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Helleman P, Schrama M, Trimbos KB, Braks MAH, Schaffner F, Stroo A, Wouters RM, van der Beek JG. The ecological niche and population history shape mosquito population genetics on a group of three Caribbean islands. Parasit Vectors 2025; 18:167. [PMID: 40346664 PMCID: PMC12065371 DOI: 10.1186/s13071-025-06801-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2024] [Accepted: 04/14/2025] [Indexed: 05/11/2025] Open
Abstract
BACKGROUND While studies on mosquito population genetics have primarily focused on medically relevant species, fewer have examined the genetic population structure of mosquitoes from a diverse range of species within a single geographical area. The limited comparison between native and non-native species, as well as ecologically divergent species from the same region, hampers our ability to generalise previously described patterns in mosquito population genetics. This study uses the mosquito fauna of the Caribbean islands of Aruba, Curaçao and Bonaire as a case study to explore population genetic variation among both native and non-native mosquito species, as well as among native species occupying different ecological niches. We examine how genetic patterns relate to their population history and species-specific ecologies. METHODS Mitochondrial COII sequences were obtained from 258 mosquito specimens belonging to six species, occurring on all three islands. Sequences were used in haplotype network analysis to assess the genetic variation between mosquito populations of each of the six ecologically diverse species, which vary in both their population history and ecological niche. RESULTS Both the genetic diversity and population genetic structure were found to differ strongly between sets of species, leading to a subdivision into three species groups: (1) non-native species with low genetic diversity across all three investigated islands, (2) locally native species with high genetic diversity and closely related haplotypes occurring on different islands and (3) locally native species with high genetic diversity and locally restricted haplotypes. CONCLUSIONS Our results show that the population genetics of non-native and native species strongly differ, likely as a result of population history. Furthermore, the results suggest that mosquito species sharing the same area may display distinct population genetic structure, likely related to differences in their ecology and dispersal capacity. We suggest that addressing a broader range of species within a single area will benefit future research on mosquito population genetics to place observed patterns into a broader historical, ecological and evolutionary context.
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Affiliation(s)
- Pepijn Helleman
- Institute of Environmental Sciences, Leiden University, 2333 CC, Leiden, The Netherlands
- Biodiversity and Society Research Group, Naturalis Biodiversity Center, 2333 CR, Leiden, The Netherlands
| | - Maarten Schrama
- Institute of Environmental Sciences, Leiden University, 2333 CC, Leiden, The Netherlands
- Biodiversity and Society Research Group, Naturalis Biodiversity Center, 2333 CR, Leiden, The Netherlands
| | - Krijn B Trimbos
- Institute of Environmental Sciences, Leiden University, 2333 CC, Leiden, The Netherlands
| | - Marieta A H Braks
- Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM), 3721 MA, Bilthoven, The Netherlands
| | | | - Arjan Stroo
- Centre for Monitoring of Vectors (CMV), Netherlands Institute for Vectors Invasive Plants and Plant Health (NIVIP), Netherlands Food and Consumer Product Safety Authority (NVWA), 6706 EA, Wageningen, The Netherlands
| | - Roel M Wouters
- Institute of Environmental Sciences, Leiden University, 2333 CC, Leiden, The Netherlands
- Biodiversity and Society Research Group, Naturalis Biodiversity Center, 2333 CR, Leiden, The Netherlands
- Department of Ecology, Faculty of Science, Charles University, 12844, Prague, Czechia
| | - Jordy G van der Beek
- Institute of Environmental Sciences, Leiden University, 2333 CC, Leiden, The Netherlands.
- Biodiversity and Society Research Group, Naturalis Biodiversity Center, 2333 CR, Leiden, The Netherlands.
- Pandemic and Disaster Preparedness Center, Delft, Rotterdam, The Netherlands.
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Kołodziejczyk J, Fijarczyk A, Porth I, Robakowski P, Vella N, Vella A, Kloch A, Biedrzycka A. Genomic investigations of successful invasions: the picture emerging from recent studies. Biol Rev Camb Philos Soc 2025. [PMID: 39956989 DOI: 10.1111/brv.70005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2024] [Revised: 01/30/2025] [Accepted: 01/31/2025] [Indexed: 02/18/2025]
Abstract
Invasion biology aims to identify traits and mechanisms that contribute to successful invasions, while also providing general insights into the mechanisms underlying population expansion and adaptation to rapid climate and habitat changes. Certain phenotypic attributes have been linked to successful invasions, and the role of genetics has been critical in understanding adaptation of invasive species. Nevertheless, a comprehensive summary evaluating the most common evolutionary mechanisms associated with successful invasions across species and environments is still lacking. Here we present a systematic review of studies since 2015 that have applied genomic tools to investigate mechanisms of successful invasions across different organisms. We examine demographic patterns such as changes in genomic diversity at the population level, the presence of genetic bottlenecks and gene flow in the invasive range. We review mechanisms of adaptation such as selection from standing genetic variation and de novo mutations, hybridisation and introgression, all of which can have an impact on invasion success. This comprehensive review of recent articles on the genomic diversity of invasive species led to the creation of a searchable database to provide researchers with an accessible resource. Analysis of this database allowed quantitative assessment of demographic and adaptive mechanisms acting in invasive species. A predominant role of admixture in increasing levels of genetic diversity enabling molecular adaptation in novel habitats is the most important finding of our study. The "genetic paradox" of invasive species was not validated in genomic data across species and ecosystems. Even though the presence of genetic drift and bottlenecks is commonly reported upon invasion, a large reduction in genomic diversity is rarely observed. Any decrease in genetic diversity is often relatively mild and almost always restored via gene flow between different invasive populations. The fact that loci under selection are frequently detected suggests that adaptation to novel habitats on a molecular level is not hindered. The above findings are confirmed herein for the first time in a semi-quantitative manner by molecular data. We also point to gaps and potential improvements in the design of studies of mechanisms driving rapid molecular adaptation in invasive populations. These include the scarcity of comprehensive studies that include sampling from multiple native and invasive populations, identification of invasion sources, longitudinal population sampling, and the integration of fitness measures into genomic analyses. We also note that the potential of whole genome studies is often not exploited fully in predicting invasive potential. Comparative genomic studies identifying genome features promoting invasions are underrepresented despite their potential for use as a tool in invasive species control.
