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Egan PA, Stevenson PC, Stout JC. Pollinator selection against toxic nectar as a key facilitator of a plant invasion. Philos Trans R Soc Lond B Biol Sci 2022; 377:20210168. [PMID: 35491597 DOI: 10.1098/rstb.2021.0168] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Plant compounds associated with herbivore defence occur widely in floral nectar and can impact pollinator health. We showed previously that Rhododendron ponticum nectar contains grayanotoxin I (GTX I) at concentrations that are lethal or sublethal to honeybees and a solitary bee in the plant's non-native range in Ireland. Here we further examined this conflict and tested the hypotheses that nectar GTX I is subject to negative pollinator-mediated selection in the non-native range, but that phenotypic linkage between GTX I levels in nectar and leaves acts as a constraint on independent evolution. We found that nectar GTX I experienced negative directional selection in the non-native range, in contrast to the native Iberian range, and that the magnitude and frequency of pollinator limitation indicated that selection was pollinator-mediated. Surprisingly, nectar GTX I levels were decoupled from those of leaves in the non-native range, which may have assisted post-invasion evolution of nectar without compromising the anti-herbivore function of GTX I (here demonstrated in bioassays with an ecologically relevant herbivore). Our study emphasizes the centrality of pollinator health as a concept linked to the invasion process, and how post-invasion evolution can be targeted toward minimizing lethal or sub-lethal effects on pollinators. This article is part of the theme issue 'Natural processes influencing pollinator health: from chemistry to landscapes'.
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Affiliation(s)
- Paul A Egan
- Department of Plant Protection Biology, Swedish University of Agricultural Sciences, PO Box 102, Alnarp 23053, Sweden
| | - Philip C Stevenson
- Royal Botanic Gardens, Kew, Kew Green, Richmond, Surrey TW9 3AE, UK.,Natural Resources Institute, University of Greenwich, Chatham, Kent ME4 4TB, UK
| | - Jane C Stout
- Department of Botany, School of Natural Sciences, Trinity College Dublin, Dublin 2, Ireland
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2
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Holden CA, Bailey JP, Taylor JE, Martin F, Beckett P, McAinsh M. Know your enemy: Application of ATR-FTIR spectroscopy to invasive species control. PLoS One 2022; 17:e0261742. [PMID: 34995300 PMCID: PMC8740966 DOI: 10.1371/journal.pone.0261742] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Accepted: 12/08/2021] [Indexed: 11/29/2022] Open
Abstract
Extreme weather and globalisation leave our climate vulnerable to invasion by alien species, which have negative impacts on the economy, biodiversity, and ecosystem services. Rapid and accurate identification is key to the control of invasive alien species. However, visually similar species hinder conservation efforts, for example hybrids within the Japanese Knotweed complex.We applied the novel method of ATR-FTIR spectroscopy combined with chemometrics (mathematics applied to chemical data) to historic herbarium samples, taking 1580 spectra in total. Samples included five species from within the interbreeding Japanese Knotweed complex (including three varieties of Japanese Knotweed), six hybrids and five species from the wider Polygonaceae family. Spectral data from herbarium specimens were analysed with several chemometric techniques: support vector machines (SVM) for differentiation between plant types, supported by ploidy levels; principal component analysis loadings and spectral biomarkers to explore differences between the highly invasive Reynoutria japonica var. japonica and its non-invasive counterpart Reynoutria japonica var. compacta; hierarchical cluster analysis (HCA) to investigate the relationship between plants within the Polygonaceae family, of the Fallopia, Reynoutria, Rumex and Fagopyrum genera.ATR-FTIR spectroscopy coupled with SVM successfully differentiated between plant type, leaf surface and geographical location, even in herbarium samples of varying age. Differences between Reynoutria japonica var. japonica and Reynoutria japonica var. compacta included the presence of two polysaccharides, glucomannan and xyloglucan, at higher concentrations in Reynoutria japonica var. japonica than Reynoutria japonica var. compacta. HCA analysis indicated that potential genetic linkages are sometimes masked by environmental factors; an effect that can either be reduced or encouraged by altering the input parameters. Entering the absorbance values for key wavenumbers, previously highlighted by principal component analysis loadings, favours linkages in the resultant HCA dendrogram corresponding to expected genetic relationships, whilst environmental associations are encouraged using the spectral fingerprint region.The ability to distinguish between closely related interbreeding species and hybrids, based on their spectral signature, raises the possibility of using this approach for determining the origin of Japanese knotweed infestations in legal cases where the clonal nature of plants currently makes this difficult and for the targeted control of species and hybrids. These techniques also provide a new method for supporting biogeographical studies.
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Affiliation(s)
- Claire Anne Holden
- Lancaster Environment Centre, Lancaster University, Lancaster, United Kingdom
| | - John Paul Bailey
- Department of Genetics and Genome Biology, Leicester University, Leicester, United Kingdom
| | | | | | | | - Martin McAinsh
- Lancaster Environment Centre, Lancaster University, Lancaster, United Kingdom
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Malo AF, Taylor A, Díaz M. Native seed dispersal by rodents is negatively influenced by an invasive shrub. ANIMAL BIODIVERSITY AND CONSERVATION 2021. [DOI: 10.32800/abc.2022.45.0053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Refuge–mediated apparent competition is the mechanism by which invasive plants increase pressure on native plants by providing refuge for generalist consumers. In the UK, the invasive Rhododendron ponticum does not provide food for generalist seed consumers like rodents, but evergreen canopy provides refuge from rodent predators, and predation and pilferage risk are key factors affecting rodent foraging and caching behaviour. Here we used a seed removal/ seed fate experiment to understand how invasion by an evergreen shrub can alter seed dispersal, seed fate and early recruitment of native trees. We used seeds of four species, small and wind–dispersed (sycamore maple Acer pseudoplatanus and European ash Fraxinus excelsior) and large and animal–dispersed (pedunculate oak Quercus robur and common hazel Corylus avellana), and monitored seed predation and caching in open woodland, edge habitats, and under Rhododendron. In the open woodland, wind–dispersed seeds had a higher probability of being eaten in situ than cached seeds, while the opposite occurred with animal–dispersed seeds. The latter were removed from the open woodland and edge habitats and cached under Rhododendron. This pattern was expected if predation risk was the main factor influencing the decision to eat or to cach a seed. Enhanced dispersal towards Rhododendron cover did not increase the prospects for seed survival, as density of hazel and oak saplings under its cover was close to zero as compared to open woodland, possibly due to increased cache pilferage or low seedling survival under dense shade, or both. Enhanced seed predation of ash and sycamore seeds close to Rhododendron cover also decreased recruitment of these trees. Rhododendron patches biased rodent foraging behaviour towards the negative (net predation) side of the conditional rodent / tree interaction. This effect will potentially impact native woodland regeneration and further facilitate Rhododendron spread due to refuge–mediated apparent competition.
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Affiliation(s)
| | | | - M. Díaz
- Museo Nacional de Ciencias Naturales (BGC–MNCN–CSIC), Madrid, Spain
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Manzoor SA, Griffiths G, Obiakara MC, Esparza-Estrada CE, Lukac M. Evidence of ecological niche shift in Rhododendron ponticum (L.) in Britain: Hybridization as a possible cause of rapid niche expansion. Ecol Evol 2020; 10:2040-2050. [PMID: 32128136 PMCID: PMC7042765 DOI: 10.1002/ece3.6036] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Revised: 01/02/2020] [Accepted: 01/06/2020] [Indexed: 01/21/2023] Open
Abstract
Biological invasions threaten global biodiversity and natural resources. Anticipating future invasions is central to strategies for combating the spread of invasive species. Ecological niche models are thus increasingly used to predict potential distribution of invasive species. In this study, we compare ecological niches of Rhododendron ponticum in its native (Iberian Peninsula) and invasive (Britain) ranges. Here, we test the conservation of ecological niche between invasive and native populations of R. ponticum using principal component analysis, niche dynamics analysis, and MaxEnt-based reciprocal niche modeling. We show that niche overlap between native and invasive populations is very low, leading us to the conclusion that the two niches are not equivalent and are dissimilar. We conclude that R. ponticum occupies novel environmental conditions in Britain. However, the evidence of niche shift presented in this study should be treated with caution because of nonanalogue climatic conditions between native and invasive ranges and a small population size in the native range. We then frame our results in the context of contradicting genetic evidence on possible hybridization of this invasive species in Britain. We argue that the existing contradictory studies on whether hybridization caused niche shift in R. ponticum are not sufficient to prove or disprove this hypothesis. However, we present a series of theoretical arguments which indicate that hybridization is a likely cause of the observed niche expansion of R. ponticum in Britain.
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Affiliation(s)
- Syed Amir Manzoor
- School of Agriculture, Policy and Development University of Reading Reading UK
- Department of Forestry & Range Management FAS&T Bahauddin Zakariya University Multan Multan Pakistan
| | - Geoffrey Griffiths
- Department of Geography and Environmental Science University of Reading Reading UK
| | | | | | - Martin Lukac
- School of Agriculture, Policy and Development University of Reading Reading UK
- Faculty of Forestry and Wood Sciences Czech University of Life Sciences Prague Prague Czech Republic
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5
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Nesrin K, Yusuf C, Ahmet K, Ali SB, Muhammad NA, Suna S, Fatih Ş. Biogenic silver nanoparticles synthesized from Rhododendron ponticum and their antibacterial, antibiofilm and cytotoxic activities. J Pharm Biomed Anal 2019; 179:112993. [PMID: 31780283 DOI: 10.1016/j.jpba.2019.112993] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2019] [Revised: 11/12/2019] [Accepted: 11/13/2019] [Indexed: 01/30/2023]
Abstract
Nanotechnology is being used effectively in many areas contemporarily. Silver nanoparticles (AgNPs) are one of the most crucial and remarkable nanomaterials involved in medical applications. These nanoparticles (NPs) have an important place in nanomedicine, nanotechnology, and in particularly, nanoscience. AgNPs are one of the most widely used materials in antibacterial and antiseptic practices. The synthesis of biogenic AgNPs has been applied as an alternative to physical and chemical synthesis. For this purpose, water extracts of Rhododendron ponticum were used for biosynthesis of AgNPs. Also, AgNPs were characterized by UV-vis spectrophotometer, scanning transmission electron microscope (STEM) and X-ray diffractometer (XRD). The antimicrobial activity of AgNPs synthesized with Rhododendron ponticum was analyzed by the Minimum Inhibition Concentration (MIC) test. Also, the biofilm inhibition test was made, and AgNPs showed a strong effect for biofilm inhibition. In addition, the prepared nanoparticles were tried for cytotoxicity activity with the help of MTT assay in MCF-7 and 4T1 cancer cell lines.
