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Number Cited by Other Article(s)
1
Bennett DT, Meyer AS. Robust measurement of microbial reduction of graphene oxide nanoparticles using image analysis. Appl Environ Microbiol 2025;91:e0036025. [PMID: 40145756 PMCID: PMC12016504 DOI: 10.1128/aem.00360-25] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2025] [Accepted: 02/28/2025] [Indexed: 03/28/2025]  Open
2
Rastkhah E, Fatemi F, Maghami P. Optimizing the Metal Bioreduction Process in Recombinant Shewanella azerbaijanica Bacteria: A Novel Approach via mtrC Gene Cloning and Nitrate-Reducing Pathway Destruction. Mol Biotechnol 2024;66:3150-3163. [PMID: 37917324 DOI: 10.1007/s12033-023-00920-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2023] [Accepted: 09/22/2023] [Indexed: 11/04/2023]
3
Jia L, Zhou Q, Li Y, Wu W. Application of manganese oxides in wastewater treatment: Biogeochemical Mn cycling driven by bacteria. CHEMOSPHERE 2023:139219. [PMID: 37327824 DOI: 10.1016/j.chemosphere.2023.139219] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Revised: 06/05/2023] [Accepted: 06/13/2023] [Indexed: 06/18/2023]
4
Zhang B, Shi S, Tang R, Qiao C, Yang M, You Z, Shao S, Wu D, Yu H, Zhang J, Cao Y, Li F, Song H. Recent advances in enrichment, isolation, and bio-electrochemical activity evaluation of exoelectrogenic microorganisms. Biotechnol Adv 2023;66:108175. [PMID: 37187358 DOI: 10.1016/j.biotechadv.2023.108175] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Revised: 05/10/2023] [Accepted: 05/10/2023] [Indexed: 05/17/2023]
5
Liou YX, Li SL, Hsieh KY, Li SJ, Hu LJ. Investigating the Extracellular-Electron-Transfer Mechanisms and Kinetics of Shewanella decolorationis NTOU1 Reducing Graphene Oxide via Lactate Metabolism. Bioengineering (Basel) 2023;10:bioengineering10030311. [PMID: 36978702 PMCID: PMC10045794 DOI: 10.3390/bioengineering10030311] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 02/24/2023] [Accepted: 02/27/2023] [Indexed: 03/06/2023]  Open
6
Martín-Rodríguez AJ. Respiration-induced biofilm formation as a driver for bacterial niche colonization. Trends Microbiol 2023;31:120-134. [PMID: 36075785 DOI: 10.1016/j.tim.2022.08.007] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Revised: 08/08/2022] [Accepted: 08/09/2022] [Indexed: 01/27/2023]
7
Römling U. Is biofilm formation intrinsic to the origin of life? Environ Microbiol 2023;25:26-39. [PMID: 36655713 PMCID: PMC10086821 DOI: 10.1111/1462-2920.16179] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Accepted: 08/19/2022] [Indexed: 01/21/2023]
8
Effects of UV stress on Shewanella azerbaijanica bioremediation response. RADIOCHIM ACTA 2022. [DOI: 10.1515/ract-2022-0059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
9
Ding DW, Huang WF, Lei LL, Wu P. Co-fitness analysis identifies a diversity of signal proteins involved in the utilization of specific c-type cytochromes. ANN MICROBIOL 2022. [DOI: 10.1186/s13213-022-01694-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]  Open
10
Boyeldieu A, Poli J, Ali Chaouche A, Fierobe H, Giudici‐Orticoni M, Méjean V, Jourlin‐Castelli C. Multiple detection of both attractants and repellents by the dCache-chemoreceptor SO_1056 of Shewanella oneidensis. FEBS J 2022;289:6752-6766. [PMID: 35668695 PMCID: PMC9796306 DOI: 10.1111/febs.16548] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2022] [Revised: 05/17/2022] [Accepted: 06/06/2022] [Indexed: 01/01/2023]
11
Li Y, Liu K, Mao R, Liu B, Cheng L, Shi X. Unveiling the chemotactic response and mechanism of Shewanella oneidensis MR-1 to nitrobenzene. JOURNAL OF HAZARDOUS MATERIALS 2022;431:128629. [PMID: 35278967 DOI: 10.1016/j.jhazmat.2022.128629] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 02/25/2022] [Accepted: 03/02/2022] [Indexed: 06/14/2023]
12
Then A, Ewald J, Söllner N, Cooper RE, Küsel K, Ibrahim B, Schuster S. Agent-based modelling of iron cycling bacteria provides a framework for testing alternative environmental conditions and modes of action. ROYAL SOCIETY OPEN SCIENCE 2022;9:211553. [PMID: 35620008 PMCID: PMC9115035 DOI: 10.1098/rsos.211553] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/28/2021] [Accepted: 04/27/2022] [Indexed: 05/03/2023]
13
