1
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Gome JA, Avery ZT, Lawson NR, Stansfield OG, Evans JD, Gardiner MG, Connell TU, Preston D. Low-Symmetry Face-Capped Fe(II) Tetrahedra Through Anisotropic Ligand Extension. Angew Chem Int Ed Engl 2025; 64:e202503473. [PMID: 40043175 PMCID: PMC12087859 DOI: 10.1002/anie.202503473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2025] [Revised: 03/04/2025] [Accepted: 03/05/2025] [Indexed: 03/18/2025]
Abstract
Low-symmetry cages are attractive metallo-supramolecular targets, as they may possess different characteristics to their higher symmetry analogs. There are no current generalizable routes for the formation of low-symmetry face-capped tetrahedra. We report here a strategy using tritopic tris-bidentate ligands with arms of different lengths to access novel tetrahedra. The use of "isosceles" ligands (two arms the same, one different) gives tetragonal disphenoid structures, while a "scalene" ligand (all three arms different) gives a rhombic disphenoid structure. In this last case, diastereoselectivity is also achieved. Distortion away from a perfect tetrahedron resulted in alteration of the character of the respective cage. More distorted cages were more prone to loss of structural integrity upon introduction of highly coordinating dimethyl sulfoxide solvent into the cage in acetonitrile solution. As well, increasing distortion was shown to increase the ease of oxidation from Fe(II) to Fe(III) within the cages.
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Affiliation(s)
- Jacob A. Gome
- Research School of ChemistryAustralian National UniversityCanberraACT2601Australia
| | - Zack T. Avery
- Research School of ChemistryAustralian National UniversityCanberraACT2601Australia
| | - Nina R. Lawson
- Research School of ChemistryAustralian National UniversityCanberraACT2601Australia
| | - Oliver G. Stansfield
- Centre for Sustainable BioproductsFaculty of ScienceEngineering and Built EnvironmentDeakin UniversityGeelongVictoria3220Australia
| | - Jack D. Evans
- School of PhysicsChemistry and Earth SciencesThe University of AdelaideAdelaideSA5005Australia
| | - Michael G. Gardiner
- Research School of ChemistryAustralian National UniversityCanberraACT2601Australia
| | - Timothy U. Connell
- Centre for Sustainable BioproductsFaculty of ScienceEngineering and Built EnvironmentDeakin UniversityGeelongVictoria3220Australia
| | - Dan Preston
- Research School of ChemistryAustralian National UniversityCanberraACT2601Australia
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2
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Wang Z, Wang W, Luo AQ, Yuan LM. Recent progress for chiral stationary phases based on chiral porous materials in high-performance liquid chromatography and gas chromatography separation. J Sep Sci 2024; 47:e2400073. [PMID: 38965996 DOI: 10.1002/jssc.202400073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Revised: 05/24/2024] [Accepted: 05/31/2024] [Indexed: 07/06/2024]
Abstract
Chirality is a fundamental property of nature. Separation and analysis of racemates are of great importance in the fields of medicine and the production of chiral biopharmaceutical intermediates. Chiral chromatography has the characteristics of a wide separation range, fast separation speed, and high efficiency. The development and preparation of novel chiral stationary phases with good chiral recognition and separation capacity is the core and key of chiral chromatographic separation and analysis. In this work, the representative research progress of novel chiral porous crystal materials including chiral covalent organic frameworks, chiral porous organic cages, chiral metal-organic frameworks, and chiral metal-organic cages used as chiral stationary phases of capillary gas chromatography and high-performance liquid chromatography over the last 4 years is reviewed in detail. The chiral recognition and separation properties of the representative studies in this review are also introduced and discussed.
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Affiliation(s)
- Zhen Wang
- Key Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China
| | - Wei Wang
- Key Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China
| | - Ai-Qin Luo
- Key Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China
| | - Li-Ming Yuan
- Department of Chemistry, Yunnan Normal University, Kunming, P. R. China
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3
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Wang HP, Eichhöfer A, Gu ZG, Gruber N, Stadler AM. Anion-encapsulating, discrete prism and extended frusta, from trimetallated triangular macrocycles and linkers. Chem Commun (Camb) 2023; 59:13966-13969. [PMID: 37933533 DOI: 10.1039/d3cc00137g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2023]
Abstract
Reaction of a trinuclear triangular macrocyclic complex Pb3L(CF3SO3)6 with bidentate linkers in a ratio of 3 equiv. of linker per 2 equiv. of complex, produces a prismatic structure with 4,4'-dipyridyl, and two unprecedented, extended 3D frustum-like structures with 1,2-di(4-pyridyl)ethylene and 1,4-di(4-pyridyl)benzene. The cavities of these structures encapsulate triflate anions.
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Affiliation(s)
- Hai-Ping Wang
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, P. R. China
| | - Andreas Eichhöfer
- Institute of Nanotechnology (INT), Karlsruhe Institute of Technolgoy (KIT), Eggenstein-Leopoldshafen 76344, Germany
- Lehn Institute of Functional Materials, School of Chemistry and Chemical Engineering, Sun Yat-Sen University, Guangzhou, 510275, P.R. China
- Karlsruhe Nano Micro Facility (KNMFi), Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen 76344, Germany
| | - Zhi-Gang Gu
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P.R. China
| | - Nathalie Gruber
- Service de Radiocristallographie, Faculté de Chimie, 1, rue Blaise Pascal, Strasbourg, France
| | - Adrian-Mihail Stadler
- Institute of Nanotechnology (INT), Karlsruhe Institute of Technolgoy (KIT), Eggenstein-Leopoldshafen 76344, Germany
- University of Strasbourg Institute for Advanced Study (USIAS), 5 Allée du Général Rouvillois, Strasbourg 67083, France
- Institut de Science et Ingénierie Supramoléculaires (ISIS), UMR 7006, CNRS and Université de Strasbourg, 8 Allée G. Monge, Strasbourg 67000, France.
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4
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Sun B, Meeus EJ, de Zwart FJ, Bobylev EO, Mooibroek TJ, Mathew S, Reek JNH. Chirality-Driven Self-Assembly of Discrete, Homochiral Fe II 2 L 3 Cages. Chemistry 2023; 29:e202203900. [PMID: 36645137 DOI: 10.1002/chem.202203900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 01/13/2023] [Accepted: 01/16/2023] [Indexed: 01/17/2023]
Abstract
Coordination chemistry is a powerful method to synthesize supramolecular cages with distinct features that suit specific applications. This work demonstrates the synthesis of discrete, homochiral FeII 2 L3 cages via chirality-driven self-assembly. Specifically, the installation of chirality - at both the vertices and ligand backbones - allows the formation of discrete, homochiral FeII 2 L3 cages of different sizes via stereochemical control of the iron(II) centers. We observed that larger cages require multiple chiral centra (chiral ligands and vertices). In contrast, the formation of smaller cages is stereoselective with solely chiral ligands. The latter cages can also be formed from two chiral subcomponents, but only when they have matching chirality. Single-crystal X-ray diffraction of these smaller FeII 2 L3 cages revealed several non-covalent interactions as a driving force for narcissistic chiral self-sorting. This expected behavior was confirmed utilizing the shorter ligands in racemic form, yielding discrete, homochiral FeII 2 L3 cages formed in enantiomeric pairs.
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Affiliation(s)
- Bin Sun
- Homogeneous, Supramolecular and Bio-Inspired Catalysis group, van 't Hoff Institute for Molecular Sciences, University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Eva J Meeus
- Homogeneous, Supramolecular and Bio-Inspired Catalysis group, van 't Hoff Institute for Molecular Sciences, University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Felix J de Zwart
- Homogeneous, Supramolecular and Bio-Inspired Catalysis group, van 't Hoff Institute for Molecular Sciences, University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Eduard O Bobylev
- Homogeneous, Supramolecular and Bio-Inspired Catalysis group, van 't Hoff Institute for Molecular Sciences, University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Tiddo J Mooibroek
- Homogeneous, Supramolecular and Bio-Inspired Catalysis group, van 't Hoff Institute for Molecular Sciences, University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Simon Mathew
- Homogeneous, Supramolecular and Bio-Inspired Catalysis group, van 't Hoff Institute for Molecular Sciences, University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Joost N H Reek
- Homogeneous, Supramolecular and Bio-Inspired Catalysis group, van 't Hoff Institute for Molecular Sciences, University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
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5
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Carrillo U, Francés-Monerris A, Marri AR, Cebrián C, Gros PC. Substituent-Induced Control of fac/ mer Isomerism in Azine-NHC Fe(II) Complexes. ACS ORGANIC & INORGANIC AU 2022; 2:525-536. [PMID: 36855530 PMCID: PMC9955161 DOI: 10.1021/acsorginorgau.2c00038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Revised: 09/12/2022] [Accepted: 09/13/2022] [Indexed: 11/29/2022]
Abstract
The stereoselective synthesis of geometrical iron(II) complexes bearing azine-NHC ligands is described. Facial and meridional selectivity is achieved as a function of the steric demand of the azine unit, with no remarkable influence of the carbene nature. More specifically, meridional complexes are obtained upon selecting bulky 5-mesityl-substituted pyridyl coordinating units. Unexpectedly, increase of the steric hindrance in the α position with respect to the N coordinating atom results in an exclusive facial configuration, which is in stark contrast to the meridional selectivity induced by other reported α-substituted bidentate ligands. Investigation of the structure and the optical and electrochemical properties of the here-described complexes has revealed the non-negligible effect of the fac/mer ligand configuration around the metal center.
