1
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Farooq S, Malla JA, Nedyalkova M, Freire RVM, Mandal I, Crochet A, Salentinig S, Lattuada M, McTernan CT, Kilbinger AFM. Rapid Water Permeation by Aramid Foldamer Nanochannels With Hydrophobic Interiors. Angew Chem Int Ed Engl 2025; 64:e202504170. [PMID: 40127140 PMCID: PMC7617624 DOI: 10.1002/anie.202504170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2025] [Revised: 03/24/2025] [Accepted: 03/24/2025] [Indexed: 03/26/2025]
Abstract
Aquaporins are natural proteins that rapidly transport water across cell membranes, maintaining homeostasis, whilst strictly excluding salt. This has inspired their use in water purification and desalination, a critical emerging need. However, stability, scalability, and cost have prevented their widespread adoption in water purification membrane technologies. As such, attention has turned to the use of artificial water channels, with pore-functionalized polymers and macrocycles providing a powerful alternative. Whilst impressive rates of transport have been achieved, the combination of a scalable, high-yielding synthesis and efficient transport has not yet been reported. Herein, we report such a system, with densely functionalized channel interiors, synthesized by high-yielding living polymerization with low polydispersities, showing high salt exclusion and excellent water transport rates. Our aramid foldamers create artificial water channels with hydrophobic interiors and single-channel water permeability rates of up to 108 water molecules per second per channel, approaching the range of natural aquaporins (c. 109). We show that water transport rates closely correspond to the helical length, with the polymer that most closely matches bilayer thickness showing optimal efficacy, as supported by molecular dynamics (MD) simulations. Our work provides a basis for the scalable synthesis of next-generation artificial water channels.
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Affiliation(s)
- Saquib Farooq
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700Fribourg, Switzerland
| | - Javid Ahmad Malla
- Artificial Molecular Machinery Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK & Department of Chemistry, Britannia House, 7 Trinity Street, King’s College London, SE1 1DB, UK
| | - Miroslava Nedyalkova
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700Fribourg, Switzerland
| | - Rafael V. M. Freire
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700Fribourg, Switzerland
| | - Indradip Mandal
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700Fribourg, Switzerland
| | - Aurelien Crochet
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700Fribourg, Switzerland
| | - Stefan Salentinig
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700Fribourg, Switzerland
| | - Marco Lattuada
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700Fribourg, Switzerland
| | - Charlie T. McTernan
- Artificial Molecular Machinery Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK & Department of Chemistry, Britannia House, 7 Trinity Street, King’s College London, SE1 1DB, UK
| | - Andreas F. M. Kilbinger
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700Fribourg, Switzerland
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2
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Ozturk S, Davis AR, Seaton CC, Male L, Pike SJ. Solvatomorphism of a 2,6-pyridyldicarboxamide-based foldamer. Org Biomol Chem 2025. [PMID: 40114610 DOI: 10.1039/d5ob00342c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2025]
Abstract
A detailed solvatomorphism study conducted on a diamine-terminated 2,6-pyridyldicarboxamide-based foldamer 1 is reported. This investigation establishes the influence of a diverse range of polar and non-polar solvents including chloroform (1A), a trifluorotoluene/dichloromethane mixture (1A), dimethylformamide/diethyl ether (1B), tetrahydrofuran (1·THF), butanone (1·butanone), dichloromethane (1·DCM), a methanol/dichloromethane mixture (1·MeOH) and dimethylsulfoxide (1·DMSO) on the solid-state conformation and crystal packing behaviour of this supramolecular scaffold. Single-crystal X-ray diffraction analysis of the seven solvatomorphs of the studied foldamer (1A, 1B, 1·DCM, 1·THF, 1·butanone, 1·MeOH and 1·DMSO) identified that 1·DCM, 1·THF, 1·butanone, 1·MeOH and 1·DMSO form supramolecular aggregates (e.g., channels/cavities) which incorporate solvent molecules within the voids of the system, leading them to adopt channels of differing dimensions between 3.5 and 9.0 Å. Solid-state analysis identified that a diverse array of intermolecular non-covalent interactions form between the foldamer and the solvent molecule, including N-H⋯O, N-H⋯Cl, O-H⋯O, N-H⋯Cl and C-H⋯O hydrogen-bonding interactions, stabilising the formation of these solvent-mediated channel aggregates within the different solvatomorphs of the studied foldamer. We envisage that these solvatomorphism studies will facilitate the future design of foldamers, particularly given the emerging solid-state applications of foldamers which could hold relevance in the field of crystal engineering or for the uptake of small molecules for long-term use in energy storage and materials chemistry.
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Affiliation(s)
- Sena Ozturk
- School of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
| | - Alexander R Davis
- School of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
| | - Colin C Seaton
- School of Chemistry and Biosciences, Faculty of Life Sciences, University of Bradford, Bradford, West Yorkshire, BD7 1DP, UK
| | - Louise Male
- School of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
| | - Sarah J Pike
- School of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
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3
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Wang Z, Li C, Yin Y, Zhao Y, Bai D, Zhao H. A Water Channel-like Structure Self-Assembled by Nucleosides. Chemistry 2025; 31:e202404045. [PMID: 39632784 DOI: 10.1002/chem.202404045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2024] [Revised: 12/04/2024] [Accepted: 12/04/2024] [Indexed: 12/07/2024]
Abstract
As artificial water channels have received widespread attention, various types of artificial water channels have been reported. However, apart from I-quartet channels, the development of 1D water channels with water wires constructed from small molecules has rarely been reported, because of the difficulty in precisely tuning the dipolar water molecules. Inspired by G-quartet functionalization strategies, this study explored C8 modifications of our previously reported molecule, 2-amino-2'-fluoro-2'-deoxyadenosine (2FA), known for its strong hydration properties and self-assembly capabilities, and investigated its potential for constructing nucleoside-based water channel-like structures. Among all derivatives, 2-amino-8-(4-aminophenyl)-2'-deoxy-2'-fluoro-D-adenosine can form an S-shaped channel as a tetramer, incorporating water wire arrays in the solid state. Such water channel-like structures in nucleoside self-assemblies provide new insights into the development of novel nucleoside-based supramolecular water channel materials.
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Affiliation(s)
- Zheng Wang
- State Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Research Unit of Oral Carcinogenesis and Management & Chinese Academy of Medical Sciences, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China
| | - Changfu Li
- Key Laboratory of Green Chemistry & Technology of Ministry of Education, College of Chemistry, Sichuan University, Chengdu, 610041, Sichuan, China
| | - Yijia Yin
- State Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Research Unit of Oral Carcinogenesis and Management & Chinese Academy of Medical Sciences, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China
| | - Yuxi Zhao
- State Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Research Unit of Oral Carcinogenesis and Management & Chinese Academy of Medical Sciences, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China
| | - Ding Bai
- State Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Research Unit of Oral Carcinogenesis and Management & Chinese Academy of Medical Sciences, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China
| | - Hang Zhao
- State Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Research Unit of Oral Carcinogenesis and Management & Chinese Academy of Medical Sciences, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China
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4
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Mondal A, Mondal D, Sarkar S, Shivpuje U, Mondal J, Talukdar P. Self-Assembled Hydrazide-Based Nanochannels: Efficient Water Translocation and Salt Rejection. Angew Chem Int Ed Engl 2025; 64:e202415510. [PMID: 39158108 DOI: 10.1002/anie.202415510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2024] [Accepted: 08/19/2024] [Indexed: 08/20/2024]
Abstract
Nature has ingeniously developed specialized water transporters that effectively reject ions, including protons, while transporting water across membranes. These natural water channels, known as aquaporins (AQPs), have inspired the creation of Artificial Water Channels (AWCs). However, replicating superfast water transport with synthetic molecular structures that exclude salts and protons is a challenging task. This endeavor demands the coexistence of a suitable water-binding site and a selective filter for precise water transportation. Here, we present small-molecule hydrazides 1 b-1 d that self-assemble into a rosette-type nanochannel assembly through intermolecular hydrogen bonding and π-π stacking interactions, and selectively transport water molecules across lipid bilayer membranes. The experimental analysis demonstrates notable permeability rates for the 1 c derivative, enabling approximately 3.18×108 water molecules to traverse the channel per second. This permeability rate is about one order of magnitude lower than that of AQPs. Of particular significance, the 1 c ensures exclusive passage of water molecules while effectively blocking salts and protons. MD simulation studies confirmed the stability and water transport properties of the water channel assembly inside the bilayer membranes at ambient conditions.
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Affiliation(s)
- Abhishek Mondal
- Department of Chemistry, Indian Institute of Science Education and Research Pune, Dr. Homi Bhabha Road, Pashan, Pune, 411008, Maharashtra, India
- Present Address: Leiden Institute of Chemistry, Leiden University, 2333, CC Leiden, The Netherlands
| | - Debashis Mondal
- Department of Chemistry, Indian Institute of Science Education and Research Pune, Dr. Homi Bhabha Road, Pashan, Pune, 411008, Maharashtra, India
- Present Address: Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Zwirkii Wigury 101, Warsaw, 02-089, Poland
| | - Susmita Sarkar
- Center for Interdisciplinary Sciences, Tata Institute of Fundamental Research, Hyderabad 500046, Telangana, India
| | - Umesh Shivpuje
- Department of Chemistry, Indian Institute of Science Education and Research Pune, Dr. Homi Bhabha Road, Pashan, Pune, 411008, Maharashtra, India
| | - Jagannath Mondal
- Center for Interdisciplinary Sciences, Tata Institute of Fundamental Research, Hyderabad 500046, Telangana, India
| | - Pinaki Talukdar
- Department of Chemistry, Indian Institute of Science Education and Research Pune, Dr. Homi Bhabha Road, Pashan, Pune, 411008, Maharashtra, India
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5
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Oh H, Samineni L, Vogler RJ, Yao C, Behera H, Dhiman R, Horner A, Kumar M. Approaching Ideal Selectivity with Bioinspired and Biomimetic Membranes. ACS NANO 2025; 19:31-53. [PMID: 39718215 DOI: 10.1021/acsnano.4c09699] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2024]
Abstract
The applications of polymeric membranes have grown rapidly compared to traditional separation technologies due to their energy efficiency and smaller footprint. However, their potential is not fully realized due, in part, to their heterogeneity, which results in a "permeability-selectivity" trade-off for most membrane applications. Inspired by the intricate architecture and excellent homogeneity of biological membranes, bioinspired and biomimetic membranes (BBMs) aim to emulate biological membranes for practical applications. This Review highlights the potential of BBMs to overcome the limitations of polymeric membranes by utilizing the "division of labor" between well-defined permeable pores and impermeable matrix molecules seen in biological membranes. We explore the exceptional performance of membranes in biological organisms, focusing on their two major components: membrane proteins (biological channels) and lipid matrix molecules. We then discuss how these natural materials can be replaced with artificial mimics for enhanced properties and how macro-scale BBMs are developed. We highlight key demonstrations in the field of BBMs that draw upon the factors responsible for transport through biological membranes. Additionally, current state-of-the-art methods for fabrication of BBMs are reviewed with potential challenges and prospects for future applications. Finally, we provide considerations for future research that could enable BBMs to progress toward scale-up and enhanced applicability.