Liu G, Li H, Liu Y, Jin R, Zhou J, Ren Z, Wang Z, Yan C. Extracellular electron transfer influences the transport and retention of ferrihydrite nanoparticles in quartz sand coated with Shewanella oneidensis biofilm. JOURNAL OF HAZARDOUS MATERIALS 2021;417:126023. [PMID: 33992002 DOI: 10.1016/j.jhazmat.2021.126023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Revised: 04/28/2021] [Accepted: 04/29/2021] [Indexed: 06/12/2023]
14
Vibrio cholerae's mysterious Seventh Pandemic island (VSP-II) encodes novel Zur-regulated zinc starvation genes involved in chemotaxis and cell congregation. PLoS Genet 2021;17:e1009624. [PMID: 34153031 PMCID: PMC8248653 DOI: 10.1371/journal.pgen.1009624] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2021] [Revised: 07/01/2021] [Accepted: 05/27/2021] [Indexed: 11/19/2022]  Open
15
Liu L, Liu G, Zhou J, Jin R. Energy Taxis toward Redox-Active Surfaces Decreases the Transport of Electroactive Bacteria in Saturated Porous Media. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021;55:5559-5568. [PMID: 33728915 DOI: 10.1021/acs.est.0c08355] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
16
Martín-Rodríguez AJ, Reyes-Darias JA, Martín-Mora D, González JM, Krell T, Römling U. Reduction of alternative electron acceptors drives biofilm formation in Shewanella algae. NPJ Biofilms Microbiomes 2021;7:9. [PMID: 33504806 PMCID: PMC7840931 DOI: 10.1038/s41522-020-00177-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2019] [Accepted: 12/11/2020] [Indexed: 01/30/2023]  Open
17
Starwalt-Lee R, El-Naggar MY, Bond DR, Gralnick JA. Electrolocation? The evidence for redox-mediated taxis in Shewanella oneidensis. Mol Microbiol 2020;115:1069-1079. [PMID: 33200455 DOI: 10.1111/mmi.14647] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2020] [Revised: 11/11/2020] [Indexed: 11/27/2022]
18
Ng CK, Xu J, Cai Z, Yang L, Thompson IP, Huang WE, Cao B. Elevated intracellular cyclic-di-GMP level in Shewanella oneidensis increases expression of c-type cytochromes. Microb Biotechnol 2020;13:1904-1916. [PMID: 32729223 PMCID: PMC7533324 DOI: 10.1111/1751-7915.13636] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Revised: 06/03/2020] [Accepted: 07/07/2020] [Indexed: 11/29/2022]  Open
19
Liu DF, Li WW. Potential-dependent extracellular electron transfer pathways of exoelectrogens. Curr Opin Chem Biol 2020;59:140-146. [PMID: 32769012 DOI: 10.1016/j.cbpa.2020.06.005] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2020] [Revised: 06/10/2020] [Accepted: 06/13/2020] [Indexed: 10/23/2022]
20
Fukuda TTH, Cassilly CD, Gerdt JP, Henke MT, Helfrich EJN, Mevers E. Research Tales from the Clardy Laboratory: Function-Driven Natural Product Discovery. JOURNAL OF NATURAL PRODUCTS 2020;83:744-755. [PMID: 32105475 DOI: 10.1021/acs.jnatprod.9b01086] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
21
Newsome L, Lopez Adams R, Downie HF, Moore KL, Lloyd JR. NanoSIMS imaging of extracellular electron transport processes during microbial iron(III) reduction. FEMS Microbiol Ecol 2019;94:5033680. [PMID: 29878195 PMCID: PMC6041951 DOI: 10.1093/femsec/fiy104] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2018] [Accepted: 06/05/2018] [Indexed: 01/25/2023]  Open
22
Liu L, Liu G, Zhou J, Wang J, Jin R. Cotransport of biochar and Shewanella oneidensis MR-1 in saturated porous media: Impacts of electrostatic interaction, extracellular electron transfer and microbial taxis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019;658:95-104. [PMID: 30572219 DOI: 10.1016/j.scitotenv.2018.12.031] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2018] [Revised: 11/17/2018] [Accepted: 12/04/2018] [Indexed: 06/09/2023]
23
Tactic Response of Shewanella oneidensis MR-1 toward Insoluble Electron Acceptors. mBio 2019;10:mBio.02490-18. [PMID: 30647155 PMCID: PMC6336422 DOI: 10.1128/mbio.02490-18] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
24
Wilmoth JL, Moran MA, Thompson A. Transient O2 pulses direct Fe crystallinity and Fe(III)-reducer gene expression within a soil microbiome. MICROBIOME 2018;6:189. [PMID: 30352628 PMCID: PMC6199725 DOI: 10.1186/s40168-018-0574-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/15/2018] [Accepted: 10/09/2018] [Indexed: 06/08/2023]
25
