1
|
Frei H. Controlled electron transfer by molecular wires embedded in ultrathin insulating membranes for driving redox catalysis. PHOTOSYNTHESIS RESEARCH 2023:10.1007/s11120-023-01061-7. [PMID: 38108928 DOI: 10.1007/s11120-023-01061-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Accepted: 11/09/2023] [Indexed: 12/19/2023]
Abstract
Organic bilayers or amorphous silica films of a few nanometer thickness featuring embedded molecular wires offer opportunities for chemically separating while at the same time electronically connecting photo- or electrocatalytic components. Such ultrathin membranes enable the integration of components for which direct coupling is not sufficiently efficient or stable. Photoelectrocatalytic systems for the generation or utilization of renewable energy are among the most prominent ones for which ultrathin separation layers open up new approaches for component integration for improving efficiency. Recent advances in the assembly and spectroscopic, microscopic, and photoelectrochemical characterization have enabled the systematic optimization of the structure, energetics, and density of embedded molecular wires for maximum charge transfer efficiency. The progress enables interfacial designs for the nanoscale integration of the incompatible oxidation and reduction catalysis environments of artificial photosystems and of microbial (or biomolecular)-abiotic systems for renewable energy.
Collapse
Affiliation(s)
- Heinz Frei
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, University of California, Berkeley, CA, 94720, USA.
| |
Collapse
|
2
|
Williams JC, Faillace MS, Gonzalez EJ, Dominguez RE, Knappenberger K, Heredia DA, Moore TA, Moore AL, Allen JP. Mn-porphyrins in a four-helix bundle participate in photo-induced electron transfer with a bacterial reaction center. PHOTOSYNTHESIS RESEARCH 2023:10.1007/s11120-023-01051-9. [PMID: 37910331 DOI: 10.1007/s11120-023-01051-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 09/18/2023] [Indexed: 11/03/2023]
Abstract
Hybrid complexes incorporating synthetic Mn-porphyrins into an artificial four-helix bundle domain of bacterial reaction centers created a system to investigate new electron transfer pathways. The reactions were initiated by illumination of the bacterial reaction centers, whose primary photochemistry involves electron transfer from the bacteriochlorophyll dimer through a series of electron acceptors to the quinone electron acceptors. Porphyrins with diphenyl, dimesityl, or fluorinated substituents were synthesized containing either Mn or Zn. Electrochemical measurements revealed potentials for Mn(III)/Mn(II) transitions that are ~ 0.4 V higher for the fluorinated Mn-porphyrins than the diphenyl and dimesityl Mn-porphyrins. The synthetic porphyrins were introduced into the proteins by binding to a four-helix bundle domain that was genetically fused to the reaction center. Light excitation of the bacteriochlorophyll dimer of the reaction center resulted in new derivative signals, in the 400 to 450 nm region of light-minus-dark spectra, that are consistent with oxidation of the fluorinated Mn(II) porphyrins and reduction of the diphenyl and dimesityl Mn(III) porphyrins. These features recovered in the dark and were not observed in the Zn(II) porphyrins. The amplitudes of the signals were dependent upon the oxidation/reduction midpoint potentials of the bacteriochlorophyll dimer. These results are interpreted as photo-induced charge-separation processes resulting in redox changes of the Mn-porphyrins, demonstrating the utility of the hybrid artificial reaction center system to establish design guidelines for novel electron transfer reactions.
Collapse
Affiliation(s)
- J C Williams
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
| | - M S Faillace
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
| | - E J Gonzalez
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
| | - R E Dominguez
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
| | - K Knappenberger
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
| | - D A Heredia
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
| | - T A Moore
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
| | - A L Moore
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
| | - J P Allen
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA.
| |
Collapse
|
3
|
Hammes-Schiffer S. Exploring Proton-Coupled Electron Transfer at Multiple Scales. NATURE COMPUTATIONAL SCIENCE 2023; 3:291-300. [PMID: 37577057 PMCID: PMC10416817 DOI: 10.1038/s43588-023-00422-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 02/23/2023] [Indexed: 08/15/2023]
Abstract
The coupling of electron and proton transfer is critical for chemical and biological processes spanning a wide range of length and time scales and often occurring in complex environments. Thus, diverse modeling strategies, including analytical theories, quantum chemistry, molecular dynamics, and kinetic modeling, are essential for a comprehensive understanding of such proton-coupled electron transfer reactions. Each of these computational methods provides one piece of the puzzle, and all these pieces must be viewed together to produce the full picture.