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Affiliation(s)
- Hyeonji Oh
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Laxmicharan Samineni
- Department of Civil and Environmental Engineering, Stanford University, Stanford, California 94305, United States
| | - Ronald J Vogler
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Chenhao Yao
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Harekrushna Behera
- Maseeh Department of Civil, Architectural and Environmental Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Raman Dhiman
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Andreas Horner
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstraße 40, 4020 Linz, Austria
| | - Manish Kumar
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
- Maseeh Department of Civil, Architectural and Environmental Engineering, University of Texas at Austin, Austin, Texas 78712, United States
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6
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Huang LB, Su DD, Hardiagon A, Kocsis I, van der Lee A, Sterpone F, Baaden M, Barboiu M. Water-Pore Flow Permeation through Multivalent H-Bonding Pyridine-2,6-dicarboxamide-histamine/Histidine Water Channels. J Am Chem Soc 2025; 147:678-686. [PMID: 39680597 DOI: 10.1021/jacs.4c13072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2024]
Abstract
Aquaporins (AQPs) are natural proteins that can selectively transport water across cell membranes. Heterogeneous H-bonding of water with the inner wall of the pores of AQPs is of maximal importance regarding the optimal stabilization of water clusters within channels, leading to selective pore flow water transport against ions. To gain deeper insight into the water permeation mechanisms, simpler artificial water channels (AWCs) have been developed. Several H-bonding motifs (i.e., imidazole, polyhydroxy, etc.) have been reported as distinct and efficient for water-cluster stabilization within AWCs. Herein we combine two pyridine-2,6 dicarboxamide and imidazole to conceive multivalent U-shaped AWCs able to stabilize, like in AQP water clusters via different H-bonding groups. The crystal structures reveal that stable water superstructures are formed in the solid state, one with hydrophilic pores of ∼9 Å diameter, accommodating water clusters, and one with sterically hindered hydrophobic channels of ∼3 Å diameter, stabilizing water wires. As a result, a single-channel permeability of 1.2 × 107 H2O/s/channel has been achieved by the U-channels, which is only 1 order of magnitude lower than that of AQPs. Moreover, U-channels perform proton transport and completely reject anions and potentially can be applied in desalination membranes. Molecular simulation confirmed that U-channels can generate stable supramolecular porous sponges when they are decorated with hydrophobic alkyl chains featuring multivalent water H-bonding units that serve as water-cluster relays within the channel. To the best of our knowledge, this work is a rare biomimetic example of the importance of water-cluster stabilization via multivalent H-bonding and toward selective transport through water channels.
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Affiliation(s)
- Li-Bo Huang
- Adaptive Supramolecular Nanosystems Group, University of Montpellier, Institut Européen des Membranes, ENSCM-CNRS, UMR5635, Place E. Bataillon CC047, Montpellier 34095, France
- Lehn Institute of Functional Materials, School of Chemistry, Sun Yat-Sen University, Guangzhou 510275, China
| | - Dan-Dan Su
- Adaptive Supramolecular Nanosystems Group, University of Montpellier, Institut Européen des Membranes, ENSCM-CNRS, UMR5635, Place E. Bataillon CC047, Montpellier 34095, France
| | - Arthur Hardiagon
- Laboratoire de Biochimie Théorique, Université Paris Cité, CNRS, 13 rue Pierre et Marie Curie, Paris 75005, France
| | - Istvan Kocsis
- Adaptive Supramolecular Nanosystems Group, University of Montpellier, Institut Européen des Membranes, ENSCM-CNRS, UMR5635, Place E. Bataillon CC047, Montpellier 34095, France
| | - Arie van der Lee
- Adaptive Supramolecular Nanosystems Group, University of Montpellier, Institut Européen des Membranes, ENSCM-CNRS, UMR5635, Place E. Bataillon CC047, Montpellier 34095, France
| | - Fabio Sterpone
- Laboratoire de Biochimie Théorique, Université Paris Cité, CNRS, 13 rue Pierre et Marie Curie, Paris 75005, France
| | - Marc Baaden
- Laboratoire de Biochimie Théorique, Université Paris Cité, CNRS, 13 rue Pierre et Marie Curie, Paris 75005, France
| | - Mihail Barboiu
- Adaptive Supramolecular Nanosystems Group, University of Montpellier, Institut Européen des Membranes, ENSCM-CNRS, UMR5635, Place E. Bataillon CC047, Montpellier 34095, France
- Lehn Institute of Functional Materials, School of Chemistry, Sun Yat-Sen University, Guangzhou 510275, China
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7
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Lee S, Lee BJ, Song G, Jeong KS. Helical aromatic foldamers with tubular cavities capable of accommodating multiple halide ions. Chem Commun (Camb) 2024; 60:14081-14084. [PMID: 39526946 DOI: 10.1039/d4cc05474a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2024]
Abstract
A series of pyridinium-indolocarbazole oligomers with different lengths, capable of adopting helical conformations with tubular cavities, has been synthesized. These oligomers can accommodate two, three, or four iodide ions in a linear arrangement within their cavities, which can be exchanged with other halides.
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Affiliation(s)
- Seungwon Lee
- Department of Chemistry, Yonsei University, Seoul 03722, Republic of Korea.
| | - Byeung Ju Lee
- Department of Chemistry, Yonsei University, Seoul 03722, Republic of Korea.
| | - Geunmoo Song
- Department of Chemistry, Yonsei University, Seoul 03722, Republic of Korea.
| | - Kyu-Sung Jeong
- Department of Chemistry, Yonsei University, Seoul 03722, Republic of Korea.
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8
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Zhang D, Chang W, Shen J, Zeng H. Aromatic foldamer-derived transmembrane transporters. Chem Commun (Camb) 2024; 60:13468-13491. [PMID: 39466066 DOI: 10.1039/d4cc04388j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/29/2024]
Abstract
This review is the first to focus on transmembrane transporters derived from aromatic foldamers, with most studies reported over the past decade. These foldamers have made significant strides in mimicking the essential functions of natural ion channel proteins. With their aromatic backbones rigidified by intramolecular hydrogen bonds or differential repulsive forces, this innovative family of molecules stands out for its structural diversity and functional adaptability. They achieve efficient and selective ion and molecule transport across lipid bilayers via carefully designed helical structures and tunable large cavities. Recent developments in this field highlight the transformative potential of foldamers in therapeutic applications and biomaterial engineering. Key advances include innovative molecular engineering strategies that enable highly selective ion transport by fine-tuning structural and functional attributes. Specific modifications to macrocyclic or helical foldamer structures have allowed precise control over ion selectivity and transport efficiency, with notable selectivity for K+, Li+, H+ and water molecules. Although challenges remain, future directions may focus on more innovative molecular designs, optimizing synthetic methods, improving membrane transport properties, integrating responsive designs that adapt to environmental stimuli, and fostering interdisciplinary collaborations. By emphasizing the pivotal role of aromatic foldamers in modern chemistry, this review aims to inspire further development, offering new molecular toolboxes and strategies to address technological and biological challenges in chemistry, biology, medicine, and materials science.
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Affiliation(s)
- Danyang Zhang
- College of Chemistry Fuzhou University Fuzhou, Fujian 350116, China.
| | - Wenju Chang
- College of Chemistry Fuzhou University Fuzhou, Fujian 350116, China.
| | - Jie Shen
- College of Chemistry Fuzhou University Fuzhou, Fujian 350116, China.
| | - Huaqiang Zeng
- College of Chemistry Fuzhou University Fuzhou, Fujian 350116, China.
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9
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Deng S, Li Z, Yuan L, Shen J, Zeng H. Light-Powered Propeller-like Transporter for Boosted Transmembrane Ion Transport. NANO LETTERS 2024; 24:10750-10758. [PMID: 39177063 DOI: 10.1021/acs.nanolett.4c01884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/24/2024]
Abstract
Membrane-active molecular machines represent a recently emerging, yet important line of expansion in the field of artificial transmembrane transporters. Their hitherto demonstrated limited types (molecular swing, ion fishers, shuttlers, rotors, etc.) certainly call for new inspiring developments. Here, we report a very first motorized ion-transporting carrier-type transporter, i.e., a modularly tunable, light-powered propeller-like transporter derived from Feringa's molecular motor for consistently boosting transmembrane ion transport under continuous UV light irradiation. Based on the EC50 values, the molecular propeller-mediated ion transport activities under UV light irradiation for 300 s are 2.31, 1.74, 2.29, 2.80, and 2.92 times those values obtained without irradiation for Li+, Na+, K+, Rb+, and Cs+ ions, respectively, with EC50 value as low as 0.71 mol % for K+ ion under light irradiation.
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Affiliation(s)
- Shaowen Deng
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350116, China
- College of Chemistry and Bioengineering, Hunan University of Science and Engineering, Yongzhou, Hunan 425100, China
| | - Zhongyan Li
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350116, China
| | - Lin Yuan
- College of Chemistry and Bioengineering, Hunan University of Science and Engineering, Yongzhou, Hunan 425100, China
| | - Jie Shen
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350116, China
| | - Huaqiang Zeng
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350116, China
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10
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Ede SR, Yu H, Sung CH, Kisailus D. Bio-Inspired Functional Materials for Environmental Applications. SMALL METHODS 2024; 8:e2301227. [PMID: 38133492 DOI: 10.1002/smtd.202301227] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Indexed: 12/23/2023]
Abstract
With the global population expected to reach 9.7 billion by 2050, there is an urgent need for advanced materials that can address existing and developing environmental issues. Many current synthesis processes are environmentally unfriendly and often lack control over size, shape, and phase of resulting materials. Based on knowledge from biological synthesis and assembly processes, as well as their resulting functions (e.g., photosynthesis, self-healing, anti-fouling, etc.), researchers are now beginning to leverage these biological blueprints to advance bio-inspired pathways for functional materials for water treatment, air purification and sensing. The result has been the development of novel materials that demonstrate enhanced performance and address sustainability. Here, an overview of the progress and potential of bio-inspired methods toward functional materials for environmental applications is provided. The challenges and opportunities for this rapidly expanding field and aim to provide a valuable resource for researchers and engineers interested in developing sustainable and efficient processes and technologies is discussed.