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6
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McTernan C, Davies JA, Nitschke JR. Beyond Platonic: How to Build Metal-Organic Polyhedra Capable of Binding Low-Symmetry, Information-Rich Molecular Cargoes. Chem Rev 2022; 122:10393-10437. [PMID: 35436092 PMCID: PMC9185692 DOI: 10.1021/acs.chemrev.1c00763] [Citation(s) in RCA: 105] [Impact Index Per Article: 35.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Indexed: 12/17/2022]
Abstract
The field of metallosupramolecular chemistry has advanced rapidly in recent years. Much work in this area has focused on the formation of hollow self-assembled metal-organic architectures and exploration of the applications of their confined nanospaces. These discrete, soluble structures incorporate metal ions as 'glue' to link organic ligands together into polyhedra.Most of the architectures employed thus far have been highly symmetrical, as these have been the easiest to prepare. Such high-symmetry structures contain pseudospherical cavities, and so typically bind roughly spherical guests. Biomolecules and high-value synthetic compounds are rarely isotropic, highly-symmetrical species. To bind, sense, separate, and transform such substrates, new, lower-symmetry, metal-organic cages are needed. Herein we summarize recent approaches, which taken together form the first draft of a handbook for the design of higher-complexity, lower-symmetry, self-assembled metal-organic architectures.
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Affiliation(s)
| | | | - Jonathan R. Nitschke
- Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
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7
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Liu W, Liu G, Zhu X, Han X, Lu A, Lu S, Shi L, Hao XQ, Song MP. Tailored metal–organic tetrahedral nanocages with aggregation-induced emission for an anti-counterfeiting ink and stimulus-responsive luminescence. NEW J CHEM 2022. [DOI: 10.1039/d2nj00382a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Tailored metal–organic tetrahedral nanocages with aggregation-induced emission for an anti-counterfeiting ink and stimulus-responsive luminescence.
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Affiliation(s)
- Wenxiu Liu
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Guoxing Liu
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
- College of Science, Henan Agricultural University, Zhengzhou, 450002, China
| | - Xinju Zhu
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Xin Han
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Anting Lu
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Shuai Lu
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Linlin Shi
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Xin-Qi Hao
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Mao-Ping Song
- Green Catalysis Center, and College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
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8
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Pachisia S, Gupta R. Supramolecular catalysis: the role of H-bonding interactions in substrate orientation and activation. Dalton Trans 2021; 50:14951-14966. [PMID: 34617524 DOI: 10.1039/d1dt02131a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Hydrogen bonding plays significant roles in various biological processes during substrate orientation and binding and therefore assists in assorted organic transformations. However, replicating the intricate selection of hydrogen bonds, as observed in nature, in synthetic complexes has met with only limited success. Despite this fact, recent times have seen the emergence of several notable examples where hydrogen bonds have been introduced in synthetic complexes. A few such examples have also illustrated the substantial role played by the hydrogen bonds in influencing and often controlling the catalytic outcome. This perspective presents selected examples illustrating the significance of hydrogen bonds offered by the coordination and the organometallic complexes that aid in providing the desired orientation to a substrate adjacent to a catalytic metal center and remarkably assisting in the catalysis.
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Affiliation(s)
- Sanya Pachisia
- Department of Chemistry, University of Delhi, Delhi - 110007, India.
| | - Rajeev Gupta
- Department of Chemistry, University of Delhi, Delhi - 110007, India.
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9
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Chen Y, Wu G, Chen B, Qu H, Jiao T, Li Y, Ge C, Zhang C, Liang L, Zeng X, Cao X, Wang Q, Li H. Self‐Assembly of a Purely Covalent Cage with Homochirality by Imine Formation in Water. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202106428] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Yixin Chen
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Guangcheng Wu
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Binbin Chen
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Hang Qu
- State Key Laboratory of Physical Chemistry of Solid Surfaces iChEM and College of Chemistry and Chemical Engineering Xiamen University Xiamen 361005 China
| | - Tianyu Jiao
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Yintao Li
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Chenqi Ge
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Chi Zhang
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Lixin Liang
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Xiuqiong Zeng
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Xiaoyu Cao
- State Key Laboratory of Physical Chemistry of Solid Surfaces iChEM and College of Chemistry and Chemical Engineering Xiamen University Xiamen 361005 China
| | - Qi Wang
- Department of Chemistry Zhejiang University Hangzhou 310027 China
| | - Hao Li
- Department of Chemistry Zhejiang University Hangzhou 310027 China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center Hangzhou 311215 China
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10
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Chen Y, Wu G, Chen B, Qu H, Jiao T, Li Y, Ge C, Zhang C, Liang L, Zeng X, Cao X, Wang Q, Li H. Self-Assembly of a Purely Covalent Cage with Homochirality by Imine Formation in Water. Angew Chem Int Ed Engl 2021; 60:18815-18820. [PMID: 34129262 DOI: 10.1002/anie.202106428] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Revised: 06/04/2021] [Indexed: 11/11/2022]
Abstract
Self-assembly of host molecules in aqueous media via metal-ligand coordination is well developed. However, the preparation of purely covalent counterparts in water has remained a formidable task. An anionic tetrahedron cage was successfully self-assembled in a [4+4] manner by condensing a trisamine and a trisformyl in water. Even although each individual imine bond is rather labile and apt to hydrolyze in water, the tetrahedron is remarkably stable or inert due to multivalence. The tetrahedral cages, as well as its neutral counterparts dissolved in organic solvent, have homochirality, namely that their four propeller-shaped trisformyl residues adopt the same rotational conformation. The cage is able to take advantage of hydrophobic effect to accommodate a variety of guest molecules in water. When a chiral guest was recognized, the formation of one enantiomer of the cage became more favored relative to the other. As a consequence, the cage could be produced in an enantioselective manner. The tetrahedron is able to maintain its chirality after removal of the chiral guest-probably on account of the cooperative occurrence of intramolecular forces that restrict the intramolecular flipping of phenyl units in the cage framework.
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Affiliation(s)
- Yixin Chen
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Guangcheng Wu
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Binbin Chen
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Hang Qu
- State Key Laboratory of Physical Chemistry of Solid Surfaces, iChEM and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, China
| | - Tianyu Jiao
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Yintao Li
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Chenqi Ge
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Chi Zhang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Lixin Liang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Xiuqiong Zeng
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Xiaoyu Cao
- State Key Laboratory of Physical Chemistry of Solid Surfaces, iChEM and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, China
| | - Qi Wang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Hao Li
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China.,ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, 311215, China
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11
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Morozumi T, Matsuoka R, Nakamura T, Nabeshima T. Solvent-dependent fac/ mer-isomerization and self-assembly of triply helical complexes bearing a pivot part. Chem Sci 2021; 12:7720-7726. [PMID: 34168824 PMCID: PMC8188510 DOI: 10.1039/d1sc01529j] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Tris-chelate metal complexes of unsymmetrical bidentate ligands can form two geometric stereoisomers, facial (fac) and meridional (mer) isomers. Due to the small difference in their properties, the highly-selective synthesis of one of the isomers is challenging. We now designed a series of tripodal ligands with a tris(3-(2-(methyleneoxy)ethoxy)phenyl)methane pivot. Surprisingly, the ratio of the fac/mer isomers of the triply helical FeII complexes significantly changed depending on the solvents. To the best of our knowledge, this is the first example of fac/mer isomerism of a labile tris(2,2'-bipyridine) FeII complex governed by the solvent. Furthermore, well-defined self-assemblies were quantitatively produced by imine bond formation with a suitable diamine. The supramolecular assemblies contained only the fac isomer even though a mixture of the two isomers existed in solution before the condensation reaction. Namely, the self-assembly formation effectively adjusted the geometries of the building unit that results in the suitable supramolecular structure.