Collapse
|
4
|
Theoretical Study the Mechanism of ESIPT Process for pyridine-hydrazone-substituted naphthalimide receptor 4a-E. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.139933] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
|
5
|
Arsenault EA, Guerra WD, Shee J, Reyes Cruz EA, Yoneda Y, Wadsworth BL, Odella E, Urrutia MN, Kodis G, Moore GF, Head-Gordon M, Moore AL, Moore TA, Fleming GR. Concerted Electron-Nuclear Motion in Proton-Coupled Electron Transfer-Driven Grotthuss-Type Proton Translocation. J Phys Chem Lett 2022; 13:4479-4485. [PMID: 35575065 PMCID: PMC9150097 DOI: 10.1021/acs.jpclett.2c00585] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Accepted: 05/02/2022] [Indexed: 06/15/2023]
Abstract
Photoinduced proton-coupled electron transfer and long-range two-proton transport via a Grotthuss-type mechanism are investigated in a biomimetic construct. The ultrafast, nonequilibrium dynamics are assessed via two-dimensional electronic vibrational spectroscopy, in concert with electrochemical and computational techniques. A low-frequency mode is identified experimentally and found to promote double proton and electron transfer, supported by recent theoretical simulations of a similar but abbreviated (non-photoactive) system. Excitation frequency peak evolution and center line slope dynamics show direct evidence of strongly coupled nuclear and electronic degrees of freedom, from which we can conclude that the double proton and electron transfer processes are concerted (up to an uncertainty of 24 fs). The nonequilibrium pathway from the photoexcited Franck-Condon region to the E2PT state is characterized by an ∼110 fs time scale. This study and the tools presented herein constitute a new window into hot charge transfer processes involving an electron and multiple protons.
Collapse
Affiliation(s)
- Eric A. Arsenault
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli
Energy Nanoscience Institute at Berkeley, Berkeley, California 94720, United States
| | - Walter D. Guerra
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
| | - James Shee
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Edgar A. Reyes Cruz
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
- The Biodesign
Institute Center for Applied Structural Discovery (CASD), Tempe, Arizona 85287, United States
| | - Yusuke Yoneda
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli
Energy Nanoscience Institute at Berkeley, Berkeley, California 94720, United States
| | - Brian L. Wadsworth
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
- The Biodesign
Institute Center for Applied Structural Discovery (CASD), Tempe, Arizona 85287, United States
| | - Emmanuel Odella
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
| | - Maria N. Urrutia
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
| | - Gerdenis Kodis
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
- The Biodesign
Institute Center for Applied Structural Discovery (CASD), Tempe, Arizona 85287, United States
| | - Gary F. Moore
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
- The Biodesign
Institute Center for Applied Structural Discovery (CASD), Tempe, Arizona 85287, United States
| | - Martin Head-Gordon
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Ana L. Moore
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
| | - Thomas A. Moore
- School
of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
| | - Graham R. Fleming
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli
Energy Nanoscience Institute at Berkeley, Berkeley, California 94720, United States
| |
Collapse
|
6
|
Yoneda Y, Arsenault EA, Yang SJ, Orcutt K, Iwai M, Fleming GR. The initial charge separation step in oxygenic photosynthesis. Nat Commun 2022; 13:2275. [PMID: 35477708 PMCID: PMC9046298 DOI: 10.1038/s41467-022-29983-1] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Accepted: 04/11/2022] [Indexed: 11/09/2022] Open
Abstract
Photosystem II is crucial for life on Earth as it provides oxygen as a result of photoinduced electron transfer and water splitting reactions. The excited state dynamics of the photosystem II-reaction center (PSII-RC) has been a matter of vivid debate because the absorption spectra of the embedded chromophores significantly overlap and hence it is extremely difficult to distinguish transients. Here, we report the two-dimensional electronic-vibrational spectroscopic study of the PSII-RC. The simultaneous resolution along both the visible excitation and infrared detection axis is crucial in allowing for the character of the excitonic states and interplay between them to be clearly distinguished. In particular, this work demonstrates that the mixed exciton-charge transfer state, previously proposed to be responsible for the far-red light operation of photosynthesis, is characterized by the ChlD1+Phe radical pair and can be directly prepared upon photoexcitation. Further, we find that the initial electron acceptor in the PSII-RC is Phe, rather than PD1, regardless of excitation wavelength. The photosystem II reaction center (PSII-RC) is a model system to understand the initial steps of photosynthesis, but its excited state dynamics is difficult to disentangle with most spectroscopic methods. Here the authors perform a two-dimensional electronic-vibrational spectroscopic study of PSII-RC, providing detailed insight into such dynamics and into the mechanism of charge separation.
