Site-Selection in Single-Molecule Junction for Highly Reproducible Molecular Electronics

Massive acceleration of SN2 reaction using the oriented external electric field

Nucleophilic substitution is one of the most fundamental chemical reactions, and the pursuit of high reaction rates of the reaction is one of the ultimate goals in catalytic and organic chemistry. The reaction barrier of the nucleophilic substitution originates from the highly polar nature of the transition state that can be stabilized under the electric field created by the solvent environment. However, the intensity of the induced solvent-electric field is relatively small due to the random orientation of solvent molecules, which hinders the catalytic effects and restricts the reaction rates. This work shows that oriented external electric fields applied within a confined nanogap between two nanoscopic tips could accelerate the Menshutkin reaction by more than four orders of magnitude (over 39 000 times). The theoretical calculations reveal that the electric field inside the nanogap reduces the energy barrier to increase the reaction rate. Our work suggests the great potential of electrostatic catalysis for green synthesis in the future.

Organometallics in molecular junctions: conductance, functions, and reactions

Molecular junctions, which involve sandwiching molecular structures between electrodes, play a crucial role in molecular electronics. Recent advances in this field have revealed the vital role of organometallic chemistry in the investigation of molecular junctions, which has added to their well-known contributions to catalysis and materials chemistry. This review summarizes the recent examples of organometallic chemistry applications in molecular junctions, which can be categorized into three types, i.e., class I encompassing molecular junctions with bridging organometallic complexes, class II involving molecular junctions with covalent and noncovalent metal electrode-carbon bonds, and class III comprising organometallic reactions within molecular junctions.

Evolution of Single-Molecule Electronic Interfaces

Single-molecule electronics can fabricate single-molecule devices via the construction of molecule-electrode interfaces and also provide a unique tool to investigate single-molecule scale physicochemical processes at these interfaces. To investigate single-molecule electronic devices with desired functionalities, an understanding of the interface evolution processes in single-molecule devices is essential. In this review, we focus on the evolution of molecule-electrode interface properties, including the background of interface evolution in single-molecule electronics, the construction of different types of single-molecule interfaces, and the regulation methods. Finally, we discuss the perspective of future characterization techniques and applications for single-molecule electronic interfaces.

Solvent-Mediated Modulation of the Au-S Bond in Dithiol Molecular Junctions

Gold-dithiol molecular junctions have been studied both experimentally and theoretically. However, the nature of the gold-thiolate bond as it relates to the solvent has seldom been investigated. It is known that solvents can impact the electronic structure of single-molecule junctions, but the correlation between the solvent and dithiol-linked single-molecule junction conductance is not well understood. We study molecular junctions formed with thiol-terminated phenylenes from both 1-chloronaphthalene and 1-bromonaphthalene solutions. We find that the most probable conductance and the distribution of conductances are both affected by the solvent. First-principles calculations show that junction conductance depends on the binding configurations (adatom, atop, and bridge) of the thiolate on the Au surface, as has been shown previously. More importantly, we find that brominated solvents can restrict the binding of thiols to specific Au sites. This mechanism offers new insight into the effects of the solvent environment on covalent bonding in molecular junctions.

Detection of pesticide residues on flexible and transparent fluorinated polyimide film based on surface-enhanced Raman spectroscopy technology

BACKGROUND

Excessive pesticide residues will seriously endanger human health. The complexity and lag of the current popular analytical methods hinder the timeliness of food safety analysis. Surface-enhanced Raman scattering (SERS) was an ultra-sensitive vibration spectroscopy technology with the advantages of less time cost, non-destructive and semi-quantitative detection, which has attracted much attention in the rapid field detection of pesticide residue. It was clear that we need an efficient and convenient substrate for pesticide residue detection based on SRES technology, which needs to be portable, flexible, transparent and easy to detect irregular object surfaces.

RESULTS

A novel SERS sensor was designed to detect single and multi-component pesticide residues on irregular fruit and vegetable surfaces by in-situ growth of silver nanoparticles on a flexible and transparent fluorinated polyimide (FPI) substrate. Among them, Ag NPs were synthesized by liquid phase reduction method (AgNO3-PVP and NaBH4). The results showed that the detection limit of 1-4 BDT was down to 10-10 mol L-1, the enhancement factor (EF) was up to 1.57 × 107, and relative standard deviation (RSD) was 7.49 %. By this method, tricyclazole solution at a concentration of 0.01 mg L-1 was still detectable by the FPI@Ag SERS substrate. The linear quantification was achieved in the range from 100 mg L-1 to 0.01 mg L-1. Two mixed pesticides, tricyclazole and imazalil, were also successfully distinguished.

SIGNIFICANCE

This represents the formation of a flexible, foldable and transparent substrate for rapid on-site detection. Results can be obtained in <5 min by attaching the substrate to the substance to be tested. And the SERS substrate prepared with high sensitivity, stability, portable and convenient analysis, which provided new ideas for efficient and rapid household food safety detection.

