A simple method to estimate photosynthetic radiation use efficiency of canopies

Improved agricultural Water management in data-scarce semi-arid watersheds: Value of integrating remotely sensed leaf area index in hydrological modeling

In watersheds located in semi-arid regions, vegetation dynamics, evapotranspiration (ET), and associated water and energy balances collectively play a major role in controlling hydrological regimes and crop yield. As such, it is challenging to predict the complex hydrological processes and biophysical dynamics. This challenge increases in areas with limited data availability. The key objective of this study was to evaluate the direct integration of remotely sensed Leaf Area Index (LAI) data into a hydrological model to improve streamflow, ET, and crop yield estimates. We also demonstrated how an improved model integrated with remotely sensed LAI data can inform water managers by predicting water productivity (WP) under different irrigation schemes. We took agricultural-dominated San Joaquin Watershed in California, United States, as our testbed and integrated the Moderate Resolution Imaging Spectroradiometer (MODIS) 500-m resolution 4-day total LAI data into the SWAT (Soil and Water Assessment Tool) model. Results showed that, compared to conventional SWAT model that relies on semi-empirical equations and user inputs for simulating biophysical processes, direct LAI integration into SWAT model (SWAT-LAI) notably captured the actual vegetation dynamics and improved ET and crop yield estimations. The WP simulated by the improved SWAT-LAI model for almond and grape yields varied within a range from 0.363 to 3.81 kg/m³ and 0.32 to 4.76 kg/m³ across different irrigation applications. The outcomes of this study showed that deficit irrigation application could be a viable option in water stressed regions, since it can save a substantial amount of irrigation water and maintain the higher water productivity required for both almond and grape yield production. This study shows an evidence of how remotely sensed data integrated into hydrological models can serve as a decision support tool by providing quantitative information on crop water use and crop production.

A parsimonious mechanistic model of reproductive and vegetative growth in fruit trees predicts consequences of fruit thinning and branch pruning

Productivity of fruit tree crops depends on the interaction between plant physiology, environmental conditions and agricultural practices. We develop a mechanistic model of fruit tree crops that reliable simulates the dynamics of variables of interest for growers and consequences of agricultural practices while relying on a minimal number of inputs and parameters. The temporal dynamics of carbon content in the different organs (i.e., shoots-S, roots-R and fruits-F) are the result of photosynthesis by S, nutrient supply by R, respiration by S, R and F, competition among different organs, photoperiod and initial system conditions partially controlled by cultural practices. We calibrate model parameters and evaluate model predictions using unpublished data from a peach (Prunus persica) experimental orchard with trees subjected to different levels of branch pruning and fruit thinning. Fiinally, we evaluate the consequences of different combinations of pruning and thinning intensities within a multi-criteria analysis. The predictions are in good agreement with the experimental measurements and for the different conditions (pruning and thinning). Our simulations indicate that thinning and pruning practices actually used by growers provide the best compromise between total shoot production, which impacts next year's abundance of shoots and fruits, and current year's fruit production in terms of quantity (yield) and quality (average fruit size). This suggests that growers are not only interested in maximizing current year's yield but also in its quality and its durability. The present work provides for modelers a system of equations based on acknowledged principles of plant science easily modifiable for different purposes. For horticulturists, it gives insights on the potentialities of pruning and thinning. For ecologists, it provides a transparent quantitative framework that can be coupled with biotic and abiotic stressors.

Influence of semi-arid environment on radiation use efficiency and other growth attributes of lentil crop