Collapse
Affiliation(s)
- Yusuke Yoneda
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States.,Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States.,Research Center of Integrative Molecular Systems, Institute for Molecular Science, National Institute of Natural Sciences, Okazaki, Aichi, 444-8585, Japan
| | - Eric A Arsenault
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States.,Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States.,Kavli Energy Nanoscience Institute at Berkeley, Berkeley, CA, 94720, United States
| | - Shiun-Jr Yang
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States.,Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States
| | - Kaydren Orcutt
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States.,Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States
| | - Masakazu Iwai
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States.,Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, United States
| | - Graham R Fleming
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States. .,Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States. .,Kavli Energy Nanoscience Institute at Berkeley, Berkeley, CA, 94720, United States.
| |
Collapse
|
7
|
Qian Y, Gong F, Li J, Ma P, Zhu H, He L, Xia J. A Solvent-Mediated Excited-State Intermolecular Proton Transfer Fluorescent Probe for Fe 3+ Sensing and Cell Imaging. Molecules 2022; 27:516. [PMID: 35056841 PMCID: PMC8778147 DOI: 10.3390/molecules27020516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Revised: 01/02/2022] [Accepted: 01/06/2022] [Indexed: 12/05/2022] Open
Abstract
Constructing excited-state intermolecular proton transfer (ESIPT-e) fluorophores represents significant challenges due to the harsh requirement of bearing a proton donor-acceptor (D-A) system and their matching proton donating-accepting ability in the same molecule. Herein, we synthesized a new-type ESIPT-e fluorophor (2-APC) using the "four-component one-pot" reaction. By the installing of a cyano-group on pyridine scaffold, the proton donating ability of -NH2 was greatly enhanced, enabling 2-APC to undergo ESIPT-e process. Surprisingly, 2-APC exhibited dual-emissions in protic solvents ethanol and normal fluorescence in aprotic solvents, which is vastly different from that of conventional ESIPT-a dyes. The ESIPT emission can be obviously suppressed by Fe3+ due to the coordination reaction of Fe3+ with the A-D system in 2-APC. From this basis, a highly sensitive and selective method was established using 2-APC as a fluorescent probe, which offers the sensitive detection of Fe3+ ranging from 0 to 13 μM with the detection limit of 7.5 nM. The recovery study of spiked Fe3+ measured by the probe showed satisfactory results (97.2103.4%) with the reasonable RSD ranging from 3.1 to 3.8%. Moreover, 2-APC can also exhibit aggregation-induced effect in poor solvent or solid-state, eliciting strong red fluorescence. 2-APC was also applied to cell-imaging, exhibiting good cell-permeability, biocompatibility and color rendering. This multi-mode emission of 2-APC is significant departure from that of conventional extended p-conjugated systems and ESIPT dyes based on a flat and rigid molecular design. The "one-pot synthesis" strategy for the construction of ESIPT molecules pioneered a new route to achieve tricolor-emissive fluorophores.
Collapse
Affiliation(s)
- You Qian
- College of Chemistry and Chemical Engineering, Changsha University of Science and Technology, Changsha 410114, China; (Y.Q.); (P.M.); (H.Z.); (L.H.); (J.X.)
| | - Fuchun Gong
- College of Chemistry and Chemical Engineering, Changsha University of Science and Technology, Changsha 410114, China; (Y.Q.); (P.M.); (H.Z.); (L.H.); (J.X.)
| | - Jiguang Li
- Crop Research Institute, Hunan Academy of Agricultural Sciences, Changsha 410125, China;
| | - Pan Ma
- College of Chemistry and Chemical Engineering, Changsha University of Science and Technology, Changsha 410114, China; (Y.Q.); (P.M.); (H.Z.); (L.H.); (J.X.)
| | - Hanming Zhu
- College of Chemistry and Chemical Engineering, Changsha University of Science and Technology, Changsha 410114, China; (Y.Q.); (P.M.); (H.Z.); (L.H.); (J.X.)
| | - Lingzhi He
- College of Chemistry and Chemical Engineering, Changsha University of Science and Technology, Changsha 410114, China; (Y.Q.); (P.M.); (H.Z.); (L.H.); (J.X.)
| | - Jiaoyun Xia
- College of Chemistry and Chemical Engineering, Changsha University of Science and Technology, Changsha 410114, China; (Y.Q.); (P.M.); (H.Z.); (L.H.); (J.X.)
| |
Collapse
|
8
|
Gotico P, Herrero C, Protti S, Quaranta A, Sheth S, Fallahpour R, Farran R, Halime Z, Sircoglou M, Aukauloo A, Leibl W. Proton-controlled Action of an Imidazole as Electron Relay in a Photoredox Triad. Photochem Photobiol Sci 2022; 21:247-259. [PMID: 34988933 DOI: 10.1007/s43630-021-00163-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2021] [Accepted: 12/18/2021] [Indexed: 11/24/2022]
Abstract
Electron relays play a crucial role for efficient light-induced activation by a photo-redox moiety of catalysts for multi-electronic transformations. Their insertion between the two units reduces detrimental energy transfer quenching while establishing at the same time unidirectional electron flow. This rectifying function allows charge accumulation necessary for catalysis. Mapping these events in photophysical studies is an important step towards the development of efficient molecular photocatalysts. Three modular complexes comprised of a Ru-chromophore, an imidazole electron relay function, and a terpyridine unit as coordination site for a metal ion were synthesized and the light-induced electron transfer events studied by laser flash photolysis. In all cases, formation of an imidazole radical by internal electron transfer to the oxidized chromophore was observed. The effect of added base evidenced that the reaction sequence depends strongly on the possibility for deprotonation of the imidazole function in a proton-coupled electron transfer process. In the complex with MnII present as a proxy for a catalytic site, a strongly accelerated decay of the imidazole radical together with a decreased rate of back electron transfer from the external electron acceptor to the oxidized complex was observed. This transient formation of an imidazolyl radical is clear evidence for the function of the imidazole group as an electron relay. The implication of the imidazole proton and the external base for the kinetics and energetics of the electron trafficking is discussed.
