor, and it also exhibited a moderate binding with BSA as shown by the MM/PBSA results. This study enhances our understanding of the molecular-level interactions between BBY and BSA, emphasizing the critical role of hydrophobic interactions.
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Affiliation(s)
- Manwi Shankar
- Amity Institute of Forensic Sciences, Amity University, Noida, Uttar Pradesh 201303, India.
| | - Majji Sai Sudha Rani
- Amity Institute of Forensic Sciences, Amity University, Noida, Uttar Pradesh 201303, India.
| | - Priyanka Gopi
- Amity Institute of Forensic Sciences, Amity University, Noida, Uttar Pradesh 201303, India.
| | - Arsha P
- Amity Institute of Forensic Sciences, Amity University, Noida, Uttar Pradesh 201303, India.
| | - Prateek Pandya
- Amity Institute of Forensic Sciences, Amity University, Noida, Uttar Pradesh 201303, India.
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10
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Janoon K, Kuntip N, Niramitranon J, Pongprayoon P. How ractopamine binds to bovine serum albumin at the drug site 1. MOLECULAR SIMULATION 2023. [DOI: 10.1080/08927022.2023.2178239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
Affiliation(s)
- Kanokwan Janoon
- Department of Chemistry, Faculty of Science, Kasetsart University, Bangkok, Thailand
| | - Nattapon Kuntip
- Department of Chemistry, Faculty of Science, Kasetsart University, Bangkok, Thailand
| | - Jitti Niramitranon
- Department of Computer Engineering, Faculty of Engineering, Kasetsart University, Bangkok, Thailand
| | - Prapasiri Pongprayoon
- Department of Chemistry, Faculty of Science, Kasetsart University, Bangkok, Thailand
- Center for Advanced Studies in Nanotechnology for Chemical, Food and Agricultural Industries, KU Institute for Advanced Studies, Kasetsart University, Bangkok, Thailand
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11
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Czub MP, Stewart AJ, Shabalin IG, Minor W. Organism-specific differences in the binding of ketoprofen to serum albumin. IUCRJ 2022; 9:551-561. [PMID: 36071810 PMCID: PMC9438504 DOI: 10.1107/s2052252522006820] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 07/04/2022] [Indexed: 06/15/2023]
Abstract
Serum albumin is a circulatory transport protein that has a highly conserved sequence and structure across mammalian organisms. Its ligand-binding properties are of importance as albumin regulates the pharmacokinetics of many drugs. Due to the high degree of structural conservation between mammalian albumins, nonhuman albumins such as bovine serum albumin or animal models are often used to understand human albumin-drug interactions. Ketoprofen is a popular nonsteroidal anti-inflammatory drug that is transported by albumin. Here, it is revealed that ketoprofen exhibits different binding-site preferences when interacting with human serum albumin compared with other mammalian albumins, despite the conservation of binding sites across species. The reasons for the observed differences were explored, including identifying ketoprofen binding determinants at specific sites and the influence of fatty acids and other ligands on drug binding. The presented results reveal that the drug-binding properties of albumins cannot easily be predicted based only on a complex of albumin from another organism and the conservation of drug sites between species. This work shows that understanding organism-dependent differences is essential for assessing the suitability of particular albumins for structural or biochemical studies.
