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Luo J, Havé M, Soulay F, Balliau T, Clément G, Tellier F, Zivy M, Avice JC, Masclaux-Daubresse C. Multi-omics analyses of sid2 mutant reflect the need of isochorismate synthase ICS1 to cope with sulfur limitation in Arabidopsis thaliana. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 118:1635-1651. [PMID: 38498624 DOI: 10.1111/tpj.16702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Revised: 02/07/2024] [Accepted: 02/20/2024] [Indexed: 03/20/2024]
Abstract
The SID2 (SA INDUCTION-DEFICIENT2) gene that encodes ICS1 (isochorismate synthase), plays a central role in salicylic acid biosynthesis in Arabidopsis. The sid2 and NahG (encoding a bacterial SA hydroxylase) overexpressing mutants (NahG-OE) have currently been shown to outperform wild type, presenting delayed leaf senescence, higher plant biomass and better seed yield. When grown under sulfate-limited conditions (low-S), sid2 mutants exhibited early leaf yellowing compared to the NahG-OE, the npr1 mutant affected in SA signaling pathway, and WT. This indicated that the hypersensitivity of sid2 to sulfate limitation was independent of the canonical npr1 SA-signaling pathway. Transcriptomic and proteomic analyses revealed that major changes occurred in sid2 when cultivated under low-S, changes that were in good accordance with early senescence phenotype and showed the exacerbation of stress responses. The sid2 mutants displayed a lower sulfate uptake capacity when cultivated under low-S and lower S concentrations in their rosettes. Higher glutathione concentrations in sid2 rosettes under low-S were in good accordance with the higher abundance of proteins involved in glutathione and ascorbate redox metabolism. Amino acid and lipid metabolisms were also strongly modified in sid2 under low-S. Depletion of total fatty acids in sid2 under low-S was consistent with the fact that S-metabolism plays a central role in lipid synthesis. Altogether, our results show that functional ICS1 is important for plants to cope with S limiting conditions.
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Affiliation(s)
- Jie Luo
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000, Versailles, France
| | - Marien Havé
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000, Versailles, France
| | - Fabienne Soulay
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000, Versailles, France
| | - Thierry Balliau
- UMR GQE- le Moulon, INRA, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91190, Gif-sur-Yvette, France
| | - Gilles Clément
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000, Versailles, France
| | - Frédérique Tellier
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000, Versailles, France
| | - Michel Zivy
- UMR GQE- le Moulon, INRA, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91190, Gif-sur-Yvette, France
| | - Jean-Christophe Avice
- UMR 950 EVA (Ecophysiologie Végétale & Agronomie), INRAE, Normandie Université (UNICAEN), Federation of Research Normandie Végétal (Fed4277 NORVEGE), 14032, Caen, France
| | - Céline Masclaux-Daubresse
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000, Versailles, France
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The Dynamics of Phosphorus Uptake and Remobilization during the Grain Development Period in Durum Wheat Plants. PLANTS 2022; 11:plants11081006. [PMID: 35448734 PMCID: PMC9029974 DOI: 10.3390/plants11081006] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 03/30/2022] [Accepted: 04/01/2022] [Indexed: 11/24/2022]
Abstract
Post-anthesis phosphorus (P) uptake and the remobilization of the previously acquired P are the principal sources of grain P nutrition in wheat. However, how the acquired P reaches the grains and its partitioning at the whole plant level remain poorly understood. Here, the temporal dynamics of the newly acquired P in durum wheat organs and its allocation to grain were examined using pulse-chase 32P-labeling experiments at 5 and 14 days after anthesis. Durum wheat plants were grown hydroponically under high and low P supplies. Each labeling experiment lasted for 24 h. Plants were harvested 24, 48, and 96 h after labeling. Low and high P treatments significantly affected the allocation of the newly acquired P at the whole plant level. Three days (96 h) after the first 32P-labeling, 8% and 4% of the newly acquired P from exogenous solution were allocated to grains, 73% and 55% to the remainder aboveground organs, and 19% and 41% to the roots at low and high P supplies, respectively. Three days after the second labeling, the corresponding values were 48% and 20% in grains, 44% and 53% in the remainder aboveground organs, and 8% and 27% in roots at low and high P supplies, respectively. These results reveal that the dynamics of P allocation to grain was faster in plants grown under low P supply than under high supply. However, the obtained results also indicate that the origin of P accumulated in durum wheat grains was mainly from P remobilization with little contribution from post-anthesis P uptake. The present study emphasizes the role of vegetative organs as temporary storage of P taken up during the grain filling period before its final allocation to grains.
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Krama T, Krams R, Munkevics M, Willow J, Popovs S, Elferts D, Dobkeviča L, Raibarte P, Rantala M, Contreras-Garduño J, Krams IA. Physiological stress and higher reproductive success in bumblebees are both associated with intensive agriculture. PeerJ 2022; 10:e12953. [PMID: 35256917 PMCID: PMC8898004 DOI: 10.7717/peerj.12953] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Accepted: 01/26/2022] [Indexed: 01/11/2023] Open
Abstract
Free-living organisms face multiple stressors in their habitats, and habitat quality often affects development and life history traits. Increasing pressures of agricultural intensification have been shown to influence diversity and abundance of insect pollinators, and it may affect their elemental composition as well. We compared reproductive success, body concentration of carbon (C) and nitrogen (N), and C/N ratio, each considered as indicators of stress, in the buff-tailed bumblebee (Bombus terrestris). Bumblebee hives were placed in oilseed rape fields and semi-natural old apple orchards. Flowering season in oilseed rape fields was longer than that in apple orchards. Reproductive output was significantly higher in oilseed rape fields than in apple orchards, while the C/N ratio of queens and workers, an indicator of physiological stress, was lower in apple orchards, where bumblebees had significantly higher body N concentration. We concluded that a more productive habitat, oilseed rape fields, offers bumblebees more opportunities to increase their fitness than a more natural habitat, old apple orchards, which was achieved at the expense of physiological stress, evidenced as a significantly higher C/N ratio observed in bumblebees inhabiting oilseed rape fields.