Collapse
Affiliation(s)
- Philipp Gotico
- Institut de Biologie Intégrative de La Cellule (I2BC), Université Paris Saclay, CEA, CNRS, 91191, Gif-sur-Yvette, France
| | - Christian Herrero
- Institut de Chimie Moléculaire Et Des Matériaux d'Orsay (ICMMO), Université Paris Saclay, 91405, Orsay, France
| | - Stefano Protti
- PhotoGreen Lab, Department of Chemistry, University of Pavia, 27100, Pavia, Italy
| | - Annamaria Quaranta
- Institut de Biologie Intégrative de La Cellule (I2BC), Université Paris Saclay, CEA, CNRS, 91191, Gif-sur-Yvette, France
| | - Sujitraj Sheth
- Institut de Biologie Intégrative de La Cellule (I2BC), Université Paris Saclay, CEA, CNRS, 91191, Gif-sur-Yvette, France
| | - Reza Fallahpour
- Department of Chemistry, University of Zürich UZH, Freiestrasse 3, CH-3012, Bern, Switzerland
| | - Rajaa Farran
- Institut de Biologie Intégrative de La Cellule (I2BC), Université Paris Saclay, CEA, CNRS, 91191, Gif-sur-Yvette, France.,Lebanese International University, Mazraa, Beirut, 146404, Lebanon
| | - Zakaria Halime
- Institut de Chimie Moléculaire Et Des Matériaux d'Orsay (ICMMO), Université Paris Saclay, 91405, Orsay, France
| | - Marie Sircoglou
- Institut de Chimie Moléculaire Et Des Matériaux d'Orsay (ICMMO), Université Paris Saclay, 91405, Orsay, France
| | - Ally Aukauloo
- Institut de Chimie Moléculaire Et Des Matériaux d'Orsay (ICMMO), Université Paris Saclay, 91405, Orsay, France
| | - Winfried Leibl
- Institut de Biologie Intégrative de La Cellule (I2BC), Université Paris Saclay, CEA, CNRS, 91191, Gif-sur-Yvette, France.
| |
Collapse
|
9
|
Kim S, Choi J, Cho DW, Ahn M, Eom S, Kim J, Wee KR, Ihee H. Solvent-modulated proton-coupled electron transfer in an iridium complex with an ESIPT ligand. Chem Sci 2022; 13:3809-3818. [PMID: 35432886 PMCID: PMC8966730 DOI: 10.1039/d1sc07250a] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Accepted: 03/03/2022] [Indexed: 11/21/2022] Open
Abstract
Proton-coupled electron transfer (PCET), an essential process in nature with a well-known example of photosynthesis, has recently been employed in metal complexes to improve the energy conversion efficiency; however, a profound understanding of the mechanism of PCET in metal complexes is still lacking. In this study, we synthesized cyclometalated Ir complexes strategically designed to exploit the excited-state intramolecular proton transfer (ESIPT) of the ancillary ligand and studied their photoinduced PCET in both aprotic and protic solvent environments using femtosecond transient absorption spectroscopy and density functional theory (DFT) and time-dependent DFT calculations. The data reveal solvent-modulated PCET, where charge transfer follows proton transfer in an aprotic solvent and the temporal order of charge transfer and proton transfer is reversed in a protic solvent. In the former case, ESIPT from the enol form to the keto form, which precedes the charge transfer from Ir to the ESIPT ligand, improves the efficiency of metal-to-ligand charge transfer. This finding demonstrates the potential to control the PCET reaction in the desired direction and the efficiency of charge transfer by simply perturbing the external hydrogen-bonding network with the solvent. The iridium complex with an ESIPT ligand shows solvent-modulated proton-coupled electron transfer, in which the temporal order of proton transfer and charge transfer is altered by the solvent environment.![]()
Collapse
Affiliation(s)
- Siin Kim
- Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Republic of Korea
- Center for Advanced Reaction Dynamics, Institute for Basic Science Daejeon 34141 Republic of Korea
| | - Jungkweon Choi
- Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Republic of Korea
- Center for Advanced Reaction Dynamics, Institute for Basic Science Daejeon 34141 Republic of Korea
| | - Dae Won Cho
- Department of Advanced Materials Chemistry, Korea University, Sejong Campus Sejong 30019 Korea
| | - Mina Ahn
- Department of Chemistry and Institute of Natural Science, Daegu University Gyeongsan 38453 Republic of Korea
| | - Seunghwan Eom
- Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Republic of Korea
- Center for Advanced Reaction Dynamics, Institute for Basic Science Daejeon 34141 Republic of Korea
| | - Jungmin Kim
- Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Republic of Korea
- Center for Advanced Reaction Dynamics, Institute for Basic Science Daejeon 34141 Republic of Korea
