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For: Cho Y, An HJ, Kim T, Lee C, Lee NK. Mechanism of Cyanine5 to Cyanine3 Photoconversion and Its Application for High-Density Single-Particle Tracking in a Living Cell. J Am Chem Soc 2021;143:14125-14135. [PMID: 34432445 DOI: 10.1021/jacs.1c04178] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Number Cited by Other Article(s)
1
Liu J, Zhang X, Zhao B, Ling H, Li Y, Sun K, Chen S, Zhang Y, Zhai T, Zhang Y, Li F, Liu Q. In Situ Monitoring of Membrane Protein Dynamics Using High-Throughput Red-Light-Activated Single-Molecule Tracking. ACS NANO 2025;19:13466-13478. [PMID: 40153256 DOI: 10.1021/acsnano.5c03182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/30/2025]
2
Ritz JM, Khakimzhan A, Dalluge JJ, Noireaux V, Puchner EM. Red Light Mediated Photoconversion of Silicon Rhodamines to Oxygen Rhodamines for Single-Molecule Microscopy. J Am Chem Soc 2025;147:7588-7596. [PMID: 39985805 DOI: 10.1021/jacs.4c16907] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2025]
3
Kim DH, Triet HM, Lee SH, Jazani S, Jang S, Abedi SAA, Liu X, Seo J, Ha T, Chang YT, Ryu SH. Super-photostable organic dye for long-term live-cell single-protein imaging. Nat Methods 2025;22:550-558. [PMID: 39815105 DOI: 10.1038/s41592-024-02584-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2024] [Accepted: 11/26/2024] [Indexed: 01/18/2025]
4
Riendeau JM, Gillette AA, Guzman EC, Cruz MC, Kralovec A, Udgata S, Schmitz A, Deming DA, Cimini BA, Skala MC. Cellpose as a reliable method for single-cell segmentation of autofluorescence microscopy images. Sci Rep 2025;15:5548. [PMID: 39952935 PMCID: PMC11828867 DOI: 10.1038/s41598-024-82639-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2024] [Accepted: 12/06/2024] [Indexed: 02/17/2025]  Open
5
Lee SH, Lee TJ, Sarkar S, Cho H, Nhu QPN, Chang YT. Atom-Efficient Synthesis of Trimethine Cyanines Using Formaldehyde as a Single-Carbon Source. Angew Chem Int Ed Engl 2025;64:e202413121. [PMID: 39291296 DOI: 10.1002/anie.202413121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2024] [Revised: 09/11/2024] [Accepted: 09/13/2024] [Indexed: 09/19/2024]
6
Gulyak EL, Brylev VA, Zhitlov MY, Komarova OA, Ustinov AV, Sapozhnikova KA, Alferova VA, Korshun VA, Gvozdev DA. Indocarbocyanine-Indodicarbocyanine (sCy3-sCy5) Absorptive Interactions in Conjugates and DNA Duplexes. Molecules 2024;30:57. [PMID: 39795114 PMCID: PMC11721635 DOI: 10.3390/molecules30010057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2024] [Revised: 12/23/2024] [Accepted: 12/25/2024] [Indexed: 01/13/2025]  Open
7
Xuan J, Yu J, Huang C. Research Progress of Cyanine-Based Near-Infrared Fluorescent Probes for Biological Application. Chembiochem 2024;25:e202400467. [PMID: 39039605 DOI: 10.1002/cbic.202400467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Revised: 07/22/2024] [Accepted: 07/22/2024] [Indexed: 07/24/2024]
8
Kozyreva ZV, Demina PA, Gusliakova OI, Sukhorukov GB, Sindeeva OA. Exchange of free and capsule conjugated cyanine dyes between cells. J Mater Chem B 2024;12:12672-12683. [PMID: 39508506 DOI: 10.1039/d4tb01874e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2024]
9
Bocu R. Dynamic Monitoring of Time-Dependent Evolution of Biomolecules Using Quantum Dots-Based Biosensors Assemblies. BIOSENSORS 2024;14:380. [PMID: 39194609 DOI: 10.3390/bios14080380] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2024] [Revised: 07/31/2024] [Accepted: 08/06/2024] [Indexed: 08/29/2024]
10
Okoročenkova J, Filgas J, Khan NM, Slavíček P, Klán P. Thermal Truncation of Heptamethine Cyanine Dyes. J Am Chem Soc 2024;146:19768-19781. [PMID: 38995720 PMCID: PMC11273355 DOI: 10.1021/jacs.4c02116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2024] [Revised: 06/24/2024] [Accepted: 06/25/2024] [Indexed: 07/14/2024]