Single-molecule photoelectron tunnelling spectroscopy

Experimental mapping of transmission is essential for understanding and controlling charge transport through molecular devices and materials. Here we developed a single-molecule photoelectron tunnelling spectroscopy approach for mapping transmission beyond the HOMO-LUMO gap of the single diketopyrrolopyrrole molecule junction using an ultrafast-laser combined scanning tunnelling microscope-based break junction set-up at room temperature. Two resonant transport channels of ultrafast photocurrent are found by our photoelectron tunnelling spectroscopy, ranging from 1.31 eV to 1.77 eV, consistent with the LUMO + 1 and LUMO + 2 in the transmission spectrum obtained by density functional theory calculations. Moreover, we observed the modulation of resonant peaks by varying bias voltages, which demonstrates the ability to quantitatively characterize the effect of the electric field on frontier molecular orbitals. Our single-molecule photoelectron tunnelling spectroscopy offers an avenue that allows us to explore the nature of energy-dependent charge transport through single-molecule junctions.

Intermolecular and Electrode-Molecule Bonding in a Single Dimer Junction of Naphthalenethiol as Revealed by Surface-Enhanced Raman Scattering Combined with Transport Measurements

Electron transport through noncovalent interaction is of fundamental and practical importance in nanomaterials and nanodevices. Recent single-molecule studies employing single-molecule junctions have revealed unique electron transport properties through noncovalent interactions, especially those through a π-π interaction. However, the relationship between the junction structure and electron transport remains elusive due to the insufficient knowledge of geometric structures. In this article, we employ surface-enhanced Raman scattering (SERS) synchronized with current-voltage (I-V) measurements to characterize the junction structure, together with the transport properties, of a single dimer and monomer junction of naphthalenethiol, the former of which was formed by the intermolecular π-π interaction. The correlation analysis of the vibrational energy and electrical conductance enables identifying the intermolecular and molecule-electrode interactions in these molecular junctions and, consequently, addressing the transport properties exclusively associated with the π-π interaction. In addition, the analysis achieved discrimination of the interaction between the NT molecule and the Au electrode of the junction, i.e., Au-π interactions through-π coupling and though-space coupling. The power density spectra support the noncovalent character at the interfaces in the molecular junctions. These results demonstrate that the simultaneous SERS and I-V technique provides a unique means for the structural and electrical investigation of noncovalent interactions.

Effects of Inorganic Substitutions and Different Metal Electrode Materials on Electronic Transport Properties of Organic Molecular Devices

Incorporating inorganic components into organic molecular devices offers one novel alternative to address challenges existing in the fabrication and integration of nanoscale devices. In this study, using a theoretical method of density functional theory combined with the nonequilibrium Green's function, a series of benzene-based molecules with group III and V substitutions, including borazine molecule and X_nB_3-nN₃H₆ (X = Al or Ga, n = 1-3) molecules/clusters, are constructed and investigated. An analysis of electronic structures reveals that the introduction of inorganic components effectively reduces the energy gap between the highest occupied molecular orbital and the lowest unoccupied molecular orbital, albeit at the cost of reduced aromaticity in these molecules/clusters. Simulated electronic transport characteristics demonstrate that X_nB_3-nN₃H₆ molecules/clusters coupled between metal electrodes exhibit lower conductance compared to prototypical benzene molecule. Additionally, the choice of metal electrode materials significantly impacts the electronic transport properties, with platinum electrode devices displaying distinct behavior compared to silver, copper, and gold electrode devices. This distinction arises from the amount of transferred charge, which modulates the alignment between molecular orbitals and the Fermi level of the metal electrodes by shifting the molecular orbitals in energy. These findings provide valuable theoretical insights for the future design of molecular devices incorporating inorganic substitutions.

Molecular Electronics: Creating and Bridging Molecular Junctions and Promoting Its Commercialization

Molecular electronics is driven by the dream of expanding Moore's law to the molecular level for next-generation electronics through incorporating individual or ensemble molecules into electronic circuits. For nearly 50 years, numerous efforts have been made to explore the intrinsic properties of molecules and develop diverse fascinating molecular electronic devices with the desired functionalities. The flourishing of molecular electronics is inseparable from the development of various elegant methodologies for creating nanogap electrodes and bridging the nanogap with molecules. This review first focuses on the techniques for making lateral and vertical nanogap electrodes by breaking, narrowing, and fixed modes, and highlights their capabilities, applications, merits, and shortcomings. After summarizing the approaches of growing single molecules or molecular layers on the electrodes, the methods of constructing a complete molecular circuit are comprehensively grouped into three categories: 1) directly bridging one-molecule-electrode component with another electrode, 2) physically bridging two-molecule-electrode components, and 3) chemically bridging two-molecule-electrode components. Finally, the current state of molecular circuit integration and commercialization is discussed and perspectives are provided, hoping to encourage the community to accelerate the realization of fully scalable molecular electronics for a new era of integrated microsystems and applications.

