Systematic assessment of DFT methods for geometry optimization of mononuclear platinum-containing complexes

Excited State Branching Processes in a Ru(II)-Based Donor-Acceptor-Donor System

Excited state properties such as excitation energy, accessibility of the respective excited state either by direct or indirect population transfer, and its lifetime govern the application of these excited states in light-driven reactions, for example, photocatalysis using transition metal complexes. Compared with triplet metal-to-ligand charge transfer (3MLCT) states, charge-separated (3CS) excited states involving organic moieties, such as triplet intra-ligand or ligand-to-ligand charge transfer (3ILCT and 3LLCT) states, tend to possess longer-lived excited states due to the weak spin-orbit coupling with the closed-shell ground state. Thus, the combination of inorganic and organic chromophores enables isolating the triplet states onto the organic chromophore. In this study, we aim to elucidate the excited-state relaxation processes in a Ru(II)-terpyridyl donor-acceptor-donor system (RuCl) in a joint spectroscopic-theoretical approach combining steady-state and time-resolved spectroscopy as well as quantum chemical simulations and dissipative quantum dynamics. The electron transfer (ET) processes involving the low-lying 3MLCT, 3ILCT, and 3LLCT excited states were investigated experimentally and computationally within a semiclassical Marcus picture. Finally, dissipative quantum dynamical simulations-capable of describing incomplete ET processes involving all three states-enabled us to unravel the competitive relaxation channels at short and long timescales among the strongly coupled 3MLCT-3ILCT states and weakly coupled 3MLCT-3LLCT and 3ILCT-3LLCT states.

A Combined Experimental and Computational Exploration of Heteroleptic cis-Pd2L2L'2 Coordination Cages through Geometric Complementarity

Heteroleptic (mixed-ligand) coordination cages are of interest as host systems with more structurally and functionally complex cavities than homoleptic architectures. The design of heteroleptic cages, however, is far from trivial. In this work, we experimentally probed the self-assembly of Pd(II) ions with binary ligand combinations in a combinatorial fashion to search for new cis-Pd2L2L'2 heteroleptic cages. A hierarchy of computational analyses was then applied to these systems with the aim of elucidating key factors for rationalising self-assembly outcomes. Simple and inexpensive geometric analyses were shown to be effective in identifying complementary ligand pairs. Preliminary results demonstrated the viability of relatively rapid semi-empirical calculations for predicting the topology of thermodynamically favoured assemblies with rigid ligands, whilst more flexible systems proved challenging. Stemming from this, key challenges were identified for future work developing effective computational forecasting tools for self-assembled metallo-supramolecular systems.

The Electronic Properties and Adsorption Performance of LDH/Graphene, and LDH/g-C3N4 for the Removal of Pharmaceutical Contaminants: A Molecular Dynamics Simulation

Water shortages and pharmaceutical pollution are two interconnected crises that pose severe threats to global health, environmental sustainability, and economic stability. Pharmaceutical pollution is widespread and has reached potentially toxic levels in over 258 rivers in 104 countries. So far, more interest has been paid towards efficient water treatment processes in recent years. In this study, we explore the efficacy of layered double hydroxide (LDH) nanocomposites with graphene and graphitic carbon nitride (g-C3N4) as promising adsorbents of pharmaceutical contaminants. The LDH nanocomposite has been designed and simulated for the first time, consisting of two layers of sodium hydroxide with a layer of graphene and g-C3N4. We investigated the adsorption performance of LDH, specifically LDH/graphene and LDH/g-C3N4, for the removal of pharmaceutical contaminants including acetaminophen (AC), caffeine (CAF), and sulfamethoxazole (SMZ). Through comprehensive molecular dynamics simulations using the reactive forcefield (ReaxFF) software, we investigated the adsorption mechanisms, kinetics, and adsorption capacity of pharmaceutical contaminants onto these nanocomposite surfaces. Our findings showed that the combination of LDH/graphene had a higher adsorption capacity for the removal of pharmaceutical contaminants than LDH/g-C3N4. At 70 Picoseconds (Ps), 124, 129, and 142 molecules of each of the pharmaceutical contaminants AC, CAF and SMZ, respectively, had been adsorbed by LDH/graphene, with a higher exothermic energy equating to -1111, -1015, and -1150 × 103 kJ/mol, respectively. On the other hand, for LDH/g-C3N4 at 70 Ps, 108, 110, and 120 molecules of AC, CAF and SMZ, respectively, had been adsorbed, with exothermic energy equating to -978, -948, and -1173 × 103 kJ/mol, respectively. Finally, we calculated the electronic properties, including the band gap and density of state of the nanocomposite materials, to check their effect on the adsorption process. In addition, the results showed that the adsorption kinetics followed a pseudo-first-order model, while the adsorption isotherms for AC, CAF and SMZ adhered to the Langmuir model.