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Affiliation(s)
- Joanna Kołodziejczyk
- Institute of Nature Conservation, Polish Academy of Sciences, Mickiewicza 33, Kraków, 31-120, Poland
| | - Anna Fijarczyk
- Natural Resources Canada, Laurentian Forestry Centre, 1055 Rue du Peps, Québec City, Quebec, G1V 4C7, Canada
- Department of Biology, Laval University, 1045 Avenue de la Médecine, Québec City, Quebec, G1V 0A6, Canada
- Institute of Integrative Biology and Systems, Laval University, 1030 Avenue de La Médecine, Québec City, Quebec, G1V 0A6, Canada
| | - Ilga Porth
- Institute of Integrative Biology and Systems, Laval University, 1030 Avenue de La Médecine, Québec City, Quebec, G1V 0A6, Canada
- Department of Wood and Forest Sciences, Laval University, 1030 Avenue de La Médecine, Québec City, Quebec, G1V 0A6, Canada
- Centre for Forest Research, Laval University, 2405 Rue de La Terrasse, Québec City, Quebec, G1V 0A6, Canada
| | - Piotr Robakowski
- Faculty of Forestry and Wood Technology, Poznań University of Life Sciences, 71E Wojska Polskiego Street, Poznań, PL 60-625, Poland
| | - Noel Vella
- Conservation Biology Research Group, Department of Biology, University of Malta, Msida, MSD2080, Malta
| | - Adriana Vella
- Conservation Biology Research Group, Department of Biology, University of Malta, Msida, MSD2080, Malta
| | - Agnieszka Kloch
- Faculty of Biology, University of Warsaw, Miecznikowa 1, Warsaw, 02-089, Poland
| | - Aleksandra Biedrzycka
- Institute of Nature Conservation, Polish Academy of Sciences, Mickiewicza 33, Kraków, 31-120, Poland
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Muharromah AF, Carvajal TM, Regilme MAF, Watanabe K. Fine-scale adaptive divergence and population genetic structure of Aedes aegypti in Metropolitan Manila, Philippines. Parasit Vectors 2024; 17:233. [PMID: 38769579 PMCID: PMC11107013 DOI: 10.1186/s13071-024-06300-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Accepted: 04/23/2024] [Indexed: 05/22/2024] Open
Abstract
BACKGROUND The adaptive divergence of Aedes aegypti populations to heterogeneous environments can be a driving force behind the recent expansion of their habitat distribution and outbreaks of dengue disease in urbanized areas. In this study, we investigated the population genomics of Ae. aegypti at a regional scale in Metropolitan Manila, Philippines. METHODS We used the Pool-Seq double digestion restriction-site association DNA sequencing (ddRAD-Seq) approach to generate a high number of single nucleotide polymorphisms (SNPs), with the aim to determine local adaptation and compare the population structure with 11 microsatellite markers. A total of 217 Ae. aegypti individuals from seven female and seven male populations collected from Metropolitan Manila were used in the assays. RESULTS We detected 65,473 SNPs across the populations, of which 76 were non-neutral SNPs. Of these non-neutral SNPs, the multivariate regression test associated 50 with eight landscape variables (e.g. open space, forest, etc.) and 29 with five climate variables (e.g. air temperature, humidity, etc.) (P-value range 0.005-0.045) in female and male populations separately. Male and female populations exhibited contrasting spatial divergence, with males exhibiting greater divergence than females, most likely reflecting the different dispersal abilities of male and female mosquitoes. In the comparative analysis of the same Ae. aegypti individuals, the pairwise FST values of 11 microsatellite markers were lower than those of the neutral SNPs, indicating that the neutral SNPs generated via pool ddRAD-Seq were more sensitive in terms of detecting genetic differences between populations at fine-spatial scales. CONCLUSIONS Overall, our study demonstrates the utility of pool ddRAD-Seq for examining genetic differences in Ae. aegypti populations in areas at fine-spatial scales that could inform vector control programs such as Wolbachia-infected mosquito mass-release programs. This in turn would provide information on mosquito population dispersal patterns and the potential barriers to mosquito movement within and around the release area. In addition, the potential of environmental adaptability observed in Ae. aegypti could help population control efforts.
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Affiliation(s)
- Atikah Fitria Muharromah
- Center for Marine Environmental Studies (CMES), Ehime University, Bunkyo-cho 3, Matsuyama, Ehime, 7908577, Japan
- Graduate School of Science and Engineering, Ehime University, Bunkyo-cho 3, Matsuyama, Ehime, 7908577, Japan
- Department of Tropical Biology, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, 55281, Indonesia
| | - Thaddeus M Carvajal
- Center for Marine Environmental Studies (CMES), Ehime University, Bunkyo-cho 3, Matsuyama, Ehime, 7908577, Japan
- Biological Control Research Unit, Center for Natural Sciences and Environmental Research, De La Salle University, 2401 Taft Avenue, 1004, Manila, Philippines
| | - Maria Angenica F Regilme
- Center for Marine Environmental Studies (CMES), Ehime University, Bunkyo-cho 3, Matsuyama, Ehime, 7908577, Japan
| | - Kozo Watanabe
- Center for Marine Environmental Studies (CMES), Ehime University, Bunkyo-cho 3, Matsuyama, Ehime, 7908577, Japan.
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Paksa A, Azizi K, Yousefi S, Dabaghmanesh S, Shahabi S, Sanei-Dehkordi A. First report on the molecular phylogenetics and population genetics of Aedes aegypti in Iran. Parasit Vectors 2024; 17:49. [PMID: 38303048 PMCID: PMC10835860 DOI: 10.1186/s13071-024-06138-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Accepted: 01/12/2024] [Indexed: 02/03/2024] Open
Abstract
BACKGROUND Aedes aegypti, the primary vector of various human arboviral diseases, is a significant public health threat. Aedes aegypti was detected in Iran in 2018, in Hormozgan province, but comprehensive information regarding its genetic diversity and origin within the country remains scarce. This study aimed to determine the origin and genetic diversity of Ae. aegypti in southern Iran. METHODS Aedes aegypti mosquitoes were collected from Bandar Abbas City, Hormozgan Province, southern Iran, between May and July 2022. Specimens were morphologically identified. Origin and assess genetic diversity were assessed based on the mitochondrial DNA-encoded cytochrome c oxidase subunit I (mtDNA-COI) gene. RESULTS BLAST (basic local alignment search tool) analysis confirmed the accuracy of the morphological identification of all specimens as Ae. aegypti, with 100% similarity to GenBank sequences. Calculated variance and haplotype diversity were 0.502 and 0.00157, respectively. Among the 604 examined nucleotide sequences, only a single site was non-synonymous. Total nucleotide diversity and average pairwise nucleotides were determined as 0.00083 and 0.502, respectively. Fu and Li's D test values were not statistically significant. Strobeck's S statistic value was 0.487, and Tajima's D value was 1.53395; both were not statistically significant (P > 0.10). CONCLUSIONS Phylogenetic analysis revealed two distinct clades with minimal nucleotide differences and low haplotype diversity, suggesting the recent establishment of Ae. Aegypti in the southern region of Iran. The phylogenetic analysis also indicated an association between Ae. aegypti populations and mosquitoes from Saudi Arabia and Pakistan.