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Affiliation(s)
| | - Ronalds Krams
- Daugavpils University, Daugavpils, Latvia,Estonian University of Life Sciences, Tartu, Estonia
| | | | | | | | | | | | | | | | | | - Indrikis A. Krams
- Daugavpils University, Daugavpils, Latvia,University of Latvia, Riga, Latvia,University of Tartu, Tartu, Estonia
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Mondal S, Pramanik K, Panda D, Dutta D, Karmakar S, Bose B. Sulfur in Seeds: An Overview. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11030450. [PMID: 35161431 PMCID: PMC8838887 DOI: 10.3390/plants11030450] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Revised: 01/27/2022] [Accepted: 01/28/2022] [Indexed: 05/30/2023]
Abstract
Sulfur is a growth-limiting and secondary macronutrient as well as an indispensable component for several cellular components of crop plants. Over the years various scientists have conducted several experiments on sulfur metabolism based on different aspects of plants. Sulfur metabolism in seeds has immense importance in terms of the different sulfur-containing seed storage proteins, the significance of transporters in seeds, the role of sulfur during the time of seed germination, etc. The present review article is based on an overview of sulfur metabolism in seeds, in respect to source to sink relationships, S transporters present in the seeds, S-regulated seed storage proteins and the importance of sulfur at the time of seed germination. Sulfur is an essential component and a decidable factor for seed yield and the quality of seeds in terms of oil content in oilseeds, storage of qualitative proteins in legumes and has a significant role in carbohydrate metabolism in cereals. In conclusion, a few future perspectives towards a more comprehensive knowledge on S metabolism/mechanism during seed development, storage and germination have also been stated.
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Affiliation(s)
- Sananda Mondal
- Department of Crop Physiology, Institute of Agriculture, Visva-Bharati University, Sriniketan 731236, India;
| | - Kalipada Pramanik
- Department of Agronomy, Institute of Agriculture, Visva-Bharati University, Sriniketan 731236, India;
| | - Debasish Panda
- Department of Crop Physiology, Institute of Agriculture, Visva-Bharati University, Sriniketan 731236, India;
| | - Debjani Dutta
- Department of Plant Physiology, Faculty of Agriculture, Bidhan Chandra Krishi Viswavidyalaya, Mohanpur 741252, India; (D.D.); (S.K.)
| | - Snehashis Karmakar
- Department of Plant Physiology, Faculty of Agriculture, Bidhan Chandra Krishi Viswavidyalaya, Mohanpur 741252, India; (D.D.); (S.K.)
| | - Bandana Bose
- Department of Plant Physiology, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi 221005, India;
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Genome-wide association study identified candidate genes for seed size and seed composition improvement in M. truncatula. Sci Rep 2021; 11:4224. [PMID: 33608604 PMCID: PMC7895968 DOI: 10.1038/s41598-021-83581-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Accepted: 01/19/2021] [Indexed: 12/20/2022] Open
Abstract
Grain legumes are highly valuable plant species, as they produce seeds with high protein content. Increasing seed protein production and improving seed nutritional quality represent an agronomical challenge in order to promote plant protein consumption of a growing population. In this study, we used the genetic diversity, naturally present in Medicago truncatula, a model plant for legumes, to identify genes/loci regulating seed traits. Indeed, using sequencing data of 162 accessions from the Medicago HAPMAP collection, we performed genome-wide association study for 32 seed traits related to seed size and seed composition such as seed protein content/concentration, sulfur content/concentration. Using different GWAS and postGWAS methods, we identified 79 quantitative trait nucleotides (QTNs) as regulating seed size, 41 QTNs for seed composition related to nitrogen (i.e. storage protein) and sulfur (i.e. sulfur-containing amino acid) concentrations/contents. Furthermore, a strong positive correlation between seed size and protein content was revealed within the selected Medicago HAPMAP collection. In addition, several QTNs showed highly significant associations in different seed phenotypes for further functional validation studies, including one near an RNA-Binding Domain protein, which represents a valuable candidate as central regulator determining both seed size and composition. Finally, our findings in M. truncatula represent valuable resources to be exploitable in many legume crop species such as pea, common bean, and soybean due to its high synteny, which enable rapid transfer of these results into breeding programs and eventually help the improvement of legume grain production.
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Akmouche Y, Cheneby J, Lamboeuf M, Elie N, Laperche A, Bertheloot J, D'Hooghe P, Trouverie J, Avice JC, Etienne P, Brunel-Muguet S. Do nitrogen- and sulphur-remobilization-related parameters measured at the onset of the reproductive stage provide early indicators to adjust N and S fertilization in oilseed rape (Brassica napus L.) grown under N- and/or S-limiting supplies? PLANTA 2019; 250:2047-2062. [PMID: 31555901 DOI: 10.1007/s00425-019-03284-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Accepted: 09/19/2019] [Indexed: 06/10/2023]
Abstract
Specific combinations of physiological and molecular parameters associated with N and S remobilization measured at the onset of flowering were predictive of final crop performances in oilseed rape. Oilseed rape (Brassica napus L.) is a high nitrogen (N) and sulphur (S) demanding crop. Nitrogen- and S-remobilization processes allow N and S requirements to reproductive organs to be satisfied when natural uptake is reduced, thus ensuring high yield and seed quality. The quantification of physiological and molecular indicators of early N and S remobilization could be used as management tools to correct N and S fertilization. However, the major limit of this corrective strategy is to ensure the correlation between final performances-related variables and early measured parameters. In our study, four genotypes of winter oilseed rape (OSR) were grown until seed maturity under four nutritional modalities combining high and/or low N and S supplies. Plant final performances, i.e., seed production, N- and S-harvest indexes, seed N and S use efficiencies, and early parameters related to N- or S-remobilization processes, i.e., photosynthetic leaf area, N and S leaf concentrations, leaf soluble protein and leaf sulphate concentrations, and leaf RuBisCO abundance at flowering, were measured. We demonstrated that contrasting final performances existed according to the N and S supplies. An optimal N:S ratio supply could explain the treatment-specific crop performances, thus justifying N and S concurrent managements. Specific combinations of early measured plant parameters could be used to predict final performances irrespective of the nutritional supply and the genotype. This work demonstrates the potential of physiological and molecular indicators measured at flowering to reflect the functioning of N- and S-compound remobilization and to predict yield and quality penalties. However, because the predictive models are N and S independent, instant N and S leaf analyses are required to further adjust the adequate fertilization. This study is a proof of a concept which opens prospects regarding instant diagnostic tools in the context of N and S mineral fertilization management.