Playing catch and release with single molecules: mechanistic insights into plasmon-controlled nanogaps

Single-molecule (SM) detection is essential for investigating processes at the molecular level. Nanogap-based detection approaches have proven to be highly accurate SM capture and detection platforms in the last decade. Unfortunately, these approaches face several inherent drawbacks, such as short detection times and the effects of Brownian motion, that can hinder molecular capture. Nanogap-based SM detection approaches have been successfully coupled to optical-based setups to exploit nearfield-assisted trapping to overcome these drawbacks and thus improve SM capture and detection. Here we present the first mechanistic study of nearfield effects on SM capture and release in nanogaps, using unsupervised machine learning methods based on hidden Markov models. We show that the nearfield strength can manipulate the kinetics of the SM capture and release processes. With increasing field strength, the rate constant of the capture kinetics increase while the release kinetics decrease, favouring the former over the latter. As a result, the SM capture state is more likely and more stable than the release state above a specific threshold nearfild strength. We have also estimated the decrease in the capture free-energy profile and the increase in the release profiles to be around 5 kJ mol^-1 for the laser powers employed, ranging from laser-OFF conditions to 11 mW μm^-2. We envisage that our findings can be combined with the electrocatalytic capabilities of the (nearfield) nanogap to develop next-generation molecular nanoreactors. This approach will open the door to highly efficient SM catalysis with precise extended monitoring timescales facilitated through the longer residence times of the reactant trapped inside the nanogap.

Toward Quantitative Surface-Enhanced Raman Scattering with Plasmonic Nanoparticles: Multiscale View on Heterogeneities in Particle Morphology, Surface Modification, Interface, and Analytical Protocols

Surface-enhanced Raman scattering (SERS) provides significantly enhanced Raman scattering signals from molecules adsorbed on plasmonic nanostructures, as well as the molecules' vibrational fingerprints. Plasmonic nanoparticle systems are particularly powerful for SERS substrates as they provide a wide range of structural features and plasmonic couplings to boost the enhancement, often up to >10⁸-10¹⁰. Nevertheless, nanoparticle-based SERS is not widely utilized as a means for reliable quantitative measurement of molecules largely due to limited controllability, uniformity, and scalability of plasmonic nanoparticles, poor molecular modification chemistry, and a lack of widely used analytical protocols for SERS. Furthermore, multiscale issues with plasmonic nanoparticle systems that range from atomic and molecular scales to assembled nanostructure scale are difficult to simultaneously control, analyze, and address. In this perspective, we introduce and discuss the design principles and key issues in preparing SERS nanoparticle substrates and the recent studies on the uniform and controllable synthesis and newly emerging machine learning-based analysis of plasmonic nanoparticle systems for quantitative SERS. Specifically, the multiscale point of view with plasmonic nanoparticle systems toward quantitative SERS is provided throughout this perspective. Furthermore, issues with correctly estimating and comparing SERS enhancement factors are discussed, and newly emerging statistical and artificial intelligence approaches for analyzing complex SERS systems are introduced and scrutinized to address challenges that cannot be fully resolved through synthetic improvements.

Single-Molecule Surface-Enhanced Raman Spectroscopy

Single-molecule surface-enhanced Raman spectroscopy (SM-SERS) has the potential to detect single molecules in a non-invasive, label-free manner with high-throughput. SM-SERS can detect chemical information of single molecules without statistical averaging and has wide application in chemical analysis, nanoelectronics, biochemical sensing, etc. Recently, a series of unprecedented advances have been realized in science and application by SM-SERS, which has attracted the interest of various fields. In this review, we first elucidate the key concepts of SM-SERS, including enhancement factor (EF), spectral fluctuation, and experimental evidence of single-molecule events. Next, we systematically discuss advanced implementations of SM-SERS, including substrates with ultra-high EF and reproducibility, strategies to improve the probability of molecules being localized in hotspots, and nonmetallic and hybrid substrates. Then, several examples for the application of SM-SERS are proposed, including catalysis, nanoelectronics, and sensing. Finally, we summarize the challenges and future of SM-SERS. We hope this literature review will inspire the interest of researchers in more fields.

Tuning the binding configurations of single-molecule junctions by molecular co-assembly

Significant variability issues in metal-molecule contacts, such as adsorption geometry, lead to characteristic variability in the electrical responses of individual molecules. Herein, co-assembling 1-ethylimidazole (EIM) on Au(111) has been shown to be a feasible and effective strategy for tuning the binding configurations of pyridine-linked molecular junctions in the most common aqueous environments and atmospheric environments. The single-molecule conductance measurements clearly show a transition from multiple conductance peaks to a single conductance peak with increasing EIM concentration. Raman spectroscopy and DFT calculations suggest that the thermodynamically favorable EIM adsorbate results in the vertical orientation of the bipyridine.