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Affiliation(s)
- Mateusz P. Czub
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, VA 22908, USA
- Center for Structural Genomics of Infectious Diseases (CSGID), University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, VA 22908, USA
| | - Alan J. Stewart
- School of Medicine, University of St Andrews, St Andrews KY16 9TF, United Kingdom
| | - Ivan G. Shabalin
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, VA 22908, USA
- Center for Structural Genomics of Infectious Diseases (CSGID), University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, VA 22908, USA
| | - Wladek Minor
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, VA 22908, USA
- Center for Structural Genomics of Infectious Diseases (CSGID), University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, VA 22908, USA
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12
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Shaik A, Kondaparthy V, Aveli R, Manwal DD. Studies on the serum glucose reducing effect of vanadium metal complexes on Wistar rats. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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13
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Mao Y, Liu X, Liu Z, He Y, Bao Y, Niu L. Cotton fiber-anchored binary PANI and LDH composite for removal of ketoprofen in environmental water samples. Microchem J 2022. [DOI: 10.1016/j.microc.2022.107324] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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14
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Quantitative Biosensing Based on a Liquid Crystal Marginally Aligned by the PVA/DMOAP Composite for Optical Signal Amplification. BIOSENSORS 2022; 12:bios12040218. [PMID: 35448279 PMCID: PMC9026489 DOI: 10.3390/bios12040218] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Revised: 03/31/2022] [Accepted: 04/06/2022] [Indexed: 12/31/2022]
Abstract
The working principle for a liquid crystal (LC)-based biosensor relies on the disturbance in the orderly aligned LC molecules induced by analytes at the LC-aqueous or LC-solid interface to produce optical signals that can be typically observed under a polarizing optical microscope (POM). Our previous studies demonstrate that such optical response can be enhanced by imposing a weak electric field on LCs so that they are readily tilted from the homeotropic alignment in response to lower concentrations of analytes at the LC-glass interface. In this study, an alternative approach toward signal amplification is proposed by taking advantage of the marginally tilted alignment configuration without applying an electric field. The surface of glass substrates was modified with a binary aligning agent of poly(vinyl alcohol) (PVA) and dimethyloctadecyl[3-(trimethoxysilyl)propyl] ammonium chloride (DMOAP), in which the amount of PVA was fine-tuned so that the interfacing LC molecules were slightly tilted but remained virtually homeotropically aligned to yield no light leakage under the POM in the absence of an analyte. Two nematic LCs, E7 and 5CB, were each sandwiched between two parallel glass substrates coated with the PVA/DMOAP composite for the detection of bovine serum albumin (BSA), a model protein, and cortisol, a small-molecule steroid hormone. Through image analysis of the optical appearance of E7 observed under the POM, a limit of detection (LOD) of 2.5 × 10−8 μg/mL for BSA and that of 3 × 10−6 μg/mL for cortisol were deduced. Both values are significantly lower than that obtained with only DMOAP as the alignment layers, which correspond to signal amplification of more than six orders of magnitude. The new approach for signal amplification reported in this work enables analytes of a wide range of molecular weights to be detected with high sensitivity.
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15
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Visentini FF, Perez AA, Santiago LG. Bioactive compounds: Application of albumin nanocarriers as delivery systems. Crit Rev Food Sci Nutr 2022; 63:7238-7268. [PMID: 35238254 DOI: 10.1080/10408398.2022.2045471] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Enriched products with bioactive compounds (BCs) show the capacity to produce a wide range of possible health effects. Most BCs are essentially hydrophobic and sensitive to environmental factors; so, encapsulation becomes a strategy to solve these problems. Many globular proteins have the intrinsic ability to bind, protect, encapsulate, and introduce BCs into nutraceutical or pharmaceutical matrices. Among them, albumins as human serum albumin (HSA), bovine serum albumin (BSA), ovalbumin (OVA) and α-lactalbumin (ALA) are widely abundant, available, and applied in many industrial sectors, becoming promissory materials to encapsulate BCs. Therefore, this review focuses on researches about the main groups of natural origin BCs (namely phenolic compounds, lipids, vitamins, and carotenoids), the different types of nanostructures based on albumins to encapsulate them and the main fields of application for BCs-loaded albumin systems. In this context, phenolic compounds (catechins, quercetin, and chrysin) are the most extensively BCs studied and encapsulated in albumin-based nanocarriers. Other extensively studied subgroups are stilbenes and curcuminoids. Regarding lipids and vitamins; terpenes, carotenoids (β-carotene), and xanthophylls (astaxanthin) are the most considered. The main application areas of BCs are related to their antitumor, anti-inflammatory, and antioxidant properties. Finally, BSA is the most used albumin to produced BCs-loaded nanocarriers.