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Affiliation(s)
- Takuma Morozumi
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba 1-1-1 Tennodai, Tsukuba Ibaraki 305-8571 Japan
| | - Ryota Matsuoka
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba 1-1-1 Tennodai, Tsukuba Ibaraki 305-8571 Japan
| | - Takashi Nakamura
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba 1-1-1 Tennodai, Tsukuba Ibaraki 305-8571 Japan
| | - Tatsuya Nabeshima
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba 1-1-1 Tennodai, Tsukuba Ibaraki 305-8571 Japan
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12
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Morita H, Akine S, Nakamura T, Nabeshima T. Exclusive formation of a meridional complex of a tripodand and perfect suppression of guest recognition. Chem Commun (Camb) 2021; 57:2124-2127. [PMID: 33538748 DOI: 10.1039/d1cc00146a] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Tripodal ligands have been utilized for complexation-induced structural change, but all the tripodal complexes reported so far are facial isomers, which do not completely reduce the recognition ability by closing the binding pocket. We now report the first example of the selective synthesis of a meridional tripodal complex. The tripodal ligand with a 1,3,5-triethyl-2,4,6-tris(methylene)benzene pivot possessing 2,2'-bipyridine on each arm exclusively formed a mononuclear complex with the mer-[Fe(bpy)]2+ unit. The meridional tripodal complex has a unique structure in which one bipyridine unit is self-penetrated. As a result of cavity blockage, the ion recognition property of the tripodand has been successfully suppressed.
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Affiliation(s)
- Hiroki Morita
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan.
| | - Shigehisa Akine
- Graduate School of Natural Science and Technology and WPI Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
| | - Takashi Nakamura
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan.
| | - Tatsuya Nabeshima
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan.
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13
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Lai YL, Wang XZ, Zhou XC, Dai RR, Zhou XP, Li D. Self-assembly of a Mixed Valence Copper Triangular Prism and Transformation to Cage Triggered by an External Stimulus. Inorg Chem 2020; 59:17374-17378. [PMID: 33170005 DOI: 10.1021/acs.inorgchem.0c02682] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A triangular prismatic metal-organic cage based on mixed valence copper ions has been designed and synthesized by using metallocycle panels and pillar ligands. The triangular prism will be quickly transformed to a 10-nuclear cage upon an external chemical stimulus, which features a bicapped square antiprism structure. This prismatic cage can act as a catalyst for oxidation of aromatic alcohols to their corresponding aromatic aldehydes with high yields at room temperature under O2 atmosphere.
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Affiliation(s)
- Ya-Liang Lai
- College of Chemistry and Materials Science, Guangdong Provincial Key Laboratory of Functional Supramolecular Coordination Materials and Applications, Jinan University, Guangzhou, Guangdong 510632, P. R. China
| | - Xue-Zhi Wang
- College of Chemistry and Materials Science, Guangdong Provincial Key Laboratory of Functional Supramolecular Coordination Materials and Applications, Jinan University, Guangzhou, Guangdong 510632, P. R. China
| | - Xian-Chao Zhou
- College of Chemistry and Materials Science, Guangdong Provincial Key Laboratory of Functional Supramolecular Coordination Materials and Applications, Jinan University, Guangzhou, Guangdong 510632, P. R. China
| | - Rui-Rong Dai
- College of Chemistry and Materials Science, Guangdong Provincial Key Laboratory of Functional Supramolecular Coordination Materials and Applications, Jinan University, Guangzhou, Guangdong 510632, P. R. China
| | - Xiao-Ping Zhou
- College of Chemistry and Materials Science, Guangdong Provincial Key Laboratory of Functional Supramolecular Coordination Materials and Applications, Jinan University, Guangzhou, Guangdong 510632, P. R. China
| | - Dan Li
- College of Chemistry and Materials Science, Guangdong Provincial Key Laboratory of Functional Supramolecular Coordination Materials and Applications, Jinan University, Guangzhou, Guangdong 510632, P. R. China
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14
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Wang H, Zhou L, Zheng Y, Wang K, Song B, Yan X, Wojtas L, Wang X, Jiang X, Wang M, Sun Q, Xu B, Yang H, Sue AC, Chan Y, Sessler JL, Jiao Y, Stang PJ, Li X. Double‐Layered Supramolecular Prisms Self‐Assembled by Geometrically Non‐equivalent Tetratopic Subunits. Angew Chem Int Ed Engl 2020; 60:1298-1305. [DOI: 10.1002/anie.202010805] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2020] [Indexed: 12/14/2022]
Affiliation(s)
- Heng Wang
- College of Chemistry and Environmental Engineering Shenzhen University Shenzhen 518055 China
| | - Li‐Peng Zhou
- State Key Laboratory of Structural Chemistry Fujian Institute of Research on the Structure of Matter Chinese Academy of Sciences Fuzhou 350002 China
| | - Yu Zheng
- Department of Physics Arizona State University Tempe AZ 85287 USA
| | - Kun Wang
- Department of Physics and Astronomy Department of Chemistry Mississippi State University Mississippi State MS 39762 USA
| | - Bo Song
- Department of Chemistry Northwestern University Evanston IL 60208 USA
| | - Xuzhou Yan
- School of Chemistry and Chemical Engineering Shanghai Jiao Tong University Shanghai 200240 China
| | - Lukasz Wojtas
- Department of Chemistry University of South Florida Tampa FL 33620 USA
| | - Xu‐Qing Wang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes Department of Chemistry East China Normal University Shanghai 200062 China
| | - Xin Jiang
- State Key Laboratory of Supramolecular Structure and Materials College of Chemistry Jilin University Changchun Jilin 130012 China
| | - Ming Wang
- State Key Laboratory of Supramolecular Structure and Materials College of Chemistry Jilin University Changchun Jilin 130012 China
| | - Qing‐Fu Sun
- State Key Laboratory of Structural Chemistry Fujian Institute of Research on the Structure of Matter Chinese Academy of Sciences Fuzhou 350002 China
| | - Bingqian Xu
- College of Engineering and Nanoscale Science and Engineering Center University of Georgia Athens GA 30602 USA
| | - Hai‐Bo Yang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes Department of Chemistry East China Normal University Shanghai 200062 China
| | - Andrew C.‐H. Sue
- Institute for Molecular Design and Synthesis, School of Pharmaceutical Science & Technology Tianjin University Tianjin 300072 China
| | - Yi‐Tsu Chan
- Department of Chemistry National (Taiwan) University Taipei 10617 Taiwan
| | | | - Yang Jiao
- Department of Physics Arizona State University Tempe AZ 85287 USA
| | - Peter J. Stang
- Department of Chemistry University of Utah Salt Lake City UT 84112 USA
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering Shenzhen University Shenzhen 518055 China
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15
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Wang H, Zhou L, Zheng Y, Wang K, Song B, Yan X, Wojtas L, Wang X, Jiang X, Wang M, Sun Q, Xu B, Yang H, Sue AC, Chan Y, Sessler JL, Jiao Y, Stang PJ, Li X. Double‐Layered Supramolecular Prisms Self‐Assembled by Geometrically Non‐equivalent Tetratopic Subunits. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202010805] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Heng Wang
- College of Chemistry and Environmental Engineering Shenzhen University Shenzhen 518055 China
| | - Li‐Peng Zhou
- State Key Laboratory of Structural Chemistry Fujian Institute of Research on the Structure of Matter Chinese Academy of Sciences Fuzhou 350002 China
| | - Yu Zheng
- Department of Physics Arizona State University Tempe AZ 85287 USA
| | - Kun Wang
- Department of Physics and Astronomy Department of Chemistry Mississippi State University Mississippi State MS 39762 USA
| | - Bo Song
- Department of Chemistry Northwestern University Evanston IL 60208 USA
| | - Xuzhou Yan
- School of Chemistry and Chemical Engineering Shanghai Jiao Tong University Shanghai 200240 China
| | - Lukasz Wojtas
- Department of Chemistry University of South Florida Tampa FL 33620 USA
| | - Xu‐Qing Wang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes Department of Chemistry East China Normal University Shanghai 200062 China
| | - Xin Jiang
- State Key Laboratory of Supramolecular Structure and Materials College of Chemistry Jilin University Changchun Jilin 130012 China
| | - Ming Wang
- State Key Laboratory of Supramolecular Structure and Materials College of Chemistry Jilin University Changchun Jilin 130012 China
| | - Qing‐Fu Sun
- State Key Laboratory of Structural Chemistry Fujian Institute of Research on the Structure of Matter Chinese Academy of Sciences Fuzhou 350002 China
| | - Bingqian Xu
- College of Engineering and Nanoscale Science and Engineering Center University of Georgia Athens GA 30602 USA
| | - Hai‐Bo Yang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes Department of Chemistry East China Normal University Shanghai 200062 China
| | - Andrew C.‐H. Sue
- Institute for Molecular Design and Synthesis, School of Pharmaceutical Science & Technology Tianjin University Tianjin 300072 China
| | - Yi‐Tsu Chan
- Department of Chemistry National (Taiwan) University Taipei 10617 Taiwan
| | | | - Yang Jiao
- Department of Physics Arizona State University Tempe AZ 85287 USA
| | - Peter J. Stang
- Department of Chemistry University of Utah Salt Lake City UT 84112 USA
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering Shenzhen University Shenzhen 518055 China
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16
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Plajer AJ, Rizzuto FJ, von Krbek LKS, Gisbert Y, Martínez-Agramunt V, Nitschke JR. Oxidation triggers guest dissociation during reorganization of an Fe II 4L 6 twisted parallelogram. Chem Sci 2020; 11:10399-10404. [PMID: 34123180 PMCID: PMC8162311 DOI: 10.1039/d0sc04352d] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2020] [Accepted: 09/09/2020] [Indexed: 12/12/2022] Open
Abstract
A three-dimensional FeII 4L6 parallelogram was prepared from ferrocene-containing ditopic ligands. The steric preference of the bulky ferrocene cores towards meridional vertex coordination brought about this new structure type, in which the ferrocene units adopt three distinct conformations. The structure possesses two distinct, bowl-like cavities that host anionic guests. Oxidation of the ferrocene FeII to ferrocenium FeIII causes rotation of the ferrocene hinges, converting the structure to an FeII 1L1 + species with release of anionic guests, even though the average charge per iron increases in a way that would ordinarily increase guest binding strength. The degrees of freedom exhibited by these new structures - derived from the different configurations of the three ligands surrounding a meridional FeII center and the rotation of ferrocene cores - thus underpin their ability to reconfigure and eject guests upon oxidation.