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Affiliation(s)
- Korkmaz Nesrin
- Faculty of Science, Biotechnology Department, Bartın University, 74100 Bartın, Turkey.
| | - Ceylan Yusuf
- Faculty of Science, Department of Molecular Biology and Genetics, Bartın University, 74100 Bartın, Turkey
| | - Karadağ Ahmet
- Department of Chemistry, Faculty of Arts and Sciences, Yozgat Bozok University, 66200, Yozgat, Turkey
| | - Savaş Bülbül Ali
- Department of Biology, Faculty of Science and Arts, Kahramanmaraş Sütçü İmam University, 46100, Kahramanmaraş, Turkey
| | - Nauman Aftab Muhammad
- Institute of Industrial Biotechnology Government College University, Lahore, Pakistan
| | - Saygılı Suna
- Faculty of Medicine, Department of Histology-Embryology, Kütahya University of Health Sciences, 43100, Kütahya, Turkey; Sen Research Group, Biochemistry Department, Faculty of Arts and Science, Dumlupınar University, Evliya Çelebi Campus, 43100 Kütahya, Turkey
| | - Şen Fatih
- Sen Research Group, Biochemistry Department, Faculty of Arts and Science, Dumlupınar University, Evliya Çelebi Campus, 43100 Kütahya, Turkey.
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Abstract
Introgression is emerging as an important source of novel genetic variation, alongside standing variation and mutation. It is adaptive when such introgressed alleles are maintained by natural selection. Recently, there has been an explosion in the number of studies on adaptive introgression. In this review, we take a plant perspective centred on four lines of evidence: (i) introgression, (ii) selection, (iii) phenotype and (iv) fitness. While advances in genomics have contributed to our understanding of introgression and porous species boundaries (task 1), and the detection of signatures of selection in introgression (task 2), the investigation of adaptive introgression critically requires links to phenotypic variation and fitness (tasks 3 and 4). We also discuss the conservation implications of adaptive introgression in the face of climate change. Adaptive introgression is particularly important in rapidly changing environments, when standing genetic variation and mutation alone may only offer limited potential for adaptation. We conclude that clarifying the magnitude and fitness effects of introgression with improved statistical techniques, coupled with phenotypic evidence, has great potential for conservation and management efforts.
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Affiliation(s)
| | - Christian Lexer
- Department of Botany and Biodiversity Research, University of Vienna, Vienna, Austria
| | - Quentin C B Cronk
- Department of Botany, University of British Columbia, Vancouver, Canada
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WITHDRAWN: Population structure and Genetic Diversity Analysis in Rhododendron arboreum by using AFLP marker. GENE REPORTS 2018. [DOI: 10.1016/j.genrep.2018.11.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Maclean JE, Mitchell RJ, Burslem DFRP, Genney D, Hall J, Pakeman RJ. Seed limitation, not soil legacy effects, prevents native understorey from establishing in oak woodlands in Scotland after removal ofRhododendron ponticum. Restor Ecol 2018. [DOI: 10.1111/rec.12664] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Janet E. Maclean
- Ecological Sciences; The James Hutton Institute; Aberdeen AB15 8QH U.K
- Institute of Biological and Environmental Sciences; University of Aberdeen, St. Machar Drive; Aberdeen AB24 3UU U.K
| | - Ruth J. Mitchell
- Ecological Sciences; The James Hutton Institute; Aberdeen AB15 8QH U.K
| | - David F. R. P. Burslem
- Institute of Biological and Environmental Sciences; University of Aberdeen, St. Machar Drive; Aberdeen AB24 3UU U.K
| | - David Genney
- Scottish Natural Heritage; Inverness IV3 8NW U.K
| | | | - Robin J. Pakeman
- Ecological Sciences; The James Hutton Institute; Aberdeen AB15 8QH U.K
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Klonner G, Dullinger I, Wessely J, Bossdorf O, Carboni M, Dawson W, Essl F, Gattringer A, Haeuser E, van Kleunen M, Kreft H, Moser D, Pergl J, Pyšek P, Thuiller W, Weigelt P, Winter M, Dullinger S. Will climate change increase hybridization risk between potential plant invaders and their congeners in Europe? DIVERS DISTRIB 2017; 23:934-943. [PMID: 28781572 PMCID: PMC5518762 DOI: 10.1111/ddi.12578] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
AIM Interspecific hybridization can promote invasiveness of alien species. In many regions of the world, public and domestic gardens contain a huge pool of non-native plants. Climate change may relax constraints on their naturalization and hence facilitate hybridization with related species in the resident flora. Here, we evaluate this possible increase in hybridization risk by predicting changes in the overlap of climatically suitable ranges between a set of garden plants and their congeners in the resident flora. LOCATION Europe. METHODS From the pool of alien garden plants, we selected those which (1) are not naturalized in Europe, but established outside their native range elsewhere in the world; (2) belong to a genus where interspecific hybridization has been previously reported; and (3) have congeners in the native and naturalized flora of Europe. For the resulting set of 34 alien ornamentals as well as for 173 of their European congeners, we fitted species distribution models and projected suitable ranges under the current climate and three future climate scenarios. Changes in range overlap between garden plants and congeners were then assessed by means of the true skill statistic. RESULTS Projections suggest that under a warming climate, suitable ranges of garden plants will increase, on average, while those of their congeners will remain constant or shrink, at least under the more severe climate scenarios. The mean overlap in ranges among congeners of the two groups will decrease. Variation among genera is pronounced; however, and for some congeners, range overlap is predicted to increase significantly. MAIN CONCLUSIONS Averaged across all modelled species, our results do not indicate that hybrids between potential future invaders and resident species will emerge more frequently in Europe when climate warms. These average trends do not preclude, however, that hybridization risk may considerably increase in particular genera.
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Affiliation(s)
- Günther Klonner
- Department of Botany and Biodiversity ResearchFaculty of Life SciencesUniversity of ViennaViennaAustria
| | - Iwona Dullinger
- Department of Botany and Biodiversity ResearchFaculty of Life SciencesUniversity of ViennaViennaAustria
- Institute of Social EcologyFaculty for Interdisciplinary StudiesAlps Adria UniversityViennaAustria
| | - Johannes Wessely
- Department of Botany and Biodiversity ResearchFaculty of Life SciencesUniversity of ViennaViennaAustria
| | - Oliver Bossdorf
- Institute of Evolution & EcologyUniversity of TübingenTübingenGermany
| | - Marta Carboni
- Laboratoire d'Écologie Alpine (LECA), CNRSUniversity of Grenoble AlpesGrenobleFrance
| | - Wayne Dawson
- Department of Biology, EcologyUniversity of KonstanzKonstanzGermany
- Department of BiosciencesDurham UniversityDurhamUK
| | - Franz Essl
- Department of Botany and Biodiversity ResearchFaculty of Life SciencesUniversity of ViennaViennaAustria
| | - Andreas Gattringer
- Department of Botany and Biodiversity ResearchFaculty of Life SciencesUniversity of ViennaViennaAustria
| | - Emily Haeuser
- Department of Biology, EcologyUniversity of KonstanzKonstanzGermany
| | - Mark van Kleunen
- Department of Biology, EcologyUniversity of KonstanzKonstanzGermany
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and ConservationTaizhou UniversityTaizhouChina
| | - Holger Kreft
- Biodiversity, Macroecology & BiogeographyUniversity of GoettingenGöttingenGermany
| | - Dietmar Moser
- Department of Botany and Biodiversity ResearchFaculty of Life SciencesUniversity of ViennaViennaAustria
| | - Jan Pergl
- Department of Invasion EcologyInstitute of BotanyThe Czech Academy of SciencesPrůhoniceCzech Republic
| | - Petr Pyšek
- Department of Invasion EcologyInstitute of BotanyThe Czech Academy of SciencesPrůhoniceCzech Republic
- Department of EcologyFaculty of ScienceCharles UniversityPragueCzech Republic
| | - Wilfried Thuiller
- Laboratoire d'Écologie Alpine (LECA), CNRSUniversity of Grenoble AlpesGrenobleFrance
| | - Patrick Weigelt
- Biodiversity, Macroecology & BiogeographyUniversity of GoettingenGöttingenGermany
| | - Marten Winter
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐LeipzigLeipzigGermany
| | - Stefan Dullinger
- Department of Botany and Biodiversity ResearchFaculty of Life SciencesUniversity of ViennaViennaAustria
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Mandel JR, Ramsey AJ, Iorizzo M, Simon PW. Patterns of Gene Flow between Crop and Wild Carrot, Daucus carota (Apiaceae) in the United States. PLoS One 2016; 11:e0161971. [PMID: 27603516 PMCID: PMC5014312 DOI: 10.1371/journal.pone.0161971] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2016] [Accepted: 08/15/2016] [Indexed: 11/18/2022] Open
Abstract
Studies of gene flow between crops and their wild relatives have implications for both management practices for cultivation and understanding the risk of transgene escape. These types of studies may also yield insight into population dynamics and the evolutionary consequences of gene flow for wild relatives of crop species. Moreover, the comparison of genetic markers with different modes of inheritance, or transmission, such as those of the nuclear and chloroplast genomes, can inform the relative risk of transgene escape via pollen versus seed. Here we investigate patterns of gene flow between crop and wild carrot, Daucus carota (Apiaceae) in two regions of the United States. We employed 15 nuclear simple sequence repeat (SSR) markers and one polymorphic chloroplast marker. Further, we utilized both conventional population genetic metrics along with Shannon diversity indices as the latter have been proposed to be more sensitive to allele frequency changes and differentiation. We found that populations in both regions that were proximal to crop fields showed lower levels of differentiation to the crops than populations that were located farther away. We also found that Shannon measures were more sensitive to differences in both genetic diversity and differentiation in our study. Finally, we found indirect evidence of paternal transmission of chloroplast DNA and accompanying lower than expected levels of chloroplast genetic structure amongst populations as might be expected if chloroplast DNA genes flow through both seed and pollen. Our findings of substantial gene flow for both nuclear and chloroplast markers demonstrate the efficiency of both pollen and seed to transfer genetic information amongst populations of carrot.