Principal Component Analysis of Surface-Enhanced Raman Scattering Spectra Revealing Isomer-Dependent Electron Transport in Spiropyran Molecular Junctions: Implications for Nanoscale Molecular Electronics

The characterization of single-molecule structures could provide significant insights into the operation mechanisms of functional devices. Structural transformation via isomerization has been extensively employed to implement device functionalities. Although single-molecule identification has recently been achieved using near-field spectroscopy, discrimination between isomeric forms remains challenging. Further, the structure-function relationship at the single-molecule scale remains unclear. Herein, we report the observation of the isomerization of spiropyran in a single-molecule junction (SMJ) using simultaneous surface-enhanced Raman scattering (SERS) and conductance measurements. SERS spectra were used to discriminate between isomers based on characteristic peaks. Moreover, conductance measurements, in conjunction with the principal component analysis of the SERS spectra, clearly showed the isomeric effect on the conductance of the SMJ.

Surface-Enhanced Raman Scattering Stimulated by Strong Metal-Molecule Interactions in a C60 Single-Molecule Junction

Specifying the geometric and electronic structures of a metal-molecule interface at the single-molecule level is crucial for the improvement of organic electronics. A single-molecule junction (SMJ) can be used to investigate interfaces because it can be regarded as an elementary unit of the interface structure. Although considerable efforts have been made to this end, the detection of structural changes in SMJs associated with metal-molecule interactions remains challenging. In this study, we detected the surface-enhanced Raman scattering (SERS) signal originating from the metal-molecule interaction change induced by a local structural change in a C₆₀ SMJ. This junction has attracted wide attention owing to its unique electronic and vibronic properties. We fabricated a C₆₀ SMJ using a lithographically fabricated Au electrode and measured the SERS spectra along with the current-voltage (I-V) response. By continuous measurement of SERS for the C₆₀ SMJ, we obtained SERS spectra dependent on the local structural change. The analysis of the I-V response revealed that the vibration energy shift originates from the change in the local structure for different Au-C₆₀ interactions. Based on the discrimination of the states in accordance with the Au-C₆₀ interaction, we found that the probability of SERS for geometry with a large Au-C₆₀ interaction was enhanced.

Water Splitting Induced by Visible Light at a Copper-Based Single-Molecule Junction

Water splitting is an essential process for converting light energy into easily storable energy in the form of hydrogen. As environmentally preferable catalysts, Cu-based materials have attracted attention as water-splitting catalysts. To enhance the efficiency of water splitting, a reaction process should be developed. Single-molecule junctions (SMJs) are attractive structures for developing these reactions because the molecule electronic state is significantly modulated, and characteristic electromagnetic effects can be expected. Here, water splitting is induced at Cu-based SMJ and the produced hydrogen is characterized at a single-molecule scale by employing electron transport measurements. After visible light irradiation, the conductance states originate from Cu/hydrogen molecule/Cu junctions, while before irradiation, only Cu/water molecule/Cu junctions were observed. The vibration spectra obtained from inelastic electron tunneling spectroscopy combined with the first-principles calculations reveal that the water molecule trapped between the Cu electrodes is decomposed and that hydrogen is produced. Time-dependent and wavelength-dependent measurements show that localized-surface plasmon decomposes the water molecule in the vicinity of the junction. These findings indicate the potential ability of Cu-based materials for photocatalysis.

Application of Micro/Nanofabrication Techniques to On-Chip Molecular Electronics

Molecular electronics is a promising subject to overcome the size limitation of silicon-based electronic devices. In the past decades, various micro/nanofabrication techniques have been developed for constructing molecular junctions, and a number of breakthroughs are made in the characterizations and applications of the single-molecule device. The history and progress are reviewed in this article, laying emphasis on the recent works on the combination of micro/nanofabrication techniques with other techniques such as electrochemical deposition and surface-enhanced Raman spectroscopy (SERS). Some prototypical single-molecule devices such as molecular transistors are presented. Finally, the challenges and prospects in the fabrication of single-molecule devices are discussed.

Tolerance to Stretching in Thiol-Terminated Single-Molecule Junctions Characterized by Surface-Enhanced Raman Scattering

We investigated the change in the metal-molecule interaction in a 1,4-benzenedithiol (BDT) single-molecule junction using a combination of surface-enhanced Raman scattering spectra and current-voltage curves. During the stretching process, the conductance of the junction systematically decreased, accompanied by an increase in the vibrational energy of the CC stretching mode. By analyzing the current-voltage curves and Raman spectra, we found that the interaction between the π orbital of BDT and the electronic states of Au was diminished by the orientation change of BDT during the stretching process. A comparison with a 4,4'-bipyridine single-molecule junction revealed that the reduction of coupling of the Au-S contacts was smaller than that of Au-pyridine contacts. Therefore, the electronic states originating from the contact geometry are responsible for the tolerance to the stretching of thiol-terminated molecular junctions.