| | - Kyung-Ryang Wee
- Department of Chemistry and Institute of Natural Science, Daegu University Gyeongsan 38453 Republic of Korea
| | - Hyotcherl Ihee
- Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Republic of Korea
- Center for Advanced Reaction Dynamics, Institute for Basic Science Daejeon 34141 Republic of Korea
| |
Collapse
|
10
|
Chen L, Fournier JA. Probing Hydrogen-Bonding Interactions within Phenol-Benzimidazole Proton-Coupled Electron Transfer Model Complexes with Cryogenic Ion Vibrational Spectroscopy. J Phys Chem A 2021; 125:9288-9297. [PMID: 34652915 DOI: 10.1021/acs.jpca.1c05879] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hydrogen-bonding interactions within a series of phenol-benzimidazole model proton-coupled electron transfer (PCET) dyad complexes are characterized using cryogenic ion vibrational spectroscopy. A highly red-shifted and surprisingly broad (>1000 cm-1) transition is observed in one of the models and assigned to the phenolic OH stretch strongly H-bonded to the N(3) benzimidazole atom. The breadth is attributed to a combination of anharmonic Fermi-resonance coupling between the OH stretch and background doorway states involving OH bending modes and strong coupling of the OH stretch frequency to structural deformations along the proton-transfer coordinate accessible at the vibrational zero-point level. The other models show unexpected protonation of the benzimidazole group upon electrospray ionization instead of at more basic remote amine/amide groups. This leads to the formation of HO-+HN(3) H-bond motifs that are much weaker than the OH-N(3) H-bond arrangement. H-bonding between the N(1)H+ benzimidazole group and the carbonyl on the tyrosine backbone is the stronger and preferred interaction in these complexes. The results show that conjugation effects, secondary H-bond interactions, and H-bond soft modes strongly influence the OH-N(3) interaction and highlight the importance of the direct monitoring of proton stretch transitions in characterizing the proton-transfer reaction coordinate in PCET systems.
Collapse
Affiliation(s)
- Liangyi Chen
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Joseph A Fournier
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| |
Collapse
|
11
|
Coste SC, Brezny AC, Koronkiewicz B, Mayer JM. C-H oxidation in fluorenyl benzoates does not proceed through a stepwise pathway: revisiting asynchronous proton-coupled electron transfer. Chem Sci 2021; 12:13127-13136. [PMID: 34745543 PMCID: PMC8513817 DOI: 10.1039/d1sc03344a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Accepted: 09/09/2021] [Indexed: 11/21/2022] Open
Abstract
2-Fluorenyl benzoates were recently shown to undergo C–H bond oxidation through intramolecular proton transfer coupled with electron transfer to an external oxidant. Kinetic analysis revealed unusual rate-driving force relationships. Our analysis indicated a mechanism of multi-site concerted proton–electron transfer (MS-CPET) for all of these reactions. More recently, an alternative interpretation of the kinetic data was proposed to explain the unusual rate-driving force relationships, invoking a crossover from CPET to a stepwise mechanism with an initial intramolecular proton transfer (PT) (Costentin, Savéant, Chem. Sci., 2020, 11, 1006). Here, we show that this proposed alternative pathway is untenable based on prior and new experimental assessments of the intramolecular PT equilibrium constant and rates. Measurement of the fluorenyl 9-C–H pKa, H/D exchange experiments, and kinetic modelling with COPASI eliminate the possibility of a stepwise mechanism for C–H oxidation in the fluorenyl benzoate series. Implications for asynchronous (imbalanced) MS-CPET mechanisms are discussed with respect to classical Marcus theory and the quantum-mechanical treatment of concerted proton–electron transfer. 2-Fluorenyl benzoates were recently shown to undergo C–H bond oxidation through intramolecular proton transfer coupled with electron transfer to an external oxidant.![]()
Collapse
Affiliation(s)
- Scott C Coste
- Department of Chemistry, Yale University New Haven CT 06520-8107 USA
| | - Anna C Brezny
- Department of Chemistry, Skidmore College Saratoga Springs New York 12866 USA
| | | | - James M Mayer
- Department of Chemistry, Yale University New Haven CT 06520-8107 USA
| |
Collapse
|
12
|