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Affiliation(s)
- Jennifer R. Mandel
- Department of Biological Sciences, The University of Memphis, Memphis, Tennessee, United States of America
- W. Harry Feinstone Center for Genomic Research, The University of Memphis, Memphis, Tennessee, United States of America
- * E-mail:
| | - Adam J. Ramsey
- Department of Biological Sciences, The University of Memphis, Memphis, Tennessee, United States of America
| | - Massimo Iorizzo
- Plants for Human Health Institute, Department of Horticultural Science, North Carolina State University, Kannapolis, North Carolina, United States of America
| | - Philipp W. Simon
- USDA-Agricultural Research Service, Vegetable Crops Unit, University of Wisconsin-Madison, Wisconsin, United States of America
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12
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Vallejo-Marín M, Hiscock SJ. Hybridization and hybrid speciation under global change. THE NEW PHYTOLOGIST 2016; 211:1170-87. [PMID: 27214560 DOI: 10.1111/nph.14004] [Citation(s) in RCA: 74] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2015] [Accepted: 04/07/2016] [Indexed: 05/24/2023]
Abstract
Contents 1170 I. 1170 II. 1172 III. 1175 IV. 1180 V. 1183 1184 References 1184 SUMMARY: An unintended consequence of global change is an increase in opportunities for hybridization among previously isolated lineages. Here we illustrate how global change can facilitate the breakdown of reproductive barriers and the formation of hybrids, drawing on the flora of the British Isles for insight. Although global change may ameliorate some of the barriers preventing hybrid establishment, for example by providing new ecological niches for hybrids, it will have limited effects on environment-independent post-zygotic barriers. For example, genic incompatibilities and differences in chromosome numbers and structure within hybrid genomes are unlikely to be affected by global change. We thus speculate that global change will have a larger effect on eroding pre-zygotic barriers (eco-geographical isolation and phenology) than post-zygotic barriers, shifting the relative importance of these two classes of reproductive barriers from what is usually seen in naturally produced hybrids where pre-zygotic barriers are the largest contributors to reproductive isolation. Although the long-term fate of neo-hybrids is still to be determined, the massive impact of global change on the dynamics and distribution of biodiversity generates an unprecedented opportunity to study large numbers of unpredicted, and often replicated, hybridization 'experiments', allowing us to peer into the birth and death of evolutionary lineages.
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Affiliation(s)
- Mario Vallejo-Marín
- Biological and Environmental Sciences, School of Natural Sciences, University of Stirling, Stirling, FK9 4LA, UK
| | - Simon J Hiscock
- University of Oxford Botanic Garden, Rose Lane, Oxford, OX1 4AZ, UK
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Mayonde SG, Cron GV, Gaskin JF, Byrne MJ. Tamarix (Tamaricaceae) hybrids: the dominant invasive genotype in southern Africa. Biol Invasions 2016. [DOI: 10.1007/s10530-016-1249-4] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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14
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Kowal J, Pressel S, Duckett JG, Bidartondo MI. Liverworts to the rescue: an investigation of their efficacy as mycorrhizal inoculum for vascular plants. Funct Ecol 2015. [DOI: 10.1111/1365-2435.12580] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Jill Kowal
- Imperial College London South Kensington Campus London SW7 2AZ UK
- Royal Botanic Gardens, Kew Jodrell Laboratory Richmond Kew TW9 3AB UK
| | | | | | - Martin I. Bidartondo
- Imperial College London South Kensington Campus London SW7 2AZ UK
- Royal Botanic Gardens, Kew Jodrell Laboratory Richmond Kew TW9 3AB UK
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15
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Thomas CD. Rapid acceleration of plant speciation during the Anthropocene. Trends Ecol Evol 2015; 30:448-55. [DOI: 10.1016/j.tree.2015.05.009] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2015] [Revised: 05/27/2015] [Accepted: 05/28/2015] [Indexed: 11/26/2022]
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Cristescu ME. Genetic reconstructions of invasion history. Mol Ecol 2015; 24:2212-25. [DOI: 10.1111/mec.13117] [Citation(s) in RCA: 166] [Impact Index Per Article: 16.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2014] [Revised: 02/11/2015] [Accepted: 02/12/2015] [Indexed: 12/14/2022]
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Stout JC, Duffy KJ, Egan PA, Harbourne M, Hodkinson TR. Genetic diversity and floral width variation in introduced and native populations of a long-lived woody perennial. AOB PLANTS 2014; 7:plu087. [PMID: 25527475 PMCID: PMC4323518 DOI: 10.1093/aobpla/plu087] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/25/2013] [Accepted: 11/28/2014] [Indexed: 06/04/2023]
Abstract
Populations of introduced species in their new environments are expected to differ from native populations, due to processes such as genetic drift, founder effects and local adaptation, which can often result in rapid phenotypic change. Such processes can also lead to changes in the genetic structure of these populations. This study investigated the populations of Rhododendron ponticum in its introduced range in Ireland, where it is severely invasive, to determine both genetic and flower width diversity and differentiation. We compared six introduced Irish populations with two populations from R. ponticum's native range in Spain, using amplified fragment length polymorphism and simple sequence repeat genetic markers. We measured flower width, a trait that may affect pollinator visitation, from four Irish and four Spanish populations by measuring both the width at the corolla tip and tube base (nectar holder width). With both genetic markers, populations were differentiated between Ireland and Spain and from each other in both countries. However, populations displayed low genetic diversity (mean Nei's genetic diversity = 0.22), with the largest proportion (76-93 %) of genetic variation contained within, rather than between, populations. Although corolla width was highly variable between individuals within populations, tube width was significantly wider (>0.5 mm) in introduced, compared with native, populations. Our results show that the same species can have genetically distinct populations in both invasive and native regions, and that differences in floral width may occur, possibly in response to ecological sorting processes or local adaptation to pollinator communities.
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Affiliation(s)
- Jane C Stout
- School of Natural Sciences and Trinity Centre for Biodiversity Research, Trinity College Dublin, Dublin 2, Ireland
| | - Karl J Duffy
- School of Natural Sciences and Trinity Centre for Biodiversity Research, Trinity College Dublin, Dublin 2, Ireland School of Life Sciences, University of KwaZulu-Natal, Private Bag X01, Scottsville, Pietermaritzburg 3209, South Africa
| | - Paul A Egan
- School of Natural Sciences and Trinity Centre for Biodiversity Research, Trinity College Dublin, Dublin 2, Ireland
| | - Maeve Harbourne
- School of Natural Sciences and Trinity Centre for Biodiversity Research, Trinity College Dublin, Dublin 2, Ireland
| | - Trevor R Hodkinson
- School of Natural Sciences and Trinity Centre for Biodiversity Research, Trinity College Dublin, Dublin 2, Ireland
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Puzey J, Vallejo-Marín M. Genomics of invasion: diversity and selection in introduced populations of monkeyflowers (Mimulus guttatus). Mol Ecol 2014; 23:4472-85. [DOI: 10.1111/mec.12875] [Citation(s) in RCA: 50] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2014] [Revised: 07/02/2014] [Accepted: 07/22/2014] [Indexed: 12/30/2022]
Affiliation(s)
- Joshua Puzey
- Department of Biology; Duke University; Durham NC 27705 USA
- Department of Biology; College of William and Mary; Williamsburg VA 23185 USA
| | - Mario Vallejo-Marín
- Biological and Environmental Sciences; University of Stirling; Stirling FK9 4LA UK
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Yan C, Hu Q, Sun G. Nuclear and chloroplast DNA phylogeny reveals complex evolutionary history of Elymus pendulinus. Genome 2014; 57:97-109. [DOI: 10.1139/gen-2014-0002] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Evidence accumulated over the last decade has shown that allopolyploid genomes may undergo complex reticulate evolution. In this study, 13 accessions of tetraploid Elymus pendulinus were analyzed using two low-copy nuclear genes (RPB2 and PepC) and two regions of chloroplast genome (Rps16 and trnD-trnT). Previous studies suggested that Pseudoroegneria (St) and an unknown diploid (Y) were genome donors to E. pendulinus, and that Pseudoroegneria was the maternal donor. Our results revealed an extreme reticulate pattern, with at least four distinct gene lineages coexisting within this species that might be acquired through a possible combination of allotetraploidization and introgression from both within and outside the tribe Hordeeae. Chloroplast DNA data identified two potential maternal genome donors (Pseudoroegneria and an unknown species outside Hordeeae) to E. pendulinus. Nuclear gene data indicated that both Pseudoroegneria and an unknown Y diploid have contributed to the nuclear genome of E. pendulinus, in agreement with cytogenetic data. However, unexpected contributions from Hordeum and unknown aliens from within or outside Hordeeae to E. pendulinus without genome duplication were observed. Elymus pendulinus provides a remarkable instance of the previously unsuspected chimerical nature of some plant genomes and the resulting phylogenetic complexity produced by multiple historical reticulation events.