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Affiliation(s)
- Flavia F Visentini
- Consejo Nacional de Investigaciones Científicas y Técnicas de la República Argentina, CONICET
- Área de Biocoloides y Nanotecnología, Instituto de Tecnología de Alimentos, Facultad de Ingeniería Química, Universidad Nacional del Litoral, Santa Fe, Argentina
| | - Adrián A Perez
- Consejo Nacional de Investigaciones Científicas y Técnicas de la República Argentina, CONICET
- Área de Biocoloides y Nanotecnología, Instituto de Tecnología de Alimentos, Facultad de Ingeniería Química, Universidad Nacional del Litoral, Santa Fe, Argentina
| | - Liliana G Santiago
- Área de Biocoloides y Nanotecnología, Instituto de Tecnología de Alimentos, Facultad de Ingeniería Química, Universidad Nacional del Litoral, Santa Fe, Argentina
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16
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Saravanan K, Karthikeyan S, Sugarthi S, Stephen AD. Binding studies of known molecules with acetylcholinesterase and bovine serum albumin: A comparative view. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 259:119856. [PMID: 33979725 DOI: 10.1016/j.saa.2021.119856] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 03/25/2021] [Accepted: 04/15/2021] [Indexed: 06/12/2023]
Abstract
The interactions between selected molecules (piperine, tacrine, curcumin and silibinin) and proteins (acetylcholinesterase and bovine serum albumin) were investigated by Fluorescence spectroscopy, molecular docking, molecular dynamics, free energy calculation and non-covalent interaction analysis. These binding characteristics are of huge interest for understanding pharmacokinetic mechanism of the target molecules. The steady-state emission spectrum results showed that presence of static quenching mode for piperine, tacrine, curcumin, silibinin molecules with BSA and AChE complexes separately and this excitation-emission matrix analysis suggest that formation of ground-state complex between piperine, tacrine, curcumin, silibinin drugs and both BSA, AChE protein molecules. And, the binding model from molecular docking analysis of both BSA and AChE with these molecules clearly displayed non-covalent interactions (hydrogen bonding and hydrophobic interactions) which played a significant role in the binding mechanism. Further, the protein-ligand complexes are subjected to molecular dynamics and binding free energy calculation to confirm the stability of the molecule in the active site of BSA and AChE. The NCI (non-covalent interaction) approach supports to visualize the iso-surface of the reduced density gradient of such interactions between protein and ligands.
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Affiliation(s)
- Kandasamy Saravanan
- Faculty of Chemistry, University of Warsaw, Ludwika Pasteura 1, Warsaw 02093, Poland; Department of Physics, Periyar University, Salem 636 011, India.
| | - Subramani Karthikeyan
- G. S. Gill Research Institute, Guru Nanak College (Autonomous), Chennai 600 042, India
| | - Srinivasan Sugarthi
- Department of Physics and Nanotechnology, SRM Institute of Science and Technology, Kattankulathur 603203, India
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17
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Lazniewska J, Agostino M, Hickey SM, Parkinson-Lawrence E, Stagni S, Massi M, Brooks DA, Plush SE. Spectroscopic and Molecular Docking Study of the Interaction between Neutral Re(I) Tetrazolate Complexes and Bovine Serum Albumin. Chemistry 2021; 27:11406-11417. [PMID: 33960039 DOI: 10.1002/chem.202101307] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Indexed: 11/08/2022]
Abstract
Re(I) complexes have potential in biomedical sciences as imaging agents, diagnostics and therapeutics. Thus, it is crucial to understand how Re(I) complexes interact with carrier proteins, like serum albumins. Here, two neutral Re(I) complexes were used (fac-[Re(CO)3 (1,10-phenanthroline)L], in which L is either 4-cyanophenyltetrazolate (1) or 4-methoxycarbonylphenyltetrazole ester (2), to study the interactions with bovine serum albumin (BSA). Spectroscopic measurements, calculations of thermodynamic and Förster resonance energy transfer parameters, as well as molecular modelling, were performed to study differential binding between BSA and complex 1 and 2. Induced-fit docking combined with quantum-polarised ligand docking were employed in what is believed to be a first for a Re(I) complex as a ligand for BSA. Our findings provide a basis for other molecular interaction studies and suggest that subtle functional group alterations at the terminal region of the Re(I) complex have a significant impact on the ability of this class of compounds to interact with BSA.