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Affiliation(s)
- Sivasankara Rao Ede
- Department of Materials Science and Engineering, University of California, Irvine, California, 92697, USA
| | - Haitao Yu
- Department of Materials Science and Engineering, University of California, Irvine, California, 92697, USA
| | - Chao Hsuan Sung
- Department of Materials Science and Engineering, University of California, Irvine, California, 92697, USA
| | - David Kisailus
- Department of Materials Science and Engineering, University of California, Irvine, California, 92697, USA
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11
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Qin L, Zhou J. Finely tuned water structure and transport in functionalized carbon nanotube membranes during desalination. RSC Adv 2024; 14:10560-10573. [PMID: 38567322 PMCID: PMC10985590 DOI: 10.1039/d4ra01217h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2024] [Accepted: 03/26/2024] [Indexed: 04/04/2024] Open
Abstract
Molecular dynamics simulations were performed to tune the transport of water molecules in nanostructured membrane in a desalination process. Four armchair-type (7,7), (8,8), (9,9) and (10,10) carbon nanotubes (CNTs) with pore diameters around 1 nm were chosen, their interior surfaces were modified with -OH, -CH3 and -F groups. Simulation results show that water transport in nanochannel depends on confined water structures which could be regulated by precisely controlled channel diameter and chemical functionalization. Increasing CNT diameter changes water structures from single-file-like to be square and hexagonal-like, then into a disordered pattern, resulting in a concave-shaped trend of water permeance. The -OH functional groups promote structural ordering of water molecules in (7,7) CNT, but disrupt water structures in (8,8) and (9,9) CNTs, and reduce the order degree of water molecules in (10,10) CNT, moreover, exert an attraction to enhance surface friction inside channel. The -CH3 groups induce more strictly single-file movement of water molecules in (7,7) CNT, turning water structures in (8,8) and (9,9) CNTs into two and triangular column arrangements, improving water transport, however, causing again square-like water structure in (10,10) CNT. Fluorinations of CNT make water structure more disordered in (7,7), (9,9) and (10,10) CNTs, while enhance the square water structure in (8,8) CNT with a lower water permeance. Through changing channel diameter and functionalization, the low tetrahedral order corresponds to a more single-file-like water structure, associated with rapid water diffusion and high permeability; an increase in tetrahedrality results in more ice-like water structures, lower water diffusion coefficients, and permeability. The results of this study demonstrate that water transport could be finely regulated via a functionalized CNT membrane.
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Affiliation(s)
- Lanlan Qin
- School of Chemistry and Chemical Engineering, Guangdong Provincial Key Lab for Green Chemical Product Technology, South China University of Technology Guangzhou 510640 P. R. China
| | - Jian Zhou
- School of Chemistry and Chemical Engineering, Guangdong Provincial Key Lab for Green Chemical Product Technology, South China University of Technology Guangzhou 510640 P. R. China
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12
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Al-Gethami W, Qamar MA, Shariq M, Alaghaz ANMA, Farhan A, Areshi AA, Alnasir MH. Emerging environmentally friendly bio-based nanocomposites for the efficient removal of dyes and micropollutants from wastewater by adsorption: a comprehensive review. RSC Adv 2024; 14:2804-2834. [PMID: 38234871 PMCID: PMC10792434 DOI: 10.1039/d3ra06501d] [Citation(s) in RCA: 25] [Impact Index Per Article: 25.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2023] [Accepted: 12/19/2023] [Indexed: 01/19/2024] Open
Abstract
Water scarcity will worsen due to population growth, urbanization, and climate change. Addressing this issue requires developing energy-efficient and cost-effective water purification technologies. One approach is to use biomass to make bio-based materials (BBMs) with valuable attributes. This aligns with the goal of environmental conservation and waste management. Furthermore, the use of biomass is advantageous because it is readily available, economical, and has minimal secondary environmental impact. Biomass materials are ideal for water purification because they are abundant and contain important functional groups like hydroxyl, carboxyl, and amino groups. Functional groups are important for modifying and absorbing contaminants in water. Single-sourced biomass has limitations such as weak mechanical strength, limited adsorption capacity, and chemical instability. Investing in research and development is crucial for the development of efficient methods to produce BBMs and establish suitable water purification application models. This review covers BBM production, modification, functionalization, and their applications in wastewater treatment. These applications include oil-water separation, membrane filtration, micropollutant removal, and organic pollutant elimination. This review explores the production processes and properties of BBMs from biopolymers, highlighting their potential for water treatment applications. Furthermore, this review discusses the future prospects and challenges of developing BBMs for water treatment and usage. Finally, this review highlights the importance of BBMs in solving water purification challenges and encourages innovative solutions in this field.
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Affiliation(s)
- Wafa Al-Gethami
- Chemistry Department, Faculty of Science, Taif University Al-Hawiah, PO Box 11099 Taif City Saudi Arabia
| | - Muhammad Azam Qamar
- Department of Chemistry, School of Science, University of Management and Technology Lahore 54770 Pakistan
| | - Mohammad Shariq
- Department of Physics, College of Science, Jazan University Jazan 45142 Saudi Arabia
| | | | - Ahmad Farhan
- Department of Chemistry, University of Agriculture Faisalabad Faisalabad 38040 Pakistan
| | - Ashwaq A Areshi
- Samtah General Hospital, Ministry of Health Jazan 86735 Saudi Arabia
| | - M Hisham Alnasir
- Department of Physics, RIPHAH International University Islamabad 44000 Pakistan
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13
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Andrei IM, Chen W, Baaden M, Vincent SP, Barboiu M. Proton- versus Cation-Selective Transport of Saccharide Rim-Appended Pillar[5]arene Artificial Water Channels. J Am Chem Soc 2023; 145:21904-21914. [PMID: 37771004 DOI: 10.1021/jacs.3c06335] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/30/2023]
Abstract
Transport of water across cell membranes is a fundamental process for important biological functions. Herein, we focused our research on a new type of symmetrical saccharide rim-functionalized pillar[5]arene (PA-S) artificial water channels with variable pore structures. To point out the versatility of PA-S channels, we systematically varied the nature of anchoring/gate keepers d-mannoside, d-mannuronic acid, or sialic acid H-bonding groups on lateral pillar[5]arene (PA) arms, known as good membrane adhesives, to best describe the influence of the chemical structure on their transport activity. The control of hydrophobic membrane binding-hydrophilic water binding balance is an important feature influencing the channels' structuration and efficiency for a proper insertion into bilayer membranes. The glycosylated PA channels' transport performances were assessed in lipid bilayer membranes, and the channels were able to transport water at high rates (∼106-107 waters/s/channel within 1 order of magnitude as for aquaporins), serving as selective proton railways with total Na+ and K+ rejection. Molecular simulation substantiates the idea that the PAs can generate supramolecular pores, featuring hydrophilic carbohydrate gate-keepers that serve as water-sponge relays at the channel entrance, effectively absorbing and redirecting water within the channel. The present channels may be regarded as a rare biomimetic example of artificial channels presenting proton vs cation transport selectivity performances.
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Affiliation(s)
- Iuliana M Andrei
- Institut Europeen des Membranes (IEM), Adaptive Supramolecular Nanosystems Group (NSA), University of Montpellier, ENSCM-CNRS, UMR 5635, 34095 Montpellier, France
| | - Wenzhang Chen
- Department of Chemistry, Bio-Organic Chemistry Laboratory, University of Namur, Rue de Bruxelles 61, 5000 Namur, Belgium
| | - Marc Baaden
- Université Paris Cité, CNRS, Laboratoire de Biochimie Théorique, 13 rue Pierre et Marie Curie, 75005 Paris, France
| | - Stéphane P Vincent
- Department of Chemistry, Bio-Organic Chemistry Laboratory, University of Namur, Rue de Bruxelles 61, 5000 Namur, Belgium
| | - Mihail Barboiu
- Institut Europeen des Membranes (IEM), Adaptive Supramolecular Nanosystems Group (NSA), University of Montpellier, ENSCM-CNRS, UMR 5635, 34095 Montpellier, France
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14
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Andrei I, Chaix A, Benkhaled BT, Dupuis R, Gomri C, Petit E, Polentarutti M, van der Lee A, Semsarilar M, Barboiu M. Selective Water Pore Recognition and Transport through Self-Assembled Alkyl-Ureido-Trianglamine Artificial Water Channels. J Am Chem Soc 2023; 145:21213-21221. [PMID: 37750755 PMCID: PMC10557096 DOI: 10.1021/jacs.3c02815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Indexed: 09/27/2023]
Abstract
In nature, aquaporins (AQPs) are proteins known for fast water transport through the membrane of living cells. Artificial water channels (AWCs) synthetic counterparts with intrinsic water permeability have been developed with the hope of mimicking the performances and the natural functions of AQPs. Highly selective AWCs are needed, and the design of selectivity filters for water is of tremendous importance. Herein, we report the use of self-assembled trianglamine macrocycles acting as AWCs in lipid bilayer membranes that are able to transport water with steric restriction along biomimetic H-bonding-decorated pores conferring selective binding filters for water. Trianglamine [(±)Δ, (mixture of diastereoisomers) and (R,R)3Δ and (S,S)3Δ], trianglamine hydrochloride (Δ.HCl), and alkyl-ureido trianglamines (n = 4, 6, 8, and 12) [(±)ΔC4, (±)ΔC8, (±)ΔC6, and (±)ΔC12] were synthesized for the studies presented here. The single-crystal X-ray structures confirmed that trianglamines form a tubular superstructure in the solid state. The water translocation is controlled via successive selective H-bonding pores (a diameter of 3 Å) and highly permeable hydrophobic vestibules (a diameter of 5 Å). The self-assembled alkyl-ureido-trianglamines achieve a single-channel permeability of 108 water molecules/second/channel, which is within 1 order of magnitude lower than AQPs with good ability to sterically reject ions and preventing the proton transport. Trianglamines present potential for engineering membranes for water purification and separation technologies.