Lam BR, Rowe AR, Nealson KH. Variation in electrode redox potential selects for different microorganisms under cathodic current flow from electrodes in marine sediments. Environ Microbiol 2018;20:2270-2287. [PMID: 29786168 DOI: 10.1111/1462-2920.14275] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2018] [Revised: 05/07/2018] [Accepted: 05/08/2018] [Indexed: 12/20/2022]
26
Analysis of functional genomes from metagenomes: Revealing the accelerated electron transfer in microbial fuel cell with rhamnolipid addition. Bioelectrochemistry 2018;119:59-67. [DOI: 10.1016/j.bioelechem.2017.08.010] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Revised: 08/19/2017] [Accepted: 08/24/2017] [Indexed: 11/20/2022]
27
Effect of the anode potential on the physiology and proteome of Shewanella oneidensis MR-1. Bioelectrochemistry 2018;119:172-179. [DOI: 10.1016/j.bioelechem.2017.10.001] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2016] [Revised: 10/02/2017] [Accepted: 10/02/2017] [Indexed: 11/19/2022]
28
Harris HW, Sánchez-Andrea I, McLean JS, Salas EC, Tran W, El-Naggar MY, Nealson KH. Redox Sensing within the Genus Shewanella. Front Microbiol 2018;8:2568. [PMID: 29422884 PMCID: PMC5789149 DOI: 10.3389/fmicb.2017.02568] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2017] [Accepted: 12/11/2017] [Indexed: 11/28/2022]  Open
29
Kim BJ, Chu I, Jusuf S, Kuo T, TerAvest MA, Angenent LT, Wu M. Oxygen Tension and Riboflavin Gradients Cooperatively Regulate the Migration of Shewanella oneidensis MR-1 Revealed by a Hydrogel-Based Microfluidic Device. Front Microbiol 2016;7:1438. [PMID: 27703448 PMCID: PMC5028412 DOI: 10.3389/fmicb.2016.01438] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2016] [Accepted: 08/30/2016] [Indexed: 11/13/2022]  Open
30
White GF, Edwards MJ, Gomez-Perez L, Richardson DJ, Butt JN, Clarke TA. Mechanisms of Bacterial Extracellular Electron Exchange. Adv Microb Physiol 2016;68:87-138. [PMID: 27134022 DOI: 10.1016/bs.ampbs.2016.02.002] [Citation(s) in RCA: 83] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
31
Gross BJ, El-Naggar MY. A combined electrochemical and optical trapping platform for measuring single cell respiration rates at electrode interfaces. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2015;86:064301. [PMID: 26133851 DOI: 10.1063/1.4922853] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
32
Li SL, Nealson KH. Enriching distinctive microbial communities from marine sediments via an electrochemical-sulfide-oxidizing process on carbon electrodes. Front Microbiol 2015;6:111. [PMID: 25741331 PMCID: PMC4330880 DOI: 10.3389/fmicb.2015.00111] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2014] [Accepted: 01/29/2015] [Indexed: 11/13/2022]  Open
33
A dynamic periplasmic electron transfer network enables respiratory flexibility beyond a thermodynamic regulatory regime. ISME JOURNAL 2015;9:1802-11. [PMID: 25635641 DOI: 10.1038/ismej.2014.264] [Citation(s) in RCA: 89] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2014] [Revised: 11/24/2014] [Accepted: 12/05/2014] [Indexed: 11/09/2022]
34
Tikhonova TV, Popov VO. Structural and functional studies of multiheme cytochromes c involved in extracellular electron transport in bacterial dissimilatory metal reduction. BIOCHEMISTRY (MOSCOW) 2015;79:1584-601. [DOI: 10.1134/s0006297914130094] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
35
Römling U, Kjelleberg S, Normark S, Nyman L, Uhlin BE, Åkerlund B. Microbial biofilm formation: a need to act. J Intern Med 2014;276:98-110. [PMID: 24796496 DOI: 10.1111/joim.12242] [Citation(s) in RCA: 110] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
36
Molecular mechanisms of heme based sensors from sediment organisms capable of extracellular electron transfer. J Inorg Biochem 2014;133:104-9. [DOI: 10.1016/j.jinorgbio.2013.10.024] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2013] [Revised: 10/15/2013] [Accepted: 10/23/2013] [Indexed: 11/18/2022]
37
Electron transport at the microbe-mineral interface: a synthesis of current research challenges. Biochem Soc Trans 2013;40:1163-6. [PMID: 23176448 DOI: 10.1042/bst20120242] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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