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Affiliation(s)
| | - Jeanne Cheneby
- UMR Agroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, 21000, Dijon, France
| | - Mickael Lamboeuf
- UMR Agroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, 21000, Dijon, France
| | - Nicolas Elie
- CEMABIO3, SFR 4206 ICORE, NORMANDIE UNIV, UNICAEN, 14000, Caen, France
| | - Anne Laperche
- IGEPP, Université de Rennes 1, Agrocampus, INRA, 35340, Le Rheu, France
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Comparative Transcriptome Analysis of Developing Seeds and Silique Wall Reveals Dynamic Transcription Networks for Effective Oil Production in Brassica napus L. Int J Mol Sci 2019; 20:ijms20081982. [PMID: 31018533 PMCID: PMC6515390 DOI: 10.3390/ijms20081982] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2019] [Revised: 04/09/2019] [Accepted: 04/19/2019] [Indexed: 02/07/2023] Open
Abstract
Vegetable oil is an essential constituent of the human diet and renewable raw material for industrial applications. Enhancing oil production by increasing seed oil content in oil crops is the most viable, environmentally friendly, and sustainable approach to meet the continuous demand for the supply of vegetable oil globally. An in-depth understanding of the gene networks involved in oil biosynthesis during seed development is a prerequisite for breeding high-oil-content varieties. Rapeseed (Brassica napus) is one of the most important oil crops cultivated on multiple continents, contributing more than 15% of the world’s edible oil supply. To understand the phasic nature of oil biosynthesis and the dynamic regulation of key pathways for effective oil accumulation in B. napus, comparative transcriptomic profiling was performed with developing seeds and silique wall (SW) tissues of two contrasting inbred lines with ~13% difference in seed oil content. Differentially expressed genes (DEGs) between high- and low-oil content lines were identified across six key developmental stages, and gene enrichment analysis revealed that genes related to photosynthesis, metabolism, carbohydrates, lipids, phytohormones, transporters, and triacylglycerol and fatty acid synthesis tended to be upregulated in the high-oil-content line. Differentially regulated DEG patterns were revealed for the control of metabolite and photosynthate production in SW and oil biosynthesis and accumulation in seeds. Quantitative assays of carbohydrates and hormones during seed development together with gene expression profiling of relevant pathways revealed their fundamental effects on effective oil accumulation. Our results thus provide insights into the molecular basis of high seed oil content (SOC) and a new direction for developing high-SOC rapeseed and other oil crops.
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Poisson E, Trouverie J, Brunel-Muguet S, Akmouche Y, Pontet C, Pinochet X, Avice JC. Seed Yield Components and Seed Quality of Oilseed Rape Are Impacted by Sulfur Fertilization and Its Interactions With Nitrogen Fertilization. FRONTIERS IN PLANT SCIENCE 2019; 10:458. [PMID: 31057573 PMCID: PMC6477675 DOI: 10.3389/fpls.2019.00458] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2018] [Accepted: 03/26/2019] [Indexed: 05/21/2023]
Abstract
Although the impact of sulfur (S) availability on the seed yield and nutritional quality of seeds has been demonstrated, its impact coupled with nitrogen (N) availability remains poorly studied in oilseed rape. A deeper knowledge of S and N interactions on seed yield components and seed quality could improve S and N fertilization management in a sustainable manner. To address this question, our goals were to determine the effects of nine different S fertilization management strategies (i) in interaction with different levels of N fertilization and (ii) according to the timing of application (by delaying and fractionating the S inputs) on agronomic performances and components of seed yield. The impact of these various managements of S and N fertilizations was also investigated on the seed quality with a focus on the composition of SSPs (mainly represented by napins and cruciferins). Our results highlighted synergetic effects on S and N use efficiencies at optimum rates of S and N inputs and antagonistic effects at excessive rates of one of the two elements. The data indicated that adjustment of S and N fertilization may lead to high seed yield and seed protein quality in a sustainable manner, especially in the context of reductions in N inputs. Delaying S inputs improved the seed protein quality by significantly increasing the relative abundance of napin (a SSP rich in S-containing amino acids) and decreasing the level of a cruciferin at 30 kDa (a SSP with low content of S-amino acids). These observations suggest that fractionated or delayed S fertilizer inputs could provide additional insights into the development of N and S management strategies to maintain or improve seed yield and protein quality. Our results also demonstrated that the S% in seeds and the napin:30 kDa-cruciferin ratio are highly dependent on S/N fertilization in relation to S supply. In addition, we observed a strong relationship between S% in seeds and the abundance of napin as well as the napin:30 kDa-cruciferin ratio, suggesting that S% may be used as a relevant index for the determination of protein quality in seeds in terms of S-containing amino acids.