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Affiliation(s)
- Azim Paksa
- Department of Biology and Control of Disease Vectors, School of Health, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Kourosh Azizi
- Department of Biology and Control of Disease Vectors, School of Health, Shiraz University of Medical Sciences, Shiraz, Iran
| | | | - Sorna Dabaghmanesh
- Department of Biology and Control of Disease Vectors, School of Health, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Saeed Shahabi
- Department of Biology and Control of Disease Vectors, School of Health, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Alireza Sanei-Dehkordi
- Infectious and Tropical Diseases Research Center, Hormozgan Health Institute, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
- Department of Biology and Control of Disease Vectors, Faculty of Health, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
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Muharromah AF, Reyes JIL, Kagia N, Watanabe K. Genome-wide detection of Wolbachia in natural Aedes aegypti populations using ddRAD-Seq. Front Cell Infect Microbiol 2023; 13:1252656. [PMID: 38162582 PMCID: PMC10755911 DOI: 10.3389/fcimb.2023.1252656] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Accepted: 11/20/2023] [Indexed: 01/03/2024] Open
Abstract
Background Wolbachia, an endosymbiotic bacterium, is globally used to control arboviruses because of its ability to block arboviral replication and manipulate the reproduction of Wolbachia host, Aedes aegypti. Polymerase chain reaction (PCR)-based Wolbachia detection has been recently reported from natural Ae. aegypti populations. However, due to the technical limitations of PCR, such as primer incompatibility, PCR-based assays are not sufficiently reliable or accurate. In this study, we examined double digestion restriction site-associated DNA sequencing (ddRAD-Seq) efficiency and limitations in Wolbachia detection and quantification in field-collected Ae. aegypti natural populations in Metro Manila, the Philippines, compared with PCR-based assays. Methods A total of 217 individuals Ae. aegypti were collected from Metropolitan Manila, Philippines. We separated it into 14 populations consisting of 7 female and male populations. We constructed a library for pool ddRAD-Seq per population and also screened for Wolbachia by PCR assays using wsp and 16S rRNA. Wolbachia density per population were measured using RPS17 as the housekeeping gene. Results From 146,239,637 sequence reads obtained, 26,299 and 43,778 reads were mapped across the entire Wolbachia genome (with the wAlbA and wAlbB strains, respectively), suggesting that ddRAD-Seq complements PCR assays and supports more reliable Wolbachia detection from a genome-wide perspective. The number of reads mapped to the Wolbachia genome per population positively correlated with the number of Wolbachia-infected individuals per population based on PCR assays and the relative density of Wolbachia in the Ae. aegypti populations based on qPCR, suggesting ddRAD-Seq-based semi-quantification of Wolbachia by ddRAD-Seq. Male Ae. aegypti exhibited more reads mapped to the Wolbachia genome than females, suggesting higher Wolbachia prevalence rates in their case. We detected 150 single nucleotide polymorphism loci across the Wolbachia genome, allowing for more accurate the detection of four strains: wPip, wRi, TRS of Brugia malayi, and wMel. Conclusions Taken together, our results demonstrate the feasibility of ddRAD-Seq-based Wolbachia detection from field-collected Ae. aegypti mosquitoes.
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Affiliation(s)
- Atikah Fitria Muharromah
- Molecular Ecology and Health Laboratory, Center for Marine Environmental Studies (CMES), Ehime University, Matsuyama, Japan
- Entomology Laboratory, Department of Tropical Biology, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, Indonesia
| | - Jerica Isabel L. Reyes
- Molecular Ecology and Health Laboratory, Center for Marine Environmental Studies (CMES), Ehime University, Matsuyama, Japan
| | - Ngure Kagia
- Molecular Ecology and Health Laboratory, Center for Marine Environmental Studies (CMES), Ehime University, Matsuyama, Japan
| | - Kozo Watanabe
- Molecular Ecology and Health Laboratory, Center for Marine Environmental Studies (CMES), Ehime University, Matsuyama, Japan
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Liu K, Tseng S, Tatsuta H, Tsuji K, Tay J, Singham GV, Yang CS, Neoh K. Population genetic structure of the globally introduced big-headed ant in Taiwan. Ecol Evol 2022; 12:e9660. [PMID: 36582779 PMCID: PMC9789323 DOI: 10.1002/ece3.9660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Revised: 12/01/2022] [Accepted: 12/05/2022] [Indexed: 12/25/2022] Open
Abstract
Global commerce and transportation facilitate the spread of invasive species. The African big-headed ant, Pheidole megacephala (Fabricius), has achieved worldwide distribution through globalization. Since the late 19th century, Taiwan has served as a major seaport because of its strategic location. The population genetic structure of P. megacephala in Taiwan is likely to be shaped by international trade and migration between neighboring islands. In this study, we investigated the population genetics of P. megacephala colonies sampled from four geographical regions in Taiwan and elucidated the population genetic structures of P. megacephala sampled from Taiwan, Okinawa, and Hawaii. We observed a low genetic diversity of P. megacephala across regions in Taiwan. Moreover, we noted low regional genetic differentiation and did not observe isolation by distance, implying that long-distance jump dispersal might have played a crucial role in the spread of P. megacephala. We sequenced the partial cytochrome oxidase I gene and observed three mitochondrial haplotypes (TW1-TW3). TW1 and TW3 most likely originated from populations within the species' known invasive range, suggesting that secondary introduction is the predominant mode of introduction for this invasive ant. TW2 represents a novel haplotype that was previously unreported in other regions. P. megacephala populations from Taiwan, Okinawa, and Hawaii exhibited remarkable genetic similarity, which may reflect their relative geographic proximity and the historical connectedness of the Asia-Pacific region.