Odella E, Secor M, Elliott M, Groy TL, Moore TA, Hammes-Schiffer S, Moore AL. Multi PCET in symmetrically substituted benzimidazoles. Chem Sci 2021; 12:12667-12675. [PMID: 34703552 PMCID: PMC8494046 DOI: 10.1039/d1sc03782j] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2021] [Accepted: 08/21/2021] [Indexed: 12/02/2022] Open
Abstract
Proton-coupled electron transfer (PCET) reactions depend on the hydrogen-bond connectivity between sites of proton donors and acceptors. The 2-(2′-hydroxyphenyl) benzimidazole (BIP) based systems, which mimic the natural TyrZ-His190 pair of Photosystem II, have been useful for understanding the associated PCET process triggered by one-electron oxidation of the phenol. Substitution of the benzimidazole by an appropriate terminal proton acceptor (TPA) group allows for two-proton translocations. However, the prototropic properties of substituted benzimidazole rings and rotation around the bond linking the phenol and the benzimidazole can lead to isomers that interrupt the intramolecular hydrogen-bonded network and thereby prevent a second proton translocation. Herein, a strategic symmetrization of a benzimidazole based system with two identical TPAs yields an uninterrupted network of intramolecular hydrogen bonds regardless of the isomeric form. NMR data confirms the presence of a single isomeric form in the disubstituted system but not in the monosubstituted system in certain solvents. Infrared spectroelectrochemistry demonstrates a two-proton transfer process associated with the oxidation of the phenol occurring at a lower redox potential in the disubstituted system relative to its monosubstituted analogue. Computational studies support these findings and show that the disubstituted system stabilizes the oxidized two-proton transfer product through the formation of a bifurcated hydrogen bond. Considering the prototropic properties of the benzimidazole heterocycle in the context of multiple PCET will improve the next generation of novel, bioinspired constructs built by concatenated units of benzimidazoles, thus allowing proton translocations at nanoscale length. Proton-coupled electron transfer (PCET) reactions depend on the hydrogen-bond connectivity between sites of proton donors and acceptors.![]()
Collapse
Affiliation(s)
- Emmanuel Odella
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - Maxim Secor
- Department of Chemistry, Yale University New Haven Connecticut 06520-8107 USA
| | - Mackenna Elliott
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - Thomas L Groy
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - Thomas A Moore
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | | | - Ana L Moore
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| |
Collapse
|
13
|
Gong F, Zeng D, Zhu H, Qian Y, He L, Xia J, Cao Z. A solvent-assisted ESIPT fluorescent dye for F -/Ag + sensing and high-resolution imaging of the cilia in live cells. Anal Bioanal Chem 2021; 413:6343-6353. [PMID: 34378069 DOI: 10.1007/s00216-021-03590-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2021] [Revised: 07/22/2021] [Accepted: 07/28/2021] [Indexed: 10/20/2022]
Abstract
A solvent-assisted ESIPT fluorescent dye was synthesized and used as a probe (2-PPN) for the detection of F-/Ag+ and high-resolution imaging of the cilia in live cells. The developed ESIPT fluorophore exhibited strong tautomeric fluorescence in protic solvents and normal emission in aprotic solvents, which is a significant departure from that of conventional intramolecular ESIPT compounds. The H-binding interaction of F- and the chelation of Ag+ with the ESIPT module of 2-PPN resulted in significant tautomeric emission quenching. From this basis, the 2-PPN-based assays for the detection of F- and Ag+ were established. The detection limit for F- and Ag+ sensing is 2.4 nM and 1.5 nM, respectively. The selective experimental results showed that no tautomeric fluorescence change of 2-PPN could be observed in the presence of the other inorganic ions in the same medium, revealing high selectivity of 2-PPN to F- and Ag+. Furthermore, MTT assay experiments proved that the probe 2-PPN exhibited low cytotoxicity and good cell membrane permeability. The probe was also further successfully utilized to image the cilia in vitro MCF7 cells, displaying its high-resolution imaging performance.Graphical abstract.
Collapse
Affiliation(s)
- Fuchun Gong
- College of Chemistry and Food Engineering, Changsha University of Science and Technology, Changsha, 410114, Hunan, People's Republic of China.
