1
|
Gadd GM, Fomina M, Pinzari F. Fungal biodeterioration and preservation of cultural heritage, artwork, and historical artifacts: extremophily and adaptation. Microbiol Mol Biol Rev 2024; 88:e0020022. [PMID: 38179930 PMCID: PMC10966957 DOI: 10.1128/mmbr.00200-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Accepted: 09/11/2023] [Indexed: 01/06/2024] Open
Abstract
SUMMARYFungi are ubiquitous and important biosphere inhabitants, and their abilities to decompose, degrade, and otherwise transform a massive range of organic and inorganic substances, including plant organic matter, rocks, and minerals, underpin their major significance as biodeteriogens in the built environment and of cultural heritage. Fungi are often the most obvious agents of cultural heritage biodeterioration with effects ranging from discoloration, staining, and biofouling to destruction of building components, historical artifacts, and artwork. Sporulation, morphological adaptations, and the explorative penetrative lifestyle of filamentous fungi enable efficient dispersal and colonization of solid substrates, while many species are able to withstand environmental stress factors such as desiccation, ultra-violet radiation, salinity, and potentially toxic organic and inorganic substances. Many can grow under nutrient-limited conditions, and many produce resistant cell forms that can survive through long periods of adverse conditions. The fungal lifestyle and chemoorganotrophic metabolism therefore enable adaptation and success in the frequently encountered extremophilic conditions that are associated with indoor and outdoor cultural heritage. Apart from free-living fungi, lichens are a fungal growth form and ubiquitous pioneer colonizers and biodeteriogens of outdoor materials, especially stone- and mineral-based building components. This article surveys the roles and significance of fungi in the biodeterioration of cultural heritage, with reference to the mechanisms involved and in relation to the range of substances encountered, as well as the methods by which fungal biodeterioration can be assessed and combated, and how certain fungal processes may be utilized in bioprotection.
Collapse
Affiliation(s)
- Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, United Kingdom
- State Key Laboratory of Heavy Oil Processing, Beijing Key Laboratory of Oil and Gas Pollution Control, College of Chemical Engineering and Environment, China University of Petroleum, Beijing, China
| | - Marina Fomina
- Zabolotny Institute of Microbiology and Virology, National Academy of Sciences of Ukraine, Kyiv, Ukraine
- National Reserve “Sophia of Kyiv”, Kyiv, Ukraine
| | - Flavia Pinzari
- Institute for Biological Systems (ISB), Council of National Research of Italy (CNR), Monterotondo (RM), Italy
- Natural History Museum, London, United Kingdom
| |
Collapse
|
2
|
Hagiuda R, Itagaki T, Hirose D. Aspergillus verrucosus sp. nov., a xerophilic species isolated from house dust and honey in Japan. Int J Syst Evol Microbiol 2023; 73. [PMID: 36821367 DOI: 10.1099/ijsem.0.005727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023] Open
Abstract
Three strains of a xerophilic Aspergillus species were isolated from house dust and honey in Japan. A molecular phylogenetic analysis based on the combined dataset for four regions (internal transcribed spacer rDNA, calmodulin, β-tubulin, and RNA polymerase II second largest subunit) revealed that the strains formed an independent lineage, sister to Aspergillus halophilicus classified in section Restricti. Morphological comparisons show that the strains differ from A. halophilicus in three aspects: (i) the size of cleistothecia, as well as the surface structure and size of ascospores, (ii) the ability to grow on Harrold's agar and dichloran 18 % glycerol agar, and (iii) the lack of conidiophore formation on potato dextrose agar +20 % NaCl. These strains could be clearly distinguished from all known Aspergillus section Restricti species. Therefore, we consider it to be a novel species and propose the name Aspergillus verrucosus sp. nov. (NBRC 115547T).