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Affiliation(s)
- Joanna Lazniewska
- Clinical and Health Sciences, University of South Australia North Terrace, Adelaide, SA 5000, Australia
| | - Mark Agostino
- Curtin Health Innovation Research Institute Curtin Institute for Computation and Curtin Medical School, Curtin University, Kent Street, Perth, WA 6102, Australia
| | - Shane M Hickey
- Clinical and Health Sciences, University of South Australia North Terrace, Adelaide, SA 5000, Australia
| | - Emma Parkinson-Lawrence
- Clinical and Health Sciences, University of South Australia North Terrace, Adelaide, SA 5000, Australia
| | - Stefano Stagni
- Department of Industrial Chemistry ''Toso Montanari'', University of Bologna, Viale del Risorgimento 4, Bologna, Italy
| | - Massimiliano Massi
- Department of Chemistry, Curtin University, Kent Street, Perth, WA 6102, Australia
| | - Douglas A Brooks
- Clinical and Health Sciences, University of South Australia North Terrace, Adelaide, SA 5000, Australia
| | - Sally E Plush
- Clinical and Health Sciences, University of South Australia North Terrace, Adelaide, SA 5000, Australia
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18
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Al-Raqa SY, Khezami K, Kaya EN, Kocak A, Durmuş M. Experimental and theoretical investigation of water-soluble silicon(IV) phthalocyanine and its interaction with bovine serum albumin. J Biol Inorg Chem 2021; 26:235-247. [PMID: 33558997 DOI: 10.1007/s00775-021-01848-w] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2020] [Accepted: 01/13/2021] [Indexed: 01/26/2023]
Abstract
Photodynamic therapy (PDT) has drawn a great scientific attention to cancer treatment over the last decades. However, the bottleneck for the PDT is to find good photosensitizers (PSs) with greater water solubility, no aggregation, and fast discharge from the body. Therefore, there are still a big scientific desire for the synthesizing new rational PSs for treatment of cancer by PDT technique. In favor of improving the competence of PDT, an axially bis[4-(diphenylamino-1,1'-biphenyl-4-ol)] substituted silicon(IV) phthalocyanine (3) was converted to its water-soluble quaternized derivative (3Q). Their structures were fully characterized by single-crystal X-ray diffraction, elemental analysis, and different spectroscopic methods such as FT-IR, UV-Vis, MALDI-TOF, and 1H-NMR. The photophysical properties such as fluorescence quantum yields and lifetimes, and the photochemical properties such as singlet oxygen generation of both phthalocyanines were investigated. Ground and excited-state calculations were performed to explain the observed electronic absorption spectra. The addition of the 4-diphenylamino-1,1'-biphenyl-4-ol groups on the axially positions of the silicon(IV) phthalocyanine increased the singlet oxygen quantum yield from 0.15 to around 0.20. Especially quaternized compound 3Q showed high singlet oxygen quantum yield of 0.26 in water solution. In addition, a spectroscopic investigation of the binding behavior of the quaternized silicon (IV) phthalocyanine complex to bovine serum albumin (BSA) is also studied in this work, confirming the possible interaction. Further theoretical calculations were carried out to find out the plausible-binding regions of the BSA protein. Axially bis[4-(diphenylamino-1,1'-biphenyl-4-ol)] substituted silicon(IV) phthalocyanine (3) was converted to its quaternized water soluble derivative (3Q). The photophysical properties such as fluorescence quantum yields and lifetimes, and the photochemical properties such as singlet oxygen generation of both phthalocyanines were investigated. In addition, a spectroscopic investigation of the binding behavior of the quaternized silicon (IV) phthalocyanine complex to bovine serum albumin (BSA) is also studied in this work, confirming the possible interaction. Further theoretical calculations were carried out to find out the plausible binding regions of the BSA protein.
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Affiliation(s)
- Shaya Y Al-Raqa
- Department of Chemistry, Taibah University, P.O Box 344, Al-Madinah Al Munawrah, Saudi Arabia
| | - Khaoula Khezami
- Department of Chemistry, Gebze Technical University, 41400, Gebze, Kocaeli, Turkey
- Faculty of Science of Bizert, University of Carthage, Tunis, Tunisia
| | - Esra N Kaya
- Department of Chemistry, Gebze Technical University, 41400, Gebze, Kocaeli, Turkey
| | - Abdulkadir Kocak
- Department of Chemistry, Gebze Technical University, 41400, Gebze, Kocaeli, Turkey
| | - Mahmut Durmuş
- Department of Chemistry, Gebze Technical University, 41400, Gebze, Kocaeli, Turkey.