Identifying the molecular adsorption site of a single molecule junction through combined Raman and conductance studies

Single-molecule junctions are ideal test beds for investigating the fundamentals of charge transport at the nanoscale. Conducting properties are strongly dependent on the metal-molecule interface geometry, which, however, is very poorly characterized due to numerous experimental challenges. We report on a new methodology for characterizing the adsorption site of single-molecule junctions through the combination of surface enhanced Raman scattering (SERS), current-voltage (I-V) curve measurements, and density functional theory simulations. This new methodology discriminates between three different adsorption sites for benzenedithiol and aminobenzenethiol junctions, which cannot be identified by solo measurements of either SERS or I-V curves. Using this methodology, we determine the interface geometry of these two prototypical molecules at the junction and its time evolution. By modulating the applied voltage, we can change and monitor the distribution of adsorption sites at the junction.

Evolution of local conductance pathways in a single-molecule junction studied using the three-dimensional dynamic probe method

Understanding of the dynamics of the bonding states of molecules with electrodes while the molecular conformation is changed is particularly important for elucidating the details of electrochemical devices as well as molecular devices in which the reaction dynamics of the electrodes and molecules plays an important role, such as in fuel cells, catalysis and bioelectrochemical devices. However, it has been difficult to make measurements when the distance between counter electrodes is short, namely, the molecule is raised from a lying form, almost parallel and close to the electrodes, toward a standing form and vice versa. We previously have developed a method called the three-dimensional (3D) dynamic probe method, which enables conductance measurement while the conformation of a single-molecule junction is precisely controlled by scanning tunneling microscopy (STM) techniques. Here, by combining this method with density functional theory (DFT) calculations, it has become possible to simultaneously consider the effects of the dynamics of molecular structures and the bonding states at the electrodes on the local transmission pathways, local-bond contributions to conductance. Here, by performing an analysis on 1,4-benzenediamine (BDA) and 1,4-benzenedithiol (BDT) single molecule junctions, we have observed, for the first time, the effect of a change in the molecular conformations and bonding states on the local transmission pathways for a short Au electrode distance condition.

Enabling single qubit addressability in a molecular semiconductor comprising gold-supported organic radicals

A bis(dithiolene)gold complex is presented as a model for an organic molecular electron spin qubit attached to a metallic surface that acts as a conduit to electrically address the qubit. A two-membered electron transfer series is developed of the formula [AuIII(adt)2]1-/0, where adt is a redox-active dithiolene ligand that is sequentially oxidized as the series is traversed while the central metal ion remains AuIII and steadfastly square planar. One-electron oxidation of diamagnetic [AuIII(adt)2]1- (1) produces an S = 1/2 charge-neutral complex, [AuIII(adt2 3-˙)] (2) which is spectroscopically and theoretically characterized with a near negligible Au contribution to the ground state. A phase memory time (T M) of 21 μs is recorded in 4 : 1 CS2/CCl4 at 10 K, which is the longest ever reported for a coordination complex possessing a third-row transition metal ion. With increasing temperature, T M dramatically decreases becoming unmeasurable above 80 K as a consequence of the diminishing spin-lattice (T 1) relaxation time fueled by spin-orbit coupling. These relaxation times are 1-2 orders of magnitude shorter for the solid dilution of 2 in isoelectronic [Ni(adt)2] because this material is a molecular semiconductor. Although the conducting properties of this material provide efficient pathways to dissipate the energy through the lattice, it can also be used to electrically address the paramagnetic dopant by tapping into the mild reduction potential to switch magnetism "on" and "off" in the gold complex without compromising the integrity of its structure. These results serve to highlight the need to consider all components of these spintronic assemblies.

Stretch dependent electronic structure and vibrational energy of the bipyridine single molecule junction

Change in the molecular orbital energy and vibrational energy of the bipyridine single molecule junction as a function of stretch distance.

The spin filtering effect and negative differential behavior of the graphene-pentalene-graphene molecular junction: a theoretical analysis

Density functional theory (DFT) combined with nonequilibrium Green's function (NEGF) formalism are used to investigate the effects of substitutional doping by nitrogen and sulfur on transport properties of AGNR-pentalene-AGNR nanojunction. A considerable spin filtering capability in a wide bias range is observed for all systems, which may have potential application in spintronics devices. Moreover, all model devices exhibit a negative differential effect with considerable peak-to-valley ratio. Thus, our findings provide a way to produce multifunctional spintronic devices based on nitrogen and sulfur doped pentalene-AGNR nanojunctions. The underlying mechanism for this interesting behavior was exposed by analyzing the transmission spectrum as well as the electrostatic potential distribution. In addition, a system doped with an odd number of dopant shows a rectifying efficiency comparable to other systems. The above findings strongly imply that such a multifunctional molecular device would be a useful candidate for molecular electronics. Graphical abstract The graphene-pentalene-graphene molecular junction.