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Affiliation(s)
- Emilie Poisson
- UMR Ecophysiologie Végétale et Agronomie (EVA), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal (FED4277), Caen, France
| | - Jacques Trouverie
- UMR Ecophysiologie Végétale et Agronomie (EVA), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal (FED4277), Caen, France
| | - S. Brunel-Muguet
- UMR Ecophysiologie Végétale et Agronomie (EVA), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal (FED4277), Caen, France
| | - Yacine Akmouche
- UMR Ecophysiologie Végétale et Agronomie (EVA), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal (FED4277), Caen, France
| | - Célia Pontet
- Terres Inovia, Centre de Recherche INRA de Toulouse, Bâtiment AGIR, Castanet-Tolosan, France
| | - Xavier Pinochet
- Terres Inovia, Direction Etudes et Recherches, Campus INRA Agro ParisTech, Thiverval Grignon, France
| | - Jean-Christophe Avice
- UMR Ecophysiologie Végétale et Agronomie (EVA), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal (FED4277), Caen, France
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9
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Germinative and Post-Germinative Behaviours of Brassica napus Seeds Are Impacted by the Severity of S Limitation Applied to the Parent Plants. PLANTS 2019; 8:plants8010012. [PMID: 30621264 PMCID: PMC6359240 DOI: 10.3390/plants8010012] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/13/2018] [Revised: 12/24/2018] [Accepted: 12/27/2018] [Indexed: 12/21/2022]
Abstract
In oilseed rape (Brassica napus L.), sulphur (S) limitation leads to a reduction of seed yield and nutritional quality, but also to a reduction of seed viability and vigour. S metabolism is known to be involved in the control of germination sensu stricto and seedling establishment. Nevertheless, how the germination and the first steps of plant growth are impacted in seeds produced by plants subjected to various sulphate limitations remains largely unknown. Therefore, this study aimed at determining the impact of various S-limited conditions applied to the mother plants on the germination indexes and the rate of viable seedlings in a spring oilseed rape cultivar (cv. Yudal). Using a 34S-sulphate pulse method, the sulphate uptake capacity during the seedling development was also investigated. The rate of viable seedlings was significantly reduced for seeds produced under the strongest S-limited conditions. This is related to a reduction of germination vigour and to perturbations of post-germinative events. Compared to green seedlings obtained from seeds produced by well-S-supplied plants, the viable seedlings coming from seeds harvested on plants subjected to severe S-limitation treatment showed nonetheless a higher dry biomass and were able to enhance the sulphate uptake by roots and the S translocation to shoots.
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10
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Poisson E, Brunel-Muguet S, Kauffmann F, Trouverie J, Avice JC, Mollier A. Sensitivity analyses for improving sulfur management strategies in winter oilseed rape. PLoS One 2018; 13:e0204376. [PMID: 30235325 PMCID: PMC6147610 DOI: 10.1371/journal.pone.0204376] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Accepted: 09/06/2018] [Indexed: 01/18/2023] Open
Abstract
Because sulfur (S) depletion in soil results in seed yield losses and grain quality degradation, especially in high S-demanding crops such as oilseed rape (Brassica napus L.), monitoring S fertilisation has become a central issue. Crop models can be efficient tools to conduct virtual experiments under different fertilisation management strategies. Using the process-based model SuMoToRI, we aimed to analyse the impact of different S fertilisation strategies coupled with the variablility observed in major plant characteristics in oilseed rape i.e. radiation use efficiency (RUE), carbon (C) allocation to the leaves (β) and specific leaf area (SLA) on plant performance-driven variables encompassing total biomass (TDW), S in the photosynthetic leaves (QSmobile.GL) and leaf area index (LAIGL). The contrasting S supply conditions differed in the amount of S (5 levels), and the timing of application (at bolting and/or at flowering, which included a fractioned condition). For this purpose, we performed a global sensitivity analysis (GSA) and calculated two sensitivity indices i.e. the Partial Raw Correlation Coefficient (PRCC) and the Sobol index. The results showed that whatever the timing of S supply, TDW, LAIGL and QSmobile.GL increased as S input increased. For a given S supply, there was no difference in TDW, LAIGL and QSmobile.GL between a single and a fractioned supply. Moreover, delaying the supply until flowering reduced the TDW and LAIGL whereas QSmobile.GL increased. Results showed that RUE had the greatest impact on TDW under all levels of S supply and all application timings, followed by β and SLA. RUE mostly impacted on QSmobile.GL, depending on S supply conditions, whereas it was the parameter with the least impact on LAIGL. Ultimately, our results provide strong evidence of optimised S fertilisation timings and plant characteristics that will guide producers in their agricultural practices by using specific varieties under constrained S fertilisation strategies.
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Affiliation(s)
- Emilie Poisson
- UMR 950 EVA (Ecophysiologie Végétale et Agronomie), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal, Caen, France
| | - Sophie Brunel-Muguet
- UMR 950 EVA (Ecophysiologie Végétale et Agronomie), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal, Caen, France
- * E-mail:
| | - François Kauffmann
- UMR 6139 Laboratoire de Mathématiques Nicolas Oresme, Normandie Université, UNICAEN, CNRS, Caen, France
| | - Jacques Trouverie
- UMR 950 EVA (Ecophysiologie Végétale et Agronomie), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal, Caen, France
| | - Jean-Christophe Avice
- UMR 950 EVA (Ecophysiologie Végétale et Agronomie), Normandie Université, UNICAEN, INRA, SFR Normandie Végétal, Caen, France
| | - Alain Mollier
- ISPA, Bordeaux Sciences Agro, INRA, Villenave d’Ornon, France
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Etienne P, Sorin E, Maillard A, Gallardo K, Arkoun M, Guerrand J, Cruz F, Yvin JC, Ourry A. Assessment of Sulfur Deficiency under Field Conditions by Single Measurements of Sulfur, Chloride and Phosphorus in Mature Leaves. PLANTS 2018; 7:plants7020037. [PMID: 29710786 PMCID: PMC6027431 DOI: 10.3390/plants7020037] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/06/2018] [Revised: 04/20/2018] [Accepted: 04/24/2018] [Indexed: 12/13/2022]
Abstract
Determination of S status is very important to detect S deficiency and prevent losses of yield and seed quality. The aim of this study was to investigate the possibility of using the ([Cl−]+[NO3−]+[PO43−]):[SO42−] ratio as an indicator of S nutrition under field conditions in Brassica napus and whether this could be applied to other species. Different S and nitrogen (N) fertilizations were applied on a S deficient field of oilseed rape to harvest mature leaves and analyze their anion and element contents in order to evaluate a new S nutrition indicator and useful threshold values. Large sets of commercial varieties were then used to test S deficiency scenarios. As main results, this study shown that, under field conditions, leaf ([Cl−]+[NO3−]+[PO43−]):[SO42−] ratio was increased by lowering S fertilization, indicating S deficiency. The usefulness of this ratio was also found for other species grown under controlled conditions and it could be simplified by using the elemental ([Cl]+[P]):[S] ratio. Threshold values were determined and used for the clustering of commercial varieties within three groups: S deficient, at risk of S deficiency and S sufficient. The ([Cl]+[P]):[S] ratio quantified under field conditions, can be used as an early and accurate diagnostic tool to manage S fertilization.