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Affiliation(s)
- Kuan‐Ling Liu
- Department of EntomologyNational Chung Hsing UniversityTaichungTaiwan
| | - Shu‐Ping Tseng
- Department of EntomologyNational Taiwan UniversityTaipeiTaiwan
| | - Haruki Tatsuta
- Graduate School of Systems Life SciencesKyushu UniversityFukuokaJapan
| | - Kazuki Tsuji
- Department of Subtropical Agro‐Environmental SciencesUniversity of the RyukyusOkinawaJapan
| | - Jia‐Wei Tay
- Department of Plant and Environmental Protection SciencesUniversity of Hawaii at ManoaHonoluluHawaiiUSA
| | - G. Veera Singham
- Centre for Chemical BiologyUniversiti Sains MalaysiaPenangMalaysia
| | - Chin‐Cheng Scotty Yang
- Department of EntomologyVirginia Polytechnic Institute and State UniversityBlacksburgVirginiaUSA
| | - Kok‐Boon Neoh
- Department of EntomologyNational Chung Hsing UniversityTaichungTaiwan
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Escobar D, Ortiz B, Urrutia O, Fontecha G. Genetic Diversity among Four Populations of Aedes aegypti (Diptera: Culicidae) from Honduras as Revealed by Mitochondrial DNA Cytochrome Oxidase I. Pathogens 2022; 11:pathogens11060620. [PMID: 35745474 PMCID: PMC9228569 DOI: 10.3390/pathogens11060620] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 05/23/2022] [Accepted: 05/24/2022] [Indexed: 02/05/2023] Open
Abstract
Aedes aegypti is a hematophagous and highly anthropophilic mosquito with a wide distribution, particularly in tropical and subtropical regions of the world. Ae. aegypti is the main vector of several febrile diseases called arboviruses (dengue, yellow fever, chikungunya, and zika viruses), which represent an important public health problem. Populations of this mosquito were nearly eliminated from the Americas in the mid-20th century; however, after the abandonment of control measures, mosquito populations have been recovering territory, have expanded by anthropogenic mechanisms, and have been joined by new populations reintroduced from other continents. The objective of this pilot study was to determine the genetic variability of Aedes aegypti collected in four cities located along the so-called logistics corridor of Honduras, which connects the Caribbean Sea to the Pacific Ocean. We studied the sequences of two molecular markers: the cytochrome c oxidase 1 (COI mtDNA) gene and the internal transcribed spacer 2 (ITS2 rDNA) of 40 mosquitoes. Phylogenetic analyzes show two separate clades with a low number of nucleotide differences per site, three haplotypes, and low haplotype diversity. These results suggest a low genetic diversity in the populations of Ae. aegypti in Honduras in relation to that reported in other countries of the Central American isthmus.
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Affiliation(s)
- Denis Escobar
- Microbiology Research Institute, Universidad Nacional Autónoma de Honduras, Tegucigalpa 11101, Honduras; (D.E.); (B.O.)
| | - Bryan Ortiz
- Microbiology Research Institute, Universidad Nacional Autónoma de Honduras, Tegucigalpa 11101, Honduras; (D.E.); (B.O.)
| | - Oscar Urrutia
- Unidad de vigilancia de la salud, Secretaría de Salud de Honduras, Tegucigalpa 11101, Honduras;
| | - Gustavo Fontecha
- Microbiology Research Institute, Universidad Nacional Autónoma de Honduras, Tegucigalpa 11101, Honduras; (D.E.); (B.O.)
- Correspondence: ; Tel.: +504-33935443
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Pless E, Powell JR, Seger KR, Ellis B, Gloria‐Soria A. Evidence for serial founder events during the colonization of North America by the yellow fever mosquito, Aedes aegypti. Ecol Evol 2022; 12:e8896. [PMID: 35592063 PMCID: PMC9102526 DOI: 10.1002/ece3.8896] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Accepted: 04/05/2022] [Indexed: 11/09/2022] Open
Abstract
The Aedes aegypti mosquito first invaded the Americas about 500 years ago and today is a widely distributed invasive species and the primary vector for viruses causing dengue, chikungunya, Zika, and yellow fever. Here, we test the hypothesis that the North American colonization by Ae. aegypti occurred via a series of founder events. We present findings on genetic diversity, structure, and demographic history using data from 70 Ae. aegypti populations in North America that were genotyped at 12 microsatellite loci and/or ~20,000 single nucleotide polymorphisms, the largest genetic study of the region to date. We find evidence consistent with colonization driven by serial founder effect (SFE), with Florida as the putative source for a series of westward invasions. This scenario was supported by (1) a decrease in the genetic diversity of Ae. aegypti populations moving west, (2) a correlation between pairwise genetic and geographic distances, and (3) demographic analysis based on allele frequencies. A few Ae. aegypti populations on the west coast do not follow the general trend, likely due to a recent and distinct invasion history. We argue that SFE provides a helpful albeit simplified model for the movement of Ae. aegypti across North America, with outlier populations warranting further investigation.
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Affiliation(s)
- Evlyn Pless
- Department of Ecology and Evolutionary BiologyYale UniversityNew HavenConnecticutUSA
- Department of AnthropologyUniversity of CaliforniaDavisCaliforniaUSA
| | - Jeffrey R. Powell
- Department of Ecology and Evolutionary BiologyYale UniversityNew HavenConnecticutUSA
| | | | - Brett Ellis
- U.S. Virgin Islands Department of HealthChristianstedVIUSA
| | - Andrea Gloria‐Soria
- Department of Ecology and Evolutionary BiologyYale UniversityNew HavenConnecticutUSA
- Department of Environmental SciencesThe Connecticut Agricultural Experiment StationNew HavenConnecticutUSA
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Sherpa S, Després L. The evolutionary dynamics of biological invasions: A multi-approach perspective. Evol Appl 2021; 14:1463-1484. [PMID: 34178098 PMCID: PMC8210789 DOI: 10.1111/eva.13215] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2020] [Revised: 02/22/2021] [Accepted: 03/02/2021] [Indexed: 01/02/2023] Open
Abstract
Biological invasions, the establishment and spread of non-native species in new regions, can have extensive economic and environmental consequences. Increased global connectivity accelerates introduction rates, while climate and land-cover changes may decrease the barriers to invasive populations spread. A detailed knowledge of the invasion history, including assessing source populations, routes of spread, number of independent introductions, and the effects of genetic bottlenecks and admixture on the establishment success, adaptive potential, and further spread, is crucial from an applied perspective to mitigate socioeconomic impacts of invasive species, as well as for addressing fundamental questions on the evolutionary dynamics of the invasion process. Recent advances in genomics together with the development of geographic information systems provide unprecedented large genetic and environmental datasets at global and local scales to link population genomics, landscape ecology, and species distribution modeling into a common framework to study the invasion process. Although the factors underlying population invasiveness have been extensively reviewed, analytical methods currently available to optimally combine molecular and environmental data for inferring invasive population demographic parameters and predicting further spreading are still under development. In this review, we focus on the few recent insect invasion studies that combine different datasets and approaches to show how integrating genetic, observational, ecological, and environmental data pave the way to a more integrative biological invasion science. We provide guidelines to study the evolutionary dynamics of invasions at each step of the invasion process, and conclude on the benefits of including all types of information and up-to-date analytical tools from different research areas into a single framework.