Side-Group Effect on Electron Transport of Single Molecular Junctions

In this article, we have investigated the influence of the nitro side-group on the single molecular conductance of pyridine-based molecules by scanning tunneling microscopy break junction. Single molecular conductance of 4,4'-bipyridine (BPY), 3-nitro-4-(pyridin-4-yl)pyridine (BPY-N), and 3-nitro-4-(3-nitropyridin-4-yl)pyridine (BPY-2N) were measured by contact with Au electrodes. For the BPY molecular junction, two sets of conductance were found with values around 10-3.1 G₀ (high G) and 10-3.7 G₀ (low G). The addition of nitro side-group(s) onto the pyridine ring resulted in lower conductance of 10-3.8 G₀ for BPY-N and 10-3.9 G₀ for BPY-2N, respectively, which can be attributed to the twist angle of two pyridine rings. Moreover, the steric hindrance of nitro group(s) also affects the contacting configuration of electrode-molecule-electrode. As a consequence, only one set of conductance value was observed for BPY-N and BPY-2N. Our work clearly shows the important role of side-groups on the electron transport of single-molecule junctions.

Electrical and SERS detection of disulfide-mediated dimerization in single-molecule benzene-1,4-dithiol junctions

Electrical and in situ SERS characterization of the benzene-1,4-dithiol (BDT) junction suggested that dimerization of BDT contributed to the low conductance.

We applied a combination of mechanically controllable break junction (MCBJ) and in situ surface enhanced Raman spectroscopy (SERS) methods to investigate the long-standing single-molecule conductance discrepancy of prototypical benzene-1,4-dithiol (BDT) junctions. Single-molecule conductance characterization, together with configuration analysis of the molecular junction, suggested that disulfide-mediated dimerization of BDT contributed to the low conductance feature, which was further verified by the detection of S–S bond formation through in situ SERS characterization. Control experiments demonstrated that the disulfide-mediated dimerization could be tuned via the chemical inhibitor. Our findings suggest that a combined electrical and SERS method is capable of probing chemical reactions at the single-molecule level.

Shaping the Atomic-Scale Geometries of Electrodes to Control Optical and Electrical Performance of Molecular Devices

A straightforward method to generate both atomic-scale sharp and atomic-scale planar electrodes is reported. The atomic-scale sharp electrodes are generated by precisely stretching a suspended nanowire, while the atomic-scale planar electrodes are obtained via mechanically controllable interelectrodes compression followed by a thermal-driven atom migration process. Notably, the gap size between the electrodes can be precisely controlled at subangstrom accuracy with this method. These two types of electrodes are subsequently employed to investigate the properties of single molecular junctions. It is found, for the first time, that the conductance of the amine-linked molecular junctions can be enhanced ≈50% as the atomic-scale sharp electrodes are used. However, the atomic-scale planar electrodes show great advantages to enhance the sensitivity of Raman scattering upon the variation of nanogap size. The underlying mechanisms for these two interesting observations are clarified with the help of density functional theory calculation and finite-element method simulation. These findings not only provide a strategy to control the electron transport through the molecule junction, but also pave a way to modulate the optical response as well as to improve the stability of single molecular devices via the rational design of electrodes geometries.

Electrical Matching at Metal/Molecule Contacts for Efficient Heterogeneous Charge Transfer

In a metal/molecule hybrid system, unavoidable electrical mismatch exists between metal continuum states and frontier molecular orbitals. This causes energy loss in the electron conduction across the metal/molecule interface. For efficient use of energy in a metal/molecule hybrid system, it is necessary to control interfacial electronic structures. Here we demonstrate that electrical matching between a gold substrate and π-conjugated molecular wires can be obtained by using monatomic foreign metal interlayers, which can change the degree of d-π* back-donation at metal/anchor contacts. This interfacial control leads to energy level alignment between the Fermi level of the metal electrode and conduction molecular orbitals, resulting in resonant electron conduction in the metal/molecule hybrid system. When this method is applied to molecule-modified electrocatalysts, the heterogeneous electrochemical reaction rate is considerably improved with significant suppression of energy loss at the internal electron conduction.

