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For: Toosi R, Akhaee MA, Dehaqani MRA. An automatic spike sorting algorithm based on adaptive spike detection and a mixture of skew-t distributions. Sci Rep 2021;11:13925. [PMID: 34230517 PMCID: PMC8260722 DOI: 10.1038/s41598-021-93088-w] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 06/07/2021] [Indexed: 11/09/2022]  Open
Number Cited by Other Article(s)
1
Liu X, Sanchez SW, Gong Y, Riddle R, Jiang Z, Trevor S, Contag CH, Saha D, Li W. An insect-based bioelectronic sensing system combining flexible dual-sided microelectrode array and insect olfactory circuitry for human lung cancer detection. Biosens Bioelectron 2025;281:117356. [PMID: 40215892 DOI: 10.1016/j.bios.2025.117356] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Revised: 03/05/2025] [Accepted: 03/07/2025] [Indexed: 05/04/2025]
2
Farhang E, Toosi R, Karami B, Koushki R, Kheirkhah N, Shakerian F, Noroozi J, Rezayat E, Vahabie AH, Dehaqani MRA. The impact of spatial frequency on hierarchical category representation in macaque temporal cortex. Commun Biol 2025;8:801. [PMID: 40415067 DOI: 10.1038/s42003-025-08230-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Accepted: 05/14/2025] [Indexed: 05/27/2025]  Open
3
Gong Y, Liu X, Jiang Z, Weber A, Li W. Foldable 3D opto-electro array for optogenetic neuromodulation and physiology recording. MICROSYSTEMS & NANOENGINEERING 2025;11:76. [PMID: 40328757 PMCID: PMC12056113 DOI: 10.1038/s41378-024-00842-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2024] [Revised: 07/12/2024] [Accepted: 09/23/2024] [Indexed: 05/08/2025]
4
Chang W, Hale ME. Neural responses to light stimulation in the octopus arm. J Exp Biol 2025;228:jeb250111. [PMID: 40067259 PMCID: PMC11993263 DOI: 10.1242/jeb.250111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Accepted: 02/19/2025] [Indexed: 04/01/2025]
5
Brockhoff M, Träuble J, Middya S, Fuchsberger T, Fernandez-Villegas A, Stephens A, Robbins M, Dai W, Haider B, Vora S, Läubli NF, Kaminski CF, Malliaras GG, Paulsen O, Kaminski Schierle GS. PseudoSorter: A self-supervised spike sorting approach applied to reveal Tau-induced reductions in neuronal activity. SCIENCE ADVANCES 2025;11:eadr4155. [PMID: 40085717 PMCID: PMC11908484 DOI: 10.1126/sciadv.adr4155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2024] [Accepted: 02/07/2025] [Indexed: 03/16/2025]
6
Saad J, Evans A, Jaoui I, Roux-Sibillon V, Hardy E, Anghel L. Comparison metrics and power trade-offs for BCI motor decoding circuit design. Front Hum Neurosci 2025;19:1547074. [PMID: 40144585 PMCID: PMC11936894 DOI: 10.3389/fnhum.2025.1547074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2024] [Accepted: 02/20/2025] [Indexed: 03/28/2025]  Open
7
Darjani N, Noroozi J, Dehaqani MRA. Unveiling the content of frontal feedback in challenging object recognition. Neuroimage 2025;308:121058. [PMID: 39884415 DOI: 10.1016/j.neuroimage.2025.121058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2024] [Revised: 12/09/2024] [Accepted: 01/27/2025] [Indexed: 02/01/2025]  Open
8
Qin Y, Zhao H, Chang Q, Liu Y, Jing Z, Yu D, Mugo SM, Wang H, Zhang Q. Amylopectin-based Hydrogel Probes for Brain-machine Interfaces. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2025;37:e2416926. [PMID: 39663729 DOI: 10.1002/adma.202416926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2024] [Indexed: 12/13/2024]
9
Nouri S, Tehrani AS, Faridani N, Toosi R, Noroozi J, Dehaqani MRA. Microsaccade selectivity as discriminative feature for object decoding. iScience 2025;28:111584. [PMID: 39811658 PMCID: PMC11731985 DOI: 10.1016/j.isci.2024.111584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2024] [Revised: 10/26/2024] [Accepted: 12/09/2024] [Indexed: 01/16/2025]  Open
10
Lu M, Hui E, Brockhoff M, Träuble J, Fernandez‐Villegas A, Burton OJ, Lamb J, Ward E, Woodhams PJ, Tadbier W, Läubli NF, Hofmann S, Kaminski CF, Lombardo A, Kaminski Schierle GS. Graphene Microelectrode Arrays, 4D Structured Illumination Microscopy, and a Machine Learning Spike Sorting Algorithm Permit the Analysis of Ultrastructural Neuronal Changes During Neuronal Signaling in a Model of Niemann-Pick Disease Type C. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024;11:e2402967. [PMID: 39340823 PMCID: PMC11600250 DOI: 10.1002/advs.202402967] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 08/04/2024] [Indexed: 09/30/2024]
11