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Affiliation(s)
- Stéphanie Sherpa
- CNRSLECAUniversité Grenoble AlpesUniversité Savoie Mont BlancGrenobleFrance
| | - Laurence Després
- CNRSLECAUniversité Grenoble AlpesUniversité Savoie Mont BlancGrenobleFrance
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10
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Improving mosquito control strategies with population genomics. Trends Parasitol 2021; 37:907-921. [PMID: 34074606 DOI: 10.1016/j.pt.2021.05.002] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Revised: 05/06/2021] [Accepted: 05/06/2021] [Indexed: 01/01/2023]
Abstract
Mosquito control strategies increasingly apply knowledge from population genomics research. This review highlights recent applications to three research domains: mosquito invasions, insecticide resistance evolution, and rear and release programs. Current research trends follow developments in reference assemblies, either as improvements to existing assemblies (particularly Aedes) or assemblies for new taxa (particularly Anopheles). With improved assemblies, studies of invasive and rear and release target populations are better able to incorporate adaptive as well as demographic hypotheses. New reference assemblies are aiding comparisons of insecticide resistance across sister taxa while helping resolve taxon boundaries amidst frequent introgression. Anopheles gene drive deployments and improved Aedes genome assemblies should lead to a convergence in research aims for Anopheles and Aedes in the coming years.
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Bennett KL, McMillan WO, Loaiza JR. The genomic signal of local environmental adaptation in Aedes aegypti mosquitoes. Evol Appl 2021; 14:1301-1313. [PMID: 34025769 PMCID: PMC8127705 DOI: 10.1111/eva.13199] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 12/22/2020] [Accepted: 01/21/2021] [Indexed: 12/19/2022] Open
Abstract
Local adaptation is important when predicting arthropod-borne disease risk because of its impacts on vector population fitness and persistence. However, the extent that vector populations are adapted to the environment generally remains unknown. Despite low population structure and high gene flow in Aedes aegypti mosquitoes across Panama, excepting the province of Bocas del Toro, we identified 128 candidate SNPs, clustered within 17 genes, which show a strong genomic signal of local environmental adaptation. This putatively adaptive variation occurred across fine geographical scales with the composition and frequency of candidate adaptive loci differing between populations in wet tropical environments along the Caribbean coast and dry tropical conditions typical of the Pacific coast. Temperature and vegetation were important predictors of adaptive genomic variation in Ae. aegypti with several potential areas of local adaptation identified. Our study lays the foundations of future work to understand whether environmental adaptation in Ae. aegypti impacts the arboviral disease landscape and whether this could either aid or hinder efforts of population control.
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Affiliation(s)
- Kelly L. Bennett
- Smithsonian Tropical Research InstituteBalboa AnconRepublic of Panama
| | - W. Owen McMillan
- Smithsonian Tropical Research InstituteBalboa AnconRepublic of Panama
| | - Jose R. Loaiza
- Smithsonian Tropical Research InstituteBalboa AnconRepublic of Panama
- Instituto de Investigaciones Científicas y Servicios de Alta TecnologíaPanamáRepublic of Panama
- Programa Centroamericano de Maestría en EntomologíaUniversidad de PanamáPanamáRepublic of Panama
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Ponce P, Muñoz-Tobar S, Carrazco-Montalvo A, Villota SD, Coloma J, Wang C, Holechek S, Cevallos V. Two Haplotypes of Aedes aegypti Detected by ND4 Mitochondrial Marker in Three Regions of Ecuador. INSECTS 2021; 12:insects12030200. [PMID: 33673456 PMCID: PMC7996963 DOI: 10.3390/insects12030200] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Revised: 02/18/2021] [Accepted: 02/22/2021] [Indexed: 12/03/2022]
Abstract
Simple Summary The yellow fever mosquito, Aedes aegypti, is a widespread species associated with the transmission of vector-borne diseases across tropical and subtropical areas of the world. The genetic variability of its populations has been assessed with the use of several molecular markers to understand aspects of the population dynamics and their implication in disease transmission. However, the genetic diversity of Ecuadorian populations of the vector have not been investigated. In this study, we evaluated the genetic diversity of Ecuadorian populations of Ae. aegypti from 17 sites (Galapagos Islands, Amazon basin, and Coastal regions). These analyses revealed the presence of only two haplotypes among the Ecuadorian population of the vector. Haplotype 1, appears to be related to previously reported haplotypes from America, Asia, and West Africa. While haplotype 2 is only related to samples from America. The genetic diversity of Ecuadorian populations seems to be low, according to different statistical analyses, which show only one main population across sampled localities and no effect of the main geographical barriers. Understanding the genetic diversity of local populations is a key element in vector control strategies. Abstract Aedes aegypti, also known as the yellow fever mosquito, is the main vector of several arboviruses. In Ecuador, dengue and chikungunya are the most prevalent mosquito-borne diseases. Hence, there is a need to understand the population dynamics and genetic structure of the vector in tropical areas for a better approach towards effective vector control programs. This study aimed to assess the genetic diversity of Ae. aegypti, through the analyses of the mitochondrial gene ND4, using a combination of phylogenetic and population genetic structure from 17 sites in Ecuador. Results showed two haplotypes in the Ecuadorian populations of Ae. aegypti. Haplotype 1 was closely related to Ae. aegypti reported from America, Asia, and West Africa. Haplotype 2 was only related to samples from America. The sampled vectors from the diverse localities showed low nucleotide diversity (π = 0–0.01685) and genetic differentiation (FST = 0.152). AMOVA analyses indicated that most of the variation (85–91%) occurred within populations, suggesting that geographical barriers have little effect on the genetic structure of Ecuadorian populations of Ae. aegypti. These results agree with the one main population (K = 1) detected by Structure. Vector genetic identity may be a key factor in the planning of vector control strategies.
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Affiliation(s)
- Patricio Ponce
- Instituto Nacional de Investigación en Salud Pública, Gestión de Investigación, Desarrollo e Innovación, Quito 170136, Ecuador; (P.P.); (S.M.-T.); (A.C.-M.); (S.D.V.)