Collapse
Affiliation(s)
- Ryo Hagiuda
- School of Pharmacy, Nihon University, 7‒7‒1 Narashinodai, Funabashi, Chiba 274‒8555, Japan
| | - Tadashi Itagaki
- School of Pharmacy, Nihon University, 7‒7‒1 Narashinodai, Funabashi, Chiba 274‒8555, Japan
| | - Dai Hirose
- School of Pharmacy, Nihon University, 7‒7‒1 Narashinodai, Funabashi, Chiba 274‒8555, Japan
| |
Collapse
|
3
|
Biophysical Manipulation of the Extracellular Environment by Eurotium halophilicum. Pathogens 2022; 11:pathogens11121462. [PMID: 36558795 PMCID: PMC9781259 DOI: 10.3390/pathogens11121462] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 11/25/2022] [Accepted: 11/28/2022] [Indexed: 12/12/2022] Open
Abstract
Eurotium halophilicum is psychrotolerant, halophilic, and one of the most-extreme xerophiles in Earth's biosphere. We already know that this ascomycete grows close to 0 °C, at high NaCl, and-under some conditions-down to 0.651 water-activity. However, there is a paucity of information about how it achieves this extreme stress tolerance given the dynamic water regimes of the surface habitats on which it commonly occurs. Here, against the backdrop of global climate change, we investigated the biophysical interactions of E. halophilicum with its extracellular environment using samples taken from the surfaces of library books. The specific aims were to examine its morphology and extracellular environment (using scanning electron microscopy for visualisation and energy-dispersive X-ray spectrometry to identify chemical elements) and investigate interactions with water, ions, and minerals (including analyses of temperature and relative humidity conditions and determinations of salt deliquescence and water activity of extracellular brine). We observed crystals identified as eugsterite (Na4Ca(SO4)3·2H2O) and mirabilite (Na2SO4·10H2O) embedded within extracellular polymeric substances and provide evidence that E. halophilicum uses salt deliquescence to maintain conditions consistent with its water-activity window for growth. In addition, it utilizes a covering of hair-like microfilaments that likely absorb water and maintain a layer of humid air adjacent to the hyphae. We believe that, along with compatible solutes used for osmotic adjustment, these adaptations allow the fungus to maintain hydration in both space and time. We discuss these findings in relation to the conservation of books and other artifacts within the built environment, spoilage of foods and feeds, the ecology of E. halophilicum in natural habitats, and the current episode of climate change.
Collapse
|
4
|
Rodríguez-Andrade E, Stchigel AM, Cano-Lira JF. New Xerophilic Species of Penicillium from Soil. J Fungi (Basel) 2021; 7:126. [PMID: 33572300 PMCID: PMC7915375 DOI: 10.3390/jof7020126] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2021] [Revised: 02/01/2021] [Accepted: 02/07/2021] [Indexed: 11/16/2022] Open
Abstract
Soil is one of the main reservoirs of fungi. The aim of this study was to study the richness of ascomycetes in a set of soil samples from Mexico and Spain. Fungi were isolated after 2% w/v phenol treatment of samples. In that way, several strains of the genus Penicillium were recovered. A phylogenetic analysis based on internal transcribed spacer (ITS), beta-tubulin (BenA), calmodulin (CaM), and RNA polymerase II subunit 2 gene (rpb2) sequences showed that four of these strains had not been described before. Penicillium melanosporum produces monoverticillate conidiophores and brownish conidia covered by an ornate brown sheath. Penicillium michoacanense and Penicillium siccitolerans produce sclerotia, and their asexual morph is similar to species in the section Aspergilloides (despite all of them pertaining to section Lanata-Divaricata). P. michoacanense differs from P. siccitolerans in having thick-walled peridial cells (thin-walled in P. siccitolerans). Penicillium sexuale differs from Penicillium cryptum in the section Crypta because it does not produce an asexual morph. Its ascostromata have a peridium composed of thick-walled polygonal cells, and its ascospores are broadly lenticular with two equatorial ridges widely separated by a furrow. All four new species are xerophilic. Despite the genus Penicillium containing more than 480 known species, they are rarely reported as xerophilic.