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Affiliation(s)
- Philippe Etienne
- Normandie Université, 14032 Caen CEDEX 5, France.
- Etienne Philippe, Normandie Université-INRA 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, UNICAEN, CS14032, 14032 Caen CEDEX 5, France.
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, UNICAEN, CS14032, 14032 Caen CEDEX 5, France.
| | - Elise Sorin
- Normandie Université, 14032 Caen CEDEX 5, France.
- Etienne Philippe, Normandie Université-INRA 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, UNICAEN, CS14032, 14032 Caen CEDEX 5, France.
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, UNICAEN, CS14032, 14032 Caen CEDEX 5, France.
- Centre Mondial d'Innovation, CMI, Groupe Roullier, 27 Avenue Franklin Roosevelt, 35400 Saint-Malo, France.
| | - Anne Maillard
- Normandie Université, 14032 Caen CEDEX 5, France.
- Etienne Philippe, Normandie Université-INRA 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, UNICAEN, CS14032, 14032 Caen CEDEX 5, France.
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, UNICAEN, CS14032, 14032 Caen CEDEX 5, France.
| | - Karine Gallardo
- UMR Agroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, F-21000 Dijon, France.
| | - Mustapha Arkoun
- Centre Mondial d'Innovation, CMI, Groupe Roullier, 27 Avenue Franklin Roosevelt, 35400 Saint-Malo, France.
| | | | - Florence Cruz
- Centre Mondial d'Innovation, CMI, Groupe Roullier, 27 Avenue Franklin Roosevelt, 35400 Saint-Malo, France.
| | - Jean-Claude Yvin
- Centre Mondial d'Innovation, CMI, Groupe Roullier, 27 Avenue Franklin Roosevelt, 35400 Saint-Malo, France.
| | - Alain Ourry
- Normandie Université, 14032 Caen CEDEX 5, France.
- Etienne Philippe, Normandie Université-INRA 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, UNICAEN, CS14032, 14032 Caen CEDEX 5, France.
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, UNICAEN, CS14032, 14032 Caen CEDEX 5, France.
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12
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Huang KL, Zhang ML, Ma GJ, Wu H, Wu XM, Ren F, Li XB. Transcriptome profiling analysis reveals the role of silique in controlling seed oil content in Brassica napus. PLoS One 2017; 12:e0179027. [PMID: 28594951 PMCID: PMC5464616 DOI: 10.1371/journal.pone.0179027] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2016] [Accepted: 05/23/2017] [Indexed: 12/13/2022] Open
Abstract
Seed oil content is an important agronomic trait in oilseed rape. However, the molecular mechanism of oil accumulation in rapeseeds is unclear so far. In this report, RNA sequencing technique (RNA-Seq) was performed to explore differentially expressed genes in siliques of two Brassica napus lines (HFA and LFA which contain high and low oil contents in seeds, respectively) at 15 and 25 days after pollination (DAP). The RNA-Seq results showed that 65746 and 66033 genes were detected in siliques of low oil content line at 15 and 25 DAP, and 65236 and 65211 genes were detected in siliques of high oil content line at 15 and 25 DAP, respectively. By comparative analysis, the differentially expressed genes (DEGs) were identified in siliques of these lines. The DEGs were involved in multiple pathways, including metabolic pathways, biosynthesis of secondary metabolic, photosynthesis, pyruvate metabolism, fatty metabolism, glycophospholipid metabolism, and DNA binding. Also, DEGs were related to photosynthesis, starch and sugar metabolism, pyruvate metabolism, and lipid metabolism at different developmental stage, resulting in the differential oil accumulation in seeds. Furthermore, RNA-Seq and qRT-PCR data revealed that some transcription factors positively regulate seed oil content. Thus, our data provide the valuable information for further exploring the molecular mechanism of lipid biosynthesis and oil accumulation in B. nupus.
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Affiliation(s)
- Ke-Lin Huang
- Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, China
| | - Mei-Li Zhang
- Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, China
| | - Guang-Jing Ma
- Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, China
| | - Huan Wu
- Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, China
| | - Xiao-Ming Wu
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, Wuhan, China
| | - Feng Ren
- Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, China
- * E-mail: (XBL); (FR)
| | - Xue-Bao Li
- Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, China
- * E-mail: (XBL); (FR)
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13
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Salon C, Avice JC, Colombié S, Dieuaide-Noubhani M, Gallardo K, Jeudy C, Ourry A, Prudent M, Voisin AS, Rolin D. Fluxomics links cellular functional analyses to whole-plant phenotyping. JOURNAL OF EXPERIMENTAL BOTANY 2017; 68:2083-2098. [PMID: 28444347 DOI: 10.1093/jxb/erx126] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Fluxes through metabolic pathways reflect the integration of genetic and metabolic regulations. While it is attractive to measure all the mRNAs (transcriptome), all the proteins (proteome), and a large number of the metabolites (metabolome) in a given cellular system, linking and integrating this information remains difficult. Measurement of metabolome-wide fluxes (termed the fluxome) provides an integrated functional output of the cell machinery and a better tool to link functional analyses to plant phenotyping. This review presents and discusses sets of methodologies that have been developed to measure the fluxome. First, the principles of metabolic flux analysis (MFA), its 'short time interval' version Inst-MFA, and of constraints-based methods, such as flux balance analysis and kinetic analysis, are briefly described. The use of these powerful methods for flux characterization at the cellular scale up to the organ (fruits, seeds) and whole-plant level is illustrated. The added value given by fluxomics methods for unravelling how the abiotic environment affects flux, the process, and key metabolic steps are also described. Challenges associated with the development of fluxomics and its integration with 'omics' for thorough plant and organ functional phenotyping are discussed. Taken together, these will ultimately provide crucial clues for identifying appropriate target plant phenotypes for breeding.