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Affiliation(s)
- Chi Yan
- Biology Department, Saint Mary’s University, 923 Robie Street, Halifax, NS B3H 3C3, Canada
| | - Qianni Hu
- Biology Department, Saint Mary’s University, 923 Robie Street, Halifax, NS B3H 3C3, Canada
| | - Genlou Sun
- Biology Department, Saint Mary’s University, 923 Robie Street, Halifax, NS B3H 3C3, Canada
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20
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Parepa M, Fischer M, Krebs C, Bossdorf O. Hybridization increases invasive knotweed success. Evol Appl 2014; 7:413-20. [PMID: 24665343 PMCID: PMC3962301 DOI: 10.1111/eva.12139] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2013] [Accepted: 10/21/2013] [Indexed: 11/30/2022] Open
Abstract
Hybridization is one of the fundamental mechanisms by which rapid evolution can occur in exotic species. If hybrids show increased vigour, this could significantly contribute to invasion success. Here, we compared the success of the two invasive knotweeds, Fallopia japonica and F. sachalinensis, and their hybrid, F. × bohemica, in competing against experimental communities of native plants. Using plant material from multiple clones of each taxon collected across a latitudinal gradient in Central Europe, we found that knotweed hybrids performed significantly better in competition with a native community and that they more strongly reduced the growth of the native plants. One of the parental species, F. sachalinensis, regenerated significantly less well from rhizomes, and this difference disappeared if activated carbon was added to the substrate, which suggests allelopathic inhibition of F. sachalinensis regeneration by native plants. We found substantial within-taxon variation in competitive success in all knotweed taxa, but variation was generally greatest in the hybrid. Interestingly, there was also significant variation within the genetically uniform F. japonica, possibly reflecting epigenetic differences. Our study shows that invasive knotweed hybrids are indeed more competitive than their parents and that hybridization increased the invasiveness of the exotic knotweed complex.
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Affiliation(s)
- Madalin Parepa
- Institute of Plant Sciences, University of Bern Bern, Switzerland ; Institute of Evolution and Ecology, University of Tübingen Tübingen, Germany
| | - Markus Fischer
- Institute of Plant Sciences, University of Bern Bern, Switzerland
| | | | - Oliver Bossdorf
- Institute of Plant Sciences, University of Bern Bern, Switzerland ; Institute of Evolution and Ecology, University of Tübingen Tübingen, Germany
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21
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Pyšek P, Hulme PE, Meyerson LA, Smith GF, Boatwright JS, Crouch NR, Figueiredo E, Foxcroft LC, Jarošík V, Richardson DM, Suda J, Wilson JRU. Hitting the right target: taxonomic challenges for, and of, plant invasions. AOB PLANTS 2013; 5:plt042. [PMCID: PMC4455668 DOI: 10.1093/aobpla/plt042] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2013] [Accepted: 09/10/2013] [Indexed: 05/25/2023]
Abstract
Taxonomic resources are essential for the effective management of invasive plants because biosecurity strategies, legislation dealing with invasive species, quarantine, weed surveillance and monitoring all depend on accurate and rapid identification of non-native taxa, and incorrect identifications can impede ecological studies. On the other hand, biological invasions have provided important tests of basic theories about species concepts. Modern taxonomy therefore needs to integrate both classical and new concepts and approaches to improve the accuracy of species identification and further refine taxonomic classification at the level of populations and genotypes in the field and laboratory. This paper explores how a lack of taxonomic expertise, and by implication a dearth of taxonomic products such as identification tools, has hindered progress in understanding and managing biological invasions. It also explores how the taxonomic endeavour could benefit from studies of invasive species. We review the literature on the current situation in taxonomy with a focus on the challenges of identifying alien plant species and explore how this has affected the study of biological invasions. Biosecurity strategies, legislation dealing with invasive species, quarantine, weed surveillance and monitoring all depend on accurate and rapid identification of non-native taxa. However, such identification can be challenging because the taxonomic skill base in most countries is diffuse and lacks critical mass. Taxonomic resources are essential for the effective management of invasive plants and incorrect identifications can impede ecological studies. On the other hand, biological invasions have provided important tests of basic theories about species concepts. Better integration of classical alpha taxonomy and modern genetic taxonomic approaches will improve the accuracy of species identification and further refine taxonomic classification at the level of populations and genotypes in the field and laboratory. Modern taxonomy therefore needs to integrate both classical and new concepts and approaches. In particular, differing points of view between the proponents of morphological and molecular approaches should be negotiated because a narrow taxonomic perspective is harmful; the rigour of taxonomic decision-making clearly increases if insights from a variety of different complementary disciplines are combined and confronted. Taxonomy plays a critical role in the study of plant invasions and in turn benefits from the insights gained from these studies.
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Affiliation(s)
- Petr Pyšek
- Institute of Botany, Department of Invasion Ecology, Academy of Sciences of the Czech Republic, CZ-252 43 Průhonice, Czech Republic
- Department of Ecology, Faculty of Science, Charles University in Prague, Viničná 7, CZ-128 44 Prague, Czech Republic
| | - Philip E. Hulme
- The Bio-Protection Research Centre, Lincoln University, PO Box 84, Canterbury, New Zealand
| | - Laura A. Meyerson
- Department of Natural Resources Science, University of Rhode Island, 1 Greenhouse Road, Kingston, RI 02881, USA
| | - Gideon F. Smith
- South African National Biodiversity Institute, Biosystematics Research and Biodiversity Collections Division, Private Bag X101, Pretoria 0001, South Africa
- H. G. W. J. Schweickerdt Herbarium, Department of Plant Science, University of Pretoria, Pretoria 0002, South Africa
- Centre for Functional Ecology, Departamento de Ciências da Vida, Universidade de Coimbra, 3001-455 Coimbra, Portugal
| | - James S. Boatwright
- Department of Biodiversity and Conservation Biology, University of the Western Cape, Private Bag X17, Belville 7535, Cape Town, South Africa
| | - Neil R. Crouch
- Ethnobotany Unit, South African National Biodiversity Institute, PO Box 52099, 4007 Berea Road, Durban, South Africa
- School of Chemistry, University of KwaZulu-Natal, Durban 4041, South Africa
| | - Estrela Figueiredo
- Centre for Functional Ecology, Departamento de Ciências da Vida, Universidade de Coimbra, 3001-455 Coimbra, Portugal
- Department of Botany, Nelson Mandela Metropolitan University, PO Box 77000, Port Elizabeth 6031, South Africa
| | - Llewellyn C. Foxcroft
- Conservation Services, South African National Parks, Skukuza 1350, South Africa
- Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Matieland 7602, South Africa
| | - Vojtěch Jarošík
- Institute of Botany, Department of Invasion Ecology, Academy of Sciences of the Czech Republic, CZ-252 43 Průhonice, Czech Republic
- Department of Ecology, Faculty of Science, Charles University in Prague, Viničná 7, CZ-128 44 Prague, Czech Republic
| | - David M. Richardson
- Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Matieland 7602, South Africa
| | - Jan Suda
- Department of Botany, Faculty of Science, Charles University in Prague, Benátská 2, CZ-128 01 Prague, Czech Republic
- Institute of Botany, Laboratory of Flow Cytometry, Academy of Sciences of the Czech Republic, CZ-252 43 Průhonice, Czech Republic
| | - John R. U. Wilson
- Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Matieland 7602, South Africa
- South African National Biodiversity Institute, Kirstenbosch Research Centre, Invasive Species Programme, Claremont 7735, South Africa
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22
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Durdagi S, Scozzafava G, Vullo D, Sahin H, Kolayli S, Supuran CT. Inhibition of mammalian carbonic anhydrases I-XIV with grayanotoxin III: solution and in silico studies. J Enzyme Inhib Med Chem 2013; 29:469-75. [DOI: 10.3109/14756366.2013.804072] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Affiliation(s)
- Serdar Durdagi
- University of Calgary, Institute for Biocomplexity and Informatics
Calgary, ABCanada
- Bahcesehir University, Faculty of Medicine, Department of Biophysics
IstanbulTurkey
| | - Gabriele Scozzafava
- University of Florence, Dipartimento di Economia, Ingegneria, Scienze e Tecnologie Agrarie e Forestali
FlorenceItaly
| | - Daniela Vullo
- Università degli Studi di Firenze, Polo Scientifico, Laboratorio di Chimica Bioinorganica, Rm. 188, Via della Lastruccia 3, Sesto Fiorentino
FlorenceItaly
| | - Hüseyin Sahin
- Department of Chemistry, Faculty of Sciences, Karadeniz Technical University
TrabzonTurkey
| | - Sevgi Kolayli
- Department of Chemistry, Faculty of Sciences, Karadeniz Technical University
TrabzonTurkey
| | - Claudiu T. Supuran
- Università degli Studi di Firenze, Polo Scientifico, Laboratorio di Chimica Bioinorganica, Rm. 188, Via della Lastruccia 3, Sesto Fiorentino
FlorenceItaly
- University of Florence, Neurofarba Department, Sezione di Scienze Farmaceutiche
Via Ugo Schiff 6, 50019 Sesto Fiorentino, FlorenceItaly
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23
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Santini A, Ghelardini L, De Pace C, Desprez-Loustau ML, Capretti P, Chandelier A, Cech T, Chira D, Diamandis S, Gaitniekis T, Hantula J, Holdenrieder O, Jankovsky L, Jung T, Jurc D, Kirisits T, Kunca A, Lygis V, Malecka M, Marcais B, Schmitz S, Schumacher J, Solheim H, Solla A, Szabò I, Tsopelas P, Vannini A, Vettraino AM, Webber J, Woodward S, Stenlid J. Biogeographical patterns and determinants of invasion by forest pathogens in Europe. THE NEW PHYTOLOGIST 2013; 197:238-250. [PMID: 23057437 DOI: 10.1111/j.1469-8137.2012.04364.x] [Citation(s) in RCA: 220] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2012] [Accepted: 08/28/2012] [Indexed: 05/24/2023]
Abstract
A large database of invasive forest pathogens (IFPs) was developed to investigate the patterns and determinants of invasion in Europe. Detailed taxonomic and biological information on the invasive species was combined with country-specific data on land use, climate, and the time since invasion to identify the determinants of invasiveness, and to differentiate the class of environments which share territorial and climate features associated with a susceptibility to invasion. IFPs increased exponentially in the last four decades. Until 1919, IFPs already present moved across Europe. Then, new IFPs were introduced mainly from North America, and recently from Asia. Hybrid pathogens also appeared. Countries with a wider range of environments, higher human impact or international trade hosted more IFPs. Rainfall influenced the diffusion rates. Environmental conditions of the new and original ranges and systematic and ecological attributes affected invasiveness. Further spread of established IFPs is expected in countries that have experienced commercial isolation in the recent past. Densely populated countries with high environmental diversity may be the weakest links in attempts to prevent new arrivals. Tight coordination of actions against new arrivals is needed. Eradication seems impossible, and prevention seems the only reliable measure, although this will be difficult in the face of global mobility.