Solar radiation (SR) is essential for yield improvement in lentil, which is a crop of marginal environments. Herein, experiments were conducted over 2 years under a semi-arid environment to study the radiation interception (RI), efficiency, growth, and development of three lentil genotypes (Punjab Masoor-2009 (PM-2009), NIAB Masoor-2006 (NM-2006), and NIAB Masoor-2002 (NM-2002)) in relation to three nitrogen rates (13, 19, and 25 kg ha^-1). Seasonal dynamics of intercepted photoactive radiation (IPAR) and cumulated photosynthetic photon flux density were highly associated with seasonal dynamics of leaf area index (LAI), with a high value of R² (0.93 and 0.89) across all nitrogen rates and genotypes in both years. Nitrogen application promoted growth, and maximum LAI (3.97 and 3.57) and RI (324 and 301 MJ m^-2) were attained for the first and second years of study, respectively. Biomass and yield were positively associated with IPAR. Variation in radiation absorption (RA) among genotypes was due to different patterns of LAI development. In both years, yield (23% and 25%) and radiation use efficiency (RUE) for grain yield (0.44 and 0.37 g MJ^-1) were respectively higher for PM-2009 than for the other genotypes. Genotype PM-2009 had 15 days shorter crop cycle than others while 14% higher GDDs accumulated in the first year compared with the second due to the higher temperature. High nitrogen (25 kg ha^-1) application resulted in higher dry matter (DM), and grain yield (GY), while RUE and PAR were not statistically different under 19 kg N ha^-1 application across years. Genotypes PM-2009 and NM-2006 may perform reasonably well under arid to semi-arid regions at farmer field. These findings may assist researchers and crop modelers to optimize the lentil ideotype for efficient light utilization.

Dynamic Crop Models and Remote Sensing Irrigation Decision Support Systems: A Review of Water Stress Concepts for Improved Estimation of Water Requirements

Novel technologies for estimating crop water needs include mainly remote sensing evapotranspiration estimates and decision support systems (DSS) for irrigation scheduling. This work provides several examples of these approaches, that have been adjusted and modified over the years to provide a better representation of the soil–plant–atmosphere continuum and overcome their limitations. Dynamic crop simulation models synthetize in a formal way the relevant knowledge on the causal relationships between agroecosystem components. Among these, plant–water–soil relationships, water stress and its effects on crop growth and development. Crop models can be categorized into (i) water-driven and (ii) radiation-driven, depending on the main variable governing crop growth. Water stress is calculated starting from (i) soil water content or (ii) transpiration deficit. The stress affects relevant features of plant growth and development in a similar way in most models: leaf expansion is the most sensitive process and is usually not considered when planning irrigation, even though prolonged water stress during canopy development can consistently reduce light interception by leaves; stomatal closure reduces transpiration, directly affecting dry matter accumulation and therefore being of paramount importance for irrigation scheduling; senescence rate can also be increased by severe water stress. The mechanistic concepts of crop models can be used to improve existing simpler methods currently integrated in irrigation management DSS, provide continuous simulations of crop and water dynamics over time and set predictions of future plant–water interactions. Crop models can also be used as a platform for integrating information from various sources (e.g., with data assimilation) into process-based simulations.

Investigating tree and fruit growth through functional-structural modelling: implications of carbon autonomy at different scales

BACKGROUND AND AIMS

Many experimental studies assume that some topological units are autonomous with regard to carbon because it is convenient. Some plant models simulate carbon allocation, employing complex approaches that require calibration and fitted parameters. For whole-tree canopy simulations, simpler carbon allocation models can provide useful insights.

METHODS

We propose a new method for simulating carbon allocation in the whole tree canopy considering various scales of carbon autonomy, i.e. branchlets, branches, limbs, and no autonomy. This method was implemented in a functional-structural plant model of growth of individual organs for studying macadamia tree growth during one growing season.

KEY RESULTS

This model allows the simulation of various scales of carbon autonomy in a simple tree canopy, showing organ within-tree variability according to the scale of autonomy. Using a real tree canopy, we observed differences in growth variability within the tree and in tree growth, with several scales of carbon autonomy. The simulations that assumed autonomy at branch scale, i.e. 2-year-old wood, showed the most realistic results.

CONCLUSIONS

Simulations using this model were employed to investigate and explain aspects of differences in carbon autonomy between trees, organ growth variability, competition between shoot and fruit growth, and time of autonomy.