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Affiliation(s)
- Iuliana
M. Andrei
- Institut
Européen des Membranes (IEM), Univ
Montpellier, CNRS, ENSCM, Montpellier 34090, France
| | - Arnaud Chaix
- Institut
Européen des Membranes (IEM), Univ
Montpellier, CNRS, ENSCM, Montpellier 34090, France
| | | | - Romain Dupuis
- Laboratoire
de Mécanique et Génie Civil (LMGC), University of Montpellier, CNRS—UMR 5508, Montpellier 34090, France
| | - Chaimaa Gomri
- Institut
Européen des Membranes (IEM), Univ
Montpellier, CNRS, ENSCM, Montpellier 34090, France
| | - Eddy Petit
- Institut
Européen des Membranes (IEM), Univ
Montpellier, CNRS, ENSCM, Montpellier 34090, France
| | - Maurizio Polentarutti
- Elettra-Sincrotrone
Trieste S.C.p.A., Strada Statale 14 km 163,5 in AREA Science Park, Basovizza 34149 Trieste, Italy
| | - Arie van der Lee
- Institut
Européen des Membranes (IEM), Univ
Montpellier, CNRS, ENSCM, Montpellier 34090, France
| | - Mona Semsarilar
- Institut
Européen des Membranes (IEM), Univ
Montpellier, CNRS, ENSCM, Montpellier 34090, France
| | - Mihail Barboiu
- Institut
Européen des Membranes (IEM), Univ
Montpellier, CNRS, ENSCM, Montpellier 34090, France
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15
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Shen J, R D, Li Z, Oh H, Behera H, Joshi H, Kumar M, Aksimentiev A, Zeng H. Sulfur-Containing Foldamer-Based Artificial Lithium Channels. Angew Chem Int Ed Engl 2023; 62:e202305623. [PMID: 37539755 DOI: 10.1002/anie.202305623] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 07/18/2023] [Accepted: 08/02/2023] [Indexed: 08/05/2023]
Abstract
Unlike many other biologically relevant ions (Na+ , K+ , Ca2+ , Cl- , etc) and protons, whose cellular concentrations are closely regulated by highly selective channel proteins, Li+ ion is unusual in that its concentration is well tolerated over many orders of magnitude and that no lithium-specific channel proteins have so far been identified. While one naturally evolved primary pathway for Li+ ions to traverse across the cell membrane is through sodium channels by competing with Na+ ions, highly sought-after artificial lithium-transporting channels remain a major challenge to develop. Here we show that sulfur-containing organic nanotubes derived from intramolecularly H-bonded helically folded aromatic foldamers of 3.6 Å in hollow cavity diameter could facilitate highly selective and efficient transmembrane transport of Li+ ions, with high transport selectivity factors of 15.3 and 19.9 over Na+ and K+ ions, respectively.
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Affiliation(s)
- Jie Shen
- College of Chemistry, Fuzhou University, Fuzhou, Fujian, 350116, China
| | - Deepa R
- Department of BioTechnology, Indian Institute of Technology Hyderabad, Kandi, Sangareddy, 502285, Telangana, India
| | - Zhongyan Li
- College of Chemistry, Fuzhou University, Fuzhou, Fujian, 350116, China
| | - Hyeonji Oh
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712, USA
| | - Harekrushna Behera
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712, USA
| | - Himanshu Joshi
- Department of BioTechnology, Indian Institute of Technology Hyderabad, Kandi, Sangareddy, 502285, Telangana, India
| | - Manish Kumar
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712, USA
| | - Aleksei Aksimentiev
- Department of Physics and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61820, USA
| | - Huaqiang Zeng
- College of Chemistry, Fuzhou University, Fuzhou, Fujian, 350116, China
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16
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Su DD, Ulrich S, Barboiu M. Bis-Alkylureido Imidazole Artificial Water Channels. Angew Chem Int Ed Engl 2023; 62:e202306265. [PMID: 37438950 DOI: 10.1002/anie.202306265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Revised: 07/02/2023] [Accepted: 07/12/2023] [Indexed: 07/14/2023]
Abstract
Nature creates aquaporins to effectively transport water, rejecting all ions including protons. Aquaporins (AQPs) has brought inspiration for the development of Artificial Water Channels (AWCs). Imidazole-quartet (I-quartet) was the first AWC that enabled to self-assemble a tubular backbone for rapid water and proton permeation with total ion rejection. Here, we report the discovery of bis-alkylureido imidazole compounds, which outperform the I-quartets by exhibiting ≈3 times higher net and single channel permeabilities (107 H2 O/s/channel) and a ≈2-3 times lower proton conductance. The higher water conductance regime is associated to the high partition of more hydrophobic bis-alkylureido channels in the membrane and to their pore sizes, experiencing larger fluctuations, leading to an increase in the number of water molecules in the channel, with decreasing H-bonding connectivity. This new class of AWCs will open new pathways toward scalable membranes with enhanced water transport performances.
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Affiliation(s)
- Dan-Dan Su
- Institut Européen des Membrane, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, 34095, Montpellier, France
- Institut des Biomolécules Max Mousseron (IBMM), Université de Montpellier, CNRS, ENSCM, 34090, Montpellier, France
| | - Sébastien Ulrich
- Institut des Biomolécules Max Mousseron (IBMM), Université de Montpellier, CNRS, ENSCM, 34090, Montpellier, France
| | - Mihail Barboiu
- Institut Européen des Membrane, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, 34095, Montpellier, France
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17
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Wachlmayr J, Fläschner G, Pluhackova K, Sandtner W, Siligan C, Horner A. Entropic barrier of water permeation through single-file channels. Commun Chem 2023; 6:135. [PMID: 37386127 PMCID: PMC10310842 DOI: 10.1038/s42004-023-00919-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Accepted: 06/02/2023] [Indexed: 07/01/2023] Open
Abstract
Facilitated water permeation through narrow biological channels is fundamental for all forms of life. Despite its significance in health and disease as well as for biotechnological applications, the energetics of water permeation are still elusive. Gibbs free energy of activation is composed of an enthalpic and an entropic component. Whereas the enthalpic contribution is readily accessible via temperature dependent water permeability measurements, estimation of the entropic contribution requires information on the temperature dependence of the rate of water permeation. Here, we estimate, by means of accurate activation energy measurements of water permeation through Aquaporin-1 and by determining the accurate single channel permeability, the entropic barrier of water permeation through a narrow biological channel. Thereby the calculated value for [Formula: see text] = 2.01 ± 0.82 J/(mol·K) links the activation energy of 3.75 ± 0.16 kcal/mol with its efficient water conduction rate of ~1010 water molecules/second. This is a first step in understanding the energetic contributions in various biological and artificial channels exhibiting vastly different pore geometries.
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Affiliation(s)
- Johann Wachlmayr
- Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria
| | - Gotthold Fläschner
- Department of Biosystems Science and Engineering, Eidgenössiche Technische Hochschule (ETH) Zürich, Basel, Switzerland
| | - Kristyna Pluhackova
- Stuttgart Center for Simulation Science, Cluster of Excellence EXC 2075, University of Stuttgart, Universitätsstr. 32, 70569, Stuttgart, Germany
| | - Walter Sandtner
- Center of Physiology and Pharmacology, Institute of Pharmacology, Medical University of Vienna, Schwarzspanierstr. 17A, 1090, Vienna, Austria
| | - Christine Siligan
- Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria
| | - Andreas Horner
- Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria.
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18
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Arai N, Yamamoto E, Koishi T, Hirano Y, Yasuoka K, Ebisuzaki T. Wetting hysteresis induces effective unidirectional water transport through a fluctuating nanochannel. NANOSCALE HORIZONS 2023; 8:652-661. [PMID: 36883765 DOI: 10.1039/d2nh00563h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
We propose a water pump that actively transports water molecules through nanochannels. Spatially asymmetric noise fluctuations imposed on the channel radius cause unidirectional water flow without osmotic pressure, which can be attributed to hysteresis in the cyclic transition between the wetting/drying states. We show that the water transport depends on fluctuations, such as white, Brownian, and pink noises. Because of the high-frequency components in white noise, fast switching of open and closed states inhibits channel wetting. Conversely, pink and Brownian noises generate high-pass filtered net flow. Brownian fluctuation leads to a faster water transport rate, whereas pink noise has a higher capability to overcome pressure differences in the opposite direction. A trade-off relationship exists between the resonant frequency of the fluctuation and the flow amplification. The proposed pump can be considered as an analogy for the reversed Carnot cycle, which is the upper limit of the energy conversion efficiency.
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Affiliation(s)
- Noriyoshi Arai
- Department of Mechanical Engineering, Keio University, Yokohama 223-8522, Japan.
- Computational Astrophysics Laboratory, RIKEN, Wako, Saitama 351-0198, Japan
| | - Eiji Yamamoto
- Department of System Design Engineering, Keio University, Yokohama, 223-8522, Japan
| | - Takahiro Koishi
- Department of Applied Physics, University of Fukui, Bunkyo, Fukui 910-8507, Japan
| | - Yoshinori Hirano
- Department of Mechanical Engineering, Keio University, Yokohama 223-8522, Japan.
| | - Kenji Yasuoka
- Department of Mechanical Engineering, Keio University, Yokohama 223-8522, Japan.
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19
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Walsh MP, Barclay JA, Begg CS, Xuan J, Kitching MO. Conglomerate Crystallization in the Cambridge Structural Database (2020-2021). CRYSTAL GROWTH & DESIGN 2023; 23:2837-2844. [PMID: 37038395 PMCID: PMC10080650 DOI: 10.1021/acs.cgd.3c00019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 03/03/2023] [Indexed: 06/19/2023]
Abstract
Conglomerate crystals are materials capable of undergoing spontaneous resolution and were responsible for the discovery of molecular chirality. Their relevance to modern chemical and crystallographic sciences has been hindered by the difficulty in identifying and searching materials with this characteristic ability to spontaneously bias their own enantioenrichment. With the release of the November 2021 distribution of the Cambridge Structural Database (CSD) (version 5.43), a fresh quantity of chiral conglomerate crystals is expected to have been published in the CSD without identification. Indeed, no crystals in the CSD have been identified as a spontaneously resolving conglomerate crystal in their crystallographic information file since the 2019 release, despite the deposition of over 108,000 new crystal structures into the database over the same time period. A manual inspection of crystals deposited between 2020 and 2021 was conducted to identify 343 new chiral materials which exhibit conglomerate crystallization behavior. It is hoped that the continued manual curation of this list will aid those in the crystallographic and synthetic communities to study and exploit this spontaneous enantioenrichment behavior.
