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For: Zhao M, Xue K, Wang F, Liu S, Bai S, Sun B, Zhou J, Yang Y. Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping. ISME J 2014;8:2045-55. [PMID: 24694714 DOI: 10.1038/ismej.2014.46] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2013] [Revised: 02/27/2014] [Accepted: 03/02/2014] [Indexed: 11/08/2022]
Number Cited by Other Article(s)
1
Du J, Gao Q, Sun F, Liu B, Jiao Y, Liu Q. Agricultural soil microbiomes at the climate frontier: Nutrient-mediated adaptation strategies for sustainable farming. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2025;295:118161. [PMID: 40203703 DOI: 10.1016/j.ecoenv.2025.118161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2024] [Revised: 03/27/2025] [Accepted: 04/06/2025] [Indexed: 04/11/2025]
2
Francis Justine M, Kaiwen P, Tadesse Z, Hongyan Z, Lin Z. Cooling has stimulated soil carbon storage in forest ecosystems. ENVIRONMENTAL RESEARCH 2024;245:118012. [PMID: 38154564 DOI: 10.1016/j.envres.2023.118012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 11/14/2023] [Accepted: 12/21/2023] [Indexed: 12/30/2023]
3
Li S, Zhong L, Zhang B, Fan C, Gao Y, Wang M, Xiao H, Tang X. Microplastics induced the differential responses of microbial-driven soil carbon and nitrogen cycles under warming. JOURNAL OF HAZARDOUS MATERIALS 2024;465:133141. [PMID: 38056262 DOI: 10.1016/j.jhazmat.2023.133141] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Revised: 11/27/2023] [Accepted: 11/28/2023] [Indexed: 12/08/2023]
4
Zhang X, Feng Q, Cao J, Liu W, Qin Y, Zhu M, Han T. Grazing practices affect soil microbial networks but not diversity and composition in alpine meadows of northeastern Qinghai-Tibetan plateau. ENVIRONMENTAL RESEARCH 2023;235:116656. [PMID: 37451580 DOI: 10.1016/j.envres.2023.116656] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Revised: 07/04/2023] [Accepted: 07/11/2023] [Indexed: 07/18/2023]
5
Fu F, Li J, Li Y, Chen W, Ding H, Xiao S. Simulating the effect of climate change on soil microbial community in an Abies georgei var. smithii forest. Front Microbiol 2023;14:1189859. [PMID: 37333631 PMCID: PMC10272780 DOI: 10.3389/fmicb.2023.1189859] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Accepted: 05/11/2023] [Indexed: 06/20/2023]  Open
6
Medriano CA, Chan A, De Sotto R, Bae S. Different types of land use influence soil physiochemical properties, the abundance of nitrifying bacteria, and microbial interactions in tropical urban soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023;869:161722. [PMID: 36690092 DOI: 10.1016/j.scitotenv.2023.161722] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2022] [Revised: 01/13/2023] [Accepted: 01/16/2023] [Indexed: 06/17/2023]
7
Insights into Bacterial Communities and Diversity of Mangrove Forest Soils along the Upper Gulf of Thailand in Response to Environmental Factors. BIOLOGY 2022;11:biology11121787. [PMID: 36552296 PMCID: PMC9775068 DOI: 10.3390/biology11121787] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Revised: 11/29/2022] [Accepted: 11/30/2022] [Indexed: 12/13/2022]
8
Niu T, Xie J, Li J, Zhang J, Zhang X, Ma H, Wang C. Response of rhizosphere microbial community of Chinese chives under different fertilization treatments. Front Microbiol 2022;13:1031624. [PMID: 36478855 PMCID: PMC9719922 DOI: 10.3389/fmicb.2022.1031624] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Accepted: 11/02/2022] [Indexed: 09/29/2023]  Open
9
Yu H, Le Roux JJ, Zhao M, Li W. Mikania sesquiterpene lactones enhance soil bacterial diversity and fungal and bacterial activities. Biol Invasions 2022. [DOI: 10.1007/s10530-022-02907-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
10