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19
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Kumar D, Desa A, Chougle S, Bhatkalkar SG, Sachar S, Selvaa Kumar C, Ali A. Evaluation of the antiglycating potential of thymoquinone and its interaction with BSA. J Biomol Struct Dyn 2021; 40:8455-8463. [PMID: 33908315 DOI: 10.1080/07391102.2021.1912642] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Abstract
Thymoquinone (TQ) is a bioactive component of medicinal plant, Nigella sativa. It has been identified as promising anti-inflammatory and anti-analgesic properties. In the present study, the TQ has been investigated for physiological interaction as well as binding properties with serum albumin and their thermodynamic parameters at different temperatures. Glycation process was checked with the measurement of fructosamine content, carbonyl content and total advanced glycated end products. The aggregation of amyloid β-structure was measured with Thioflavin-T and the secondary structure of BSA was observed by circular dichroism (CD) in glycated and thermal treated samples. The results indicate that the TQ showed binding interaction (both static and dynamic) with BSA (Kb= 18.31 × 107 M-1 at 293 K) and suppression of glycated products. The glycation-induced and thermal aggregation were prevented and the secondary structure of BSA was maintained. Therefore, these findings suggest that TQ may be used for a therapeutic drug for antiglycation as well as anti-aggregation.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Dinesh Kumar
- Department of Life Sciences, University of Mumbai, Mumbai, India
| | - Amisha Desa
- Department of Life Sciences, University of Mumbai, Mumbai, India
| | - Sana Chougle
- Department of Life Sciences, University of Mumbai, Mumbai, India
| | | | - Shilpee Sachar
- Department of Chemistry, University of Mumbai, Mumbai, India
| | - C Selvaa Kumar
- School of Biotechnology and Bioinformatics, D. Y. Patil Deemed to be University, Navi Mumbai, India
| | - Ahmad Ali
- Department of Life Sciences, University of Mumbai, Mumbai, India
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20
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Macii F, Biver T. Spectrofluorimetric analysis of the binding of a target molecule to serum albumin: tricky aspects and tips. J Inorg Biochem 2021; 216:111305. [PMID: 33261935 DOI: 10.1016/j.jinorgbio.2020.111305] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2020] [Revised: 10/21/2020] [Accepted: 11/07/2020] [Indexed: 12/18/2022]
Abstract
Protein binding heavily modulates drug activity. Therefore, the binding features need to be elucidated when chemistry researchers study new molecules (metal complexes) to be used as drugs. This paper concerns the experimental and data treatment aspects of the mechanistic analysis of the binding to a fluorescent protein (the golden standard serum albumin) by using direct fluorescence titrations. Fluorescence data are not rarely only qualitatively used, neglecting further treatments which could offer a precious detailed picture of the behavior of the drug. We aim to spread a mechanistic approach, discussing the critical aspects for correctly designing the experiments and treating the data. The researcher may confirm adduct formation and evaluate binding constants (Stern-Volmer KSV or other types of K). Also, we discuss here, with the help of literature examples, the correct use of temperature dependence of K to extract thermodynamic parameters, comment on enthalpy-entropy compensation, together with the use of synchronous spectra and exchange experiments to gain information on the binding type and site. We think that this tutorial/critical synopsis can be of help for the increasing community dealing with these experiments, which are valuable but often much more tricky than it might appear at first sight.
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Affiliation(s)
- Francesca Macii
- Department of Chemistry and Industrial Chemistry, University of Pisa, Pisa, Italy
| | - Tarita Biver
- Department of Chemistry and Industrial Chemistry, University of Pisa, Pisa, Italy; Department of Pharmacy, University of Pisa, Pisa, Italy.
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21
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Czub MP, Handing KB, Venkataramany BS, Cooper DR, Shabalin IG, Minor W. Albumin-Based Transport of Nonsteroidal Anti-Inflammatory Drugs in Mammalian Blood Plasma. J Med Chem 2020; 63:6847-6862. [PMID: 32469516 DOI: 10.1021/acs.jmedchem.0c00225] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Every day, hundreds of millions of people worldwide take nonsteroidal anti-inflammatory drugs (NSAIDs), often in conjunction with multiple other medications. In the bloodstream, NSAIDs are mostly bound to serum albumin (SA). We report the crystal structures of equine serum albumin complexed with four NSAIDs (ibuprofen, ketoprofen, etodolac, and nabumetone) and the active metabolite of nabumetone (6-methoxy-2-naphthylacetic acid, 6-MNA). These compounds bind to seven drug-binding sites on SA. These sites are generally well-conserved between equine and human SAs, but ibuprofen binds to both SAs in two drug-binding sites, only one of which is common. We also compare the binding of ketoprofen by equine SA to binding of it by bovine and leporine SAs. Our comparative analysis of known SA complexes with FDA-approved drugs clearly shows that multiple medications compete for the same binding sites, indicating possibilities for undesirable physiological effects caused by drug-drug displacement or competition with common metabolites. We discuss the consequences of NSAID binding to SA in a broader scientific and medical context, particularly regarding achieving desired therapeutic effects based on an individual's drug regimen.