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Affiliation(s)
- Mark P. Walsh
- Process
Research and Development, Carbogen Amcis
Ltd., 303 Clayton Lane, Manchester, M11 4SX, U.K.
| | - James A. Barclay
- Department
of Chemistry, Durham University, Lower Mount Joy, South Rd., Durham, DH1 3LE, U.K.
| | - Callum S. Begg
- Department
of Chemistry, Durham University, Lower Mount Joy, South Rd., Durham, DH1 3LE, U.K.
| | - Jinyi Xuan
- Department
of Chemistry, Durham University, Lower Mount Joy, South Rd., Durham, DH1 3LE, U.K.
| | - Matthew O. Kitching
- Department
of Chemistry, Durham University, Lower Mount Joy, South Rd., Durham, DH1 3LE, U.K.
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20
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Jin L, Sun C, Li Z, Shen J, Zeng H. A K +-selective channel with a record-high K +/Na + selectivity of 20.1. Chem Commun (Camb) 2023; 59:3610-3613. [PMID: 36891811 DOI: 10.1039/d2cc04396c] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/26/2023]
Abstract
For compounds each containing a phenylalanine moiety with its two ends amidated to have a 15-crown-5 unit and an alkyl chain, a simple tuning of the alkyl chain length delivered a K+-selective channel with a record-high K+/Na+ selectivity of 20.1.
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Affiliation(s)
- Lei Jin
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an, Shannxi 710072, China
| | - Chang Sun
- College of Textile Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China
| | - Zhongyan Li
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350116, China.
| | - Jie Shen
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an, Shannxi 710072, China
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350116, China.
| | - Huaqiang Zeng
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an, Shannxi 710072, China
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350116, China.
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21
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Yılmaz H, Erdoğan EM, Ergenekon P, Özkan M. Comparison of ion selectivities of nitrite channel NirC and water channel aquaporin. World J Microbiol Biotechnol 2023; 39:120. [PMID: 36918441 DOI: 10.1007/s11274-023-03553-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Accepted: 02/20/2023] [Indexed: 03/16/2023]
Abstract
nirC gene coding for the nitrite channel of E. coli K12 was cloned into the pET28a vector and expressed in E. coli BL21 cells. 28.5 kDa NirC monomer was purified from membrane components of E. coli. Selectivity of NirC for different ions including nitrite, nitrate, sulfate, formate, and acetate anions, and a divalent cation, magnesium, was compared with that of bacterial aquaporin from Halomonas elongata. Water and ion permeability values were determined by measuring the light scattering rates of proteoliposomes containing NirC and aquaporins during their water loss and gain. NirC shows a selective permeability to nitrite and is more resistant to the entry of other anions as compared to aquaporin. The single channel permeability of NirC for nitrite is about 10-fold that of a single aquaporin channel. Both aquaporin and NirC channel proteins were impermeable to MgCl2 and (NH4)2SO4 and their permeability to other tested ions was remarkably lower as compared to nitrite ions. The study also presents the 3D model and channel characteristics of NirC. The translocation channel of E. coli NirC is determined to be larger, and its length is shorter than aquaporin channels. Although the NirC channel throat is more hydrophobic than aquaporin, its water permeability is almost equal to that of aquaporin. The hydrophobic nature of the NirC channel might play an important role in the selective permeability of the channel for nitrite ions.
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Affiliation(s)
- Hilal Yılmaz
- Environmental Engineering Department, Gebze Technical University, 41400, Kocaeli, Turkey
| | - Esra Meşe Erdoğan
- Environmental Engineering Department, Gebze Technical University, 41400, Kocaeli, Turkey
| | - Pınar Ergenekon
- Environmental Engineering Department, Gebze Technical University, 41400, Kocaeli, Turkey
| | - Melek Özkan
- Environmental Engineering Department, Gebze Technical University, 41400, Kocaeli, Turkey.
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22
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Liang L, Qin F, Wang S, Wu J, Li R, Wang Z, Ren M, Liu D, Wang D, Astruc D. Overview of the materials design and sensing strategies of nanopore devices. Coord Chem Rev 2023. [DOI: 10.1016/j.ccr.2022.214998] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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23
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Biophysical quantification of unitary solute and solvent permeabilities to enable translation to membrane science. J Memb Sci 2022. [DOI: 10.1016/j.memsci.2022.121308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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24
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Differences in water and vapor transport through angstrom-scale pores in atomically thin membranes. Nat Commun 2022; 13:6709. [PMID: 36344569 PMCID: PMC9640652 DOI: 10.1038/s41467-022-34172-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Accepted: 10/12/2022] [Indexed: 11/09/2022] Open
Abstract
The transport of water through nanoscale capillaries/pores plays a prominent role in biology, ionic/molecular separations, water treatment and protective applications. However, the mechanisms of water and vapor transport through nanoscale confinements remain to be fully understood. Angstrom-scale pores (~2.8-6.6 Å) introduced into the atomically thin graphene lattice represent ideal model systems to probe water transport at the molecular-length scale with short pores (aspect ratio ~1-1.9) i.e., pore diameters approach the pore length (~3.4 Å) at the theoretical limit of material thickness. Here, we report on orders of magnitude differences (~80×) between transport of water vapor (~44.2-52.4 g m-2 day-1 Pa-1) and liquid water (0.6-2 g m-2 day-1 Pa-1) through nanopores (~2.8-6.6 Å in diameter) in monolayer graphene and rationalize this difference via a flow resistance model in which liquid water permeation occurs near the continuum regime whereas water vapor transport occurs in the free molecular flow regime. We demonstrate centimeter-scale atomically thin graphene membranes with up to an order of magnitude higher water vapor transport rate (~5.4-6.1 × 104 g m-2 day-1) than most commercially available ultra-breathable protective materials while effectively blocking even sub-nanometer (>0.66 nm) model ions/molecules.
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25
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Qiao D, Chen Y, Tan H, Zhou R, Feng J. De novo design of transmembrane nanopores. Sci China Chem 2022. [DOI: 10.1007/s11426-022-1354-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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26
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Cholesterol-stabilized membrane-active nanopores with anticancer activities. Nat Commun 2022; 13:5985. [PMID: 36216956 PMCID: PMC9551035 DOI: 10.1038/s41467-022-33639-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2021] [Accepted: 09/23/2022] [Indexed: 11/22/2022] Open
Abstract
Cholesterol-enhanced pore formation is one evolutionary means cholesterol-free bacterial cells utilize to specifically target cholesterol-rich eukaryotic cells, thus escaping the toxicity these membrane-lytic pores might have brought onto themselves. Here, we present a class of artificial cholesterol-dependent nanopores, manifesting nanopore formation sensitivity, up-regulated by cholesterol of up to 50 mol% (relative to the lipid molecules). The high modularity in the amphiphilic molecular backbone enables a facile tuning of pore size and consequently channel activity. Possessing a nano-sized cavity of ~ 1.6 nm in diameter, our most active channel Ch-C1 can transport nanometer-sized molecules as large as 5(6)-carboxyfluorescein and display potent anticancer activity (IC50 = 3.8 µM) toward human hepatocellular carcinomas, with high selectivity index values of 12.5 and >130 against normal human liver and kidney cells, respectively. Bacterial cells utilize cholesterol-enhanced pore formation to specifically target eukaryotic cells. Here, the authors present a class of bio-inspired, cholesterol-enhanced nanopores which display anticancer activities in vitro.
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27
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Sobiech TA, Zhong Y, Gong B. Cavity-containing aromatic oligoamide foldamers and macrocycles: progress and future perspectives. Org Biomol Chem 2022; 20:6962-6978. [PMID: 36040143 DOI: 10.1039/d2ob01467j] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
As a major class of foldamers, aromatic oligoamide foldamers have attracted intense interest. The rigidity of aromatic residues and amide linkages allows the development of foldamers with readily predictable, stable conformations. Aromatic oligoamide foldamers having backbones fully constrained by intramolecular hydrogen bonds have attracted wide attention. Depending on their lengths, such foldamers adopt crescent or helical conformations with highly negative inner cavities. Cyclizing the backbone of the aromatic oligoamides affords the corresponding macrocycles which are characterised by persistent shapes and non-deformable inner cavities. With their defined, inner cavities, such aromatic oligoamide foldamers and macrocycles have served as hosts for cationic and polar guests, and as transmembrane channels for transporting ions and molecules. Recent synthetic progress resulted in the construction of multi-turn hollow helices that offer three-dimensional inner pores with adjustable depth. Reducing the number of backbone-constraining hydrogen bonds leads to oligoamides which, with their partially constrained backbones, undergo either solvent- or guest-dependent folding. One class of such aromatic olgioamide foldamders, which offer multiple backbone amide NH groups as hydrogen-bond donors, are designed to bind anions with adjustable affinities.
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Affiliation(s)
- Thomas A Sobiech
- Department of Chemistry, University at Buffalo, the State University of New York, Buffalo, NY 14260, USA.
| | - Yulong Zhong
- Department of Chemistry, University at Buffalo, the State University of New York, Buffalo, NY 14260, USA.
| | - Bing Gong
- Department of Chemistry, University at Buffalo, the State University of New York, Buffalo, NY 14260, USA.
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28
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Mondal D, Dandekar BR, Ahmad M, Mondal A, Mondal J, Talukdar P. Selective and rapid water transportation across a self-assembled peptide-diol channel via the formation of a dual water array. Chem Sci 2022; 13:9614-9623. [PMID: 36091906 PMCID: PMC9400608 DOI: 10.1039/d2sc01737g] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Accepted: 07/20/2022] [Indexed: 11/21/2022] Open
Abstract
Achieving superfast water transport by using synthetically designed molecular artifacts, which exclude salts and protons, is a challenging task in separation science today, as it requires the concomitant presence of a proper water-binding site and necessary selectivity filter for transporting water. Here, we demonstrate the water channel behavior of two configurationally different peptide diol isomers that mimic the natural water channel system, i.e., aquaporins. The solid-state morphology studies showed the formation of a self-assembled aggregated structure, and X-ray crystal structure analysis confirmed the formation of a nanotubular assembly that comprises two distinct water channels. The water permeabilities of all six compounds were evaluated and are found to transport water by excluding salts and protons with a water permeability rate of 5.05 × 108 water molecules per s per channel, which is around one order of magnitude less than the water permeability rate of aquaporins. MD simulation studies showed that the system forms a stable water channel inside the bilayer membrane under ambient conditions, with a 2 × 8 layered assembly, and efficiently transports water molecules by forming two distinct water arrays within the channel.