Vincent JP, Economo MN. Assessing Cross-Contamination in Spike-Sorted Electrophysiology Data. eNeuro 2024;11:ENEURO.0554-23.2024. [PMID: 39095090 PMCID: PMC11368414 DOI: 10.1523/eneuro.0554-23.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 07/06/2024] [Accepted: 07/20/2024] [Indexed: 08/04/2024]  Open
12
De Venuto G, Beaubois R, Zahedi S, Care M, Cheslet J, Barban F, Di Florio M, Chiappalone M, Levi T. Recapitulating the electrophysiological features of in vivo biological networks by using a real-time hardware Spiking Neural Network. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2024;2024:1-4. [PMID: 40039599 DOI: 10.1109/embc53108.2024.10781591] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/06/2025]
13
Beaubois R, Cheslet J, Duenki T, De Venuto G, Carè M, Khoyratee F, Chiappalone M, Branchereau P, Ikeuchi Y, Levi T. BiœmuS: A new tool for neurological disorders studies through real-time emulation and hybridization using biomimetic Spiking Neural Network. Nat Commun 2024;15:5142. [PMID: 38902236 PMCID: PMC11190274 DOI: 10.1038/s41467-024-48905-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Accepted: 05/15/2024] [Indexed: 06/22/2024]  Open
14
Lohler P, Albert A, Erbsloh A, Nruthyathi, Muller F, Seidl K. A Cell-Type Selective Stimulation and Recording System for Retinal Ganglion Cells. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2024;18:498-510. [PMID: 38096095 DOI: 10.1109/tbcas.2023.3342465] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2024]
15
Huang S, Liu X, Lin S, Glynn C, Felix K, Sahasrabudhe A, Maley C, Xu J, Chen W, Hong E, Crosby AJ, Wang Q, Rao S. Control of polymers' amorphous-crystalline transition enables miniaturization and multifunctional integration for hydrogel bioelectronics. Nat Commun 2024;15:3525. [PMID: 38664445 PMCID: PMC11045824 DOI: 10.1038/s41467-024-47988-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Accepted: 04/17/2024] [Indexed: 04/28/2024]  Open
16
Vincent JP, Economo MN. Assessing cross-contamination in spike-sorted electrophysiology data. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.12.21.572882. [PMID: 38187738 PMCID: PMC10769346 DOI: 10.1101/2023.12.21.572882] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/09/2024]
17
Chang W, Hale ME. Mechanosensory signal transmission in the arms and the nerve ring, an interarm connective, of Octopus bimaculoides. iScience 2023;26:106722. [PMID: 37216097 PMCID: PMC10192654 DOI: 10.1016/j.isci.2023.106722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 02/28/2023] [Accepted: 04/19/2023] [Indexed: 05/24/2023]  Open
18
Liang Q, Shen Z, Sun X, Yu D, Liu K, Mugo SM, Chen W, Wang D, Zhang Q. Electron Conductive and Transparent Hydrogels for Recording Brain Neural Signals and Neuromodulation. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023;35:e2211159. [PMID: 36563409 DOI: 10.1002/adma.202211159] [Citation(s) in RCA: 27] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Indexed: 06/17/2023]
19
A study of autoencoders as a feature extraction technique for spike sorting. PLoS One 2023;18:e0282810. [PMID: 36893210 PMCID: PMC9997908 DOI: 10.1371/journal.pone.0282810] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 02/22/2023] [Indexed: 03/10/2023]  Open
20
Liu D, Li S, Ren L, Liu X, Li X, Wang Z. Different coding characteristics between flight and freezing in dorsal periaqueductal gray of mice during exposure to innate threats. Animal Model Exp Med 2022;5:491-501. [PMID: 36225094 PMCID: PMC9773308 DOI: 10.1002/ame2.12276] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Accepted: 09/09/2022] [Indexed: 12/30/2022]  Open
21
Munier JJ, Pank JT, Severino A, Wang H, Zhang P, Vergnes L, Reue K. Simultaneous monitoring of mouse grip strength, force profile, and cumulative force profile distinguishes muscle physiology following surgical, pharmacologic and diet interventions. Sci Rep 2022;12:16428. [PMID: 36180720 PMCID: PMC9525296 DOI: 10.1038/s41598-022-20665-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Accepted: 09/16/2022] [Indexed: 01/04/2023]  Open
22
Liang Q, Xia X, Sun X, Yu D, Huang X, Han G, Mugo SM, Chen W, Zhang Q. Highly Stretchable Hydrogels as Wearable and Implantable Sensors for Recording Physiological and Brain Neural Signals. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2022;9:e2201059. [PMID: 35362243 PMCID: PMC9165511 DOI: 10.1002/advs.202201059] [Citation(s) in RCA: 58] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2022] [Indexed: 06/01/2023]
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