11
Li Y, Bai X, Yang D. Development and Application of Cationic Nile Blue Probes in Live-Cell Super-Resolution Imaging and Specific Targeting to Mitochondria. ACS CENTRAL SCIENCE 2024;10:1221-1230. [PMID: 38947205 PMCID: PMC11212141 DOI: 10.1021/acscentsci.4c00073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 04/28/2024] [Accepted: 05/09/2024] [Indexed: 07/02/2024]
12
Saladin L, Breton V, Le Berruyer V, Nazac P, Lequeu T, Didier P, Danglot L, Collot M. Targeted Photoconvertible BODIPYs Based on Directed Photooxidation-Induced Conversion for Applications in Photoconversion and Live Super-Resolution Imaging. J Am Chem Soc 2024;146:17456-17473. [PMID: 38861358 DOI: 10.1021/jacs.4c05231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2024]
13
Riendeau JM, Gillette AA, Guzman EC, Cruz MC, Kralovec A, Udgata S, Schmitz A, Deming DA, Cimini BA, Skala MC. Cellpose as a reliable method for single-cell segmentation of autofluorescence microscopy images. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.07.597994. [PMID: 38915614 PMCID: PMC11195115 DOI: 10.1101/2024.06.07.597994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/26/2024]
14
Li H, Wang J, Jiao L, Hao E. BODIPY-based photocages: rational design and their biomedical application. Chem Commun (Camb) 2024;60:5770-5789. [PMID: 38752310 DOI: 10.1039/d4cc01412j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/31/2024]
15
Zhang Y, Ling J, Liu T, Chen Z. Lumos maxima - How robust fluorophores resist photobleaching? Curr Opin Chem Biol 2024;79:102439. [PMID: 38432145 DOI: 10.1016/j.cbpa.2024.102439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 02/13/2024] [Accepted: 02/13/2024] [Indexed: 03/05/2024]
16
Lapoot L, Wang C, Matikonda SS, Schnermann MJ, Greer A. Bluer Phototruncation: Retro-Diels-Alder of Heptamethine Cyanine to Trimethine Cyanine through an Allene Hydroperoxide Intermediate. J Org Chem 2023. [PMID: 38051763 DOI: 10.1021/acs.joc.3c02245] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
17
Zhang Z, Gao C, Lu Z, Xie X, You J, Li Z. Sunlight-directed fluorophore-switch in photosynthesis of cyanine subcellular organelle markers for bio-imaging. Biosens Bioelectron 2023;237:115485. [PMID: 37348191 DOI: 10.1016/j.bios.2023.115485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Revised: 06/14/2023] [Accepted: 06/15/2023] [Indexed: 06/24/2023]
18
Zhang Y, Zheng Y, Tomassini A, Singh AK, Raymo FM. Photoactivatable Fluorophores for Bioimaging Applications. ACS APPLIED OPTICAL MATERIALS 2023;1:640-651. [PMID: 37601830 PMCID: PMC10437147 DOI: 10.1021/acsaom.3c00025] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/22/2023]
19
Zhang Y, Zheng Y, Tomassini A, Singh AK, Raymo FM. Photoactivatable BODIPYs for Live-Cell PALM. Molecules 2023;28:molecules28062447. [PMID: 36985424 PMCID: PMC10057988 DOI: 10.3390/molecules28062447] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Revised: 03/03/2023] [Accepted: 03/04/2023] [Indexed: 03/10/2023]  Open
20
Saladin L, Dal Pra O, Klymchenko AS, Didier P, Collot M. Tuning Directed Photooxidation-Induced Conversion of Pyrrole-Based Styryl Coumarin Dual-Color Photoconverters. Chemistry 2023;29:e202203933. [PMID: 36719328 DOI: 10.1002/chem.202203933] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Revised: 01/31/2023] [Accepted: 01/31/2023] [Indexed: 02/01/2023]
21
Saladin L, Breton V, Dal Pra O, Klymchenko AS, Danglot L, Didier P, Collot M. Dual-Color Photoconvertible Fluorescent Probes Based on Directed Photooxidation Induced Conversion for Bioimaging. Angew Chem Int Ed Engl 2023;62:e202215085. [PMID: 36420823 PMCID: PMC10107923 DOI: 10.1002/anie.202215085] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 11/18/2022] [Accepted: 11/23/2022] [Indexed: 11/25/2022]