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Affiliation(s)
- Debashis Mondal
- Department of Chemistry, Indian Institute of Science Education and Research Pune Dr Homi Bhabha Road, Pashan Pune 411008 Maharashtra India
| | - Bhupendra R Dandekar
- Center for Interdisciplinary Sciences, Tata Institute of Fundamental Research Hyderabad 500046 Telangana India
| | - Manzoor Ahmad
- Department of Chemistry, Indian Institute of Science Education and Research Pune Dr Homi Bhabha Road, Pashan Pune 411008 Maharashtra India
| | - Abhishek Mondal
- Department of Chemistry, Indian Institute of Science Education and Research Pune Dr Homi Bhabha Road, Pashan Pune 411008 Maharashtra India
| | - Jagannath Mondal
- Center for Interdisciplinary Sciences, Tata Institute of Fundamental Research Hyderabad 500046 Telangana India
| | - Pinaki Talukdar
- Department of Chemistry, Indian Institute of Science Education and Research Pune Dr Homi Bhabha Road, Pashan Pune 411008 Maharashtra India
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29
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Shen J, Ye R, Liu Z, Zeng H. Hybrid Pyridine–Pyridone Foldamer Channels as M2‐Like Artificial Proton Channels. Angew Chem Int Ed Engl 2022; 61:e202200259. [DOI: 10.1002/anie.202200259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Indexed: 11/05/2022]
Affiliation(s)
- Jie Shen
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
| | - Ruijuan Ye
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
| | - Zhiwei Liu
- Department of Chemistry & Biochemistry Rowan University 201 Mullica Hill Road Glassboro NJ 08028 USA
| | - Huaqiang Zeng
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
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30
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Shen J, Roy A, Joshi H, Samineni L, Ye R, Tu YM, Song W, Skiles M, Kumar M, Aksimentiev A, Zeng H. Fluorofoldamer-Based Salt- and Proton-Rejecting Artificial Water Channels for Ultrafast Water Transport. NANO LETTERS 2022; 22:4831-4838. [PMID: 35674810 DOI: 10.1021/acs.nanolett.2c01137] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Here, we report on a novel class of fluorofoldamer-based artificial water channels (AWCs) that combines excellent water transport rate and selectivity with structural simplicity and robustness. Produced by a facile one-pot copolymerization reaction under mild conditions, the best-performing channel (AWC 1) is an n-C8H17-decorated foldamer nanotube with an average channel length of 2.8 nm and a pore diameter of 5.2 Å. AWC 1 demonstrates an ultrafast water conduction rate of 1.4 × 1010 H2O/s per channel, outperforming the archetypal biological water channel, aquaporin 1, while excluding salts (i.e., NaCl and KCl) and protons. Unique to this class of channels, the inwardly facing C(sp2)-F atoms being the most electronegative in the periodic table are proposed as being critical to enabling the ultrafast and superselective water transport properties by decreasing the channel's cavity and enhancing the channel wall smoothness via reducing intermolecular forces with water molecules or hydrated ions.
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Affiliation(s)
- Jie Shen
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
| | - Arundhati Roy
- Department of Pharmacy, Ludwig Maximilian University Munich Butenandtstraße 5-13, Munich 81377, Germany
| | - Himanshu Joshi
- Department of Physics and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Laxmicharan Samineni
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, Texas 78712, United States
| | - Ruijuan Ye
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
| | - Yu-Ming Tu
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, Texas 78712, United States
| | - Woochul Song
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, Texas 78712, United States
| | - Matthew Skiles
- Department of Civil, Architectural and Environmental Engineering, The University of Texas at Austin, Austin, Texas 78712, United States
| | - Manish Kumar
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, Texas 78712, United States
- Department of Civil, Architectural and Environmental Engineering, The University of Texas at Austin, Austin, Texas 78712, United States
| | - Aleksei Aksimentiev
- Department of Physics and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Huaqiang Zeng
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
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31
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The Unexpected Helical Supramolecular Assembly of a Simple Achiral Acetamide Tecton Generates Selective Water Channels. Chemistry 2022; 28:e202200383. [DOI: 10.1002/chem.202200383] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Indexed: 11/07/2022]
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32
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Lim YJ, Goh K, Wang R. The coming of age of water channels for separation membranes: from biological to biomimetic to synthetic. Chem Soc Rev 2022; 51:4537-4582. [PMID: 35575174 DOI: 10.1039/d1cs01061a] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Water channels are one of the key pillars driving the development of next-generation desalination and water treatment membranes. Over the past two decades, the rise of nanotechnology has brought together an abundance of multifunctional nanochannels that are poised to reinvent separation membranes with performances exceeding those of state-of-the-art polymeric membranes within the water-energy nexus. Today, these water nanochannels can be broadly categorized into biological, biomimetic and synthetic, owing to their different natures, physicochemical properties and methods for membrane nanoarchitectonics. Furthermore, against the backdrop of different separation mechanisms, different types of nanochannel exhibit unique merits and limitations, which determine their usability and suitability for different membrane designs. Herein, this review outlines the progress of a comprehensive amount of nanochannels, which include aquaporins, pillar[5]arenes, I-quartets, different types of nanotubes and their porins, graphene-based materials, metal- and covalent-organic frameworks, porous organic cages, MoS2, and MXenes, offering a comparative glimpse into where their potential lies. First, we map out the background by looking into the evolution of nanochannels over the years, before discussing their latest developments by focusing on the key physicochemical and intrinsic transport properties of these channels from the chemistry standpoint. Next, we put into perspective the fabrication methods that can nanoarchitecture water channels into high-performance nanochannel-enabled membranes, focusing especially on the distinct differences of each type of nanochannel and how they can be leveraged to unlock the as-promised high water transport potential in current mainstream membrane designs. Lastly, we critically evaluate recent findings to provide a holistic qualitative assessment of the nanochannels with respect to the attributes that are most strongly valued in membrane engineering, before discussing upcoming challenges to share our perspectives with researchers for pathing future directions in this coming of age of water channels.
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Affiliation(s)
- Yu Jie Lim
- Singapore Membrane Technology Center, Nanyang Environment and Water Research Institute, Nanyang Technological University, 637141, Singapore. .,School of Civil and Environmental Engineering, Nanyang Technological University, 639798, Singapore.,Interdisciplinary Graduate Programme, Graduate College, Nanyang Technological University, 637553, Singapore
| | - Kunli Goh
- Singapore Membrane Technology Center, Nanyang Environment and Water Research Institute, Nanyang Technological University, 637141, Singapore.
| | - Rong Wang
- Singapore Membrane Technology Center, Nanyang Environment and Water Research Institute, Nanyang Technological University, 637141, Singapore. .,School of Civil and Environmental Engineering, Nanyang Technological University, 639798, Singapore
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33
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Itoh Y, Chen S, Hirahara R, Konda T, Aoki T, Ueda T, Shimada I, Cannon JJ, Shao C, Shiomi J, Tabata KV, Noji H, Sato K, Aida T. Ultrafast water permeation through nanochannels with a densely fluorous interior surface. Science 2022; 376:738-743. [PMID: 35549437 DOI: 10.1126/science.abd0966] [Citation(s) in RCA: 68] [Impact Index Per Article: 22.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Ultrafast water permeation in aquaporins is promoted by their hydrophobic interior surface. Polytetrafluoroethylene has a dense fluorine surface, leading to its strong water repellence. We report a series of fluorous oligoamide nanorings with interior diameters ranging from 0.9 to 1.9 nanometers. These nanorings undergo supramolecular polymerization in phospholipid bilayer membranes to form fluorous nanochannels, the interior walls of which are densely covered with fluorine atoms. The nanochannel with the smallest diameter exhibits a water permeation flux that is two orders of magnitude greater than those of aquaporins and carbon nanotubes. The proposed nanochannel exhibits negligible chloride ion (Cl-) permeability caused by a powerful electrostatic barrier provided by the electrostatically negative fluorous interior surface. Thus, this nanochannel is expected to show nearly perfect salt reflectance for desalination.
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Affiliation(s)
- Yoshimitsu Itoh
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.,Japan Science and Technology Agency (JST), Precursory Research for Embryonic Science and Technology (PRESTO), 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Shuo Chen
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Ryota Hirahara
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Takeshi Konda
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Tsubasa Aoki
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Takumi Ueda
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Ichio Shimada
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.,RIKEN Center for Biosystems Dynamics Research, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
| | - James J Cannon
- Department of Mechanical Engineering, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.,Department of Mechanical Engineering, Faculty of Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Cheng Shao
- Department of Mechanical Engineering, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Junichiro Shiomi
- Department of Mechanical Engineering, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Kazuhito V Tabata
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Hiroyuki Noji
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Kohei Sato
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Takuzo Aida
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.,RIKEN Center for Emergent Matter Science, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
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34
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Shen J, Ye R, Liu Z, Zeng H. Hybrid Pyridine–Pyridone Foldamer Channels as M2‐Like Artificial Proton Channels. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202200259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Jie Shen
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
| | - Ruijuan Ye
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
| | - Zhiwei Liu
- Department of Chemistry & Biochemistry Rowan University 201 Mullica Hill Road Glassboro NJ 08028 USA
| | - Huaqiang Zeng
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
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35
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Wan X, Li S, Tian Y, Xu J, Shen LC, Zuilhof H, Zhang M, Sue ACH. Twisted pentagonal prisms: AgnL2 metal-organic pillars. Chem 2022. [DOI: 10.1016/j.chempr.2022.04.001] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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36
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Mechanisms of Efficient Desalination by a Two-Dimensional Porous Nanosheet Prepared via Bottom-Up Assembly of Cucurbit[6]urils. MEMBRANES 2022; 12:membranes12030252. [PMID: 35323727 PMCID: PMC8954457 DOI: 10.3390/membranes12030252] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 02/15/2022] [Accepted: 02/21/2022] [Indexed: 12/10/2022]
Abstract
Many researchers have examined the desalination performance of various kinds of two-dimensional (2D) porous nanosheets prepared by top-down approaches such as forming pores on the plain based on molecular dynamics (MD) simulations. In contrast, it is rare to find MD simulations addressing the desalination performance of a 2D porous nanosheet prepared by bottom-up approaches. We investigated the desalination performance of a 2D porous nanosheet prepared by the assembly of cucurbit[6]uril (CB[6]) via MD simulation. The model 2D CB[6] nanosheet features CB[6] with the carbonyl-fringed portals of 3.9 Å and the interstitial space filled with hydrophobic linkers and dangling side chains. Our MD simulation demonstrated that the 2D porous CB[6] nanosheet possesses a 70 to 140 times higher water permeance than commercial reverse osmosis membranes while effectively preventing salt passage. The extremely high water permeance and perfect salt rejection stem from not only CB[6]’s nature (hydrophilicity, negative charge, and the right dimension for size exclusion) but also the hydrophobic and tightly filled interstitial space. We also double-checked that the extremely high water permeance was attributable to only CB[6]’s nature, not water leakage, by contrasting it with a 2D nanosheet comprising CB[6]-spermine complexes. Lastly, this paper provides a discussion on a better cucurbituril homologue to prepare a next-generation desalination membrane possessing great potential to such an extent to surpass the 2D porous CB[6] nanosheet based on quantum mechanics calculations.