Determination of the most effective design for the measurement of photosynthetic light-response curves for planted Larix olgensis trees

A photosynthetic light-response (PLR) curve is a mathematical description of a single biochemical process and has been widely applied in many eco-physiological models. To date, many PLR measurement designs have been suggested, although their differences have rarely been explored, and the most effective design has not been determined. In this study, we measured three types of PLR curves (High, Middle and Low) from planted Larix olgensis trees by setting 31 photosynthetically active radiation (PAR) gradients. More than 530 million designs with different combinations of PAR gradients from 5 to 30 measured points were conducted to fit each of the three types of PLR curves. The influence of different PLR measurement designs on the goodness of fit of the PLR curves and the accuracy of the estimated photosynthetic indicators were analysed, and the optimal design was determined. The results showed that the measurement designs with fewer PAR gradients generally resulted in worse predicted accuracy for the photosynthetic indicators. However, the accuracy increased and remained stable when more than ten measurement points were used for the PAR gradients. The mean percent error (M%E) of the estimated maximum net photosynthetic rate (Pmax) and dark respiratory rate (Rd) for the designs with less than ten measurement points were, on average, 16.4 times and 20.1 times greater than those for the designs with more than ten measurement points. For a single tree, a unique PLR curve design generally reduced the accuracy of the predicted photosynthetic indicators. Thus, three optimal measurement designs were provided for the three PLR curve types, in which the root mean square error (RMSE) values reduced by an average of 8.3% and the coefficient of determination (R2) values increased by 0.3%. The optimal design for the High PLR curve type should shift more towards high-intensity PAR values, which is in contrast to the optimal design for the Low PLR curve type, which should shift more towards low-intensity PAR values.

Green manuring effects on crop morpho-physiological characters, rice yield and soil properties

A field experiment was carried out to evaluate the effect of green manure and nitrogen fertilizer on morpho-physiological traits, yield and post-harvest nutrient status of the soil during kharif season of 2017. The experiment was laid out with a randomized complete block design with twelve treatments, and was replicated thrice. The treatments were T1 [Control (no green manure + no fertilizer)], T2 (Sesbania aculeata + N0), T3 (Sesbania aculeata + N15), T4 (Sesbania aculeata + N30), T5 (Sesbania aculeata + N45), T6 (Sesbania aculeata + N60), T7 (Crotalaria juncea + N0), T8 (Crotalaria juncea + N15), T9 (Crotalaria juncea + N30), T10 (Crotalaria juncea + N45), T11 (Crotalaria juncea + N60), and T12 (N60). Incorporation of green manure with nitrogen fertilizer generated consistently positive responses in important morpho-physiological traits such as chlorophyll content (SPAD value), leaf area index (LAI), light interception percent (%LI), and net assimilation rate (NAR), which may result in higher grain yield compared to control, and N60 due to greater contribution of yield determining traits. Treatment comprising green manure with N60 produced significantly the higher grain yield even over the N60. The results of this research indicated that balanced nutrients supply increased leaf chlorophyll content, LAI, %LI, NAR, and finally led to higher dry matter production and yield of rice. Incorporation of green manure also had significantly increased the macro- and micronutrient content of post-harvest soil. These results suggest that continuous use of fertilizer might lead to a yield loses of rice, and that situation could be escaped by a combined application of green manure and judicial nitrogen fertilizer management.

Contributions of leaf photosynthetic capacity, leaf angle and self-shading to the maximization of net photosynthesis in Acer saccharum: a modelling assessment

BACKGROUND AND AIMS

Plants are expected to maximize their net photosynthetic gains and efficiently use available resources, but the fundamental principles governing trade-offs in suites of traits related to resource-use optimization remain uncertain. This study investigated whether Acer saccharum (sugar maple) saplings could maximize their net photosynthetic gains through a combination of crown structure and foliar characteristics that let all leaves maximize their photosynthetic light-use efficiency (ε).