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Affiliation(s)
- A Santini
- Istituto per la Protezione delle Piante, C.N.R. Via Madonna del Piano, 10 50019, Sesto fiorentino, Firenze, Italy
| | - L Ghelardini
- Istituto per la Protezione delle Piante, C.N.R. Via Madonna del Piano, 10 50019, Sesto fiorentino, Firenze, Italy
| | - C De Pace
- Dipartimento di Scienze e Tecnologie per l'Agricoltura, le Foreste, la Natura e l'Energia (DAFNE), Università degli Studi della Tuscia, San Camillo de Lellis snc-01100, Viterbo, Italy
| | - M L Desprez-Loustau
- INRA Bordeaux, Domaine de l'Hermitage, Génétique et écologie des maladies en Forêt Pierroton, UMR 1202 BIOGECO, 69 route d'Arcachon, 33610, Cestas, France
| | - P Capretti
- Dipartimento di Biotecnologie agrarie, Università degli studi di Firenze, P.le Cascine, 28 50144, Firenze, Italy
| | - A Chandelier
- Department Biocontrol and Plant Genetic Resources, Walloon Agricultural Research Centre, Rue de Liroux, 4, B-5030, Gembloux, Belgium
| | - T Cech
- Department of Forest Protection, Unit of Phytopathology, Federal Research and Training Centre for Forests, Natural Hazards and Landscape (BFW), Seckendorff-Gudent-Weg 8, 1131, Vienna, Austria
| | - D Chira
- Institutul de Cercetari si Amenajari Silvice, Station of Brasov, Closca 13, 500040, Brasov, Romania
| | - S Diamandis
- National Agricultural Research Foundation, Forest Research Institute, 570 06, Vassilika, Thessaloniki, Greece
| | - T Gaitniekis
- Latvian State Forest Research Institute "Silava", 111 Rigas str, Salaspils, LV-2169, Latvia
| | - J Hantula
- Finnish Forest Research Institute, Jokiniemenkuja 1, PO Box 18, 01301, Vantaa, Finland
| | - O Holdenrieder
- Institut f. Integrative Biologie - CHN G 66, Universitätstrasse 16, 8092, Zürich, Switzerland
| | - L Jankovsky
- Department of Forest Protection and Wildlife Management, Faculty of Forestry and Wood Technology, Mendel University, Zemedelska 3, 613 00, Brno, Czech Republic
| | - T Jung
- Phytophthora Research and Consultancy, Thomastrasse 75, 83098, Brannenburg, Germany
| | - D Jurc
- Department for Forest Protection, Slovenian Forestry Institute, Večna pot 2, 1000, Ljubljana, Slovenia
| | - T Kirisits
- Department of Forest and Soil Sciences, Institute of Forest Entomology, Forest Pathology, and Forest Protection (IFFF), University of Natural Resources and Applied Life Sciences, Vienna (BOKU), Hasenauerstraße 38, 1190, Vienna, Austria
| | - A Kunca
- Forest Research Institute, T.G. Masaryka 22, 96092, Zvolen, Slovakia
| | - V Lygis
- Laboratory of Phytopathogenic Microorganisms, Institute of Botany of Nature Research Centre, 08406, Vilnius, Lithuania
| | - M Malecka
- Department of Forest Protection, Forest Research Institute, Sêkocin Stary, ul. Braci Leœnej 3, 05-090, Raszyn, Poland
| | - B Marcais
- INRA, UMR1136 Interactions Arbres-Microorganismes, Champenoux, France
| | - S Schmitz
- Department Biocontrol and Plant Genetic Resources, Walloon Agricultural Research Centre, Rue de Liroux, 4, B-5030, Gembloux, Belgium
| | - J Schumacher
- Department of Forest Protection, Forest Research Institute Baden-Wuerttemberg, Wonnhaldestrasse 4, D-79100, Freiburg, Germany
| | - H Solheim
- Norwegian Forest and Landscape Institute, PO Box 115, 1431, Ås, Norway
| | - A Solla
- Ingeniería Forestal y del Medio Natural, Universidad de Extremadura, Avenida Virgen del Puerto 2, 10600, Plasencia, Spain
| | - I Szabò
- Institute of Silviculture and Forest Protection, University of West-Hungary, Sopron, Hungary
| | - P Tsopelas
- NAGREF, Institute of Mediterranean Forest Ecosystems, Terma Alkmanos, 11528, Athens, Greece
| | - A Vannini
- Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), Università degli Studi della Tuscia, San Camillo de Lellis snc-01100, Viterbo, Italy
| | - A M Vettraino
- Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), Università degli Studi della Tuscia, San Camillo de Lellis snc-01100, Viterbo, Italy
| | - J Webber
- Forest Research, Forestry Commission, Alice Holt Lodge, Farnham, Surrey, GU10 4LH, UK
| | - S Woodward
- Department of Plant and Soil Science, Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen, AB24 3UU, UK
| | - J Stenlid
- Department of Forest Mycology and Pathology, Swedish University of Agricultural Sciences, PO Box 7026, 750 07, Uppsala, Sweden
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24
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Malo AF, Godsall B, Prebble C, Grange Z, McCandless S, Taylor A, Coulson T. Positive effects of an invasive shrub on aggregation and abundance of a native small rodent. Behav Ecol 2012. [DOI: 10.1093/beheco/ars202] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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25
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Qi XS, Chen C, Comes HP, Sakaguchi S, Liu YH, Tanaka N, Sakio H, Qiu YX. Molecular data and ecological niche modelling reveal a highly dynamic evolutionary history of the East Asian Tertiary relict Cercidiphyllum (Cercidiphyllaceae). THE NEW PHYTOLOGIST 2012; 196:617-630. [PMID: 22845876 DOI: 10.1111/j.1469-8137.2012.04242.x] [Citation(s) in RCA: 88] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
East Asia's temperate deciduous forests served as sanctuary for Tertiary relict trees, but their ages and response to past climate change remain largely unknown. To address this issue, we elucidated the evolutionary and population demographic history of Cercdiphyllum, comprising species in China/Japan (Cercdiphyllum japonicum) and central Japan (Cercdiphyllum magnificum). Fifty-three populations were genotyped using chloroplast and ribosomal DNA sequences and microsatellite loci to assess molecular structure and diversity in relation to past (Last Glacial Maximum) and present distributions based on ecological niche modelling. Late Tertiary climate cooling was reflected in a relatively recent speciation event, dated at the Mio-/Pliocene boundary. During glacials, the warm-temperate C. japonicum experienced massive habitat losses in some areas (north-central China/north Japan) but increases in others (southwest/-east China, East China Sea landbridge, south Japan). In China, the Sichuan Basin and/or the middle-Yangtze were source areas of postglacial northward recolonization; in Japan, this may have been facilitated through introgressive hybridization with the cool-temperate C. magnificum. Our findings challenge the notion of relative evolutionary and demographic stability of Tertiary relict trees, and may serve as a guideline for assessing the impact of Neogene climate change on the evolution and distribution of East Asian temperate plants.