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37
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Li Y, Fu Y, Hou J. Investigating ion transport through artificial transmembrane channels containing introverted groups. CHINESE J CHEM 2022. [DOI: 10.1002/cjoc.202100836] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Ya‐Wei Li
- Department of Chemistry Fudan University, 220 Handan Road Shanghai 200433 China
| | - Yong‐Hong Fu
- Department of Chemistry Fudan University, 220 Handan Road Shanghai 200433 China
| | - Jun‐Li Hou
- Department of Chemistry Fudan University, 220 Handan Road Shanghai 200433 China
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38
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Boffa V, Fabbri D, Calza P, Revelli D, Christensen PV. Potential of nanofiltration technology in recirculating aquaculture systems in a context of circular economy. CHEMICAL ENGINEERING JOURNAL ADVANCES 2022. [DOI: 10.1016/j.ceja.2022.100269] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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39
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Bindl D, Mandal PK, Allmendinger L, Huc I. Discrete Stacked Dimers of Aromatic Oligoamide Helices. Angew Chem Int Ed Engl 2021; 61:e202116509. [PMID: 34962351 PMCID: PMC9305948 DOI: 10.1002/anie.202116509] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2021] [Indexed: 12/03/2022]
Abstract
Tight binding was observed between the C‐terminal cross section of aromatic oligoamide helices in aqueous solution, leading to the formation of discrete head‐to‐head dimers in slow exchange on the NMR timescale with the corresponding monomers. The nature and structure of the dimers was evidenced by 2D NOESY and DOSY spectroscopy, mass spectrometry and X‐ray crystallography. The binding interface involves a large hydrophobic aromatic surface and hydrogen bonding. Dimerization requires that helices have the same handedness and the presence of a C‐terminal carboxy function. The protonation state of the carboxy group plays a crucial role, resulting in pH dependence of the association. Dimerization is also influenced by neighboring side chains and can be programmed to selectively produce heteromeric aggregates.
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Affiliation(s)
- Daniel Bindl
- LMU München: Ludwig-Maximilians-Universitat Munchen, Pharmacy, GERMANY
| | - Pradeep K Mandal
- LMU München: Ludwig-Maximilians-Universitat Munchen, Pharmacy, GERMANY
| | - Lars Allmendinger
- LMU München: Ludwig-Maximilians-Universitat Munchen, Pharmacy, GERMANY
| | - Ivan Huc
- Ludwig-Maximilians-Universitat Munchen, Pharmacy, Butenandtstraße 5 - 13, 81377, Munich, GERMANY
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40
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Bindl D, Mandal PK, Allmendinger L, Huc I. Discrete Stacked Dimers of Aromatic Oligoamide Helices. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202116509] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Daniel Bindl
- LMU München: Ludwig-Maximilians-Universitat Munchen Pharmacy GERMANY
| | - Pradeep K. Mandal
- LMU München: Ludwig-Maximilians-Universitat Munchen Pharmacy GERMANY
| | - Lars Allmendinger
- LMU München: Ludwig-Maximilians-Universitat Munchen Pharmacy GERMANY
| | - Ivan Huc
- Ludwig-Maximilians-Universitat Munchen Pharmacy Butenandtstraße 5 - 13 81377 Munich GERMANY
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41
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Shen Y, Fei F, Zhong Y, Fan C, Sun J, Hu J, Gong B, Czajkowsky DM, Shao Z. Controlling Water Flow through a Synthetic Nanopore with Permeable Cations. ACS CENTRAL SCIENCE 2021; 7:2092-2098. [PMID: 34963901 PMCID: PMC8704043 DOI: 10.1021/acscentsci.1c01218] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Indexed: 05/19/2023]
Abstract
There is presently intense interest in the development of synthetic nanopores that recapitulate the functional properties of biological water channels for a wide range of applications. To date, all known synthetic water channels have a hydrophobic lumen, and while many exhibit a comparable rate of water transport as biological water channels, there is presently no rationally designed system with the ability to regulate water transport, a critical property of many natural water channels. Here, we describe a self-assembling nanopore consisting of stacked macrocyclic molecules with a hybrid hydrophilic/hydrophobic lumen exhibiting water transport that can be regulated by alkali metal ions. Stopped-flow kinetic assays reveal a non-monotonic-dependence of transport on cation size as well as a strikingly broad range of water flow, from essentially none in the presence of the sodium ion to as high a flow as that of the biological water channel, aquaporin 1, in the absence of the cations. All-atom molecular dynamics simulations show that the mechanism underlying the observed sensitivity is the binding of cations to defined sites within this hybrid pore, which perturbs water flow through the channel. Thus, beyond revealing insights into factors that can modulate a high-flux water transport through sub-nm pores, the obtained results provide a proof-of-concept for the rational design of next-generation, controllable synthetic water channels.
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Affiliation(s)
- Yi Shen
- School
of Biomedical Engineering, Shanghai Jiao
Tong University, Shanghai 200240, China
| | - Fan Fei
- School
of Biomedical Engineering, Shanghai Jiao
Tong University, Shanghai 200240, China
| | - Yulong Zhong
- Department
of Chemistry, The State University of New
York at Buffalo, Buffalo, New York 14260, United States
| | - Chunhai Fan
- School
of Chemistry and Chemical Engineering, Shanghai
Jiao Tong University, Shanghai 200240, China
| | - Jielin Sun
- Shanghai
Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine
(Ministry of Education), Shanghai Jiao Tong
University, Shanghai 200240, China
| | - Jun Hu
- Key
Laboratory of Interfacial Physics and Technology, Shanghai Synchrotron
Radiation Facility, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201204, China
| | - Bing Gong
- Department
of Chemistry, The State University of New
York at Buffalo, Buffalo, New York 14260, United States
| | - Daniel M. Czajkowsky
- School
of Biomedical Engineering, Shanghai Jiao
Tong University, Shanghai 200240, China
| | - Zhifeng Shao
- School
of Biomedical Engineering, Shanghai Jiao
Tong University, Shanghai 200240, China
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42
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Pfeffermann J, Goessweiner-Mohr N, Pohl P. The energetic barrier to single-file water flow through narrow channels. Biophys Rev 2021; 13:913-923. [PMID: 35035593 PMCID: PMC8724168 DOI: 10.1007/s12551-021-00875-w] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Accepted: 10/26/2021] [Indexed: 10/30/2022] Open
Abstract
Various nanoscopic channels of roughly equal diameter and length facilitate single-file diffusion at vastly different rates. The underlying variance of the energetic barriers to transport is poorly understood. First, water partitioning into channels so narrow that individual molecules cannot overtake each other incurs an energetic penalty. Corresponding estimates vary widely depending on how the sacrifice of two out of four hydrogen bonds is accounted for. Second, entropy differences between luminal and bulk water may arise: additional degrees of freedom caused by dangling OH-bonds increase entropy. At the same time, long-range dipolar water interactions decrease entropy. Here, we dissect different contributions to Gibbs free energy of activation, ΔG ‡, for single-file water transport through narrow channels by analyzing experimental results from water permeability measurements on both bare lipid bilayers and biological water channels that (i) consider unstirred layer effects and (ii) adequately count the channels in reconstitution experiments. First, the functional relationship between water permeabilities and Arrhenius activation energies indicates negligible differences between the entropies of intraluminal water and bulk water. Second, we calculate ΔG ‡ from unitary water channel permeabilities using transition state theory. Plotting ΔG ‡ as a function of the number of H-bond donating or accepting pore-lining residues results in a 0.1 kcal/mol contribution per residue. The resulting upper limit for partial water dehydration amounts to 2 kcal/mol. In the framework of biomimicry, our analysis provides valuable insights for the design of synthetic water channels. It thus may aid in the urgent endeavor towards combating global water scarcity.
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Affiliation(s)
| | | | - Peter Pohl
- Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria
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43
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Shen J, Han JJY, Ye R, Zeng H. Molecular rotors as a class of generally highly active ion transporters. Sci China Chem 2021. [DOI: 10.1007/s11426-021-1082-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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44
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Chang HY, Wu KY, Chen WC, Weng JT, Chen CY, Raj A, Hamaguchi HO, Chuang WT, Wang X, Wang CL. Water-Induced Self-Assembly of Amphiphilic Discotic Molecules for Adaptive Artificial Water Channels. ACS NANO 2021; 15:14885-14890. [PMID: 34410689 DOI: 10.1021/acsnano.1c04994] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Inspired by the induced-fit mechanism in nature, we developed the process of water-induced self-assembly (WISA) to make water an active substrate that regulates the self-assembly and function of amphiphilic discotic molecules (ADMs). The ADM is an isotropic liquid that self-assembles only when in contact with water. Characterization results indicate that water fits into the hydrophilic core of the ADMs and induces the formation of a hexagonal columnar phase (Colh), where each column contains a hydrated artificial water channel (AWC). The hydrated AWCs are adaptive rather than static; the dynamic incorporation/removal of water results in the reversible assembly/disassembly of the adaptive AWCs (aAWCs). Furthermore, its dynamic characteristics can enable water to act as an orientation-directional guest molecule that controls the growth direction of the aAWCs. Well-aligned aAWC arrays that showed the ability of water transport were obtained via a "directional WISA" method. In WISA, water thus governs the supramolecular chemistry and function of synthetic molecules as it does with natural materials. By making water an active component in adaptive chemistry and enabling host molecules to dynamically interact with water, this adaptive aquatic material may motivate the development of synthetic molecules further toward biomaterials.