Iridium(III) Complexes of Bifunctional 2-(2-Pyridyl)imidazole Ligands: Electrochemiluminescent Emitters in Aqueous Media

A series of electrochemiluminescent (ECL) iridium(III) complexes with the general formula [Ir(C∧N)2(pim)]+ (where C∧N = cyclometalating ligands 2-phenylpyridinato (ppy) or 2-(2,4-difluorophenyl)pyridinato (dFppy), and pim = 2-(2-pyridyl)imidazole) have been synthesized. In each case, the 2-(2-pyridyl)imidazole ancillary ligand has been modified to facilitate bioconjugation and ECL label development. All complexes exhibit blue-shifted optical and electro-generated phosphorescence relative to the archetypal complex [Ir(ppy)2(bpy)]+ (bpy = 2,2'-bipyridine). The emission energies for the complexes were unperturbed by functionalization of the imidazole unit of the pim ligand, whereas the emission energy was significantly blue-shifted when the pyridyl group was modified with an electron-donating oxyethanol unit. Cyclic voltammetric studies provide results consistent with fluorine substituents on the cyclometalating ligands, or an oxyethanol substituent on the neutral pim ligand, widening the highest occupied molecular orbital (HOMO)-lowest unoccupied molecular orbital (LUMO) gap of these complexes. Most of the complexes have high photoluminescence quantum yields (ΦPL) in acetonitrile (up to 0.91), and some have higher ECL efficiencies than [Ru(bpy)3]2+ in both acetonitrile (up to 177%) and ProCell buffer (up to 202%). Theoretical studies provide additional insights into the photophysical and electrochemical properties of this series of compounds.

Adsorption performance of g-C3N4/graphene, and MIL-101(Fe)/graphene for the removal of pharmaceutical contaminants: a molecular dynamics simulation study

The rising presence of drug-related contaminants in water sources is a major environmental and public health concern. Several studies have addressed the hazardous influence of these pollutants on the lives of over 400 million people worldwide. In this study, we used molecular dynamics simulations to evaluate the efficacy of two promising composite materials for the removal of pharmaceutical contaminants by using the adsorption technique. Graphitic carbon nitride/graphene (g-C3N4/graphene) and metal-organic framework (MIL-101(Fe))/graphene have been simulated for the first time for the removal of three of the most common pollutants (acetaminophen (AC), caffeine (CAF), and sulfamethoxazole (SMZ)). The nanocomposite structure has been created and optimized using the geometry optimization task in the DFTB Modules in the Amsterdam Modeling Suite. We summarized the condition of the essential parameters (Temperature, pressure, and density) of the simulation box during the MD-simulation to ensure the accuracy of our MD-simulation results. The adsorption process, van der Waals interactions, and the adsorption capacity have been calculated by using the Reactive Forcefield (ReaxFF) software. We found that the combination of MIL-101(Fe)/graphene had a higher adsorption capacity for the removal of pharmaceutical contaminants than g-C3N4/graphene. At 40 Picosecond (Ps), 80 molecules of each pharmaceutical contaminants (AC, CAF and SMZ) have been adsorbed by MIL-101(Fe)/graphene with higher exothermic energy equated to (-1174, -1630, and - 2347) MJ/mol respectively. While for g-C3N4/graphene at 40 Ps, 70 molecules of each pharmaceutical contaminants have been adsorbed with exothermic energy equated to (-924, -966, and - 1268) MJ/mol respectively. Also, our results showed that the combination of g-C₃N₄/graphene and MIL-101(Fe)/graphene both have remarkable properties that make them effective at resisting surface clogging. Finally, the results showed that the adsorption kinetics followed a pseudo-first order model, while the adsorption isotherms for AC, CAF and SMZ adhered to Freundlich model.

How Much Electron Donation Is There In Transition Metal Complexes? A Computational Study

The "dative" covalent interactions between metals and ligands in coordination compounds, i.e., metal-to-ligand and ligand-to-metal donation, are manifestations of electron delocalization and subject to errors in approximate calculations. This work addresses the extent of dative bonding/donation in a series of closed-shell transition metal complexes. Several Kohn-Sham density functionals, representing different "rungs" of approximations, along with post-Hartree-Fock methods are assessed in comparison to CCSD(T). Two widely used nonhybrid and global hybrid density functionals (B3LYP, PBE0) tend to produce notably too strong donation. Global hybrids with elevated fractions of exact exchange (40 to 50%) and the range-separated exchange functional CAM-B3LYP tend to perform better for the description of the donation. The performance of a double-hybrid functional is found to be quite satisfactory, correcting errors seen in MP2 calculations. A fast approximate coupled-cluster model (DLPNO-CCSD) also gives a reasonable description of the donation, with a tendency to underestimate its extent.