- Simon A. Levin Mathematical, Computational and Modeling Sciences Center, Arizona State University, Tempe, AZ 85281, USA;
| | - Sofía Muñoz-Tobar
- Instituto Nacional de Investigación en Salud Pública, Gestión de Investigación, Desarrollo e Innovación, Quito 170136, Ecuador; (P.P.); (S.M.-T.); (A.C.-M.); (S.D.V.)
| | - Andrés Carrazco-Montalvo
- Instituto Nacional de Investigación en Salud Pública, Gestión de Investigación, Desarrollo e Innovación, Quito 170136, Ecuador; (P.P.); (S.M.-T.); (A.C.-M.); (S.D.V.)
| | - Stephany D. Villota
- Instituto Nacional de Investigación en Salud Pública, Gestión de Investigación, Desarrollo e Innovación, Quito 170136, Ecuador; (P.P.); (S.M.-T.); (A.C.-M.); (S.D.V.)
| | - Josefina Coloma
- Division of Infectious Diseases and Vaccinology, School of Public Health, University of California Berkeley, Berkeley, CA 94720, USA; (J.C.); (C.W.)
| | - Chunling Wang
- Division of Infectious Diseases and Vaccinology, School of Public Health, University of California Berkeley, Berkeley, CA 94720, USA; (J.C.); (C.W.)
| | - Susan Holechek
- Simon A. Levin Mathematical, Computational and Modeling Sciences Center, Arizona State University, Tempe, AZ 85281, USA;
- School of Life Sciences, Arizona State University, Tempe, AZ 85281, USA
| | - Varsovia Cevallos
- Instituto Nacional de Investigación en Salud Pública, Gestión de Investigación, Desarrollo e Innovación, Quito 170136, Ecuador; (P.P.); (S.M.-T.); (A.C.-M.); (S.D.V.)
- Simon A. Levin Mathematical, Computational and Modeling Sciences Center, Arizona State University, Tempe, AZ 85281, USA;
- Correspondence:
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13
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Double-digest RAD-sequencing: do pre- and post-sequencing protocol parameters impact biological results? Mol Genet Genomics 2021; 296:457-471. [PMID: 33469716 DOI: 10.1007/s00438-020-01756-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Accepted: 12/14/2020] [Indexed: 02/06/2023]
Abstract
Next-generation sequencing technologies have opened a new era of research in population genetics. Following these new sequencing opportunities, the use of restriction enzyme-based genotyping techniques, such as restriction site-associated DNA sequencing (RAD-seq) or double-digest RAD-sequencing (ddRAD-seq), has dramatically increased in the last decade. From DNA sampling to SNP calling, the laboratory and bioinformatic parameters of enzyme-based techniques have been investigated in the literature. However, the impact of those parameters on downstream analyses and biological results remains less documented. In this study, we investigated the effects of sevral pre- and post-sequencing settings on ddRAD-seq results for two biological systems: a complex of butterfly species (Coenonympha sp.) and several populations of common beech (Fagus sylvatica). Our results suggest that pre-sequencing parameters (i.e., DNA quantity, number of PCR cycles during library preparation) have a significant impact on the number of recovered reads and SNPs, on the number of unique alleles and on individual heterozygosity. In the same way, we found that post-sequencing settings (i.e., clustering and minimum coverage thresholds) influenced loci reconstruction (e.g., number of loci, mean coverage) and SNP calling (e.g., number of SNPs; heterozygosity) but had only a marginal impact on downstream analyses (e.g., measure of genetic differentiation, estimation of individual admixture, and demographic inferences). In addition, replication analyses confirmed the reproducibility of the ddRAD-seq procedure. Overall, this study assesses the degree of sensitivity of ddRAD-seq data to pre- and post-sequencing protocols, and illustrates its robustness when studying population genetics.
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14
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González‐Serna MJ, Cordero PJ, Ortego J. Insights into the neutral and adaptive processes shaping the spatial distribution of genomic variation in the economically important Moroccan locust ( Dociostaurus maroccanus). Ecol Evol 2020; 10:3991-4008. [PMID: 32489626 PMCID: PMC7244894 DOI: 10.1002/ece3.6165] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Revised: 02/12/2020] [Accepted: 02/18/2020] [Indexed: 11/11/2022] Open
Abstract
Understanding the processes that shape neutral and adaptive genomic variation is a fundamental step to determine the demographic and evolutionary dynamics of pest species. Here, we use genomic data obtained via restriction site-associated DNA sequencing to investigate the genetic structure of Moroccan locust (Dociostaurus maroccanus) populations from the westernmost portion of the species distribution (Iberian Peninsula and Canary Islands), infer demographic trends, and determine the role of neutral versus selective processes in shaping spatial patterns of genomic variation in this pest species of great economic importance. Our analyses showed that Iberian populations are characterized by high gene flow, whereas the highly isolated Canarian populations have experienced strong genetic drift and loss of genetic diversity. Historical demographic reconstructions revealed that all populations have passed through a substantial genetic bottleneck around the last glacial maximum (~21 ka BP) followed by a sharp demographic expansion at the onset of the Holocene, indicating increased effective population sizes during warm periods as expected from the thermophilic nature of the species. Genome scans and environmental association analyses identified several loci putatively under selection, suggesting that local adaptation processes in certain populations might not be impeded by widespread gene flow. Finally, all analyses showed few differences between outbreak and nonoutbreak populations. Integrated pest management practices should consider high population connectivity and the potential importance of local adaptation processes on population persistence.