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Affiliation(s)
- Alex J Plajer
- Department of Chemistry, University of Cambridge Lensfield Rd Cambridge CB2 1EW UK
| | - Felix J Rizzuto
- Department of Chemistry, University of Cambridge Lensfield Rd Cambridge CB2 1EW UK
| | | | - Yohan Gisbert
- Department of Chemistry, University of Cambridge Lensfield Rd Cambridge CB2 1EW UK
| | | | - Jonathan R Nitschke
- Department of Chemistry, University of Cambridge Lensfield Rd Cambridge CB2 1EW UK
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17
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Pilgrim BS, Champness NR. Metal-Organic Frameworks and Metal-Organic Cages - A Perspective. Chempluschem 2020; 85:1842-1856. [PMID: 32833342 DOI: 10.1002/cplu.202000408] [Citation(s) in RCA: 67] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Revised: 07/31/2020] [Indexed: 12/20/2022]
Abstract
The fields of metal-organic cages (MOCs) and metal-organic frameworks (MOFs) are both highly topical and continue to develop at a rapid pace. Despite clear synergies between the two fields, overlap is rarely observed. This article discusses the peculiarities and similarities of MOCs and MOFs in terms of synthetic strategies and approaches to system characterisation. The stability of both classes of material is compared, particularly in relation to their applications in guest storage and catalysis. Lastly, suggestions are made for opportunities for each field to learn and develop in partnership with the other.
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Affiliation(s)
- Ben S Pilgrim
- School of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, United Kingdom
| | - Neil R Champness
- School of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, United Kingdom
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18
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Liu CL, Bobylev EO, Fu Y, Poole DA, Robeyns K, Fustin CA, Garcia Y, Reek JNH, Singleton ML. Balancing Ligand Flexibility versus Rigidity for the Stepwise Self-Assembly of M 12 L 24 via M 6 L 12 Metal-Organic Cages. Chemistry 2020; 26:11960-11965. [PMID: 32378754 DOI: 10.1002/chem.202001399] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Indexed: 11/11/2022]
Abstract
Non-covalent interactions are important for directing protein folding across multiple intermediates and can even provide access to multiple stable structures with different properties and functions. Herein, we describe an approach for mimicking this behavior in the self-assembly of metal-organic cages. Two ligands, the bend angles of which are controlled by non-covalent interactions and one ligand lacking the above-mentioned interactions, were synthesized and used for self-assembly with Pd2+ . As these weak interactions are easily broken, the bend angles have a controlled flexibility giving access to M2 (L1)4 , M6 (L2)12 , and M12 (L2)24 cages. By controlling the self-assembly conditions this process can be directed in a stepwise fashion. Additionally, the multiple endohedral hydrogen-bonding sites on the ligand were found to play a role in the binding and discrimination of neutral guests.
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Affiliation(s)
- Cui-Lian Liu
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium
| | - Eduard O Bobylev
- Van''t Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Yang Fu
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium
| | - David A Poole
- Van''t Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Koen Robeyns
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium
| | - Charles-André Fustin
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium
| | - Yann Garcia
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium
| | - Joost N H Reek
- Van''t Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Michael L Singleton
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, Louvain-la-Neuve, 1348, Belgium
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19
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Kieffer M, Bilbeisi RA, Thoburn JD, Clegg JK, Nitschke JR. Guest Binding Drives Host Redistribution in Libraries of Co II 4 L 4 Cages. Angew Chem Int Ed Engl 2020; 59:11369-11373. [PMID: 32243707 PMCID: PMC7383889 DOI: 10.1002/anie.202004627] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Indexed: 12/29/2022]
Abstract
Two CoII 4 L4 tetrahedral cages prepared from similar building blocks showed contrasting host-guest properties. One cage did not bind guests, whereas the second encapsulated a series of anions, due to electronic and geometric effects. When the building blocks of both cages were present during self-assembly, a library of five CoII LA x LB 4-x cages was formed in a statistical ratio in the absence of guests. Upon incorporation of anions able to interact preferentially with some library members, the products obtained were redistributed in favor of the best anion binders. To quantify the magnitudes of these templation effects, ESI-MS was used to gauge the effect of each template upon library redistribution.
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Affiliation(s)
- Marion Kieffer
- Department of ChemistryUniversity of CambridgeLensfield RoadCambridgeCB2 1EWUK
| | - Rana A. Bilbeisi
- Department of ChemistryUniversity of CambridgeLensfield RoadCambridgeCB2 1EWUK
- Department of Civil and Environmental EngineeringAmerican University of BeirutBeirutLebanon
| | - John D. Thoburn
- Department of ChemistryRandolph-Macon CollegeAshlandVA23005USA
| | - Jack K. Clegg
- Department of ChemistryUniversity of CambridgeLensfield RoadCambridgeCB2 1EWUK
- School of Chemistry and Molecular BiosciencesThe University of QueenslandSt LuciaQLD4072Australia
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20
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Hooley RJ. No, Not That Way, the Other Way: Creating Active Sites in Self-Assembled Host Molecules. Synlett 2020. [DOI: 10.1055/s-0040-1707125] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
This Account describes our efforts over the last decade to synthesize self-assembled metal–ligand cage complexes that display reactive functional groups on their interiors. This journey has taken us down a variety of research avenues, including studying the mechanism of reversible self-assembly, analyzing ligand self-sorting properties, post-assembly reactivity, molecular recognition, and binding studies, and finally reactivity and catalysis. Each of these individual topics are discussed here, as are the lessons learned along the way and the future research outlook. These self-assembled hosts are the closest mimics of enzymes to date, as they are capable of size- and shape-selective molecular recognition, substrate activation and turnover, as well as showing less common ‘biomimetic’ properties such as the ability to employ cofactors in reactivity, and alter the prevailing mechanism of the catalyzed reactions.1 Introduction2 Paddlewheels and Self-Sorting Behavior3 First-Row Transition-Metal-Mediated Assembly: Sorting and Stereochemical Control4 Post-Assembly Reactivity5 Molecular Recognition and Catalysis6 Conclusions and Outlook
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21
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22
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Abstract
We report a new class of building blocks for Dynamic Combinatorial Chemistry (DCC) based on the pyrroloindole scaffold. The attachment of l-cysteine on the α, α′ positions of the core makes the molecule suitable for disulfide exchange in aqueous dynamic combinatorial libraries (DCLs). The synthesis of the core follows a modified version of the Knoevenagel–Hemetsberger approach. The new building block (l-PI) is fluorescent (Φ = 48%) and relatively stable towards thermal and photodegradation. The chirality of the cysteine is transferred to the electron-rich pyrroloindole core. Homo- and heterochiral DCLs of l-PI with electron-deficient l- and d-naphthalenediimide (NDI) lead to similar library distributions regardless of the enantiomer used. When no salt is present, the major component is a dimer, while dimers and tetramers are obtained at increased ionic strength.