Ma X, Wang T, Shi Z, Chiariello NR, Docherty K, Field CB, Gutknecht J, Gao Q, Gu Y, Guo X, Hungate BA, Lei J, Niboyet A, Le Roux X, Yuan M, Yuan T, Zhou J, Yang Y. Long-term nitrogen deposition enhances microbial capacities in soil carbon stabilization but reduces network complexity. MICROBIOME 2022;10:112. [PMID: 35902889 PMCID: PMC9330674 DOI: 10.1186/s40168-022-01309-9] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Accepted: 06/20/2022] [Indexed: 06/15/2023]
11
Soil Slope Exposure Affects Physico-Chemical and Microbiological Properties in Soil Aggregate Size Fractions. LAND 2022. [DOI: 10.3390/land11050750] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
12
Soil pH Filters the Association Patterns of Aluminum-Tolerant Microorganisms in Rice Paddies. mSystems 2022;7:e0102221. [PMID: 35166564 PMCID: PMC8845571 DOI: 10.1128/msystems.01022-21] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]  Open
13
Hu Y, Jiang H, Chen Y, Wang Z, Yan Y, Sun P, Lu X. Nitrogen addition altered the microbial functional potentials of carbon and nitrogen transformation in alpine steppe soils on the Tibetan Plateau. Glob Ecol Conserv 2021. [DOI: 10.1016/j.gecco.2021.e01937] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]  Open
14
Liu Y, Patko D, Engelhardt I, George TS, Stanley-Wall NR, Ladmiral V, Ameduri B, Daniell TJ, Holden N, MacDonald MP, Dupuy LX. Plant-environment microscopy tracks interactions of Bacillus subtilis with plant roots across the entire rhizosphere. Proc Natl Acad Sci U S A 2021;118:e2109176118. [PMID: 34819371 PMCID: PMC8640753 DOI: 10.1073/pnas.2109176118] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/05/2021] [Indexed: 11/18/2022]  Open
15
Zhang C, Jiao S, Shu D, Wei G. Inter-phylum negative interactions affect soil bacterial community dynamics and functions during soybean development under long-term nitrogen fertilization. STRESS BIOLOGY 2021;1:15. [PMID: 37676329 PMCID: PMC10441860 DOI: 10.1007/s44154-021-00015-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 11/14/2021] [Indexed: 09/08/2023]
16
Yang Y. Emerging Patterns of Microbial Functional Traits. Trends Microbiol 2021;29:874-882. [PMID: 34030967 DOI: 10.1016/j.tim.2021.04.004] [Citation(s) in RCA: 49] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Revised: 04/21/2021] [Accepted: 04/22/2021] [Indexed: 01/03/2023]
17
Li Y, Ge Y, Wang J, Shen C, Wang J, Liu YJ. Functional redundancy and specific taxa modulate the contribution of prokaryotic diversity and composition to multifunctionality. Mol Ecol 2021;30:2915-2930. [PMID: 33905157 DOI: 10.1111/mec.15935] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 04/20/2021] [Accepted: 04/21/2021] [Indexed: 12/29/2022]
18
Microbial metabolism and necromass mediated fertilization effect on soil organic carbon after long-term community incubation in different climates. ISME JOURNAL 2021;15:2561-2573. [PMID: 33712697 DOI: 10.1038/s41396-021-00950-w] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Accepted: 02/23/2021] [Indexed: 11/08/2022]
19
Gao Y, Ding J, Yuan M, Chiariello N, Docherty K, Field C, Gao Q, Gu B, Gutknecht J, Hungate BA, Le Roux X, Niboyet A, Qi Q, Shi Z, Zhou J, Yang Y. Long-term warming in a Mediterranean-type grassland affects soil bacterial functional potential but not bacterial taxonomic composition. NPJ Biofilms Microbiomes 2021;7:17. [PMID: 33558544 PMCID: PMC7870951 DOI: 10.1038/s41522-021-00187-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2019] [Accepted: 01/07/2021] [Indexed: 12/12/2022]  Open
20
Li X, Song Y, Bian Y, Gu C, Yang X, Wang F, Jiang X. Insights into the mechanisms underlying efficient Rhizodegradation of PAHs in biochar-amended soil: From microbial communities to soil metabolomics. ENVIRONMENT INTERNATIONAL 2020;144:105995. [PMID: 32758715 DOI: 10.1016/j.envint.2020.105995] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Revised: 06/08/2020] [Accepted: 07/16/2020] [Indexed: 05/15/2023]
21