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Affiliation(s)
- Christophe Salon
- Agroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, 17 Rue Sully, BP 86510, 21065 Dijon Cedex, France
| | - Jean-Christophe Avice
- UNICAEN, UMR INRA 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, Université Caen Normandie, 14032 Caen Cedex 5, France
| | - Sophie Colombié
- UMR 1332 Biologie du Fruit et Pathologie, INRA, Université de Bordeaux, 33882 Villenave d'Ornon, France
| | - Martine Dieuaide-Noubhani
- UMR 1332 Biologie du Fruit et Pathologie, INRA, Université de Bordeaux, 33882 Villenave d'Ornon, France
| | - Karine Gallardo
- Agroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, 17 Rue Sully, BP 86510, 21065 Dijon Cedex, France
| | - Christian Jeudy
- Agroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, 17 Rue Sully, BP 86510, 21065 Dijon Cedex, France
| | - Alain Ourry
- UNICAEN, UMR INRA 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, Université Caen Normandie, 14032 Caen Cedex 5, France
| | - Marion Prudent
- Agroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, 17 Rue Sully, BP 86510, 21065 Dijon Cedex, France
| | - Anne-Sophie Voisin
- Agroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, 17 Rue Sully, BP 86510, 21065 Dijon Cedex, France
| | - Dominique Rolin
- UMR 1332 Biologie du Fruit et Pathologie, INRA, Université de Bordeaux, 33882 Villenave d'Ornon, France
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14
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Rapeseed-legume intercrops: plant growth and nitrogen balance in early stages of growth and development. Heliyon 2017; 3:e00261. [PMID: 28337486 PMCID: PMC5352734 DOI: 10.1016/j.heliyon.2017.e00261] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2016] [Revised: 01/27/2017] [Accepted: 03/08/2017] [Indexed: 11/21/2022] Open
Abstract
In this study we tested whether legumes can improve the growth and N and S nutrition of rapeseed in an intercropping system and compared the effect of mixtures on legume N-fixation and soil N-resources. Rapeseed was cultivated in low N conditions in monocrops using one (R) or two plants (RR) per pot and in mixtures with lupine, clover or vetch. The R monocrop was the most relevant control, intraspecific competition inducing a significant growth delay resulting in a significantly lower leaf number, in RR monocrop compared to R and the three mixtures considered. Plant biomass, and the N and S contents of rapeseed grown in mixtures were the same than those measured in R monocrop. Compared to the monocrop, the proportion of N derived from the atmosphere was increased by 34, 140 and 290% in lupine, clover and vetch, respectively when intercropped with rapeseed. In mixture with clover and lupine, the soil N pool at harvest was higher than in other treatments, while N export by crop was constant. Legumes suffered from competition for soil S resulting in a decrease of 40% in their S content compared to the monocrop. Compared to rapeseeds grown in R monocrop and in mixture with lupine and vetch, rapeseed mixed with clover showed significantly higher SPAD values in old leaves. In our conditions, mixing legumes with rapeseed is relevant to reduce N fertilization and improve nutrition and growth of rapeseed.
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15
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Almuziny M, Decker C, Wang D, Gerard P, Tharayil N. Nutrient Supply and Simulated Herbivory Differentially Alter the Metabolite Pools and the Efficacy of the Glucosinolate-Based Defense System in Brassica Species. J Chem Ecol 2017; 43:129-142. [DOI: 10.1007/s10886-016-0811-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2016] [Revised: 11/27/2016] [Accepted: 12/05/2016] [Indexed: 11/24/2022]
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16
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Billard V, Maillard A, Coquet L, Jouenne T, Cruz F, Garcia-Mina JM, Yvin JC, Ourry A, Etienne P. Mg deficiency affects leaf Mg remobilization and the proteome in Brassica napus. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2016; 107:337-343. [PMID: 27362297 DOI: 10.1016/j.plaphy.2016.06.025] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2016] [Revised: 06/16/2016] [Accepted: 06/16/2016] [Indexed: 05/06/2023]
Abstract
In order to cope with variable mineral nutrient availability, higher plants have developed numerous strategies including the remobilization of nutrients from source to sink tissues. However, such processes remain relatively unknown for magnesium (Mg), which is the third most important cation in plant tissues. Using Mg depletion of Brassica napus, we have demonstrated that Mg is remobilized from old leaves to young shoot tissues. Moreover, this study showed that Mg depletion induces modification of nutrient uptake, especially Zn and Mn. Finally, comparative proteomic analysis of old leaves (source of Mg) revealed amongst other results that some proteins requiring Mg for their functionality (isocitrate dehydrogenase for example) were up-regulated. Moreover, down-regulation of proteases suggested that mobilization of Mg from old leaves was not associated with senescence.
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Affiliation(s)
- Vincent Billard
- Normandie Université, Caen, France; UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Esplanade de la Paix, CS14032, 14032, Caen Cedex 5, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Esplanade de la Paix, CS14032, 14032, Caen Cedex 5, France
| | - Anne Maillard
- Normandie Université, Caen, France; UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Esplanade de la Paix, CS14032, 14032, Caen Cedex 5, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Esplanade de la Paix, CS14032, 14032, Caen Cedex 5, France
| | - Laurent Coquet
- Plateforme de Protéomique PISSARO, UMR6270 CNRS Faculté des Sciences de Rouen, 76821, Mont-Saint-Aignan, France
| | - Thierry Jouenne
- Plateforme de Protéomique PISSARO, UMR6270 CNRS Faculté des Sciences de Rouen, 76821, Mont-Saint-Aignan, France
| | - Florence Cruz
- Agro Innovation International, Centre Mondial d'Innovation, Groupe Roullier, 18 Avenue Franklin Roosevelt, BP 70158, 35401, Saint Malo Cedex, France
| | | | - Jean-Claude Yvin
- Agro Innovation International, Centre Mondial d'Innovation, Groupe Roullier, 18 Avenue Franklin Roosevelt, BP 70158, 35401, Saint Malo Cedex, France
| | - Alain Ourry
- Normandie Université, Caen, France; UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Esplanade de la Paix, CS14032, 14032, Caen Cedex 5, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Esplanade de la Paix, CS14032, 14032, Caen Cedex 5, France
| | - Philippe Etienne
- Normandie Université, Caen, France; UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Esplanade de la Paix, CS14032, 14032, Caen Cedex 5, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Esplanade de la Paix, CS14032, 14032, Caen Cedex 5, France.