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23
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Howlader P, Zangrando E, Mukherjee PS. Self-Assembly of Enantiopure Pd12 Tetrahedral Homochiral Nanocages with Tetrazole Linkers and Chiral Recognition. J Am Chem Soc 2020; 142:9070-9078. [DOI: 10.1021/jacs.0c03551] [Citation(s) in RCA: 86] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Prodip Howlader
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore 560012, India
| | - Ennio Zangrando
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, Trieste 34127, Italy
| | - Partha Sarathi Mukherjee
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore 560012, India
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24
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Tanaka T, Sunatsuki Y, Suzuki T. Iron(II) Complexes Having Dinuclear Mesocate or Octanuclear Bicapped Trigonal Prism Structures Dependent on the Rigidity of Bis(bidentate) Schiff Base Ligands Containing Imidazole Groups. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2020. [DOI: 10.1246/bcsj.20190360] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Tsubasa Tanaka
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, Okayama 700-8530, Japan
| | - Yukinari Sunatsuki
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, Okayama 700-8530, Japan
| | - Takayoshi Suzuki
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, Okayama 700-8530, Japan
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
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25
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Zhang J, Xie S, Zi M, Yuan L. Recent advances of application of porous molecular cages for enantioselective recognition and separation. J Sep Sci 2019; 43:134-149. [DOI: 10.1002/jssc.201900762] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2019] [Revised: 09/15/2019] [Accepted: 09/27/2019] [Indexed: 12/20/2022]
Affiliation(s)
- Jun‐Hui Zhang
- Department of ChemistryYunnan Normal University Kunming P. R. China
| | - Sheng‐Ming Xie
- Department of ChemistryYunnan Normal University Kunming P. R. China
| | - Min Zi
- Department of ChemistryYunnan Normal University Kunming P. R. China
| | - Li‐Ming Yuan
- Department of ChemistryYunnan Normal University Kunming P. R. China
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26
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Wang H, Liu CH, Wang K, Wang M, Yu H, Kandapal S, Brzozowski R, Xu B, Wang M, Lu S, Hao XQ, Eswara P, Nieh MP, Cai J, Li X. Assembling Pentatopic Terpyridine Ligands with Three Types of Coordination Moieties into a Giant Supramolecular Hexagonal Prism: Synthesis, Self-Assembly, Characterization, and Antimicrobial Study. J Am Chem Soc 2019; 141:16108-16116. [PMID: 31509694 DOI: 10.1021/jacs.9b08484] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Three dimensional (3D) supramolecules with giant cavities are attractive due to their wide range of applications. Herein, we used pentatopic terpyridine ligands with three types of coordination moieties to assemble two giant supramolecular hexagonal prisms with a molecular weight up to 42 608 and 43 569 Da, respectively. Within the prisms, two double-rimmed Kandinsky Circles serve as the base surfaces as well as the templates for assisting the self-sorting during the self-assembly. Additionally, hierarchical self-assembly of these supramolecular prisms into tubular-like nanostructures was fully studied by scanning tunneling microscopy (STM) and small-angle X-ray scattering (SAXS). Finally, these supramolecular prisms show good antimicrobial activities against Gram-positive pathogen methicillin-resistant Staphylococcus aureus (MRSA) and Bacillus subtilis (B. subtilis).
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Affiliation(s)
- Heng Wang
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States
| | - Chung-Hao Liu
- Polymer Program, Institute Materials Science, Department of Chemical & Biomolecular Engineering , University of Connecticut , Storrs , Connecticut 06269 , United States
| | - Kun Wang
- Department of Mechanical Engineering , University of Michigan , Ann Arbor , Michigan 48109 , United States.,Single Molecule Study Laboratory, College of Engineering and Nanoscale Science and Engineering Center , University of Georgia , Athens , Georgia 30602 , United States
| | - Minghui Wang
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States
| | - Hao Yu
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry , Jilin University , Changchun , Jilin 130012 , China
| | - Sneha Kandapal
- Single Molecule Study Laboratory, College of Engineering and Nanoscale Science and Engineering Center , University of Georgia , Athens , Georgia 30602 , United States
| | - Robert Brzozowski
- Department of Cell Biology, Microbiology and Molecular Biology , University of South Florida , Tampa , Florida 33620 , United States
| | - Bingqian Xu
- Single Molecule Study Laboratory, College of Engineering and Nanoscale Science and Engineering Center , University of Georgia , Athens , Georgia 30602 , United States
| | - Ming Wang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry , Jilin University , Changchun , Jilin 130012 , China
| | - Shuai Lu
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States.,College of Chemistry and Molecular Engineering , Zhengzhou University , Zhengzhou , Henan 450001 , China
| | - Xin-Qi Hao
- College of Chemistry and Molecular Engineering , Zhengzhou University , Zhengzhou , Henan 450001 , China
| | - Prahathees Eswara
- Department of Cell Biology, Microbiology and Molecular Biology , University of South Florida , Tampa , Florida 33620 , United States
| | - Mu-Ping Nieh
- Polymer Program, Institute Materials Science, Department of Chemical & Biomolecular Engineering , University of Connecticut , Storrs , Connecticut 06269 , United States
| | - Jianfeng Cai
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States
| | - Xiaopeng Li
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States
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27
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Niu Z, Wang L, Fang S, Lan PC, Aguila B, Perman J, Ma JG, Cheng P, Li X, Ma S. Solvent-assisted coordination driven assembly of a supramolecular architecture featuring two types of connectivity from discrete nanocages. Chem Sci 2019; 10:6661-6665. [PMID: 31367319 PMCID: PMC6624976 DOI: 10.1039/c9sc01892a] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Accepted: 05/27/2019] [Indexed: 12/29/2022] Open
Abstract
A 3D nanocage architecture with two types of connectivity was successfully assembled from discrete supramolecular nanocages.
The rapid development of supramolecular chemistry provides a powerful bottom-up approach to construct various well-defined nano-architectures with increasing complexity and functionality. Compared to that of small and simple nanometric objects, the self-assembly of larger and more complex nanometric objects, such as nanocages, remains a significant challenge. Herein, we used a discrete nanocage as the monomer to successfully construct a novel three-dimensional (3D) supramolecular architecture, which comprises two types of nanocage building units with different connectivity, using the solvent-assisted coordination-driven assembly approach. The mechanism of this supramolecular assembly process was investigated by electrospray ionization mass spectrometry (ESI-MS) studies, which identified for the first time the formation of a nanocage dimer intermediate during the assembly process. The assembly of discrete nanocages into a 3D supramolecular architecture led to remarkable enhancement of stability and gas adsorption properties.
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Affiliation(s)
- Zheng Niu
- Department of Chemistry , University of South Florida , 4202 E. Fowler Avenue , Tampa , Florida 33620 , USA . .,Department of Chemistry , Institution Key Laboratory of Advanced Energy Materials Chemistry (MOE) , Collaborative Innovation Center of Chemical Science and Engineering , Nankai University , Tianjin 300071 , P. R. China
| | - Lei Wang
- Department of Chemistry , University of South Florida , 4202 E. Fowler Avenue , Tampa , Florida 33620 , USA .
| | - Sheng Fang
- Department of Chemistry , Institution Key Laboratory of Advanced Energy Materials Chemistry (MOE) , Collaborative Innovation Center of Chemical Science and Engineering , Nankai University , Tianjin 300071 , P. R. China
| | - Pui Ching Lan
- Department of Chemistry , University of South Florida , 4202 E. Fowler Avenue , Tampa , Florida 33620 , USA .
| | - Briana Aguila
- Department of Chemistry , University of South Florida , 4202 E. Fowler Avenue , Tampa , Florida 33620 , USA .
| | - Jason Perman
- Department of Chemistry , University of South Florida , 4202 E. Fowler Avenue , Tampa , Florida 33620 , USA .
| | - Jian-Gong Ma
- Department of Chemistry , Institution Key Laboratory of Advanced Energy Materials Chemistry (MOE) , Collaborative Innovation Center of Chemical Science and Engineering , Nankai University , Tianjin 300071 , P. R. China
| | - Peng Cheng
- Department of Chemistry , Institution Key Laboratory of Advanced Energy Materials Chemistry (MOE) , Collaborative Innovation Center of Chemical Science and Engineering , Nankai University , Tianjin 300071 , P. R. China
| | - Xiaopeng Li
- Department of Chemistry , University of South Florida , 4202 E. Fowler Avenue , Tampa , Florida 33620 , USA .
| | - Shengqian Ma
- Department of Chemistry , University of South Florida , 4202 E. Fowler Avenue , Tampa , Florida 33620 , USA .
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28
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Percástegui EG, Mosquera J, Ronson TK, Plajer AJ, Kieffer M, Nitschke JR. Waterproof architectures through subcomponent self-assembly. Chem Sci 2018; 10:2006-2018. [PMID: 30881630 PMCID: PMC6385555 DOI: 10.1039/c8sc05085f] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2018] [Accepted: 12/12/2018] [Indexed: 11/21/2022] Open
Abstract
Construction of metal–organic containers that are soluble and stable in water can be challenging – we present diverse strategies that allow the synthesis of kinetically robust water-soluble architectures via subcomponent self-assembly.
Metal–organic containers are readily prepared through self-assembly, but achieving solubility and stability in water remains challenging due to ligand insolubility and the reversible nature of the self-assembly process. Here we have developed conditions for preparing a broad range of architectures that are both soluble and kinetically stable in water through metal(ii)-templated (MII = CoII, NiII, ZnII, CdII) subcomponent self-assembly. Although these structures are composed of hydrophobic and poorly-soluble subcomponents, sulfate counterions render them water-soluble, and they remain intact indefinitely in aqueous solution. Two strategies are presented. Firstly, stability increased with metal–ligand bond strength, maximising when NiII was used as a template. Architectures that disassembled when CoII, ZnII and CdII templates were employed could be directly prepared from NiSO4 in water. Secondly, a higher density of connections between metals and ligands within a structure, considering both ligand topicity and degree of metal chelation, led to increased stability. When tritopic amines were used to build highly chelating ligands around ZnII and CdII templates, cryptate-like water-soluble structures were formed using these labile ions. Our synthetic platform provides a unified understanding of the elements of aqueous stability, allowing predictions of the stability of metal–organic cages that have not yet been prepared.