Lohmann P, Benk S, Gleixner G, Potthast K, Michalzik B, Jehmlich N, von Bergen M. Seasonal Patterns of Dominant Microbes Involved in Central Nutrient Cycles in the Subsurface. Microorganisms 2020;8:E1694. [PMID: 33143231 PMCID: PMC7716230 DOI: 10.3390/microorganisms8111694] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Revised: 10/23/2020] [Accepted: 10/29/2020] [Indexed: 01/08/2023]  Open
22
Rodriguez R, Durán P. Natural Holobiome Engineering by Using Native Extreme Microbiome to Counteract the Climate Change Effects. Front Bioeng Biotechnol 2020;8:568. [PMID: 32582678 PMCID: PMC7287022 DOI: 10.3389/fbioe.2020.00568] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2020] [Accepted: 05/11/2020] [Indexed: 12/14/2022]  Open
23
Soil bacterial diversity correlates with precipitation and soil pH in long-term maize cropping systems. Sci Rep 2020;10:6012. [PMID: 32265458 PMCID: PMC7138807 DOI: 10.1038/s41598-020-62919-7] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Accepted: 03/09/2020] [Indexed: 11/25/2022]  Open
24
Soil Microbial Community Assembly and Interactions Are Constrained by Nitrogen and Phosphorus in Broadleaf Forests of Southern China. FORESTS 2020. [DOI: 10.3390/f11030285] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
25
Liang Y, Xiao X, Nuccio EE, Yuan M, Zhang N, Xue K, Cohan FM, Zhou J, Sun B. Differentiation strategies of soil rare and abundant microbial taxa in response to changing climatic regimes. Environ Microbiol 2020;22:1327-1340. [PMID: 32067386 DOI: 10.1111/1462-2920.14945] [Citation(s) in RCA: 122] [Impact Index Per Article: 24.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Revised: 02/10/2020] [Accepted: 02/14/2020] [Indexed: 01/14/2023]
26
Bin Jang H, Bolduc B, Zablocki O, Kuhn JH, Roux S, Adriaenssens EM, Brister JR, Kropinski AM, Krupovic M, Lavigne R, Turner D, Sullivan MB. Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks. Nat Biotechnol 2019;37:632-639. [PMID: 31061483 DOI: 10.1038/s41587-019-0100-8] [Citation(s) in RCA: 524] [Impact Index Per Article: 87.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Accepted: 03/11/2019] [Indexed: 01/03/2023]
27
Zhao M, Sun B, Wu L, Wang F, Wen C, Wang M, Liang Y, Hale L, Zhou J, Yang Y. Dissimilar responses of fungal and bacterial communities to soil transplantation simulating abrupt climate changes. Mol Ecol 2019;28:1842-1856. [DOI: 10.1111/mec.15053] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Revised: 02/02/2019] [Accepted: 02/11/2019] [Indexed: 12/12/2022]
28
Wang PH, Correia K, Ho HC, Venayak N, Nemr K, Flick R, Mahadevan R, Edwards EA. An interspecies malate-pyruvate shuttle reconciles redox imbalance in an anaerobic microbial community. ISME JOURNAL 2019;13:1042-1055. [PMID: 30607026 DOI: 10.1038/s41396-018-0333-4] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Revised: 11/26/2018] [Accepted: 11/29/2018] [Indexed: 11/09/2022]
29
Xu H, Lin C, Chen W, Shen Z, Liu Z, Chen T, Wang Y, Li Y, Lu C, Luo J. Effects of pipe material on nitrogen transformation, microbial communities and functional genes in raw water transportation. WATER RESEARCH 2018;143:188-197. [PMID: 29957407 DOI: 10.1016/j.watres.2018.06.040] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2018] [Revised: 06/15/2018] [Accepted: 06/17/2018] [Indexed: 06/08/2023]
30
Albright MBN, Johansen R, Lopez D, Gallegos-Graves LV, Steven B, Kuske CR, Dunbar J. Short-Term Transcriptional Response of Microbial Communities to Nitrogen Fertilization in a Pine Forest Soil. Appl Environ Microbiol 2018;84:e00598-18. [PMID: 29802185 PMCID: PMC6052259 DOI: 10.1128/aem.00598-18] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2018] [Accepted: 05/15/2018] [Indexed: 01/05/2023]  Open
31
Wang M, Ding J, Sun B, Zhang J, Wyckoff KN, Yue H, Zhao M, Liang Y, Wang X, Wen C, Zhou J, Yang Y. Microbial responses to inorganic nutrient amendment overridden by warming: Consequences on soil carbon stability. Environ Microbiol 2018;20:2509-2522. [PMID: 30051561 DOI: 10.1111/1462-2920.14239] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2017] [Revised: 04/03/2018] [Accepted: 04/06/2018] [Indexed: 11/26/2022]