| | - Dan Zeng
- College of Chemistry and Food Engineering, Changsha University of Science and Technology, Changsha, 410114, Hunan, People's Republic of China
| | - Hanming Zhu
- College of Chemistry and Food Engineering, Changsha University of Science and Technology, Changsha, 410114, Hunan, People's Republic of China
| | - You Qian
- College of Chemistry and Food Engineering, Changsha University of Science and Technology, Changsha, 410114, Hunan, People's Republic of China
| | - Lingzhi He
- College of Chemistry and Food Engineering, Changsha University of Science and Technology, Changsha, 410114, Hunan, People's Republic of China
| | - Jiaoyun Xia
- College of Chemistry and Food Engineering, Changsha University of Science and Technology, Changsha, 410114, Hunan, People's Republic of China
| | - Zhong Cao
- College of Chemistry and Food Engineering, Changsha University of Science and Technology, Changsha, 410114, Hunan, People's Republic of China
| |
Collapse
|
14
|
Arsenault EA, Schile AJ, Limmer DT, Fleming GR. Vibronic coupling in energy transfer dynamics and two-dimensional electronic-vibrational spectra. J Chem Phys 2021; 155:054201. [PMID: 34364357 DOI: 10.1063/5.0056477] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
We introduce a heterodimer model in which multiple mechanisms of vibronic coupling and their impact on energy transfer can be explicitly studied. We consider vibronic coupling that arises through either Franck-Condon activity in which each site in the heterodimer has a local electron-phonon coupling or Herzberg-Teller activity in which the transition dipole moment coupling the sites has an explicit vibrational mode-dependence. We have computed two-dimensional electronic-vibrational (2DEV) spectra for this model while varying the magnitude of these two effects and find that 2DEV spectra contain static and dynamic signatures of both types of vibronic coupling. Franck-Condon activity emerges through a change in the observed excitonic structure, while Herzberg-Teller activity is evident in the appearance of significant side-band transitions that mimic the lower-energy excitonic structure. A comparison of quantum beating patterns obtained from analysis of the simulated 2DEV spectra shows that this technique can report on the mechanism of energy transfer, elucidating a means of experimentally determining the role of specific vibronic coupling mechanisms in such processes.
Collapse
Affiliation(s)
- Eric A Arsenault
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - Addison J Schile
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - David T Limmer
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - Graham R Fleming
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| |
Collapse
|
15
|
Liu ZY, Wei YC, Chou PT. Correlation between Kinetics and Thermodynamics for Excited-State Intramolecular Proton Transfer Reactions. J Phys Chem A 2021; 125:6611-6620. [PMID: 34308634 DOI: 10.1021/acs.jpca.1c04192] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Finding the relation between thermodynamics and kinetics for a reaction is of fundamental importance. Here, the thermodynamics and kinetics correlation of excited-state intramolecular proton transfer (ESIPT) was investigated by the TD-DFT calculation under the CAM-B3LYP/6-311+G** level. We choose the family 2-(2'-aminophyenyl)benzothiazole and its amino derivatives as paradigms, which all possess the NH-type intramolecular hydrogen bond (H-bond), and investigate the corresponding ESIPT reaction. The H-bond strength can be systematically tuned, so both activation energy ΔG‡ and free energy difference between proton transfer tautomer (T*, product) and normal species (N*, reactant) ΔGT*-N* can be varied. To minimize the environmental interference such as solvent external H-bond and polarity perturbation, a nonpolar solvent such as cyclohexane is chosen as a bath with a polarizable continuum solvation model for the calculation. As a result, the comprehensive computational approach reveals a linear relationship between ΔGT*-N* and ΔG‡, which can be expressed as ΔG‡ = ΔG0 + αΔGT*-N*. The fundamental insight is reminiscent of the Bell-Evans-Polanyi (BEP) principle where α represents the character of the position of the transition state along the proton motion coordinate. In other words, the more exergonic the ESIPT reaction is, the faster the proton transfer rate can be observed. To verify that such a correlation is not a sporadic event, another ESIPT family with an -OH proton, 1-hydroxy-11H-benzo[b]fluoren-11-one and its derivatives, was also investigated and proved to follow the BEP principle as well. Unlike the quantum mechanics description of proton transfer where either proton tunneling is dominant or solute/solvent is coupled in ESIPT, this work demonstrates that reaction kinetics and thermodynamics are strongly correlated within the same class of ESIPT molecules with an intrinsic barrier free from solvent perturbation, being faster with the more exergonic reaction.
Collapse
Affiliation(s)
- Zong-Ying Liu
- Department of Chemistry, National Taiwan University, Taipei, 10617 Taiwan, R.O.C
| | - Yu-Chen Wei
- Department of Chemistry, National Taiwan University, Taipei, 10617 Taiwan, R.O.C
| | - Pi-Tai Chou
- Department of Chemistry, National Taiwan University, Taipei, 10617 Taiwan, R.O.C
| |
Collapse
|
16
|
Arsenault EA, Bhattacharyya P, Yoneda Y, Fleming GR. Two-dimensional electronic-vibrational spectroscopy: Exploring the interplay of electrons and nuclei in excited state molecular dynamics. J Chem Phys 2021; 155:020901. [PMID: 34266264 DOI: 10.1063/5.0053042] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Two-dimensional electronic-vibrational spectroscopy (2DEVS) is an emerging spectroscopic technique which exploits two different frequency ranges for the excitation (visible) and detection (infrared) axes of a 2D spectrum. In contrast to degenerate 2D techniques, such as 2D electronic or 2D infrared spectroscopy, the spectral features of a 2DEV spectrum report cross correlations between fluctuating electronic and vibrational energy gaps rather than autocorrelations as in the degenerate spectroscopies. The center line slope of the spectral features reports on this cross correlation function directly and can reveal specific electronic-vibrational couplings and rapid changes in the electronic structure, for example. The involvement of the two types of transition moments, visible and infrared, makes 2DEVS very sensitive to electronic and vibronic mixing. 2DEV spectra also feature improved spectral resolution, making the method valuable for unraveling the highly congested spectra of molecular complexes. The unique features of 2DEVS are illustrated in this paper with specific examples and their origin described at an intuitive level with references to formal derivations provided. Although early in its development and far from fully explored, 2DEVS has already proven to be a valuable addition to the tool box of ultrafast nonlinear optical spectroscopy and is of promising potential in future efforts to explore the intricate connection between electronic and vibrational nuclear degrees of freedom in energy and charge transport applications.