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Affiliation(s)
- Xin-Shuai Qi
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, ChinaDepartment of Organismic Biology, Salzburg University, A-5020 Salzburg, AustriaDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 6068502, JapanDepartment of Plant Ecology, Forestry and Forest Products Research Institute, Matsunosato, Tsukuba, Ibaraki 305-8687, JapanField Centre for Sustainable Agriculture and Forestry, Faculty of Agriculture, Niigata University, 94-2 Koda, Sado, Niigata 952-2206, Japan
| | - Chen Chen
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, ChinaDepartment of Organismic Biology, Salzburg University, A-5020 Salzburg, AustriaDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 6068502, JapanDepartment of Plant Ecology, Forestry and Forest Products Research Institute, Matsunosato, Tsukuba, Ibaraki 305-8687, JapanField Centre for Sustainable Agriculture and Forestry, Faculty of Agriculture, Niigata University, 94-2 Koda, Sado, Niigata 952-2206, Japan
| | - Hans Peter Comes
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, ChinaDepartment of Organismic Biology, Salzburg University, A-5020 Salzburg, AustriaDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 6068502, JapanDepartment of Plant Ecology, Forestry and Forest Products Research Institute, Matsunosato, Tsukuba, Ibaraki 305-8687, JapanField Centre for Sustainable Agriculture and Forestry, Faculty of Agriculture, Niigata University, 94-2 Koda, Sado, Niigata 952-2206, Japan
| | - Shota Sakaguchi
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, ChinaDepartment of Organismic Biology, Salzburg University, A-5020 Salzburg, AustriaDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 6068502, JapanDepartment of Plant Ecology, Forestry and Forest Products Research Institute, Matsunosato, Tsukuba, Ibaraki 305-8687, JapanField Centre for Sustainable Agriculture and Forestry, Faculty of Agriculture, Niigata University, 94-2 Koda, Sado, Niigata 952-2206, Japan
| | - Yi-Hui Liu
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, ChinaDepartment of Organismic Biology, Salzburg University, A-5020 Salzburg, AustriaDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 6068502, JapanDepartment of Plant Ecology, Forestry and Forest Products Research Institute, Matsunosato, Tsukuba, Ibaraki 305-8687, JapanField Centre for Sustainable Agriculture and Forestry, Faculty of Agriculture, Niigata University, 94-2 Koda, Sado, Niigata 952-2206, Japan
| | - Nobuyuki Tanaka
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, ChinaDepartment of Organismic Biology, Salzburg University, A-5020 Salzburg, AustriaDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 6068502, JapanDepartment of Plant Ecology, Forestry and Forest Products Research Institute, Matsunosato, Tsukuba, Ibaraki 305-8687, JapanField Centre for Sustainable Agriculture and Forestry, Faculty of Agriculture, Niigata University, 94-2 Koda, Sado, Niigata 952-2206, Japan
| | - Hitoshi Sakio
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, ChinaDepartment of Organismic Biology, Salzburg University, A-5020 Salzburg, AustriaDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 6068502, JapanDepartment of Plant Ecology, Forestry and Forest Products Research Institute, Matsunosato, Tsukuba, Ibaraki 305-8687, JapanField Centre for Sustainable Agriculture and Forestry, Faculty of Agriculture, Niigata University, 94-2 Koda, Sado, Niigata 952-2206, Japan
| | - Ying-Xiong Qiu
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, ChinaDepartment of Organismic Biology, Salzburg University, A-5020 Salzburg, AustriaDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 6068502, JapanDepartment of Plant Ecology, Forestry and Forest Products Research Institute, Matsunosato, Tsukuba, Ibaraki 305-8687, JapanField Centre for Sustainable Agriculture and Forestry, Faculty of Agriculture, Niigata University, 94-2 Koda, Sado, Niigata 952-2206, Japan
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Challenges in predicting invasive reservoir hosts of emerging pathogens: mapping Rhododendron ponticum as a foliar host for Phytophthora ramorum and Phytophthora kernoviae in the UK. Biol Invasions 2012. [DOI: 10.1007/s10530-012-0305-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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27
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Wang T, Chen G, Zan Q, Wang C, Su YJ. AFLP genome scan to detect genetic structure and candidate loci under selection for local adaptation of the invasive weed Mikania micrantha. PLoS One 2012; 7:e41310. [PMID: 22829939 PMCID: PMC3400595 DOI: 10.1371/journal.pone.0041310] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2011] [Accepted: 06/25/2012] [Indexed: 11/18/2022] Open
Abstract
Why some species become successful invaders is an important issue in invasive biology. However, limited genomic resources make it very difficult for identifying candidate genes involved in invasiveness. Mikania micrantha H.B.K. (Asteraceae), one of the world's most invasive weeds, has adapted rapidly in response to novel environments since its introduction to southern China. In its genome, we expect to find outlier loci under selection for local adaptation, critical to dissecting the molecular mechanisms of invasiveness. An explorative amplified fragment length polymorphism (AFLP) genome scan was used to detect candidate loci under selection in 28 M. micrantha populations across its entire introduced range in southern China. We also estimated population genetic parameters, bottleneck signatures, and linkage disequilibrium. In binary characters, such as presence or absence of AFLP bands, if all four character combinations are present, it is referred to as a character incompatibility. Since character incompatibility is deemed to be rare in populations with extensive asexual reproduction, a character incompatibility analysis was also performed in order to infer the predominant mating system in the introduced M. micrantha populations. Out of 483 AFLP loci examined using stringent significance criteria, 14 highly credible outlier loci were identified by Dfdist and Bayescan. Moreover, remarkable genetic variation, multiple introductions, substantial bottlenecks and character compatibility were found to occur in M. micrantha. Thus local adaptation at the genome level indeed exists in M. micrantha, and may represent a major evolutionary mechanism of successful invasion. Interactions between genetic diversity, multiple introductions, and reproductive modes contribute to increase the capacity of adaptive evolution.
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Affiliation(s)
- Ting Wang
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
| | - Guopei Chen
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Qijie Zan
- Shenzhen Wildlife Rescue and Rehabilitation Center, Shenzhen, China
| | - Chunbo Wang
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Ying-juan Su
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
- * E-mail:
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Wu W, Zhou RC, Ni GY, Shen H, Ge XJ. Is a new invasive herb emerging? Molecular confirmation and preliminary evaluation of natural hybridization between the invasive Sphagneticola trilobata (Asteraceae) and its native congener S. calendulacea in South China. Biol Invasions 2012. [DOI: 10.1007/s10530-012-0269-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Uwimana B, D'Andrea L, Felber F, Hooftman DAP, Den Nijs HCM, Smulders MJM, Visser RGF, Van De Wiel CCM. A Bayesian analysis of gene flow from crops to their wild relatives: cultivated (Lactuca sativa L.) and prickly lettuce (L. serriola L.) and the recent expansion of L. serriola in Europe. Mol Ecol 2012; 21:2640-54. [PMID: 22512715 DOI: 10.1111/j.1365-294x.2012.05489.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Interspecific gene flow can lead to the formation of hybrid populations that have a competitive advantage over the parental populations, even for hybrids from a cross between crops and wild relatives. Wild prickly lettuce (Lactuca serriola) has recently expanded in Europe and hybridization with the related crop species (cultivated lettuce, L. sativa) has been hypothesized as one of the mechanisms behind this expansion. In a basically selfing species, such as lettuce, assessing hybridization in natural populations may not be straightforward. Therefore, we analysed a uniquely large data set of plants genotyped with SSR (simple sequence repeat) markers with two programs for Bayesian population genetic analysis, STRUCTURE and NewHybrids. The data set comprised 7738 plants, including a complete genebank collection, which provided a wide coverage of cultivated germplasm and a fair coverage of wild accessions, and a set of wild populations recently sampled across Europe. STRUCTURE analysis inferred the occurrence of hybrids at a level of 7% across Europe. NewHybrids indicated these hybrids to be advanced selfed generations of a hybridization event or of one backcross after such an event, which is according to expectations for a basically selfing species. These advanced selfed generations could not be detected effectively with crop-specific alleles. In the northern part of Europe, where the expansion of L. serriola took place, the fewest putative hybrids were found. Therefore, we conclude that other mechanisms than crop/wild gene flow, such as an increase in disturbed habitats and/or climate warming, are more likely explanations for this expansion.
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Bayram NA, Keles T, Durmaz T, Dogan S, Bozkurt E. A rare cause of atrial fibrillation: mad honey intoxication. J Emerg Med 2011; 43:e389-91. [PMID: 22056548 DOI: 10.1016/j.jemermed.2011.02.021] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2010] [Revised: 08/02/2010] [Accepted: 02/18/2011] [Indexed: 10/15/2022]
Abstract
BACKGROUND Mad honey intoxication occurs after ingestion of honey containing grayanotoxin. CASE REPORT We report the case of a 36-year-old man who ingested mad honey and developed atrial fibrillation. DISCUSSION Mad honey intoxication is often characterized by symptoms such as hypotension, bradycardia, and syncope. Patients may also experience gastrointestinal, neurologic, and cardiovascular symptoms due to intoxication. Cardiac rhythm abnormalities, including sinus bradycardia, atrioventricular blocks, and nodal rhythms, also may be observed. To our knowledge, this is the first case report of a 36-year old man developing atrial fibrillation with a slow ventricular response after mad honey ingestion.
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Affiliation(s)
- Nihal Akar Bayram
- Department of Cardiology, Ataturk Education and Research Hospital, Bilkent, Ankara, Turkey
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Erfmeier A, Tsaliki M, Roß CA, Bruelheide H. Genetic and phenotypic differentiation between invasive and native Rhododendron (Ericaceae) taxa and the role of hybridization. Ecol Evol 2011; 1:392-407. [PMID: 22393509 PMCID: PMC3287310 DOI: 10.1002/ece3.38] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2011] [Revised: 08/23/2011] [Accepted: 08/24/2011] [Indexed: 11/30/2022] Open
Abstract
Hybridization has been repeatedly put forward to explain the invasiveness of Rhododendron ponticum L. in the British Isles. The present study investigates the pattern of ecotypic differentiation and hybridization among native North American R. catawbiense and R. maximum, native R. ponticum from Georgia and Spain, and invasive R. ponticum from Ireland and aims to assess the contribution of hybridization for Rhododendron invasion in the British Isles. Six populations per taxon were analyzed with AFLP markers for genetic dissimilarity, subjected to germination and growth experiments, and tested for frost hardiness. We assessed variation in morphological and ecological characteristics to identify traits displaying evidence of hybridization, thus, promoting invasiveness. Molecular marker analyses revealed a clear distinction between North American R. catawbiense and R. maximum on the one hand, and all R. ponticum populations on the other hand, displaying a complete intermixture of native Spanish and invasive Irish populations. Multivariate analyses of traits revealed leaf length-width ratio, relative growth rates (RGRs) in leaf length, root biomass, and shoot-root ratio to significantly discriminate between the different taxa and unequivocally assigned invasive Irish R. ponticum to the Spanish phenotypes. While the Irish R. ponticum had similar growth traits as conspecific native R. ponticum provenances, germination and biomass allocation were more similar to North American R. catawbiense and R. maximum. Hybridization did not contribute to explaining invasiveness of R. ponticum in Ireland. The similarity in germination and biomass allocation of invasive Irish R. ponticum and North American species has evolved independently and can more probably be attributed to an independent shift within the Ponticum cluster in Ireland.