32
Zou W, Wang Z, Song Q, Tang S, Peng Y. Recruitment-promoting of dormant Microcystis aeruginosa by three benthic bacterial species. HARMFUL ALGAE 2018;77:18-28. [PMID: 30005799 DOI: 10.1016/j.hal.2018.05.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2017] [Revised: 04/27/2018] [Accepted: 05/24/2018] [Indexed: 06/08/2023]
33
Zeng J, Shen JP, Wang JT, Hu HW, Zhang CJ, Bai R, Zhang LM, He JZ. Impacts of Projected Climate Warming and Wetting on Soil Microbial Communities in Alpine Grassland Ecosystems of the Tibetan Plateau. MICROBIAL ECOLOGY 2018;75:1009-1023. [PMID: 29124311 DOI: 10.1007/s00248-017-1098-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Accepted: 10/24/2017] [Indexed: 06/07/2023]
34
Yang Z, Yang S, Van Nostrand JD, Zhou J, Fang W, Qi Q, Liu Y, Wullschleger SD, Liang L, Graham DE, Yang Y, Gu B. Microbial Community and Functional Gene Changes in Arctic Tundra Soils in a Microcosm Warming Experiment. Front Microbiol 2017;8:1741. [PMID: 28974946 PMCID: PMC5610689 DOI: 10.3389/fmicb.2017.01741] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2017] [Accepted: 08/25/2017] [Indexed: 11/24/2022]  Open
35
Escalas A, Troussellier M, Yuan T, Bouvier T, Bouvier C, Mouchet MA, Flores Hernandez D, Ramos Miranda J, Zhou J, Mouillot D. Functional diversity and redundancy across fish gut, sediment and water bacterial communities. Environ Microbiol 2017;19:3268-3282. [PMID: 28618142 DOI: 10.1111/1462-2920.13822] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2016] [Accepted: 06/07/2017] [Indexed: 11/26/2022]
36
Ma X, Zhao C, Gao Y, Liu B, Wang T, Yuan T, Hale L, Nostrand JDV, Wan S, Zhou J, Yang Y. Divergent taxonomic and functional responses of microbial communities to field simulation of aeolian soil erosion and deposition. Mol Ecol 2017;26:4186-4196. [PMID: 28570016 DOI: 10.1111/mec.14194] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2016] [Revised: 04/10/2017] [Accepted: 05/15/2017] [Indexed: 01/09/2023]
37
Qi Q, Zhao M, Wang S, Ma X, Wang Y, Gao Y, Lin Q, Li X, Gu B, Li G, Zhou J, Yang Y. The Biogeographic Pattern of Microbial Functional Genes along an Altitudinal Gradient of the Tibetan Pasture. Front Microbiol 2017;8:976. [PMID: 28659870 PMCID: PMC5468456 DOI: 10.3389/fmicb.2017.00976] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2017] [Accepted: 05/15/2017] [Indexed: 01/30/2023]  Open
38
Fang L, Wang M, Cai L, Cang L. Deciphering biodegradable chelant-enhanced phytoremediation through microbes and nitrogen transformation in contaminated soils. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2017;24:14627-14636. [PMID: 28452034 DOI: 10.1007/s11356-017-9029-y] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2017] [Accepted: 04/11/2017] [Indexed: 06/07/2023]
39
Bacterial community and arsenic functional genes diversity in arsenic contaminated soils from different geographic locations. PLoS One 2017;12:e0176696. [PMID: 28475654 PMCID: PMC5419559 DOI: 10.1371/journal.pone.0176696] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Accepted: 04/14/2017] [Indexed: 11/19/2022]  Open
40
The Composition and Spatial Patterns of Bacterial Virulence Factors and Antibiotic Resistance Genes in 19 Wastewater Treatment Plants. PLoS One 2016;11:e0167422. [PMID: 27907117 PMCID: PMC5132249 DOI: 10.1371/journal.pone.0167422] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2016] [Accepted: 11/14/2016] [Indexed: 11/19/2022]  Open
41
Jie S, Li M, Gan M, Zhu J, Yin H, Liu X. Microbial functional genes enriched in the Xiangjiang River sediments with heavy metal contamination. BMC Microbiol 2016;16:179. [PMID: 27502206 PMCID: PMC4976514 DOI: 10.1186/s12866-016-0800-x] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2015] [Accepted: 08/04/2016] [Indexed: 11/10/2022]  Open