Collapse
Affiliation(s)
- Eric A Arsenault
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | | | - Yusuke Yoneda
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - Graham R Fleming
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| |
Collapse
|
17
|
Guerra WD, Odella E, Urrutia MN, Liddell PA, Moore TA, Moore AL. Models to study photoinduced multiple proton coupled electron transfer processes. J PORPHYR PHTHALOCYA 2021. [DOI: 10.1142/s1088424621500577] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
In water-oxidizing photosynthetic organisms, excitation of the reaction-center chlorophylls (P680) triggers a cascade of electron and proton transfer reactions that establish charge separation across the membrane and proton-motive force. An early oxidation step in this process involves proton-coupled electron transfer (PCET) via a tyrosine-histidine redox relay (Yz-H190). Herein, we report the synthesis and structural characterization of two isomeric dyads designed to model this PCET process. Both are based on the same high potential fluorinated porphyrin (model for P680), linked to isomeric pyridylbenzimidazole-phenols (models for Yz-H190). The two isomeric dyads have different hydrogen bond frameworks, which is expected to change the PCET photooxidation mechanism. In these dyads, 1H NMR evidence indicates that in one dyad the hydrogen bond network would support a Grotthuss-type proton transfer process, whereas in the other the hydrogen bond network is interrupted. Photoinduced one-electron, two-proton transfer is expected to occur in the fully hydrogen-bonded dyad upon oxidation of the phenol by the excited state of the porphyrin. In contrast for the isomer with the interrupted hydrogen bond network, an ultrafast photoinduced one-electron one-proton transfer process is anticipated, followed by a much slower proton transfer to the terminal proton acceptor. Understanding the nature of photoinduced PCET mechanisms in these biomimetic models will provide insights into the design of future generations of artificial constructs involved in energy conversion schemes.
Collapse
Affiliation(s)
- Walter D. Guerra
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287-1604, United States
| | - Emmanuel Odella
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287-1604, United States
| | - María N. Urrutia
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287-1604, United States
| | - Paul A. Liddell
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287-1604, United States
| | - Thomas A. Moore
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287-1604, United States
| | - Ana L. Moore
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287-1604, United States
| |
Collapse
|
18
|
Rybicka-Jasińska K, Derr JB, Vullev VI. What defines biomimetic and bioinspired science and engineering? PURE APPL CHEM 2021. [DOI: 10.1515/pac-2021-0323] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Abstract
Biomimicry, biomimesis and bioinspiration define distinctly different approaches for deepening the understanding of how living systems work and employing this knowledge to meet pressing demands in engineering. Biomimicry involves shear imitation of biological structures that most often do not reproduce the functionality that they have while in the living organisms. Biomimesis aims at reproduction of biological structure-function relationships and advances our knowledge of how different components of complex living systems work. Bioinspiration employs this knowledge in abiotic manners that are optimal for targeted applications. This article introduces and reviews these concepts in a global historic perspective. Representative examples from charge-transfer science and solar-energy engineering illustrate the evolution from biomimetic to bioinspired approaches and show their importance. Bioinspired molecular electrets, aiming at exploration of dipole effects on charge transfer, demonstrate the pintail impacts of biological inspiration that reach beyond its high utilitarian values. The abiotic character of bioinspiration opens doors for the emergence of unprecedented properties and phenomena, beyond what nature can offer.
Collapse
Affiliation(s)
| | - James B. Derr
- Department of Biochemistry , University of California , Riverside , CA , 92521 , USA
| | - Valentine I. Vullev
- Department of Biochemistry , University of California , Riverside , CA , 92521 , USA
- Department of Bioengineering , University of California , Riverside , CA , 92521 , USA
- Department of Chemistry , University of California , Riverside , CA , 92521 , USA
- Materials Science and Engineering Program , University of California , Riverside , CA , 92521 , USA
| |
Collapse
|