Collapse
Affiliation(s)
| | - Alberto M. Stchigel
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili (URV), Sant Llorenç 21, Reus, 43201 Tarragona, Spain; (E.R.-A.); (J.F.C.-L.)
| | | |
Collapse
|
5
|
Affiliation(s)
- C. M. Christensen
- Department of Plant Pathology and Physiology Minnesota Agricultural Experiment Station St. Paul, Minnesota and Crops Research Division Plant Industry Station Beltsville, Maryland
| | - L. C. López F.
- Department of Plant Pathology and Physiology Minnesota Agricultural Experiment Station St. Paul, Minnesota and Crops Research Division Plant Industry Station Beltsville, Maryland
| | - C. R. Benjamin
- Department of Plant Pathology and Physiology Minnesota Agricultural Experiment Station St. Paul, Minnesota and Crops Research Division Plant Industry Station Beltsville, Maryland
| |
Collapse
|
6
|
Abstract
Aspergillus section Restricti together with sister section Aspergillus (formerly Eurotium) comprises xerophilic species, that are able to grow on substrates with low water activity and in extreme environments. We adressed the monophyly of both sections within subgenus Aspergillus and applied a multidisciplinary approach for definition of species boundaries in sect. Restricti. The monophyly of sections Aspergillus and Restricti was tested on a set of 102 isolates comprising all currently accepted species and was strongly supported by Maximum likelihood (ML) and Bayesian inferrence (BI) analysis based on β-tubulin (benA), calmodulin (CaM) and RNA polymerase II second largest subunit (RPB2) loci. More than 300 strains belonging to sect. Restricti from various isolation sources and four continents were characterized by DNA sequencing, and 193 isolates were selected for phylogenetic analyses and phenotypic studies. Species delimitation methods based on multispecies coalescent model were employed on DNA sequences from four loci, i.e., ID region of rDNA (ITS + 28S), CaM, benA and RPB2, and supported recognition of 21 species, including 14 new. All these species were also strongly supported in ML and BI analyses. All recognised species can be reliably identified by all four examined genetic loci. Phenotype analysis was performed to support the delimitation of new species and includes colony characteristics on seven cultivation media incubated at several temperatures, growth on an osmotic gradient (six media with NaCl concentration from 0 to 25 %) and analysis of morphology including scanning electron microscopy. The micromorphology of conidial heads, vesicle dimensions, temperature profiles and growth parameters in osmotic gradient were useful criteria for species identification. The vast majority of species in sect. Restricti produce asperglaucide, asperphenamate or both in contrast to species in sect. Aspergillus. Mycophenolic acid was detected for the first time in at least six members of the section. The ascomata of A. halophilicus do not contain auroglaucin, epiheveadride or flavoglaucin which are common in sect. Aspergillus, but shares the echinulins with sect. Aspergillus.