An Iridium Complex as Bidentate Halogen Bond-Based Anion Receptor Featuring an IncreasedOptical Response

We present a luminescent Ir(III) complex featuring a bidentate halogen bond donor site capable of strong anion binding. The tailor-made Ir(III)(L)2 moiety offers a significantly higher emission quantum yield (8.4 %) compared to previous Ir(III)-based chemo-sensors (2.5 %). The successful binding of chloride, bromide and acetate is demonstrated using emission titrations. These experiments reveal association constants of up to 1.6×105 M-1. Furthermore, a new approach to evaluate the association constant by utilizing the shift of the emission was used for the first time. The experimentally observed characteristics are supported by quantum chemical simulations.

Novel Bidentate Amine Ligand and the Interplay between Pd(II) and Pt(II) Coordination and Biological Activity

Pt(II) and Pd(II) coordinating N-donor ligands have been extensively studied as anticancer agents after the success of cisplatin. In this work, a novel bidentate N-donor ligand, the N-[[4-(phenylmethoxy)phenyl]methyl]-2-pyridinemethanamine, was designed to explore the antiparasitic, antiviral and antitumor activity of its Pt(II) and Pd(II) complexes. Chemical and spectroscopic characterization confirm the formation of [MLCl2 ] complexes, where M=Pt(II) and Pd(II). Single crystal X-ray diffraction confirmed a square-planar geometry for the Pd(II) complex. Spectroscopic characterization of the Pt(II) complex suggests a similar structure. 1 H NMR, 195 Pt NMR and HR-ESI-MS(+) analysis of DMSO solution of complexes indicated that both compounds exchange the chloride trans to the pyridine for a solvent molecule with different reaction rates. The ligand and the two complexes were tested for in vitro antitumoral, antileishmanial, and antiviral activity. The Pt(II) complex resulted in a GI50 of 10.5 μM against the NCI/ADR-RES (multidrug-resistant ovarian carcinoma) cell line. The ligand and the Pd(II) complex showed good anti-SARS-CoV-2 activity with around 65 % reduction in viral replication at a concentration of 50 μM.

Resonant Excitation Unlocks Chemical Selectivity of Platinum Lβ Valence-to-Core X-ray Emission Spectra

Valence-to-core X-ray emission spectroscopy (VtC XES) is an emerging technique that uses hard X-rays to probe the valence electronic structure of an absorbing atom. Despite finding varied applications for light elements and first row transition metals, little work has been done on heavier elements such as second and third row transition metals. This lack of application is at least partially due to the relatively low resolution of the data at the high energies required to measure these elements, which obscures the useful chemical information that can be extracted from the lower energy, higher resolution spectra of lighter elements. Herein, we collect data on a set of platinum-containing compounds and demonstrate that the VtC XES resolution can be dramatically enhanced by exciting the platinum atom in resonance with its L3-edge white line absorption. Whereas spectra excited using standard nonresonant absorption well above the Pt L3-edge display broad, unfeatured VtC regions, resonant XES (RXES) spectra have more than twofold improved resolution and are revealed to be rich in chemical information with the ability to distinguish between even closely related species. We further demonstrate that these RXES spectra may be used to selectively probe individual components of a mixture of Pt-containing compounds, establishing this technique as a viable probe for chemically complex samples. Lastly, it is shown that the spectra are interpretable using a molecular orbital framework and may be calculated using density functional theory, thus suggesting resonant excitation as a general strategy for extracting chemically useful information from heavy element VtC spectra.

The three kingdoms-Photoinduced electron transfer cascades controlled by electronic couplings

Excited states are the key species in photocatalysis, while the critical parameters that govern their applications are (i) excitation energy, (ii) accessibility, and (iii) lifetime. However, in molecular transition metal-based photosensitizers, there is a design tension between the creation of long-lived excited (triplet), e.g., metal-to-ligand charge transfer (3MLCT) states and the population of such states. Long-lived triplet states have low spin-orbit coupling (SOC) and hence their population is low. Thus, a long-lived triplet state can be populated but inefficiently. If the SOC is increased, the triplet state population efficiency is improved-coming at the cost of decreasing the lifetime. A promising strategy to isolate the triplet excited state away from the metal after intersystem crossing (ISC) involves the combination of transition metal complex and an organic donor/acceptor group. Here, we elucidate the excited state branching processes in a series of Ru(II)-terpyridyl push-pull triads by quantum chemical simulations. Scalar-relativistic time-dependent density theory simulations reveal that efficient ISC takes place along 1/3MLCT gateway states. Subsequently, competitive electron transfer (ET) pathways involving the organic chromophore, i.e., 10-methylphenothiazinyl and the terpyridyl ligands are available. The kinetics of the underlying ET processes were investigated within the semiclassical Marcus picture and along efficient internal reaction coordinates that connect the respective photoredox intermediates. The key parameter that governs the population transfer away from the metal toward the organic chromophore either by means of ligand-to-ligand (3LLCT; weakly coupled) or intra-ligand charge transfer (3ILCT; strongly coupled) states was determined to be the magnitude of the involved electronic coupling.