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Affiliation(s)
- María José González‐Serna
- Grupo de Investigación de la Biodiversidad Genética y CulturalInstituto de Investigación en Recursos Cinegéticos – IREC – (CSIC, UCLM, JCCM)Ciudad RealSpain
| | - Pedro J. Cordero
- Grupo de Investigación de la Biodiversidad Genética y CulturalInstituto de Investigación en Recursos Cinegéticos – IREC – (CSIC, UCLM, JCCM)Ciudad RealSpain
- Departamento de Ciencia y Tecnología Agroforestal y GenéticaEscuela Técnica Superior de Ingenieros Agrónomos (ETSIA)Universidad de Castilla‐La Mancha (UCLM)Ciudad RealSpain
| | - Joaquín Ortego
- Department of Integrative EcologyEstación Biológica de Doñana – EBD – (CSIC)SevilleSpain
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Endersby-Harshman NM, Schmidt TL, Chung J, van Rooyen A, Weeks AR, Hoffmann AA. Heterogeneous genetic invasions of three insecticide resistance mutations in Indo-Pacific populations of Aedes aegypti (L.). Mol Ecol 2020; 29:1628-1641. [PMID: 32246542 DOI: 10.1111/mec.15430] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 03/02/2020] [Accepted: 03/17/2020] [Indexed: 12/30/2022]
Abstract
Nations throughout the Indo-Pacific region use pyrethroid insecticides to control Aedes aegypti, the mosquito vector of dengue, often without knowledge of pyrethroid resistance status of the pest or origin of resistance. Two mutations (V1016G + F1534C) in the sodium channel gene (Vssc) of Ae. aegypti modify ion channel function and cause target-site resistance to pyrethroid insecticides, with a third mutation (S989P) having a potential additive effect. Of 27 possible genotypes involving these mutations, some allelic combinations are never seen whereas others predominate. Here, five allelic combinations common in Ae. aegypti from the Indo-Pacific region are described and their geographical distributions investigated using genome-wide SNP markers. We tested the hypothesis that resistance allele combinations evolved de novo in populations versus the alternative that dispersal of Ae. aegypti between populations facilitated genetic invasions of allele combinations. We used latent factor mixed-models to detect SNPs throughout the genome that showed structuring in line with resistance allele combinations and compared variation at SNPs within the Vssc gene with genome-wide variation. Mixed-models detected an array of SNPs linked to resistance allele combinations, all located within or in close proximity to the Vssc gene. Variation at SNPs within the Vssc gene was structured by resistance profile, whereas genome-wide SNPs were structured by population. These results demonstrate that alleles near to resistance mutations have been transferred between populations via linked selection. This indicates that genetic invasions have contributed to the widespread occurrence of Vssc allele combinations in Ae. aegypti in the Indo-Pacific region, pointing to undocumented mosquito invasions between countries.
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Affiliation(s)
- Nancy M Endersby-Harshman
- Pest and Environmental Adaptation Research Group, School of BioSciences, Bio21 Institute, The University of Melbourne, Parkville, Vic., Australia
| | - Thomas L Schmidt
- Pest and Environmental Adaptation Research Group, School of BioSciences, Bio21 Institute, The University of Melbourne, Parkville, Vic., Australia
| | - Jessica Chung
- Pest and Environmental Adaptation Research Group, School of BioSciences, Bio21 Institute, The University of Melbourne, Parkville, Vic., Australia
- Melbourne Bioinformatics, The University of Melbourne, Parkville, Vic., Australia
| | | | - Andrew R Weeks
- Pest and Environmental Adaptation Research Group, School of BioSciences, Bio21 Institute, The University of Melbourne, Parkville, Vic., Australia
- Cesar Pty Ltd, Parkville, Vic., Australia
| | - Ary A Hoffmann
- Pest and Environmental Adaptation Research Group, School of BioSciences, Bio21 Institute, The University of Melbourne, Parkville, Vic., Australia
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16
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Brady OJ, Hay SI. The Global Expansion of Dengue: How Aedes aegypti Mosquitoes Enabled the First Pandemic Arbovirus. ANNUAL REVIEW OF ENTOMOLOGY 2020; 65:191-208. [PMID: 31594415 DOI: 10.1146/annurev-ento-011019-024918] [Citation(s) in RCA: 180] [Impact Index Per Article: 36.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Dengue is an emerging viral disease principally transmitted by the Aedes (Stegomyia) aegypti mosquito. It is one of the fastest-growing global infectious diseases, with 100-400 million new infections a year, and is now entrenched in a growing number of tropical megacities. Behind this rapid rise is the simple adaptation of Ae. aegypti to a new entomological niche carved out by human habitation. This review describes the expansion of dengue and explores how key changes in the ecology of Ae. aegypti allowed it to become a successful invasive species and highly efficient disease vector. We argue that characterizing geographic heterogeneity in mosquito bionomics will be a key research priority that will enable us to better understand future dengue risk and design control strategies to reverse its global spread.
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Affiliation(s)
- Oliver J Brady
- Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London WC1E 7HT, United Kingdom;
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London WC1E 7HT, United Kingdom
| | - Simon I Hay
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, Washington 98121, USA;
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17
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Salgueiro P, Restrepo-Zabaleta J, Costa M, Galardo AKR, Pinto J, Gaborit P, Guidez A, Martins AJ, Dusfour I. Liaisons dangereuses: cross-border gene flow and dispersal of insecticide resistance-associated genes in the mosquito Aedes aegypti from Brazil and French Guiana. Mem Inst Oswaldo Cruz 2019; 114:e190120. [PMID: 31553370 PMCID: PMC6759281 DOI: 10.1590/0074-02760190120] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2019] [Accepted: 08/28/2019] [Indexed: 01/06/2023] Open
Abstract
BACKGROUND In recent years, South America has suffered the burden of continuous high
impact outbreaks of dengue, chikungunya and Zika. Aedes
aegypti is the main mosquito vector of these arboviruses and
its control is the only solution to reduce transmission. OBJECTIVES In order to improve vector control it is essential to study mosquito
population genetics in order to better estimate the population structures
and the geneflow among them. METHODS We have analysed microsatellites and knockdown resistance
(kdr) mutations from a trans-border region in Amazonia
between the state of Amapá (Brazil) and French Guiana (overseas territory of
France), to provide further knowledge on these issues. These two countries
have followed distinct vector control policies since last century. For
population genetic analyses we evaluated variability in 13 well-established
microsatellites loci in Ae. aegypti from French Guiana
(Saint Georges and Cayenne) and Brazil (Oiapoque and Macapá). The occurrence
and frequency of kdr mutations in these same populations
were accessed by TaqMan genotype assays for the sites 1016 (Val/Ile) and
1534 (Phe/Cys). FINDINGS We have detected high levels of gene flow between the closest cross-border
samples of Saint-Georges and Oiapoque. These results suggest one common
origin of re-colonisation for the populations of French Guiana and Oiapoque
in Brazil, and a different source for Macapá, more similar to the other
northern Brazilian populations. Genotyping of the kdr
mutations revealed distinct patterns for Cayenne and Macapá associated with
their different insecticide use history, and an admixture zone between these
two patterns in Saint Georges and Oiapoque, in accordance with population
genetic results. MAIN CONCLUSIONS The present study highlights the need for regional-local vector surveillance
and transnational collaboration between neighboring countries to assess the
impact of implemented vector control strategies, promote timely actions and
develop preparedness plans.