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Affiliation(s)
- Alexandra Erfmeier
- Institute of Biology/Geobotany and Botanical Garden, Martin Luther University Halle-WittenbergAm Kirchtor 1, D-06108 Halle, Germany
| | - Marina Tsaliki
- Vegetation Ecology and Conservation Biology, Institute of Ecology and Evolutionary Biology, Bremen UniversityLeobener Street, D-28359 Bremen, Germany
| | - Christel A Roß
- Institute of Biology/Geobotany and Botanical Garden, Martin Luther University Halle-WittenbergAm Kirchtor 1, D-06108 Halle, Germany
| | - Helge Bruelheide
- Institute of Biology/Geobotany and Botanical Garden, Martin Luther University Halle-WittenbergAm Kirchtor 1, D-06108 Halle, Germany
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Gaskin JF, Birken AS, Cooper DJ. Levels of novel hybridization in the saltcedar invasion compared over seven decades. Biol Invasions 2011. [DOI: 10.1007/s10530-011-0110-z] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Hooftman DAP, Flavell AJ, Jansen H, den Nijs HCM, Syed NH, Sørensen AP, Orozco-Ter Wengel P, van de Wiel CCM. Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development. Evol Appl 2011; 4:648-59. [PMID: 25568012 PMCID: PMC3352534 DOI: 10.1111/j.1752-4571.2011.00188.x] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2010] [Accepted: 03/28/2011] [Indexed: 12/01/2022] Open
Abstract
Gene escape from crops has gained much attention in the last two decades, as transgenes introgressing into wild populations could affect the latter's ecological characteristics. However, different genes have different likelihoods of introgression. The mixture of selective forces provided by natural conditions creates an adaptive mosaic of alleles from both parental species. We investigated segregation patterns after hybridization between lettuce (Lactuca sativa) and its wild relative, L. serriola. Three generations of hybrids (S1, BC1, and BC1S1) were grown in habitats mimicking the wild parent's habitat. As control, we harvested S1 seedlings grown under controlled conditions, providing very limited possibility for selection. We used 89 AFLP loci, as well as more recently developed dominant markers, 115 retrotransposon markers (SSAP), and 28 NBS loci linked to resistance genes. For many loci, allele frequencies were biased in plants exposed to natural field conditions, including over-representation of crop alleles for various loci. Furthermore, Linkage disequilibrium was locally changed, allegedly by selection caused by the natural field conditions, providing ample opportunity for genetic hitchhiking. Our study indicates that when developing genetically modified crops, a judicious selection of insertion sites, based on knowledge of selective (dis)advantages of the surrounding crop genome under field conditions, could diminish transgene persistence.
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Affiliation(s)
- Danny A P Hooftman
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam Amsterdam, The Netherlands ; Centre for Ecology and Hydrology Wallingford, UK
| | | | - Hans Jansen
- Biometris Wageningen UR, Wageningen, The Netherlands
| | - Hans C M den Nijs
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam Amsterdam, The Netherlands
| | | | | | - Pablo Orozco-Ter Wengel
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam Amsterdam, The Netherlands ; Keygene N.V Wageningen, The Netherlands
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Verlaque R, Affre L, Diadema K, Suehs CM, Médail F. Unexpected morphological and karyological changes in invasive Carpobrotus (Aizoaceae) in Provence (S-E France) compared to native South African species. C R Biol 2011; 334:311-9. [PMID: 21513901 DOI: 10.1016/j.crvi.2011.01.008] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2010] [Revised: 01/25/2011] [Accepted: 01/28/2011] [Indexed: 11/26/2022]
Abstract
Hybridization processes can lead to evolutionary changes, particularly in co-introduced congeneric plant species, such as Carpobrotus spp. which are recognized as invasive in Mediterranean climate regions. Morphological and karyological comparisons have therefore been made between native Carpobrotus edulis and C. acinaciformis in South Africa and their invasive counterparts in Provence (C. edulis and C. aff. acinaciformis). Morphological data exhibited the most significant differences in invasive C. aff. acinaciformis that forms a new phenotypic variant. Unexpected chromosomal restructuring has been highlighted for both taxa in Provence, with in particular a clear decrease in asymmetry, an increase in the intraspecific variability, and an interspecific convergence of karyotypes. These changes suggest a drift that has facilitated various crosses, and has been amplified through hybridization/introgression. Furthermore, several morphological and karyological transgressive characters have been found in the two invasive taxa. These results stress the important role and the rapidity of karyological changes in invasive processes.
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Affiliation(s)
- Régine Verlaque
- UMR CNRS IRD, institut méditerranéen d'écologie et de paléoécologie, université de Provence, centre St.-Charles, Marseille, France.
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Thomas CD. Translocation of species, climate change, and the end of trying to recreate past ecological communities. Trends Ecol Evol 2011; 26:216-21. [PMID: 21411178 DOI: 10.1016/j.tree.2011.02.006] [Citation(s) in RCA: 148] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2011] [Revised: 02/08/2011] [Accepted: 02/09/2011] [Indexed: 11/18/2022]
Abstract
Many of the species at greatest risk of extinction from anthropogenic climate change are narrow endemics that face insurmountable dispersal barriers. In this review, I argue that the only viable option to maintain populations of these species in the wild is to translocate them to other locations where the climate is suitable. Risks of extinction to native species in destination areas are small, provided that translocations take place within the same broad geographic region and that the destinations lack local endemics. Biological communities in these areas are in the process of receiving many hundreds of other immigrant species as a result of climate change; ensuring that some of the 'new' inhabitants are climate-endangered species could reduce the net rate of extinction.
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Affiliation(s)
- Chris D Thomas
- Department of Biology, University of York, York, UK, YO10 5YW.
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36
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Lü HY, Liu XF, Wei SP, Zhang YM. Epistatic association mapping in homozygous crop cultivars. PLoS One 2011; 6:e17773. [PMID: 21423630 PMCID: PMC3058038 DOI: 10.1371/journal.pone.0017773] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2010] [Accepted: 02/14/2011] [Indexed: 12/02/2022] Open
Abstract
The genetic dissection of complex traits plays a crucial role in crop breeding. However, genetic analysis and crop breeding have heretofore been performed separately. In this study, we designed a new approach that integrates epistatic association analysis in crop cultivars with breeding by design. First, we proposed an epistatic association mapping (EAM) approach in homozygous crop cultivars. The phenotypic values of complex traits, along with molecular marker information, were used to perform EAM. In our EAM, all the main-effect quantitative trait loci (QTLs), environmental effects, QTL-by-environment interactions and QTL-by-QTL interactions were included in a full model and estimated by empirical Bayes approach. A series of Monte Carlo simulations was performed to confirm the reliability of the new method. Next, the information from all detected QTLs was used to mine novel alleles for each locus and to design elite cross combination. Finally, the new approach was adopted to dissect the genetic basis of seed length in 215 soybean cultivars obtained, by stratified random sampling, from 6 geographic ecotypes in China. As a result, 19 main-effect QTLs and 3 epistatic QTLs were identified, more than 10 novel alleles were mined and 3 elite parental combinations, such as Daqingdou and Zhengzhou790034, were predicted.
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Affiliation(s)
- Hai-Yan Lü
- Section on Statistical Genomics, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, Jiangsu, China
- College of Information and Management Science, Henan Agricultural University, Zhengzhou, Henan, China
| | - Xiao-Fen Liu
- Section on Statistical Genomics, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, Jiangsu, China
| | - Shi-Ping Wei
- Section on Statistical Genomics, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, Jiangsu, China
| | - Yuan-Ming Zhang
- Section on Statistical Genomics, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, Jiangsu, China
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RUHSAM MARKUS, HOLLINGSWORTH PETERM, SQUIRRELL JANE, ENNOS RICHARDA. Significant differences in outcrossing rate, self-incompatibility, and inbreeding depression between two widely hybridizing species of Geum. Biol J Linn Soc Lond 2010. [DOI: 10.1111/j.1095-8312.2010.01552.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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38
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Facon B, Crespin L, Loiseau A, Lombaert E, Magro A, Estoup A. Can things get worse when an invasive species hybridizes? The harlequin ladybird Harmonia axyridis in France as a case study. Evol Appl 2010; 4:71-88. [PMID: 25567954 PMCID: PMC3352518 DOI: 10.1111/j.1752-4571.2010.00134.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2010] [Accepted: 04/26/2010] [Indexed: 10/28/2022] Open
Abstract
So far, only a few studies have explicitly investigated the consequences of admixture for the adaptative potential of invasive populations. We addressed this question in the invasive ladybird Harmonia axyridis. After decades of use as a biological control agent against aphids in Europe and North America, H. axyridis recently became invasive in four continents and has now spread widely in Europe. Despite this invasion, a flightless strain is still sold as a biological control agent in Europe. However, crosses between flightless and invasive individuals yield individuals able to fly, as the flightless phenotype is caused by a single recessive mutation. We investigated the potential consequences of admixture between invasive and flightless biological control individuals on the invasion in France. We used three complementary approaches: (i) population genetics, (ii) a mate-choice experiment, and (iii) a quantitative genetics experiment. The invasive French population and the biological control strain showed substantial genetic differentiation, but there are no reproductive barriers between the two. Hybrids displayed a shorter development time, a larger size and a higher genetic variance for survival in starvation conditions than invasive individuals. We discuss the potential consequences of our results with respect to the invasion of H. axyridis in Europe.