METHODS

A functional-structural model, LIGNUM, was used to simulate individuals of different leaf area index (LAI(ind)) together with a genetic algorithm to find distributions of leaf angle (L(A)) and leaf photosynthetic capacity (A(max)) that maximized net carbon gain at the whole-plant level. Saplings grown in either the open or in a forest gap were simulated with A(max) either unconstrained or constrained to an upper value consistent with reported values for A(max) in A. saccharum.

KEY RESULTS

It was found that total net photosynthetic gain was highest when whole-plant PPFD absorption and leaf ε were simultaneously maximized. Maximization of ε required simultaneous adjustments in L(A) and A(max) along gradients of PPFD in the plants. When A(max) was constrained to a maximum, plants growing in the open maximized their PPFD absorption but not ε because PPFD incident on leaves was higher than the PPFD at which ε(max) was attainable. Average leaf ε in constrained plants nonetheless improved with increasing LAI(ind) because of an increase in self-shading.

CONCLUSIONS

It is concluded that there are selective pressures for plants to simultaneously maximize both PPFD absorption at the scale of the whole individual and ε at the scale of leaves, which requires a highly integrated response between L(A), A(max) and LAI(ind). The results also suggest that to maximize ε plants have evolved mechanisms that co-ordinate the L(A) and A(max) of individual leaves with PPFD availability.

Geometrical similarity analysis of photosynthetic light response curves, light saturation and light use efficiency

Light absorption and use efficiency (LAUE mol mol(-1), daily gross photosynthesis per daily incident light) of each leaf depends on several factors, including the degree of light saturation. It is often discussed that upper canopy leaves exposed to direct sunlight are fully light-saturated. However, we found that upper leaves of three temperate species, a heliophytic perennial herb Helianthus tuberosus, a pioneer tree Alnus japonica, and a late-successional tree Fagus crenata, were not fully light-saturated even under full sunlight. Geometrical analysis of the photosynthetic light response curves revealed that all the curves of the leaves from different canopy positions, as well as from the different species, can be considered as different parts of a single non-rectangular hyperbola. The analysis consistently explained how those leaves were not fully light-saturated. Light use optimization models, called big leaf models, predicted that the degree of light saturation and LAUE are both independent of light environment. From these, we hypothesized that the upper leaves should not be fully light-saturated even under direct sunlight, but instead should share the light limitation with the shaded lower-canopy leaves, so as to utilize strong sunlight efficiently. Supporting this prediction, within a canopy of H. tuberosus, both the degree of light saturation and LAUE were independent of light environment within a canopy, resulting in proportionality between the daily photosynthesis and the daily incident light among the leaves.

Optimal photosynthetic use of light by tropical tree crowns achieved by adjustment of individual leaf angles and nitrogen content

BACKGROUND AND AIMS

Theory for optimal allocation of foliar nitrogen (ONA) predicts that both nitrogen concentration and photosynthetic capacity will scale linearly with gradients of insolation within plant canopies. ONA is expected to allow plants to efficiently use both light and nitrogen. However, empirical data generally do not exhibit perfect ONA, and light-use optimization per se is little explored. The aim was to examine to what degree partitioning of nitrogen or light is optimized in the crowns of three tropical canopy tree species.

METHODS

Instantaneous photosynthetic photon flux density (PPFD) incident on the adaxial surface of individual leaves was measured along vertical PPFD gradients in tree canopies at a frequency of 0.5 Hz over 9-17 d, and summed to obtain the average daily integral of PPFD for each leaf to characterize its insolation regime. Also measured were leaf N per area (N(area)), leaf mass per area (LMA), the cosine of leaf inclination and the parameters of the photosynthetic light response curve [photosynthetic capacity (A(max)), dark respiration (R(d)), apparent quantum yield (phi) and curvature (theta)]. The instantaneous PPFD measurements and light response curves were used to estimate leaf daily photosynthesis (A(daily)) for each leaf.

KEY RESULTS

Leaf N(area) and A(max) changed as a hyperbolic asymptotic function of the PPFD regime, not the linear relationship predicted by ONA. Despite this suboptimal nitrogen partitioning among leaves, A(daily) did increase linearly with PPFD regime through co-ordinated adjustments in both leaf angle and physiology along canopy gradients in insolation, exhibiting a strong convergence among the three species.