Investigation on Single-Molecule Junctions Based on Current⁻Voltage Characteristics

The relationship between the current through an electronic device and the voltage across its terminals is a current–voltage characteristic (I–V) that determine basic device performance. Currently, I–V measurement on a single-molecule scale can be performed using break junction technique, where a single molecule junction can be prepared by trapping a single molecule into a nanogap between metal electrodes. The single-molecule I–Vs provide not only the device performance, but also reflect information on energy dispersion of the electronic state and the electron-molecular vibration coupling in the junction. This mini review focuses on recent representative studies on I–Vs of the single molecule junctions that cover investigation on the single-molecule diode property, the molecular vibration, and the electronic structure as a form of transmission probability, and electronic density of states, including the spin state of the single-molecule junctions. In addition, thermoelectronic measurements based on I–Vs and identification of the charged carriers (i.e., electrons or holes) are presented. The analysis in the single-molecule I–Vs provides fundamental and essential information for a better understanding of the single-molecule science, and puts the single molecule junction to more practical use in molecular devices.

Studies on single-molecule bridging metal electrodes: development of new characterization technique and functionalities

A single molecular junction is a nanoscale structure prepared by bridging a single molecule between macroscopic metal electrodes. It has attracted significant attention due to its unique structure and potential applications in ultra-small single molecular electronic devices. It has two metal-molecule interfaces, and thus the electronic structure of the molecule can be significantly modulated from its original one. The single molecular junction can be regarded as a new material that includes metal electrodes, a so-called "double interface material". Therefore, we can expect unconventional physical and chemical properties. To develop a better understanding of the properties and functionalities of single molecular junctions, their atomic and electronic structures should be characterized. In this review, we describe the development of these characterization techniques, such as inelastic electron tunneling spectroscopy, surface-enhanced Raman scattering, as well as shot noise and thermopower measurements. We have also described some unique properties and functionalities of single molecular junctions, such as switching and diode properties.

Electrochemical THz-SERS Observation of Thiol Monolayers on Au(111) and (100) Using Nanoparticle-assisted Gap-Mode Plasmon Excitation

Surface-enhanced Raman scattering (SERS) microscopy using nanoparticle-assisted gap-mode plasmon excitation, which enables us to observe an atomically defined planar metal surface, was combined with THz-Raman spectroscopy to observe ultra-low-frequency vibration modes under electrochemical conditions. This combination helps us to gain deeper insights into electrode/electrolyte interfaces via direct observation of extramolecular vibrations including information on intermolecular and substrate/molecule interactions. Electrochemical reductive desorption of benzenethiol derivatives from Au(111) and (100) was monitored to demonstrate the power of this spectroscopy. Structural differences of the monolayers between these surfaces were seen only in the extramolecular vibration modes such as a large-amplitude hinge-bending motion of the phenyl ring. On the Au(111), where hollow-site and bridge-site adsorption coexisted, the electrochemical reductive desorption was preferentially induced at the hollow sites.

Surface-Enhanced Raman Scattering in Molecular Junctions

Surface-enhanced Raman scattering (SERS) is a surface-sensitive vibrational spectroscopy that allows Raman spectroscopy on a single molecular scale. Here, we present a review of SERS from molecular junctions, in which a single molecule or molecules are made to have contact from the top to the bottom of metal surfaces. The molecular junctions are nice platforms for SERS as well as transport measurement. Electronic characterization based on the transport measurements of molecular junctions has been extensively studied for the development of miniaturized electronic devices. Simultaneous SERS and transport measurement of the molecular junctions allow both structural (geometrical) and electronic information on the single molecule scale. The improvement of SERS measurement on molecular junctions open the door toward new nanoscience and nanotechnology in molecular electronics.

Controlling the thermoelectric effect by mechanical manipulation of the electron's quantum phase in atomic junctions

The thermoelectric voltage developed across an atomic metal junction (i.e., a nanostructure in which one or a few atoms connect two metal electrodes) in response to a temperature difference between the electrodes, results from the quantum interference of electrons that pass through the junction multiple times after being scattered by the surrounding defects. Here we report successfully tuning this quantum interference and thus controlling the magnitude and sign of the thermoelectric voltage by applying a mechanical force that deforms the junction. The observed switching of the thermoelectric voltage is reversible and can be cycled many times. Our ab initio and semi-empirical calculations elucidate the detailed mechanism by which the quantum interference is tuned. We show that the applied strain alters the quantum phases of electrons passing through the narrowest part of the junction and hence modifies the electronic quantum interference in the device. Tuning the quantum interference causes the energies of electronic transport resonances to shift, which affects the thermoelectric voltage. These experimental and theoretical studies reveal that Au atomic junctions can be made to exhibit both positive and negative thermoelectric voltages on demand, and demonstrate the importance and tunability of the quantum interference effect in the atomic-scale metal nanostructures.