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Affiliation(s)
| | - Jesús Mosquera
- Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , UK .
| | - Tanya K Ronson
- Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , UK .
| | - Alex J Plajer
- Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , UK .
| | - Marion Kieffer
- Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , UK .
| | - Jonathan R Nitschke
- Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , UK .
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29
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Wu GY, Wang XQ, Chen LJ, Hu YX, Yin GQ, Xu L, Jiang B, Yang HB. Supramolecular Polymer Cross-Linked by Discrete Tris-[2]pseudorotaxane Metallacycles and Its Redox-Responsive Behavior. Inorg Chem 2018; 57:15414-15420. [PMID: 30521327 DOI: 10.1021/acs.inorgchem.8b02712] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A new discrete hexagonal metallacycle M containing tris-[2]pseudorotaxane moiety has been successfully designed and synthesized via coordination-driven self-assembly. The newly designed tris-[2]pseudorotaxane metallacycle was well characterized with nuclear magnetic resonance and mass spectra analysis. Such tris-[2]pseudorotaxane metallacycle M and pillar[5]arene dimer (PD) could further form a new family of cross-linked redox-responsive supramolecular polymer M⊃(PD)3 through a host-guest interaction. Interestingly, the polymer M⊃(PD)3 displayed redox-responsive behavior and showed tuned weight-average diffusion coefficients D upon redox stimuli, which is attributed to the changed coordination geometries of [Cu(phen)2]+ and [Cu(phen)2]2+ in such system.
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Affiliation(s)
- Gui-Yuan Wu
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , P. R. China
| | - Xu-Qing Wang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , P. R. China
| | - Li-Jun Chen
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , P. R. China
| | - Yi-Xiong Hu
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , P. R. China
| | - Guang-Qiang Yin
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , P. R. China
| | - Lin Xu
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , P. R. China
| | - Bo Jiang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , P. R. China
| | - Hai-Bo Yang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , P. R. China
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30
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Sun B, Nurttila SS, Reek JNH. Synthesis and Characterization of Self-Assembled Chiral Fe II 2 L 3 Cages. Chemistry 2018; 24:14693-14700. [PMID: 30025184 PMCID: PMC6175241 DOI: 10.1002/chem.201801077] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2018] [Revised: 07/16/2018] [Indexed: 11/23/2022]
Abstract
We present here the synthesis of chiral BINOL-derived (BINOL=1,1'-bi-2-naphthol) bisamine and bispyridine-aldehyde building blocks that can be used for the self-assembly of novel chiral FeII 2 L3 cages when mixed with an iron(II) precursor. The properties of a series of chiral cages were studied by NMR and circular dichroism (CD) spectroscopy, cold-spray ionization MS, and molecular modeling. Upon formation of the M2 L3 cages, the iron corners can adopt various isomeric forms: mer, fac-Δ, or fac-Λ. We found that the coordination geometry around the metal centers in R-Cages 1 and 2 were influenced by the chiral BINOL backbone only to a limited extent, as a mixture of cages was formed with fac and mer configurations at the iron corners. However, single cage species (fac-RR-Cage and fac-RS-Cage) that are enantiopure and highly symmetric were obtained by generating these chiral M2 L3 cages by using the bispyridine-aldehyde building blocks in combination with chiral amine moieties to form pyridylimine ligands for coordination to iron. Next to consistent NMR spectra, the CD spectra confirm the configurations fac-(Λ,Λ) and fac-(Δ,Δ) corresponding to RR- and RS-Cage, respectively.
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Affiliation(s)
- Bin Sun
- Homogeneous, Bioinspired and Supramolecular Catalysis, van 't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041098XHAmsterdamThe Netherlands
| | - Sandra S. Nurttila
- Homogeneous, Bioinspired and Supramolecular Catalysis, van 't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041098XHAmsterdamThe Netherlands
| | - Joost N. H. Reek
- Homogeneous, Bioinspired and Supramolecular Catalysis, van 't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041098XHAmsterdamThe Netherlands
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31
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Milo A, Pérez Temprano MH. Highlights from the 53rd EUCHEM conference on stereochemistry, Bürgenstock, Switzerland, May 2018. Chem Commun (Camb) 2018; 54:10014-10020. [PMID: 30152490 DOI: 10.1039/c8cc90368a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
When we first heard of the Bürgenstock conference it was described as a guarded meeting in a remote location, undisturbed by modern diversions, with mysterious customs and a secret handshake. All of these rumors turned out to be completely true. We arrived at an undisclosed location and three young men, who knew our names upon sight, greeted us and gave us an agenda in which we discovered the identity of the speakers, moderators and other participants. We then had a few moments to bask in their glory before being treated to a delicious dose of chemistry. During the banquet, before the first lecture, this year's president, Prof. Ilan Marek, gave the opening address from a balcony reserved only for these meetings, rumors hold that it stands vacant all year in anticipation. He mentioned several of the traditions of the meeting, which we are not allowed to share of course, and described the joy of putting together this year's exciting program with the help of an exceptional organizing committee that included Prof. Cristina Nevado, Prof. Christian Bochet, Dr Fabrice Gallou and Dr Alain De Mesmaeker. He also introduced this year's guest of honor, Prof. Yitzhak Apeloig, and wished the best luck to the current Vice President and future President, Prof. Véronique Gouverneur, not only for preparing the 54th Bürgenstock Conference, but also with her duty this year, maintaining the good weather for the whole week. Although the official title of the conference is the EUCHEM conference on stereochemistry, the topics covered span a broad range of cutting edge chemical transformations and insights, which can appeal to anyone working in chemistry and its interfaces with other disciplines. We will briefly describe each of the talks following one of our favorite citable quotes from these inspiring speakers.
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Affiliation(s)
- Anat Milo
- Department of Chemistry, Ben-Gurion University of the Negev, Beer Sheva, Israel.
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32
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Roberts DA, Pilgrim BS, Sirvinskaite G, Ronson TK, Nitschke JR. Covalent Post-assembly Modification Triggers Multiple Structural Transformations of a Tetrazine-Edged Fe4L6 Tetrahedron. J Am Chem Soc 2018; 140:9616-9623. [DOI: 10.1021/jacs.8b05082] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Derrick A. Roberts
- Department of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW Cambridge, United Kingdom
| | - Ben S. Pilgrim
- Department of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW Cambridge, United Kingdom
| | - Giedre Sirvinskaite
- Department of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW Cambridge, United Kingdom
| | - Tanya K. Ronson
- Department of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW Cambridge, United Kingdom
| | - Jonathan R. Nitschke
- Department of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW Cambridge, United Kingdom
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33
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Luis ET, Iranmanesh H, Arachchige KSA, Donald WA, Quach G, Moore EG, Beves JE. Luminescent Tetrahedral Molecular Cages Containing Ruthenium(II) Chromophores. Inorg Chem 2018; 57:8476-8486. [PMID: 29969245 DOI: 10.1021/acs.inorgchem.8b01157] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
We have designed linear metalloligands which contain a central photoactive [Ru(N∧N)3]2+ unit bordered by peripheral metal binding sites. The combination of these metalloligands with Zn(II) and Fe(II) ions leads to heterometallic tetrahedral cages, which were studied by NMR spectroscopy, mass spectrometry, and photophysical methods. Like the parent metalloligands, the cages remain emissive in solution. This approach allows direct incorporation of the favorable properties of ruthenium(II) polypyridyl complexes into larger self-assembled structures.
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Affiliation(s)
- Ena T Luis
- School of Chemistry , UNSW Sydney , Sydney , 2052 Australia
| | | | | | | | - Gina Quach
- School of Chemistry and Molecular Biosciences, the University of Queensland , Brisbane , Queensland , 4072 Australia
| | - Evan G Moore
- School of Chemistry and Molecular Biosciences, the University of Queensland , Brisbane , Queensland , 4072 Australia
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34
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Sapegin A, Krasavin M. 1,4-Diiodo-2,3,5,6-tetrafluorobenzene (DITFB) in the synthesis of polyfluorinated organic compounds. J Fluor Chem 2018. [DOI: 10.1016/j.jfluchem.2018.02.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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35
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Govindarajan R, Divya D, Nagarajaprakash R, Manimaran B. Synthesis and Characterization of Aminoquinonato Bridged Re(I)-Based Amide Functionalized Dinuclear Metallastirrups and Tetranuclear Lemniscate Metallacycles. ChemistrySelect 2018. [DOI: 10.1002/slct.201800296] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
| | - Dhanaraj Divya
- Department of Chemistry; Pondicherry University; Puducherry 605014 India
| | | | - Bala. Manimaran
- Department of Chemistry; Pondicherry University; Puducherry 605014 India
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36
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Becker S. The crystal structure of [Fe 2(PIMIC6)(AnthCO 2)(CH 3CN)]·[Fe 2(PIMIC6)(AnthCO 2)(CH 3CN) 0.9(CH 2Cl 2) 0.1]·[Fe 2(PIMIC6)(AnthCO 2)(OH 2)]·0.75CH 3CN: a crystallographer's nightmare or a fascinating case of disorder? ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2018; 74:122-131. [PMID: 29616987 DOI: 10.1107/s2052520618000689] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Accepted: 01/11/2018] [Indexed: 06/08/2023]
Abstract
Refinement of large crystal structures as well as that of disordered structures can be challenging. If both features come together, structure refinement has the potential of becoming a crystallographer's nightmare. Here, the refinement of the large and highly disordered structure of [Fe2(PIMIC6)(AnthCO2)(CH3CN)]·[Fe2(PIMIC6)(AnthCO2)(CH3CN)0.9(CH2Cl2)0.1]·[Fe2(PIMIC6)(AnthCO2)(OH2)]·0.75CH3CN [(1), PIMIC6 is a phenol-imine-based macrocycle, AnthCO2 is an anthracene acid anion] is described and discussed. A total of 5311 parameters had to be refined to generate a model that allows for 14 400 possible arrangements of (1) in the asymmetric unit, making this structure one of the most complex structures in the Cambridge Structural Database to date. All disorders are exceptionally well resolved and exhaustive parameterizing affords a refinement model that is unique with respect to the detail of disorder refinement.