Collapse
Key Words
- Aspergillus canadensis Visagie, Yilmaz, F. Sklenar & Seifert
- Aspergillus clavatophorus F. Sklenar, S.W. Peterson & Hubka
- Aspergillus destruens Zalar, F. Sklenar, S.W. Peterson & Hubka
- Aspergillus domesticus F. Sklenar, Houbraken, Zalar & Hubka
- Aspergillus glabripes F. Sklenar, Ž. Jurjević & Hubka
- Aspergillus hordei F. Sklenar, S.W. Peterson & Hubka
- Aspergillus infrequens F. Sklenar, S.W. Peterson & Hubka
- Aspergillus magnivesiculatus F. Sklenar, Zalar, Ž. Jurjević & Hubka
- Aspergillus pachycaulis F. Sklenar, S.W. Peterson, Ž. Jurjević & Hubka
- Aspergillus penicillioides
- Aspergillus pseudogracilis F. Sklenar, Ž. Jurjević & Hubka
- Aspergillus restrictus
- Aspergillus reticulatus F. Sklenar, Ž. Jurjević, S.W. Peterson & Hubka
- Aspergillus salinicola Zalar, F. Sklenar, Visagie & Hubka
- Aspergillus tardicrescens F. Sklenar, Houbraken, Zalar, & Hubka
- Aspergillus villosus F. Sklenar, S.W. Peterson & Hubka
- Eurotium
- food spoilage
- indoor fungi
- linear discriminant analysis
- multigene phylogeny
- multispecies coalescent model
- sick building syndrome
- xerophilic fungi
Collapse
|
7
|
|
8
|
Mert HH, Ekmekçi S. The effect of salinity and osmotic pressure of the medium on the growth, sporulation and changes in the total organic acid content of Aspergillus flavus and Penicillium chrysogenum. Mycopathologia 1987; 100:85-9. [PMID: 3122048 DOI: 10.1007/bf00467099] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Extreme conditions of a medium effects the growth of microorganisms. The effect of salinity (NaCl) and osmotic pressure on the vegetative and reproductive growth as well as on changes in the amount of total organic acid of Aspergillus flavus and Penicillium chrysogenum; isolated from the soil; have been studied in this investigation. The vegetative growth of both species increased with an increase in the NaCl content of the nutrient medium. The maximum increase was observed in A. flavus in the nutrient medium containing 9% NaCl, as compared to the control. On the other hand the salinity and the osmotic pressure values, depending on the changes in the salinity; had inhibitive effects on the production of conidia of A. flavus and stimulative effects on those of Penicillium chrysogenum. P. chrysogenum for maximum production of conidia was observed in the nutrient medium containing 1% NaCl whereas maximum vegetative growth was recorded in the nutrient medium containing 9% NaCl. However, no definite results were obtained concerning a parallelity between the increase in vegetative and reproductive growth. In view of these observations, for a production of total organic acid incubation medium of the fungal species, each species must reach a particular conidia production, and salinity and osmotic pressure of the medium effects their production differently depending on the species.
Collapse
Affiliation(s)
- H H Mert
- Biology Department, Faculty of Education, Dokuz Eylül University, Buca Izmir, Turkey
| | | |
Collapse
|
9
|
|
10
|
Samson RA, van der Lustgraaf B. Aspergillus penicilloides and Eurotium halophilicum in association with house-dust mites. Mycopathologia 1978; 64:13-6. [PMID: 714145 DOI: 10.1007/bf00443082] [Citation(s) in RCA: 36] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Aspergillus penicilloides Speg., Eurotium halophilicum Christensen et al. and other xerophilic fungi were isolated from house dust. The isolates of E. halophilicum are described and compared with the type strain of this species. A. penicilloides appeared to be rather common. The species concept of this species is broadened to accomodate some variable forms with different colony characters and conidophore structures. The role of both species is discussed in connection with house-dust mites, house-dust allergy and skin diseases.
Collapse
|
11
|
Rai JN, Agarwal SC. Increased osmotic tolerance of some aspergilli isolated from 'Usar' (alkaline) soils--a possible indication of ecological specialization. MYCOPATHOLOGIA ET MYCOLOGIA APPLICATA 1974; 52:299-305. [PMID: 4407838 DOI: 10.1007/bf02198758] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
|
12
|
Abdalla MH. Preliminary study on the influence of fungal metabolites on germination of barley grains. MYCOPATHOLOGIA ET MYCOLOGIA APPLICATA 1970; 41:307-13. [PMID: 5493702 DOI: 10.1007/bf02051110] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
|
13
|
|
14
|
|
15
|
BLEUL I. Studien zur Morphologie und Physiologie der Sterigmenproliferation bei Aspergillus amstelodami (Mangin) Thom and Church. Arch Microbiol 1962; 44:23-46. [PMID: 13869986 DOI: 10.1007/bf00409579] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|