In situ observation of the formation process for free-standing Au nanowires with a scanning electron microscope

We have developed a simultaneous electronic and structural characterization method for studying the formation process for Au nanowires. The method is based on two-probe electronic transport measurement of free-standing Au nanowires and simultaneous structural characterization using scanning electron microscopy (SEM). We measured the electronic currents during the electromigration (EM)-induced narrowing process for the free-standing Au nanowires. A free-standing Au nanowire with a desired conductance value was fabricated by EM. Simultaneous SEM and conductance measurements revealed the EM-induced narrowing process for the Au wires, in which material transfer in the nanowires caused growth towards the positively biased electrode and contact failure at the negatively biased electrode. The narrowed free-standing Au nanowires were stable and could be maintained for more than 10 h without their conductance changing. These results indicate the high stability of the EM-processed Au nanowires compared to Au nanowires fabricated by mechanical elongation or the breaking of Au nanocontacts.

Atomic structure of water/Au, Ag, Cu and Pt atomic junctions

Much progress has been made in understanding the transport properties of atomic-scale conductors. We prepared atomic-scale metal contacts of Cu, Ag, Au and Pt using a mechanically controllable break junction method at 10 K in a cryogenic vacuum. Water molecules were exposed to the metal atomic contacts and the effect of molecular adsorption was investigated by electronic conductance measurements. Statistical analysis of the electronic conductance showed that the water molecule(s) interacted with the surface of the inert Au contact and the reactive Cu ant Pt contacts, where molecular adsorption decreased the electronic conductance. A clear conductance signature of water adsorption was not apparent at the Ag contact. Detailed analysis of the conductance behaviour during a contact-stretching process indicated that metal atomic wires were formed for the Au and Pt contacts. The formation of an Au atomic wire consisting of low coordination number atoms leads to increased reactivity of the inert Au surface towards the adsorption of water.

Evaluation of the Electronic Structure of Single-Molecule Junctions Based on Current-Voltage and Thermopower Measurements: Application to C60 Single-Molecule Junction

The electronic structure of molecular junctions has a significant impact on their transport properties. Despite the decisive role of the electronic structure, a complete characterization of the electronic structure remains a challenge. This is because there is no straightforward way of measuring electron spectroscopy for an individual molecule trapped in a nanoscale gap between two metal electrodes. Herein, a comprehensive approach to obtain a detailed description of the electronic structure in single-molecule junctions based on the analysis of current-voltage (I-V) and thermoelectric characteristics is described. It is shown that the electronic structure of the prototypical C₆₀ single-molecule junction can be resolved by analyzing complementary results of the I-V and thermoelectric measurement. This combined approach confirmed that the C₆₀ single-molecule junction was highly conductive with molecular electronic conductances of 0.033 and 0.003 G₀ and a molecular Seebeck coefficient of -12 μV K^-1 . In addition, we revealed that charge transport was mediated by a LUMO whose energy level was located 0.5≈0.6 eV above the Fermi level of the Au electrode.

Fabrication of sub-1 nm gap electrodes using metal-mask patterning and conductivity measurements of molecules in nanoscale spaces

Fabrications of sub-1 nm gap Au electrodes using a metal mask for patterning were achieved. Because the procedure does not involve wet processing, the ranges of possible electrode and substrate materials for the electrodes are greatly expanded.

Controlling the formation process and atomic structures of single pyrazine molecular junction by tuning the strength of the metal–molecule interaction

Fabrication of single pyrazine molecular junction with Au, Ag and Cu electrodes using mechanically controllable break junction technique in ultra-high vacuum.

Estimating the Landauer-Büttiker transmission function from single molecule break junction experiments

When investigating the electronic response properties of molecules, experiments often measure conductance whereas computation predicts the transmission probability. Although Landauer-Büttiker theory usually relates the two, comparison between experiment and computation remains difficult because experimental data (specifically those from break junctions) are statistical and computational results are deterministic. In this work we develop tools to quantitatively estimate-with error bars-the shape of the Landauer-Büttiker transmission function directly from experimental statistics on conductance and thermopower (if the latter is also available). We subsequently apply these tools to existing data, demonstrating a rigorous statistical comparison between experimental and computational results on molecular electron transport.

Determination of the number of atoms present in nano contact based on shot noise measurements with highly stable nano-fabricated electrodes

A highly stable experimental setup was developed for the measurement of shot noise in atomic contacts and molecular junctions to determine the number of atoms or molecules present. The use of a nano-fabricated mechanically controllable break junction (MCBJ) electrode improved the overall stability of the experimental setup. The improved stability of the system and optimization of measurement system enabled us to comprehensively investigate the shot noise as well as charge transport properties in Au atomic contacts and molecular junctions. We present a solid proof that the number of atoms (cross sectional atom) in the Au atomic contacts was exactly one. In the atomic contacts, contribution from the additional channels was under the detection limit. Furthermore, the effect of molecular adsorption on the charge transport in the Au atomic contact was investigated. Additional transport channels were opened by exposing pyrazine molecules to the Au contacts, which gave rise to an increase in the Fano factor in the shot noise.