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Affiliation(s)
- Patrícia Salgueiro
- Universidade Nova de Lisboa, Global Health and Tropical Medicine Centre, Instituto de Higiene e Medicina Tropical, Lisboa, Portugal
| | - Johana Restrepo-Zabaleta
- Institut Pasteur de la Guyane, Vectopole Amazonien Emile Abonnenc, Vector Control and Adaptation Unit, Cayenne, France
| | - Monique Costa
- Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Fisiologia e Controle de Artrópodes Vetores, Rio de Janeiro, Brasil
| | | | - João Pinto
- Universidade Nova de Lisboa, Global Health and Tropical Medicine Centre, Instituto de Higiene e Medicina Tropical, Lisboa, Portugal
| | - Pascal Gaborit
- Institut Pasteur de la Guyane, Vectopole Amazonien Emile Abonnenc, Vector Control and Adaptation Unit, Cayenne, France
| | - Amandine Guidez
- Institut Pasteur de la Guyane, Vectopole Amazonien Emile Abonnenc, Vector Control and Adaptation Unit, Cayenne, France
| | - Ademir Jesus Martins
- Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Fisiologia e Controle de Artrópodes Vetores, Rio de Janeiro, Brasil
| | - Isabelle Dusfour
- Institut Pasteur de la Guyane, Vectopole Amazonien Emile Abonnenc, Vector Control and Adaptation Unit, Cayenne, France.,Institut National de la Recherche Scientifique, Centre Armand Frappier Santé Biotechnologie, Laval, QC, Canada
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18
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Huang JP. Holocene Population Decline and Conservation Implication for the Western Hercules Beetle, Dynastes grantii (Coleoptera, Scarabaeidae). J Hered 2019; 110:629-637. [DOI: 10.1093/jhered/esz036] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2019] [Accepted: 05/25/2019] [Indexed: 12/17/2022] Open
Abstract
Abstract
The Western Hercules beetle (Dynastes grantii) is endemic to the highland forest habitats of southwestern United States and northern Mexico. The habitats harbor many endemic species, but are being threatened by rapid climate change and urban development. In this study, the genetic structure of D. grantii populations from southwestern United States was investigated. Specifically, genomic data from double-digest restriction-site-associated DNA sequencing libraries were utilized to test whether geographically distant populations from the Mogollon Rim (Arizona [N = 12 individuals] and New Mexico [N = 10 individuals]) are genetically structured. The study also estimated the effective population size of the Mogollon Rim populations based on genetic diversity. The results indicated that the 2 geographic populations from the Mogollon Rim were not genetically structured. A population size reduction was detected since the end of the last glacial period, which coincided with a reduction of forest habitat in the study area. The results implied that the connectivity and the size of highland forest habitats in the Mogollon Rim could have been the major factors shaping the population genetic structure and demographic history of D. grantii. The Western Hercules beetle could be a useful flagship species for local natural history education and to promote the conservation of highland forest habitats.
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Affiliation(s)
- Jen-Pan Huang
- Biodiversity Research Center, Academia Sinica, Nankang, Taipei, Taiwan
- Integrative Research Center, The Field Museum of Natural History, Chicago, IL
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Origin and expansion of the mosquito Aedes aegypti in Madeira Island (Portugal). Sci Rep 2019; 9:2241. [PMID: 30783149 PMCID: PMC6381185 DOI: 10.1038/s41598-018-38373-x] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2018] [Accepted: 12/11/2018] [Indexed: 11/08/2022] Open
Abstract
Historically known as the yellow fever mosquito, Aedes aegypti invaded Madeira Island in 2005 and was the vector of the island’s first dengue outbreak in 2012. We have studied genetic variation at 16 microsatellites and two mitochondrial DNA genes in temporal samples of Madeira Island, in order to assess the origin of the invasion and the population structure of this mosquito vector. Our results indicated at least two independent colonization events occurred on the island, both having a South American source population. In both scenarios, Venezuela was the most probable origin of these introductions, a result that is in accordance with the socioeconomic relations between this country and Madeira Island. Once introduced, Ae. aegypti has rapidly expanded along the southern coast of the island and reached a maximum effective population size (Ne) in 2012, coincident with the dengue epidemic. After the outbreak, there was a 10-fold reduction in Ne estimates, possibly reflecting the impact of community-based vector control measures implemented during the outbreak. These findings have implications for mosquito surveillance not only for Madeira Island, but also for other European regions where Aedes mosquitoes are expanding.
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Mavian C, Dulcey M, Munoz O, Salemi M, Vittor AY, Capua I. Islands as Hotspots for Emerging Mosquito-Borne Viruses: A One-Health Perspective. Viruses 2018; 11:E11. [PMID: 30585228 PMCID: PMC6356932 DOI: 10.3390/v11010011] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2018] [Revised: 12/18/2018] [Accepted: 12/18/2018] [Indexed: 02/08/2023] Open
Abstract
During the past ten years, an increasing number of arbovirus outbreaks have affected tropical islands worldwide. We examined the available literature in peer-reviewed journals, from the second half of the 20th century until 2018, with the aim of gathering an overall picture of the emergence of arboviruses in these islands. In addition, we included information on environmental and social drivers specific to island setting that can facilitate the emergence of outbreaks. Within the context of the One Health approach, our review highlights how the emergence of arboviruses in tropical islands is linked to the complex interplay between their unique ecological settings and to the recent changes in local and global sociodemographic patterns. We also advocate for greater coordination between stakeholders in developing novel prevention and mitigation approaches for an intractable problem.
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Affiliation(s)
- Carla Mavian
- Department of Pathology, Immunology and Laboratory Medicine, College of Medicine, University of Florida, Gainesville, FL 32611, USA.
- Emerging Pathogens Institute University of Florida, Gainesville, FL 32611, USA.
| | - Melissa Dulcey
- Emerging Pathogens Institute University of Florida, Gainesville, FL 32611, USA.
- Department of Environmental and Global Health, College of Public Health and Health Professions, University of Florida, Gainesville, FL 32611, USA.
| | - Olga Munoz
- Emerging Pathogens Institute University of Florida, Gainesville, FL 32611, USA.
- Department of Environmental and Global Health, College of Public Health and Health Professions, University of Florida, Gainesville, FL 32611, USA.
- One Health Center of Excellence, University of Florida, Gainesville, FL 32611, USA.
| | - Marco Salemi
- Department of Pathology, Immunology and Laboratory Medicine, College of Medicine, University of Florida, Gainesville, FL 32611, USA.
- Emerging Pathogens Institute University of Florida, Gainesville, FL 32611, USA.
| | - Amy Y Vittor
- Emerging Pathogens Institute University of Florida, Gainesville, FL 32611, USA.
- Division of Infectious Diseases and Global Medicine, Department of Medicine, College of Medicine, University of Florida, Gainesville, FL 32611, USA.
| | - Ilaria Capua
- Emerging Pathogens Institute University of Florida, Gainesville, FL 32611, USA.
- One Health Center of Excellence, University of Florida, Gainesville, FL 32611, USA.
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