22
Kikuchi K, Adair LD, Lin J, New EJ, Kaur A. Photochemical Mechanisms of Fluorophores Employed in Single-Molecule Localization Microscopy. Angew Chem Int Ed Engl 2023;62:e202204745. [PMID: 36177530 PMCID: PMC10100239 DOI: 10.1002/anie.202204745] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Indexed: 02/02/2023]
23
Gong Q, Zhang X, Li W, Guo X, Wu Q, Yu C, Jiao L, Xiao Y, Hao E. Long-Wavelength Photoconvertible Dimeric BODIPYs for Super-Resolution Single-Molecule Localization Imaging in Near-Infrared Emission. J Am Chem Soc 2022;144:21992-21999. [PMID: 36414278 DOI: 10.1021/jacs.2c08947] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
24
Yoo G, An HJ, Yeou S, Lee NK. α-Synuclein Disrupts Vesicle Fusion by Two Mutant-Specific Mechanisms. Mol Cells 2022;45:806-819. [PMID: 36380732 PMCID: PMC9676983 DOI: 10.14348/molcells.2022.0102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Revised: 07/26/2022] [Accepted: 07/28/2022] [Indexed: 11/17/2022]  Open
25
Broitman-Maduro G, Sun S, Kikuchi T, Maduro MF. The GATA factor ELT-3 specifies endoderm in Caenorhabditis angaria in an ancestral gene network. Development 2022;149:277064. [PMID: 36196618 PMCID: PMC9720673 DOI: 10.1242/dev.200984] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2022] [Accepted: 09/20/2022] [Indexed: 11/07/2022]
26
Heng H, Song G, Cai X, Sun J, Du K, Zhang X, Wang X, Feng F, Wang S. Intrinsic Mitochondrial Reactive Oxygen Species (ROS) Activate the In Situ Synthesis of Trimethine Cyanines in Cancer Cells. Angew Chem Int Ed Engl 2022;61:e202203444. [DOI: 10.1002/anie.202203444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Indexed: 11/10/2022]
27
Yin D, Yao C, Chen Y, He Z, Yu P, Sun X, Wang S, Zhang F. HClO-Activated Near-Infrared Fluorogenic Aza-BODIPY-Bisferrocene Triad with High Turn-on Ratio for In Vivo Biosensing. Adv Healthc Mater 2022;11:e2201139. [PMID: 35815541 DOI: 10.1002/adhm.202201139] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Indexed: 01/27/2023]
28
Heng H, Song G, Cai X, Sun J, Du K, Zhang X, Wang X, Feng F, Wang S. Intrinsic‐Mitochondrial‐ROS‐Activated In Situ Synthesis of Trimethine Cyanines in Cancer Cells. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202203444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
29
Li Y, Ma T, Jiang H, Li W, Tian D, Zhu J, Li Z. Anionic Cyanine J‐Type Aggregate Nanoparticles with Enhanced Photosensitization for Mitochondria‐Targeting Tumor Phototherapy. Angew Chem Int Ed Engl 2022;61:e202203093. [DOI: 10.1002/anie.202203093] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2022] [Indexed: 12/18/2022]
30
Li Y, Ma T, Jiang H, Li W, Tian D, Zhu J, Li Z. Anionic Cyanine J‐type Aggregate Nanoparticles with Enhanced Photosensitization for Mitochondria‐targeting Tumor Phototherapy. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202203093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
31
Cheng Y, Borum RM, Clark AE, Jin Z, Moore C, Fajtová P, O'Donoghue AJ, Carlin AF, Jokerst JV. A Dual-Color Fluorescent Probe Allows Simultaneous Imaging of Main and Papain-like Proteases of SARS-CoV-2-Infected Cells for Accurate Detection and Rapid Inhibitor Screening. Angew Chem Int Ed Engl 2022;61:e202113617. [PMID: 34889013 PMCID: PMC8854376 DOI: 10.1002/anie.202113617] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Indexed: 11/15/2022]
32
Cheng Y, Borum RM, Clark AE, Jin Z, Moore C, Fajtová P, O'Donoghue AJ, Carlin AF, Jokerst JV. A Dual‐Color Fluorescent Probe Allows Simultaneous Imaging of Main and Papain‐like Proteases of SARS‐CoV‐2‐Infected Cells for Accurate Detection and Rapid Inhibitor Screening. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202113617] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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