42
Zonal Soil Type Determines Soil Microbial Responses to Maize Cropping and Fertilization. mSystems 2016;1:mSystems00075-16. [PMID: 27822546 PMCID: PMC5069962 DOI: 10.1128/msystems.00075-16] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2016] [Accepted: 06/16/2016] [Indexed: 11/20/2022]  Open
43
Le Roux X, Bouskill NJ, Niboyet A, Barthes L, Dijkstra P, Field CB, Hungate BA, Lerondelle C, Pommier T, Tang J, Terada A, Tourna M, Poly F. Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach. Front Microbiol 2016;7:628. [PMID: 27242680 PMCID: PMC4868854 DOI: 10.3389/fmicb.2016.00628] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2016] [Accepted: 04/18/2016] [Indexed: 12/21/2022]  Open
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Freedman ZB, Upchurch RA, Zak DR, Cline LC. Anthropogenic N Deposition Slows Decay by Favoring Bacterial Metabolism: Insights from Metagenomic Analyses. Front Microbiol 2016;7:259. [PMID: 26973633 PMCID: PMC4773658 DOI: 10.3389/fmicb.2016.00259] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2015] [Accepted: 02/16/2016] [Indexed: 12/03/2022]  Open
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Zhang M, Xu Z, Teng Y, Christie P, Wang J, Ren W, Luo Y, Li Z. Non-target effects of repeated chlorothalonil application on soil nitrogen cycling: The key functional gene study. THE SCIENCE OF THE TOTAL ENVIRONMENT 2016;543:636-643. [PMID: 26613517 DOI: 10.1016/j.scitotenv.2015.11.053] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2015] [Revised: 11/10/2015] [Accepted: 11/10/2015] [Indexed: 05/20/2023]
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Liang Y, Jiang Y, Wang F, Wen C, Deng Y, Xue K, Qin Y, Yang Y, Wu L, Zhou J, Sun B. Long-term soil transplant simulating climate change with latitude significantly alters microbial temporal turnover. THE ISME JOURNAL 2015;9:2561-72. [PMID: 25989371 PMCID: PMC4817637 DOI: 10.1038/ismej.2015.78] [Citation(s) in RCA: 97] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/30/2014] [Revised: 03/27/2015] [Accepted: 04/13/2015] [Indexed: 01/27/2023]
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Li J, Zhang J, Liu L, Fan Y, Li L, Yang Y, Lu Z, Zhang X. Annual periodicity in planktonic bacterial and archaeal community composition of eutrophic Lake Taihu. Sci Rep 2015;5:15488. [PMID: 26503553 PMCID: PMC4621408 DOI: 10.1038/srep15488] [Citation(s) in RCA: 54] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2015] [Accepted: 09/28/2015] [Indexed: 02/06/2023]  Open
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Wang M, Liu S, Wang F, Sun B, Zhou J, Yang Y. Microbial responses to southward and northward Cambisol soil transplant. Microbiologyopen 2015;4:931-40. [PMID: 26503228 PMCID: PMC4694145 DOI: 10.1002/mbo3.302] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2015] [Revised: 08/25/2015] [Accepted: 09/04/2015] [Indexed: 11/27/2022]  Open
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GeoChip profiling of microbial community in response to global changes simulated by soil transplant and cropping. GENOMICS DATA 2015;2:166-9. [PMID: 26484087 PMCID: PMC4535839 DOI: 10.1016/j.gdata.2014.06.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2014] [Accepted: 06/03/2014] [Indexed: 11/20/2022]
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Ding J, Zhang Y, Wang M, Sun X, Cong J, Deng Y, Lu H, Yuan T, Van Nostrand JD, Li D, Zhou J, Yang Y. Soil organic matter quantity and quality shape microbial community compositions of subtropical broadleaved forests. Mol Ecol 2015;24:5175-85. [PMID: 26363284 DOI: 10.1111/mec.13384] [Citation(s) in RCA: 64] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2015] [Revised: 09/05/2015] [Accepted: 09/09/2015] [Indexed: 11/27/2022]
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