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Affiliation(s)
- Hsi-Yen Chang
- Department of Applied Chemistry, National Yang Ming Chiao Tung University, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Kuan-Yi Wu
- National Synchrotron Radiation Research Center, 101 Hsin-Ann Road, Hsinchu, 30076, Taiwan
| | - Wei-Chun Chen
- Department of Applied Chemistry, National Yang Ming Chiao Tung University, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Jing-Ting Weng
- Department of Applied Chemistry, National Yang Ming Chiao Tung University, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Chin-Yi Chen
- Department of Applied Chemistry, National Yang Ming Chiao Tung University, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Ankit Raj
- Department of Applied Chemistry, National Yang Ming Chiao Tung University, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Hiro-O Hamaguchi
- Department of Applied Chemistry, National Yang Ming Chiao Tung University, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Wei-Tsung Chuang
- National Synchrotron Radiation Research Center, 101 Hsin-Ann Road, Hsinchu, 30076, Taiwan
| | - Xiaosong Wang
- Department of Chemistry, Waterloo Institute for Nanotechnology, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
| | - Chien-Lung Wang
- Department of Applied Chemistry, National Yang Ming Chiao Tung University, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
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45
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Bickerton LE, Johnson TG, Kerckhoffs A, Langton MJ. Supramolecular chemistry in lipid bilayer membranes. Chem Sci 2021; 12:11252-11274. [PMID: 34567493 PMCID: PMC8409493 DOI: 10.1039/d1sc03545b] [Citation(s) in RCA: 49] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Accepted: 07/26/2021] [Indexed: 01/03/2023] Open
Abstract
Lipid bilayer membranes form compartments requisite for life. Interfacing supramolecular systems, including receptors, catalysts, signal transducers and ion transporters, enables the function of the membrane to be controlled in artificial and living cellular compartments. In this perspective, we take stock of the current state of the art of this rapidly expanding field, and discuss prospects for the future in both fundamental science and applications in biology and medicine.
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Affiliation(s)
- Laura E Bickerton
- Department of Chemistry, University of Oxford Chemistry Research Laboratory 12 Mansfield Road Oxford OX1 3TA UK
| | - Toby G Johnson
- Department of Chemistry, University of Oxford Chemistry Research Laboratory 12 Mansfield Road Oxford OX1 3TA UK
| | - Aidan Kerckhoffs
- Department of Chemistry, University of Oxford Chemistry Research Laboratory 12 Mansfield Road Oxford OX1 3TA UK
| | - Matthew J Langton
- Department of Chemistry, University of Oxford Chemistry Research Laboratory 12 Mansfield Road Oxford OX1 3TA UK
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Roy A, Shen J, Joshi H, Song W, Tu YM, Chowdhury R, Ye R, Li N, Ren C, Kumar M, Aksimentiev A, Zeng H. Foldamer-based ultrapermeable and highly selective artificial water channels that exclude protons. NATURE NANOTECHNOLOGY 2021; 16:911-917. [PMID: 34017100 DOI: 10.1038/s41565-021-00915-2] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 04/06/2021] [Indexed: 06/12/2023]
Abstract
The outstanding capacity of aquaporins (AQPs) for mediating highly selective superfast water transport1-7 has inspired recent development of supramolecular monovalent ion-excluding artificial water channels (AWCs). AWC-based bioinspired membranes are proposed for desalination, water purification and other separation applications8-18. While some recent progress has been made in synthesizing AWCs that approach the water permeability and ion selectivity of AQPs, a hallmark feature of AQPs-high water transport while excluding protons-has not been reproduced. We report a class of biomimetic, helically folded pore-forming polymeric foldamers that can serve as long-sought-after highly selective ultrafast water-conducting channels with performance exceeding those of AQPs (1.1 × 1010 water molecules per second for AQP1), with high water-over-monovalent-ion transport selectivity (~108 water molecules over Cl- ion) conferred by the modularly tunable hydrophobicity of the interior pore surface. The best-performing AWC reported here delivers water transport at an exceptionally high rate, namely, 2.5 times that of AQP1, while concurrently rejecting salts (NaCl and KCl) and even protons.
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Affiliation(s)
- Arundhati Roy
- Department of Chemistry, College of Science, Hainan University, Haikou, Hainan, China
- NanoBio Lab, 31 Biopolis Way, The Nanos, Singapore
| | - Jie Shen
- Department of Chemistry, College of Science, Hainan University, Haikou, Hainan, China
| | - Himanshu Joshi
- Department of Physics and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Woochul Song
- Department of Chemical Engineering, The University of Texas at Austin, Austin, TX, USA
| | - Yu-Ming Tu
- Department of Chemical Engineering, The University of Texas at Austin, Austin, TX, USA
| | - Ratul Chowdhury
- Department of Chemical Engineering, The Pennsylvania State University, University Park, PA, USA
| | - Ruijuan Ye
- Department of Chemistry, College of Science, Hainan University, Haikou, Hainan, China
| | - Ning Li
- NanoBio Lab, 31 Biopolis Way, The Nanos, Singapore
| | | | - Manish Kumar
- Department of Civil, Architectural and Environmental Engineering, The University of Texas at Austin, Austin, TX, USA
| | - Aleksei Aksimentiev
- Department of Physics and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Huaqiang Zeng
- Department of Chemistry, College of Science, Hainan University, Haikou, Hainan, China.
- Institute of Advanced Synthesis, Northwestern Polytechnical University, Xi'an, Shaanxi, China.
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47
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Hardiagon A, Murail S, Huang LB, van der Lee A, Sterpone F, Barboiu M, Baaden M. Molecular dynamics simulations reveal statistics and microscopic mechanisms of water permeation in membrane-embedded artificial water channel nanoconstructs. J Chem Phys 2021; 154:184102. [PMID: 34241013 DOI: 10.1063/5.0044360] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Understanding water transport mechanisms at the nanoscale level remains a challenge for theoretical chemical physics. Major advances in chemical synthesis have allowed us to discover new artificial water channels, rivaling with or even surpassing water conductance and selectivity of natural protein channels. In order to interpret experimental features and understand microscopic determinants for performance improvements, numerical approaches based on all-atom molecular dynamics simulations and enhanced sampling methods have been proposed. In this study, we quantify the influence of microscopic observables, such as channel radius and hydrogen bond connectivity, and of meso-scale features, such as the size of self-assembly blocks, on the permeation rate of a self-assembled nanocrystal-like artificial water channel. Although the absolute permeation rate extrapolated from these simulations is overestimated by one order of magnitude compared to the experimental measurement, the detailed analysis of several observed conductive patterns in large assemblies opens new pathways to scalable membranes with enhanced water conductance for the future design.
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Affiliation(s)
- Arthur Hardiagon
- CNRS, Université de Paris, UPR 9080, Laboratoire de Biochimie Théorique, 13 rue Pierre et Marie Curie, F-75005 Paris, France
| | - Samuel Murail
- Université de Paris, CNRS UMR 8251, INSERM ERL U1133, Paris, France
| | - Li-Bo Huang
- Institut Européen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, F-34095 Montpellier, France
| | - Arie van der Lee
- Institut Européen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, F-34095 Montpellier, France
| | - Fabio Sterpone
- CNRS, Université de Paris, UPR 9080, Laboratoire de Biochimie Théorique, 13 rue Pierre et Marie Curie, F-75005 Paris, France
| | - Mihail Barboiu
- Institut Européen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, F-34095 Montpellier, France
| | - Marc Baaden
- CNRS, Université de Paris, UPR 9080, Laboratoire de Biochimie Théorique, 13 rue Pierre et Marie Curie, F-75005 Paris, France
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Liu YZ, Mu X, Chan CK, Robeyns K, Wang CC, Singleton ML. Water binding stabilizes stacked conformations of ferrocene containing sheet-like aromatic oligoamides. Org Biomol Chem 2021; 19:5521-5524. [PMID: 33904564 DOI: 10.1039/d1ob00580d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
While water clusters play an essential role in the stability of biological structures, their ability to stabilize synthetic oligomers is less understood. We have synthesized a heptameric sheet-like aromatic oligoamide foldamer with ferrocene as turn unit. It shows strong interactions with water in the solid state and in solution. The water binding limits the fluxional processes resulting from the flexible ferrocene unit, highlighting the importance of such interactions for conformational studies on this class of molecule.
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Affiliation(s)
- Ya-Zhou Liu
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium.
| | - Xiao Mu
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium.
| | - Cheih-Kai Chan
- Institute of Chemistry, Academia Sinica, Taipei, 115, Taiwan
| | - Koen Robeyns
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium.
| | | | - Michael L Singleton
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium.
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Shen J, Ye R, Zeng H. Crystal Packing‐Guided Construction of Hetero‐Oligomeric Peptidic Ensembles as Synthetic 3‐in‐1 Transporters. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202101489] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Jie Shen
- Department of Chemistry College of Science Hainan University Haikou Hainan 570228 China
| | - Ruijuan Ye
- Department of Chemistry College of Science Hainan University Haikou Hainan 570228 China
| | - Huaqiang Zeng
- Department of Chemistry College of Science Hainan University Haikou Hainan 570228 China
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50
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Shen J, Ye R, Zeng H. Crystal Packing-Guided Construction of Hetero-Oligomeric Peptidic Ensembles as Synthetic 3-in-1 Transporters. Angew Chem Int Ed Engl 2021; 60:12924-12930. [PMID: 33755290 DOI: 10.1002/anie.202101489] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2021] [Revised: 03/22/2021] [Indexed: 12/17/2022]
Abstract
Strategies to generate heteromeric peptidic ensembles via a social self-sorting process are limited. Herein, we report a crystal packing-inspired social self-sorting strategy broadly applicable to diverse types of H-bonded peptidic frameworks. Specifically, a crystal structure of H-bonded alkyl chain-appended monopeptides reveals an inter-chain separation distance of 4.8 Å dictated by the H-bonded amide groups, which is larger than 4.1 Å separation distance desired by the tightly packed straight alkyl chains. This incompatibility results in loosely packed alkyl chains, prompting us to investigate and validate the feasibility of applying bulky tert-butyl groups, modified with an anion-binding group, to alternatively interpenetrate the straight alkyl chains, modified with a crown ether group. Structurally, this social self-sorting approach generates highly stable hetero-oligomeric ensembles, having alternated anion- and cation-binding units vertically aligned to the same side. Functionally, these hetero-oligomeric ensembles promote transmembrane transport of cations, anions and more interestingly zwitterionic species such as amino acids.
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Affiliation(s)
- Jie Shen
- Department of Chemistry, College of Science, Hainan University, Haikou, Hainan, 570228, China
| | - Ruijuan Ye
- Department of Chemistry, College of Science, Hainan University, Haikou, Hainan, 570228, China
| | - Huaqiang Zeng
- Department of Chemistry, College of Science, Hainan University, Haikou, Hainan, 570228, China
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