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17
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Koprivova A, Kopriva S. Sulfur metabolism and its manipulation in crops. J Genet Genomics 2016; 43:623-629. [PMID: 27582269 DOI: 10.1016/j.jgg.2016.07.001] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2016] [Accepted: 07/12/2016] [Indexed: 12/27/2022]
Affiliation(s)
- Anna Koprivova
- Botanical Institute and Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
| | - Stanislav Kopriva
- Botanical Institute and Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany.
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18
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Lee BR, Zaman R, Avice JC, Ourry A, Kim TH. Sulfur Use Efficiency Is a Significant Determinant of Drought Stress Tolerance in Relation to Photosynthetic Activity in Brassica napus Cultivars. FRONTIERS IN PLANT SCIENCE 2016; 7:459. [PMID: 27092167 PMCID: PMC4824789 DOI: 10.3389/fpls.2016.00459] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2016] [Accepted: 03/24/2016] [Indexed: 05/23/2023]
Abstract
To investigate the varietal difference in sulfur use efficiency (SUE) and drought stress tolerance, Brassica napus 'Mosa' and 'Saturnin' were exposed to polyethylene glycol (PEG)-induced drought stress for 72 h. Direct quantification of S uptake, de novo synthesis of amino acids and proteins was performed by tracing (34)S. The responses of photosynthetic activity in relation to SUE were also examined. The total amount of newly absorbed S decreased with drought stress in both cultivars but the decrease rate was significantly higher in Mosa (-64%) than in Saturnin (-41%). Drought stress also decreased the amount of S assimilated into amino acids ((34)S-amino acids) and proteins ((34)S-proteins). The total amount of S incorporated into amino acids and proteins was generally higher in Saturnin (663.7 μg S per plant) than in Mosa (337.3 μg S per plant). The estimation of SUE based on S uptake (SUpE) and S assimilation (SUaE) showed that SUE was much higher in Saturnin than in Mosa. The inhibition of photosynthetic activity including Rubisco protein degradation caused by drought stress was much lower in the cultivar with higher SUE (Saturnin). The present study clearly indicates that the genotype with higher SUE is more tolerant to PEG-induced drought stress.
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Affiliation(s)
- Bok-Rye Lee
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture and Life Science, Chonnam National UniversityGwangju, South Korea; Biotechnology Research Institute, Chonnam National UniversityGwangju, South Korea
| | - Rashed Zaman
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture and Life Science, Chonnam National University Gwangju, South Korea
| | - Jean-Christophe Avice
- Université de Caen Basse-NormandieCaen, France; UMR INRA-UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N, Université de Caen Basse NormandieCaen, France
| | - Alain Ourry
- Université de Caen Basse-NormandieCaen, France; UMR INRA-UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N, Université de Caen Basse NormandieCaen, France
| | - Tae-Hwan Kim
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture and Life Science, Chonnam National University Gwangju, South Korea
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19
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Sorin E, Etienne P, Maillard A, Zamarreño AM, Garcia-Mina JM, Arkoun M, Jamois F, Cruz F, Yvin JC, Ourry A. Effect of sulphur deprivation on osmotic potential components and nitrogen metabolism in oilseed rape leaves: identification of a new early indicator. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:6175-89. [PMID: 26139826 DOI: 10.1093/jxb/erv321] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Identification of early sulphur (S) deficiency indicators is important for species such as Brassica napus, an S-demanding crop in which yield and the nutritional quality of seeds are negatively affected by S deficiency. Because S is mostly stored as SO4 (2-) in leaf cell vacuoles and can be mobilized during S deficiency, this study investigated the impact of S deprivation on leaf osmotic potential in order to identify compensation processes. Plants were exposed for 28 days to S or to chlorine deprivation in order to differentiate osmotic and metabolic responses. While chlorine deprivation had no significant effects on growth, osmotic potential and nitrogen metabolism, Brassica napus revealed two response periods to S deprivation. The first one occurred during the first 13 days during which plant growth was maintained as a result of vacuolar SO4 (2-) mobilization. In the meantime, leaf osmotic potential of S-deprived plants remained similar to control plants despite a reduction in the SO4 (2-) osmotic contribution, which was fully compensated by an increase in NO3 (-), PO4 (3-) and Cl(-) accumulation. The second response occurred after 13 days of S deprivation with a significant reduction in growth, leaf osmotic potential, NO3 (-) uptake and NO3 (-) reductase activity, whereas amino acids and NO3 (-) were accumulated. This kinetic analysis of S deprivation suggested that a ([Cl(-)]+[NO3 (-)]+[PO4 (3-)]):[SO4 (2-)] ratio could provide a relevant indicator of S deficiency, modified nearly as early as the over-expression of genes encoding SO4 (2-) tonoplastic or plasmalemmal transporters, with the added advantage that it can be easily quantified under field conditions.