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Affiliation(s)
- Sabine Becker
- Fachbereich Chemie, Technische Universität Kaiserslautern, Erwin-Schrödinger-Straße 54/684, Kaiserslautern, 67663, Germany
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37
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Bogie PM, Holloway LR, Lyon Y, Onishi NC, Beran GJO, Julian RR, Hooley RJ. A Springloaded Metal-Ligand Mesocate Allows Access to Trapped Intermediates of Self-Assembly. Inorg Chem 2018; 57:4155-4163. [DOI: 10.1021/acs.inorgchem.8b00370] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Paul M. Bogie
- Department of Chemistry, University of California-Riverside, Riverside, California 92521, United States
| | - Lauren R. Holloway
- Department of Chemistry, University of California-Riverside, Riverside, California 92521, United States
| | - Yana Lyon
- Department of Chemistry, University of California-Riverside, Riverside, California 92521, United States
| | - Nicole C. Onishi
- Department of Chemistry, University of California-Riverside, Riverside, California 92521, United States
| | - Gregory J. O. Beran
- Department of Chemistry, University of California-Riverside, Riverside, California 92521, United States
| | - Ryan R. Julian
- Department of Chemistry, University of California-Riverside, Riverside, California 92521, United States
| | - Richard J. Hooley
- Department of Chemistry, University of California-Riverside, Riverside, California 92521, United States
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38
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Wang Y, Fang H, Zhang W, Zhuang Y, Tian Z, Cao X. Interconversion of molecular face-rotating polyhedra through turning inside out. Chem Commun (Camb) 2018. [PMID: 28650011 DOI: 10.1039/c7cc04159d] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report the post-synthesis interconversion of two enantiomeric organic cages through turning inside out. By scrutinizing the thermodynamics and kinetics, we are able to control the racemization rate by various reaction conditions and reveal that the turning-inside-out interconversion is realized through a partial disassembly pathway. The kinetics investigation also provides insight into the dynamic essence of imine chemistry using different solvents and catalysts.
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Affiliation(s)
- Yu Wang
- State Key Laboratory of Physical Chemistry of Solid Surfaces, iChEM and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.
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39
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Tateishi T, Kojima T, Hiraoka S. Multiple Pathways in the Self-Assembly Process of a Pd 4L 8 Coordination Tetrahedron. Inorg Chem 2018; 57:2686-2694. [PMID: 29469572 DOI: 10.1021/acs.inorgchem.7b03085] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The self-assembly of a Pd418 coordination tetrahedron (Tet) from a ditopic ligand, 1, and palladium(II) ions, [PdPy*4]2+ (Py* = 3-chloropyridine), was investigated by a 1H NMR-based quantitative approach (quantitative analysis of self-assembly process, QASAP), which allows one to monitor the average composition of the intermediates not observed by NMR spectroscopy. The self-assembly of Tet takes place mainly through three pathways and about half of the Tet structures were produced through the reaction of a kinetically produced Pd3L6 double-walled triangle (DWT) and 200-nm-sized large intermediates (IntL). In two of the three pathways, the leaving ligand (Py*), which is not a component of Tet, catalytically assisted the self-assembly. Such a multiplicity of the self-assembly process of Tet suggests that molecular self-assembly takes place on an energy landscape like a protein-folding funnel.
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Affiliation(s)
- Tomoki Tateishi
- Department of Basic Science, Graduate School of Arts and Sciences , The University of Tokyo , 3-8-1 Komaba, Meguro-ku , Tokyo 153-8902 , Japan
| | - Tatsuo Kojima
- Department of Basic Science, Graduate School of Arts and Sciences , The University of Tokyo , 3-8-1 Komaba, Meguro-ku , Tokyo 153-8902 , Japan
| | - Shuichi Hiraoka
- Department of Basic Science, Graduate School of Arts and Sciences , The University of Tokyo , 3-8-1 Komaba, Meguro-ku , Tokyo 153-8902 , Japan
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40
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Bravin C, Badetti E, Puttreddy R, Pan F, Rissanen K, Licini G, Zonta C. Binding Profiles of Self-Assembled Supramolecular Cages from ESI-MS Based Methodology. Chemistry 2018; 24:2936-2943. [DOI: 10.1002/chem.201704725] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2017] [Indexed: 12/21/2022]
Affiliation(s)
- Carlo Bravin
- Department of Chemical Sciences; University of Padova; via Marzolo 1 35131 Padova (PD) Italy
| | - Elena Badetti
- Department of Chemical Sciences; University of Padova; via Marzolo 1 35131 Padova (PD) Italy
| | - Rakesh Puttreddy
- Nanoscience Center; Department of Chemistry; University of Jyvaskyla; P.O. Box 35 40014 Jyvaskyla Finland
| | - Fangfang Pan
- Nanoscience Center; Department of Chemistry; University of Jyvaskyla; P.O. Box 35 40014 Jyvaskyla Finland
| | - Kari Rissanen
- Nanoscience Center; Department of Chemistry; University of Jyvaskyla; P.O. Box 35 40014 Jyvaskyla Finland
| | - Giulia Licini
- Department of Chemical Sciences; University of Padova; via Marzolo 1 35131 Padova (PD) Italy
| | - Cristiano Zonta
- Department of Chemical Sciences; University of Padova; via Marzolo 1 35131 Padova (PD) Italy
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41
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Rizzuto FJ, Kieffer M, Nitschke JR. Quantified structural speciation in self-sorted CoII6L 4 cage systems. Chem Sci 2018; 9:1925-1930. [PMID: 29719682 PMCID: PMC5894586 DOI: 10.1039/c7sc04927g] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2017] [Accepted: 01/10/2018] [Indexed: 01/04/2023] Open
Abstract
The molecular components of biological systems self-sort in different ways to function cooperatively and to avoid interfering with each other. Understanding the driving forces behind these different sorting modes enables progressively more complex self-assembling synthetic systems to be designed. Here we show that subtle ligand differences engender distinct M6L4 cage geometries - an S4-symmetric scalenohedron, or pseudo-octahedra having T point symmetry. When two different ligands were simultaneously employed during self-assembly, a mixture of homo- and heteroleptic cages was generated. Each set of product structures represents a unique sorting regime: biases toward specific geometries, preferential incorporation of one ligand over another, and the amplification of homoleptic products were all observed. The ligands' geometries, electronic properties, and flexibility were found to influence the sorting regime adopted, together with templation effects. A new method of using mass spectrometry to quantitatively analyse mixtures of self-sorted assemblies was developed to assess individual outcomes. Product distributions in complex, dynamic mixtures were thus quantified by non-chromatographic methods.
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Affiliation(s)
- Felix J Rizzuto
- Department of Chemistry , University of Cambridge , Lensfield Road , UK CB2 1EW .
| | - Marion Kieffer
- Department of Chemistry , University of Cambridge , Lensfield Road , UK CB2 1EW .
| | - Jonathan R Nitschke
- Department of Chemistry , University of Cambridge , Lensfield Road , UK CB2 1EW .
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42
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Gimeno N, Bijani C, Gouygou M, Volkman J. Coordination-driven self-assembly of chiral palladium(ii)-based supramolecular triangle structures. NEW J CHEM 2018. [DOI: 10.1039/c8nj02804d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Chiral structures of palladium(ii)-based triangular supramolecular complexes, with achiral corners and edges, have been characterized in solution.