CONCLUSIONS

The results suggest that canopy tree leaves in this tropical forest optimize photosynthetic use of PPFD rather than N per se. Tropical tree canopies then can be considered simple 'big-leaves' in which all constituent 'small leaves' use PPFD with the same photosynthetic efficiency.

Effects of kaolin application on light absorption and distribution, radiation use efficiency and photosynthesis of almond and walnut canopies

BACKGROUND AND AIMS

Kaolin applied as a suspension to plant canopies forms a film on leaves that increases reflection and reduces absorption of light. Photosynthesis of individual leaves is decreased while the photosynthesis of the whole canopy remains unaffected or even increases. This may result from a better distribution of light within the canopy following kaolin application, but this explanation has not been tested. The objective of this work was to study the effects of kaolin application on light distribution and absorption within tree canopies and, ultimately, on canopy photosynthesis and radiation use efficiency.

METHODS

Photosynthetically active radiation (PAR) incident on individual leaves within the canopy of almond (Prunus dulcis) and walnut (Juglans regia) trees was measured before and after kaolin application in order to study PAR distribution within the canopy. The PAR incident on, and reflected and transmitted by, the canopy was measured on the same day for kaolin-sprayed and control trees in order to calculate canopy PAR absorption. These data were then used to model canopy photosynthesis and radiation use efficiency by a simple method proposed in previous work, based on the photosynthetic response to incident PAR of a top-canopy leaf.

KEY RESULTS

Kaolin increased incident PAR on surfaces of inner-canopy leaves, although there was an estimated 20 % loss in PAR reaching the photosynthetic apparatus, due to increased reflection. Assuming a 20 % loss of PAR, modelled photosynthesis and photosynthetic radiation use efficiency (PRUE) of kaolin-coated leaves decreased by only 6.3 %. This was due to (1) more beneficial PAR distribution within the kaolin-sprayed canopy, and (2) with decreasing PAR, leaf photosynthesis decreases less than proportionally, due to the curvature of the photosynthesis response-curve to PAR. The relatively small loss in canopy PRUE (per unit of incident PAR), coupled with the increased incident PAR on the leaf surface on inner-canopy leaves, resulted in an estimated increase in modelled photosynthesis of the canopy (+9 % in both walnut and almond). The small loss in PRUE (per unit of incident PAR) resulted in an increase in radiation use efficiency per unit of absorbed PAR, which more than compensated for the minor (7 %) reduction in canopy PAR absorption.

CONCLUSIONS

The results explain the apparently contradictory findings in the literature of positive or no effects of kaolin applications on canopy photosynthesis and yield, despite the decrease in photosynthesis by individual leaves when measured at the same PAR.

Toward Synthesis of Relationships among Leaf Longevity, Instantaneous Photosynthetic Rate, Lifetime Leaf Carbon Gain, and the Gross Primary Production of Forests

The assimilation of carbon by plant communities (gross primary production [GPP]) is a central concern in plant ecology as well as for our understanding of global climate change. As an alternative to traditional methods involving destructive harvests or time-consuming measurements, we present a simple, general model for GPP as the product of the lifetime carbon gain by a single leaf, the daily leaf production rate, and the length of the favorable period for photosynthesis. To test the model, we estimated leaf lifetime carbon gain for 26 species using the concept of mean labor time for leaves (the part of each day the leaf functions to full capacity), average potential photosynthetic capacity over the leaf lifetime, and functional leaf longevity (leaf longevity discounted for periods within a year wholly unfavorable for photosynthesis). We found that the lifetime carbon gain of leaves was rather constant across species. Moreover, when foliar biomass was regressed against functional leaf longevity, aseasonal and seasonal forests fell on a single line, suggesting that the leaf production rate during favorable periods is not substantially different among forests in the world. The gross production of forest ecosystems then can be predicted to a first approximation simply by the annual duration of the period favorable for photosynthetic activity in any given region.