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Affiliation(s)
- Mateusz P Czub
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States.,Center for Structural Genomics of Infectious Diseases (CSGID), University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States
| | - Katarzyna B Handing
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States
| | - Barat S Venkataramany
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States
| | - David R Cooper
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States.,Center for Structural Genomics of Infectious Diseases (CSGID), University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States
| | - Ivan G Shabalin
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States.,Center for Structural Genomics of Infectious Diseases (CSGID), University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States
| | - Wladek Minor
- Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States.,Center for Structural Genomics of Infectious Diseases (CSGID), University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22908, United States
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22
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Guria S, Ghosh A, Upadhyay P, Das MK, Mishra T, Adhikary A, Adhikari S. Small-Molecule Probe for Sensing Serum Albumin with Consequential Self-Assembly as a Fluorescent Organic Nanoparticle for Bioimaging and Drug-Delivery Applications. ACS APPLIED BIO MATERIALS 2020; 3:3099-3113. [PMID: 35025354 DOI: 10.1021/acsabm.0c00146] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Subhajit Guria
- Department of Chemistry, University of Calcutta, 92, A.P.C. Road, Kolkata 700009, West Bengal, India
| | - Avijit Ghosh
- Centre for Research in Nanoscience & Nanotechnology (CRNN), University of Calcutta, Technology Campus, Sector-III, Block-JD 2, Salt Lake, Kolkata 700098, West Bengal, India
| | - Priyanka Upadhyay
- Centre for Research in Nanoscience & Nanotechnology (CRNN), University of Calcutta, Technology Campus, Sector-III, Block-JD 2, Salt Lake, Kolkata 700098, West Bengal, India
| | - Manas kumar Das
- Department of Chemistry, University of Calcutta, 92, A.P.C. Road, Kolkata 700009, West Bengal, India
| | - Tanushree Mishra
- Department of Chemistry, University of Calcutta, 92, A.P.C. Road, Kolkata 700009, West Bengal, India
| | - Arghya Adhikary
- Centre for Research in Nanoscience & Nanotechnology (CRNN), University of Calcutta, Technology Campus, Sector-III, Block-JD 2, Salt Lake, Kolkata 700098, West Bengal, India
| | - Susanta Adhikari
- Department of Chemistry, University of Calcutta, 92, A.P.C. Road, Kolkata 700009, West Bengal, India
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23
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An JM, Moon H, Kim Y, Kang S, Kim Y, Jung Y, Park S, Verwilst P, Kim BM, Kang JS, Kim D. Visualizing mitochondria and mouse intestine with a fluorescent complex of a naphthalene-based dipolar dye and serum albumin. J Mater Chem B 2020; 8:7642-7651. [DOI: 10.1039/d0tb01314e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
A fluorophore–protein complex for the visualization of mitochondria and the mouse intestine was developed. The complex formation of a naphthalene-based dipolar dye and serum albumin was identified and its imaging applications were investigated.
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24
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Ketoprofen-Based Ionic Liquids: Synthesis and Interactions with Bovine Serum Albumin. Molecules 2019; 25:molecules25010090. [PMID: 31881750 PMCID: PMC6983093 DOI: 10.3390/molecules25010090] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2019] [Revised: 12/19/2019] [Accepted: 12/23/2019] [Indexed: 02/03/2023] Open
Abstract
The development of ionic liquids based on active pharmaceutical ingredients (API-ILs) is a possible solution to some of the problems of solid and/or hydrophobic drugs such as low solubility and bioavailability, polymorphism and an alternative route of administration could be suggested as compared to the classical drug. Here, we report for the first time the synthesis and detailed characterization of a series of ILs containing a cation amino acid esters and anion ketoprofen (KETO-ILs). The affinity and the binding mode of the KETO-ILs to bovine serum albumin (BSA) were assessed using fluorescence spectroscopy. All compounds bind in a distance not longer than 6.14 nm to the BSA fluorophores. The estimated binding constants (KA) are in order of 105 L mol−1, which is indicative of strong drug or IL-BSA interactions. With respect to the ketoprofen-BSA system, a stronger affinity of the ILs containing l-LeuOEt, l-ValOBu, and l-ValOEt cation towards BSA is clearly seen. Fourier transformed infrared spectroscopy experiments have shown that all studied compounds induced a rearrangement of the protein molecule upon binding, which is consistent with the suggested static mechanism of BSA fluorescence quenching and formation of complexes between BSA and the drugs. All tested compounds were safe for macrophages.
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