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Affiliation(s)
- Benoît Facon
- INRA-SPE, UMR Centre de Biologie et de Gestion des Populations Cedex, France
| | - Laurent Crespin
- Evolutionary Ecology Research Group, Department of Biology, University of Antwerp Antwerp, Belgium
| | - Anne Loiseau
- INRA-SPE, UMR Centre de Biologie et de Gestion des Populations Cedex, France
| | | | - Alexandra Magro
- ENFA, EDB (Laboratoire Evolution et Diversité Biologique), Université de Toulouse Tolosan, France ; EDB (Laboratoire Evolution et Diversité Biologique) CNRS, Toulouse, France
| | - Arnaud Estoup
- INRA-SPE, UMR Centre de Biologie et de Gestion des Populations Cedex, France
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40
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Abstract
Gene flow from diploid to polyploid species could have significant effects on the morphology and ecology of polyploids. The potential of such introgression for bringing about evolutionary change within polyploids has long been recognized, although there are few examples of the process in the wild. Here, we focus on introgression between the diploid species, Senecio squalidus, and the tetraploid, S. vulgaris, which resulted in the origin of a variant form of S. vulgaris that produces radiate rather than nonradiate flower heads. The radiate variant of S. vulgaris is more attractive to pollinators and has a higher outcrossing rate. We review recent work that has isolated and characterized two regulatory genes, RAY1 and RAY2, that control presence of ray florets in radiate flower heads, and which have been introgressed into S. vulgaris from S. squalidus in the recent past. We identify a copy of RAY2 in S. vulgaris (RAY2b) homeologous to the copy (RAY2a) previously isolated, thus providing further evidence that S. vulgaris is allotetraploid. We also show that the RAY2a-R allele, which is fixed in radiate S. vulgaris, occurs at intermediate frequency in S. squalidus. Thus, based on this result, it is not possible to distinguish whether radiate S. vulgaris originated once or multiple times following hybridization between nonradiate S. vulgaris and S. squalidus.
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Dechaine JM, Burger JC, Chapman MA, Seiler GJ, Brunick R, Knapp SJ, Burke JM. Fitness effects and genetic architecture of plant-herbivore interactions in sunflower crop-wild hybrids. THE NEW PHYTOLOGIST 2009; 184:828-41. [PMID: 19656303 DOI: 10.1111/j.1469-8137.2009.02964.x] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
*Introgression of cultivar alleles into wild plant populations via crop-wild hybridization is primarily governed by their fitness effects as well as those of linked loci. The fitness of crop-wild hybrids is often dependent on environmental factors, but less is understood about how aspects of the environment affect individual cultivar alleles. *This study investigated the effects of naturally occurring herbivory on patterns of phenotypic selection and the genetic architecture of plant-herbivore interactions in an experimental sunflower crop-wild hybrid population in two locales. *Phenotypic selection analyses suggested that cultivar alleles conferring increased size were generally favored, but at one site cultivar-like flowering time was favored only if three types of herbivory were included in the selection model. Quantitative trait locus (QTL) mapping identified three regions in which the cultivar allele conferred a selective advantage for a number of co-localized traits. Quantitative trait loci for several measures of insect herbivory were detected and, although the cultivar allele increased herbivory damage at the majority of these QTLs, they rarely colocalized with advantageous cultivar alleles for morphological traits. *These results suggest that a subset of cultivar traits/alleles are advantageous in natural environments but that herbivory may mitigate the selective advantage of some cultivar alleles.
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42
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Beatty GE, Philipp M, Provan J. Unidirectional hybridization at a species’ range boundary: implications for habitat tracking. DIVERS DISTRIB 2009. [DOI: 10.1111/j.1472-4642.2009.00616.x] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Hooftman DAP, Hartman Y, Oostermeijer JGB, Den Nijs HJCM. Existence of vigorous lineages of crop-wild hybrids in Lettuce under field conditions. ENVIRONMENTAL BIOSAFETY RESEARCH 2009; 8:203-17. [PMID: 20883659 DOI: 10.1051/ebr/2010001] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2010] [Accepted: 06/20/2010] [Indexed: 01/27/2023]
Abstract
Plant to plant gene flow is a route of environmental exposure for GM plants specifically since crosses with wild relatives could lead to the formation of more vigorous hybrids, which could increase the rate of introgression and the environmental impact. Here, we test the first step in the process of potential transgene introgression: whether hybrid vigor can be inherited to the next generation, which could lead to fixation of altered, i.e., elevated, quantitative traits. The potential for a permanent elevated fitness was tested using individual autogamous progeny lineages of hybrids between the crop Lactuca sativa (Lettuce) and the wild species Lactuca serriola (Prickly Lettuce). We compared progeny from motherplants grown under either greenhouse or field conditions. The survival of young plants depended strongly on maternal environment. Furthermore, we observed that offspring reproductive fitness components were correlated with maternal fitness. Our study demonstrates that post-zygotic genotypic sorting at the young plants stage reduces the number of genotypes non-randomly, leading to inheritance of high levels of reproductive traits in the surviving hybrid lineages, compared to the pure wild relatives. Consequently, directional selection could lead to displacement of the pure wild relative and fixation of more vigorous genome segments originating from crops, stabilizing plant traits at elevated levels. Such information can be used to indentify segments which are less likely to introgress into wild relative populations as a target for transgene insertion.
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Affiliation(s)
- Danny A P Hooftman
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, The Netherlands.
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44
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Ridley CE, Ellstrand NC. Rapid evolution of morphology and adaptive life history in the invasive California wild radish (Raphanus sativus) and the implications for management. Evol Appl 2009; 3:64-76. [PMID: 25567904 PMCID: PMC3352453 DOI: 10.1111/j.1752-4571.2009.00099.x] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2009] [Accepted: 08/08/2009] [Indexed: 11/26/2022] Open
Abstract
Understanding the evolution and demography of invasive populations may be key for successful management. In this study, we test whether or not populations of the non-native, hybrid-derived California wild radish have regionally adapted to divergent climates over their 150-year history in California and determine if population demographic dynamics might warrant different region-specific strategies for control. Using a reciprocal transplant approach, we found evidence for genetically based differences both between and among northern, coastal and southern, inland populations of wild radish. Individual fitness was analyzed using a relatively new statistical method called ‘aster modeling’ which integrates temporally sequential fitness measurements. In their respective home environments, fitness differences strongly favored southern populations and only slightly favored northern populations. Demographic rates of transition and sensitivities also differed between regions of origin, suggesting that the most effective approach for reducing overall population growth rate would be to target different life-history stages in each region.
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Affiliation(s)
- Caroline E Ridley
- Department of Botany and Plant Sciences, University of California Riverside Riverside, CA, USA
| | - Norman C Ellstrand
- Department of Botany and Plant Sciences, University of California Riverside Riverside, CA, USA
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45
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Invasibility or invasiveness? Effects of habitat, genotype, and their interaction on invasive Rhododendron ponticum populations. Biol Invasions 2009. [DOI: 10.1007/s10530-009-9472-x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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46
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47
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Introgression between invasive saltcedars (Tamarix chinensis and T. ramosissima) in the USA. Biol Invasions 2008. [DOI: 10.1007/s10530-008-9384-1] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Abbott RJ, Brennan AC, James JK, Forbes DG, Hegarty MJ, Hiscock SJ. Recent hybrid origin and invasion of the British Isles by a self-incompatible species, Oxford ragwort (Senecio squalidus L., Asteraceae). Biol Invasions 2008. [DOI: 10.1007/s10530-008-9382-3] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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49
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Niinemets U, Peñuelas J. Gardening and urban landscaping: significant players in global change. TRENDS IN PLANT SCIENCE 2008; 13:60-65. [PMID: 18262823 DOI: 10.1016/j.tplants.2007.11.009] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2007] [Revised: 11/21/2007] [Accepted: 11/21/2007] [Indexed: 05/25/2023]
Abstract
Global warming leads to shifts in vegetation types in given temperate environments. The fastest species movement is due to the globalized supply and use of exotic plants in gardening and urban landscaping. These standard practices circumvent dispersal limitations and biological and environmental stresses; they have three major global impacts: (i) the enhancement of biological invasions, (ii) the elevation of volatile organic compound emissions and the resulting increase in photochemical smog formation, and (iii) the enhancement of CO(2) fixation and water use by gardened plants. These global effects, none of which are currently considered in global-change scenarios, are increasingly amplified with further warming and urbanization. We urge for quantitative assessment of the global effects of gardening and urban landscaping.
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Affiliation(s)
- Ulo Niinemets
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 1, Tartu 51014, Estonia
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50
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Sørensen BS, Kiaer LP, Jørgensen RB, Hauser TP. The temporal development in a hybridizing population of wild and cultivated chicory (Cichorium intybus L.). Mol Ecol 2007; 16:3292-8. [PMID: 17688533 DOI: 10.1111/j.1365-294x.2007.03346.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hybridization and its possible impacts is a subject of increased attention in connection with the risk of unintended gene flow from cultivated (including genetically modified) plants to wild relatives. Whether such gene flow by hybridization is likely to take place depends among other things on the persistence of the hybrids in a natural environment over time. To evaluate this, we studied an experimental hybridizing population of wild and cultivated chicories (Cichorium intybus) relative to a previous study on the same population 2 years earlier. We compared the genetic composition, morphology and fitness traits of plants from 2004 to the plants in the same plot in 2002. The majority of the plants in 2004 was more morphologically and genetically intermediate than in 2002. This indicates that no selection towards being wild-like or cultivar-like was present over the period of 2 years. Furthermore, no distinct fitness differences existed between the plants of 2004, probably due to most of the plants being intermediate. No hybridization barriers appeared to be present between wild and cultivated chicories beyond the F1 generation, since F2 hybrids and backcrosses were in abundance; in fact, hybrids of probably fourth or fifth generation were present. In conclusion, all results indicate that no barriers exist to the temporal persistence of chicory hybrids in a natural environment.
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Affiliation(s)
- B S Sørensen
- Biosystems Department, Risø National Laboratory, Frederiksborgvej 399, DK-4000 Roskilde, Denmark
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