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43
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Luo D, Wang XZ, Yang C, Zhou XP, Li D. Self-Assembly of Chiral Metal–Organic Tetartoid. J Am Chem Soc 2017; 140:118-121. [DOI: 10.1021/jacs.7b11285] [Citation(s) in RCA: 76] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Dong Luo
- College
of Chemistry and Materials Science, Jinan University, Guangzhou 510632, P. R. China
| | - Xue-Zhi Wang
- Department
of Chemistry, Shantou University, Guangdong 515063, P. R. China
| | - Chen Yang
- Department
of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China
| | - Xiao-Ping Zhou
- Department
of Chemistry, Shantou University, Guangdong 515063, P. R. China
| | - Dan Li
- College
of Chemistry and Materials Science, Jinan University, Guangzhou 510632, P. R. China
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44
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Haynes CJE, Zhu J, Chimerel C, Hernández-Ainsa S, Riddell IA, Ronson TK, Keyser UF, Nitschke JR. Blockable Zn10
L15
Ion Channels through Subcomponent Self-Assembly. Angew Chem Int Ed Engl 2017; 56:15388-15392. [DOI: 10.1002/anie.201709544] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2017] [Indexed: 12/20/2022]
Affiliation(s)
- Cally J. E. Haynes
- Department of Chemistry; University of Cambridge; Lensfield Road Cambridge CB2 1EW UK
| | - Jinbo Zhu
- Cavendish Laboratory; University of Cambridge; JJ Thompson Avenue Cambridge CB3 0HE UK
| | - Catalin Chimerel
- Cavendish Laboratory; University of Cambridge; JJ Thompson Avenue Cambridge CB3 0HE UK
| | | | - Imogen A. Riddell
- Department of Chemistry; University of Cambridge; Lensfield Road Cambridge CB2 1EW UK
- Current address: School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Tanya K. Ronson
- Department of Chemistry; University of Cambridge; Lensfield Road Cambridge CB2 1EW UK
| | - Ulrich F. Keyser
- Cavendish Laboratory; University of Cambridge; JJ Thompson Avenue Cambridge CB3 0HE UK
| | - Jonathan R. Nitschke
- Department of Chemistry; University of Cambridge; Lensfield Road Cambridge CB2 1EW UK
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45
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Haynes CJE, Zhu J, Chimerel C, Hernández-Ainsa S, Riddell IA, Ronson TK, Keyser UF, Nitschke JR. Blockable Zn10
L15
Ion Channels through Subcomponent Self-Assembly. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201709544] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Cally J. E. Haynes
- Department of Chemistry; University of Cambridge; Lensfield Road Cambridge CB2 1EW UK
| | - Jinbo Zhu
- Cavendish Laboratory; University of Cambridge; JJ Thompson Avenue Cambridge CB3 0HE UK
| | - Catalin Chimerel
- Cavendish Laboratory; University of Cambridge; JJ Thompson Avenue Cambridge CB3 0HE UK
| | | | - Imogen A. Riddell
- Department of Chemistry; University of Cambridge; Lensfield Road Cambridge CB2 1EW UK
- Current address: School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Tanya K. Ronson
- Department of Chemistry; University of Cambridge; Lensfield Road Cambridge CB2 1EW UK
| | - Ulrich F. Keyser
- Cavendish Laboratory; University of Cambridge; JJ Thompson Avenue Cambridge CB3 0HE UK
| | - Jonathan R. Nitschke
- Department of Chemistry; University of Cambridge; Lensfield Road Cambridge CB2 1EW UK
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46
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Saha R, Samanta D, Bhattacharyya AJ, Mukherjee PS. Stepwise Construction of Self-Assembled Heterometallic Cages Showing High Proton Conductivity. Chemistry 2017; 23:8980-8986. [DOI: 10.1002/chem.201701596] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2017] [Indexed: 01/01/2023]
Affiliation(s)
- Rupak Saha
- Inorganic and Physical Chemistry Department; Indian Institute of Science; Bangalore- 560012 India
| | - Dipak Samanta
- Inorganic and Physical Chemistry Department; Indian Institute of Science; Bangalore- 560012 India
| | | | - Partha Sarathi Mukherjee
- Inorganic and Physical Chemistry Department; Indian Institute of Science; Bangalore- 560012 India
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47
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Zhang D, Cochrane JR, Di Pietro S, Guy L, Gornitzka H, Dutasta JP, Martinez A. "Breathing" Motion of a Modulable Molecular Cavity. Chemistry 2017; 23:6495-6498. [PMID: 28158931 DOI: 10.1002/chem.201700395] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2017] [Indexed: 01/18/2023]
Abstract
A class of hemicryptophane cages that adopt imploded conformations in solution and in the solid state has been described and studied by NMR spectroscopy and X-ray crystallography. It is reported that the degree of collapse of the molecular cavity can be controlled by changing the stereochemistry of the chiral elements of the hemicryptophanes, leading to a modulation of their physical and chemical properties. Upon the binding of an oxidovanadium unit, the collapsed molecular cavity can inflate to give an expanded conformation. Removal of the vanadium core by an ancillary complexing ligand restores the initial folded structure. Thus, coordination/de-coordination of the metal ion controls the dynamic motions of the cage, leading to a reversible nanomechanical process. This controlled motion between a collapsed and expanded cavity can be seen as that of a breathable molecular cage.
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Affiliation(s)
- Dawei Zhang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, 200062, Shanghai, P. R. China.,Laboratoire de Chimie, École Normale Supérieure de Lyon, CNRS, UCBL, 46 allée d'Italie, 69364, Lyon, France
| | - James Robert Cochrane
- Laboratoire de Chimie, École Normale Supérieure de Lyon, CNRS, UCBL, 46 allée d'Italie, 69364, Lyon, France
| | - Sebastiano Di Pietro
- Laboratoire de Chimie, École Normale Supérieure de Lyon, CNRS, UCBL, 46 allée d'Italie, 69364, Lyon, France
| | - Laure Guy
- Laboratoire de Chimie, École Normale Supérieure de Lyon, CNRS, UCBL, 46 allée d'Italie, 69364, Lyon, France
| | - Heinz Gornitzka
- Laboratoire de Chimie de Coordination, CNRS, 205 Route de Narbonne, BP 44099, Université de Toulouse, UPS, INPT, 31077, Toulouse, Cedex 4, France
| | - Jean-Pierre Dutasta
- Laboratoire de Chimie, École Normale Supérieure de Lyon, CNRS, UCBL, 46 allée d'Italie, 69364, Lyon, France
| | - Alexandre Martinez
- Laboratoire de Chimie, École Normale Supérieure de Lyon, CNRS, UCBL, 46 allée d'Italie, 69364, Lyon, France.,Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, Marseille, France
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48
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Roy B, Saha R, Ghosh AK, Patil Y, Mukherjee PS. Versatility of Two Diimidazole Building Blocks in Coordination-Driven Self-Assembly. Inorg Chem 2017; 56:3579-3588. [DOI: 10.1021/acs.inorgchem.7b00037] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Bijan Roy
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India
| | - Rupak Saha
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India
| | - Aloke Kumar Ghosh
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India
| | - Yogesh Patil
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India
| | - Partha Sarathi Mukherjee
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India
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49
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Grommet AB, Nitschke JR. Directed Phase Transfer of an FeII4L4 Cage and Encapsulated Cargo. J Am Chem Soc 2017; 139:2176-2179. [DOI: 10.1021/jacs.6b12811] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Angela B. Grommet
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, United Kingdom
| | - Jonathan R. Nitschke
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, United Kingdom
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50
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Prakasam T, Bilbeisi RA, El-Khoury R, Charbonnière LJ, Elhabiri M, Esposito G, Olsen JC, Trabolsi A. Topological transformation of a trefoil knot into a [2]catenane. Dalton Trans 2017; 46:16474-16479. [DOI: 10.1039/c7dt03582a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Kinetic and thermodynamic investigation of topological transformation of a trefoil knot into a [2]catenane in water.
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Affiliation(s)
- Thirumurugan Prakasam
- New York University Abu Dhabi (NYUAD)
- Experimental Research Building
- Abu Dhabi
- United Arab Emirates
| | - Rana A. Bilbeisi
- American University of Beirut
- Department of Civil and Environmental Engineering (CEE)
- Faculty of Engineering and Architecture (FEA)
- Beirut
- Lebanon
| | - Roberto El-Khoury
- New York University Abu Dhabi (NYUAD)
- Experimental Research Building
- Abu Dhabi
- United Arab Emirates
| | - Loïc J. Charbonnière
- Laboratoire d'Ingénierie Moléculaire Appliquée á l'Analyse
- IPHC UMR 7178 CNRS-Université de Strasbourg
- ECPM
- 67087 Strasbourg
- France
| | - Mourad Elhabiri
- Laboratoire de Chimie Bioorganique et Médicinale
- UMR 7509 CNRS-Université de Strasbourg
- ECPM
- 67087 Strasbourg
- France
| | - Gennaro Esposito
- New York University Abu Dhabi (NYUAD)
- Experimental Research Building
- Abu Dhabi
- United Arab Emirates
- DMIF
| | - John-Carl Olsen
- Department of Chemistry
- RC Box 270216
- University of Rochester
- Rochester
- USA
| | - Ali Trabolsi
- New York University Abu Dhabi (NYUAD)
- Experimental Research Building
- Abu Dhabi
- United Arab Emirates
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