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Affiliation(s)
- Elise Sorin
- Normandie Université, 14032 Caen, France UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, CS14032, 14032 Caen Cedex 5, France INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, CS14032, 14032 Caen Cedex 5, France Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, 55 Boulevard Jules Verger, 35800 Dinard, France
| | - Philippe Etienne
- Normandie Université, 14032 Caen, France UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, CS14032, 14032 Caen Cedex 5, France INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, CS14032, 14032 Caen Cedex 5, France
| | - Anne Maillard
- Normandie Université, 14032 Caen, France UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, CS14032, 14032 Caen Cedex 5, France INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, CS14032, 14032 Caen Cedex 5, France
| | - Angel-Mari Zamarreño
- Timac Agro Spain, Poligono de Arazuri-Orcoyen Calle C No. 32, 31160 Orcoyen, Spain
| | | | - Mustapha Arkoun
- Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, 55 Boulevard Jules Verger, 35800 Dinard, France
| | - Frank Jamois
- Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, 55 Boulevard Jules Verger, 35800 Dinard, France
| | - Florence Cruz
- Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, 55 Boulevard Jules Verger, 35800 Dinard, France
| | - Jean-Claude Yvin
- Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, 55 Boulevard Jules Verger, 35800 Dinard, France
| | - Alain Ourry
- Normandie Université, 14032 Caen, France UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, CS14032, 14032 Caen Cedex 5, France INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Esplanade de la Paix, CS14032, 14032 Caen Cedex 5, France
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20
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Girondé A, Etienne P, Trouverie J, Bouchereau A, Le Cahérec F, Leport L, Orsel M, Niogret MF, Nesi N, Carole D, Soulay F, Masclaux-Daubresse C, Avice JC. The contrasting N management of two oilseed rape genotypes reveals the mechanisms of proteolysis associated with leaf N remobilization and the respective contributions of leaves and stems to N storage and remobilization during seed filling. BMC PLANT BIOLOGY 2015; 15:59. [PMID: 25848818 PMCID: PMC4384392 DOI: 10.1186/s12870-015-0437-1] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2014] [Accepted: 01/23/2015] [Indexed: 05/02/2023]
Abstract
BACKGROUND Oilseed rape is the third largest oleaginous crop in the world but requires high levels of N fertilizer of which only 50% is recovered in seeds. This weak N use efficiency is associated with a low foliar N remobilization, leading to a significant return of N to the soil and a risk of pollution. Contrary to what is observed during senescence in the vegetative stages, N remobilization from stems and leaves is considered efficient during monocarpic senescence. However, the contribution of stems towards N management and the cellular mechanisms involved in foliar remobilization remain largely unknown. To reach this goal, the N fluxes at the whole plant level from bolting to mature seeds and the processes involved in leaf N remobilization and proteolysis were investigated in two contrasting genotypes (Aviso and Oase) cultivated under ample or restricted nitrate supply. RESULTS During seed filling in both N conditions, Oase efficiently allocated the N from uptake to seeds while Aviso favoured a better N remobilization from stems and leaves towards seeds. Nitrate restriction decreased seed yield and oil quality for both genotypes but Aviso had the best seed N filling. Under N limitation, Aviso had a better N remobilization from leaves to stems before the onset of seed filling. Afterwards, the higher N remobilization from stems and leaves of Aviso led to a higher final N amount in seeds. This high leaf N remobilization is associated with a better degradation/export of insoluble proteins, oligopeptides, nitrate and/or ammonia. By using an original method based on the determination of Rubisco degradation in the presence of inhibitors of proteases, efficient proteolysis associated with cysteine proteases and proteasome activities was identified as the mechanism of N remobilization. CONCLUSION The results confirm the importance of foliar N remobilization after bolting to satisfy seed filling and highlight that an efficient proteolysis is mainly associated with (i) cysteine proteases and proteasome activities and (ii) a fine coordination between proteolysis and export mechanisms. In addition, the stem may act as transient storage organs in the case of an asynchronism between leaf N remobilization and N demand for seed filling.
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Affiliation(s)
- Alexandra Girondé
- />Université de Caen Basse-Normandie, F-14032 Caen, France
- />UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie & Nutritions N.C.S., F-14032 Caen, France
- />INRA, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie & Nutritions N.C.S., F-14032 Caen, France
| | - Philippe Etienne
- />Université de Caen Basse-Normandie, F-14032 Caen, France
- />UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie & Nutritions N.C.S., F-14032 Caen, France
- />INRA, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie & Nutritions N.C.S., F-14032 Caen, France
| | - Jacques Trouverie
- />Université de Caen Basse-Normandie, F-14032 Caen, France
- />UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie & Nutritions N.C.S., F-14032 Caen, France
- />INRA, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie & Nutritions N.C.S., F-14032 Caen, France
| | - Alain Bouchereau
- />INRA, UMR 1349 Institut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université de Rennes 1, F-35653 Le Rheu, France
| | - Françoise Le Cahérec
- />INRA, UMR 1349 Institut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université de Rennes 1, F-35653 Le Rheu, France
| | - Laurent Leport
- />INRA, UMR 1349 Institut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université de Rennes 1, F-35653 Le Rheu, France
| | - Mathilde Orsel
- />INRA, UMR 1349 Institut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université de Rennes 1, F-35653 Le Rheu, France
- />UMR 1345 Institut de Recherche en Horticulture et Semences, SFR 4207 QUASAV, PRES L’UNAM, Université d’Angers, F-49045 Angers, France
- />UMR 1345 Institut de Recherche en Horticulture et Semences, AgroCampus-Ouest, F-49045 Angers, France
| | - Marie-Françoise Niogret
- />INRA, UMR 1349 Institut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université de Rennes 1, F-35653 Le Rheu, France
| | - Nathalie Nesi
- />INRA, UMR 1349 Institut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université de Rennes 1, F-35653 Le Rheu, France
| | - Deleu Carole
- />INRA, UMR 1349 Institut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université de Rennes 1, F-35653 Le Rheu, France
| | - Fabienne Soulay
- />Département Adaptation des Plantes à l’Environnement, UMR 1318, INRA, Institut Jean-Pierre Bourgin, RD10, 78026 Versailles, Cedex France
| | - Céline Masclaux-Daubresse
- />Département Adaptation des Plantes à l’Environnement, UMR 1318, INRA, Institut Jean-Pierre Bourgin, RD10, 78026 Versailles, Cedex France
| | - Jean-Christophe Avice
- />Université de Caen Basse-Normandie, F-14032 Caen, France
- />UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie & Nutritions N.C.S., F-14032 Caen, France
- />INRA, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie & Nutritions N.C.S., F-14032 Caen, France
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21
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Brunel-Muguet S, Mollier A, Kauffmann F, Avice JC, Goudier D, Sénécal E, Etienne P. SuMoToRI, an Ecophysiological Model to Predict Growth and Sulfur Allocation and Partitioning in Oilseed Rape (Brassica napus L.) Until the Onset of Pod Formation. FRONTIERS IN PLANT SCIENCE 2015; 6:993. [PMID: 26635825 PMCID: PMC4647072 DOI: 10.3389/fpls.2015.00993] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2015] [Accepted: 10/29/2015] [Indexed: 05/02/2023]
Abstract
Sulfur (S) nutrition in rapeseed (Brassica napus L.) is a major concern for this high S-demanding crop, especially in the context of soil S oligotrophy. Therefore, predicting plant growth, S plant allocation (between the plant's compartments) and S pool partitioning (repartition of the mobile-S vs. non-mobile-S fractions) until the onset of reproductive phase could help in the diagnosis of S deficiencies during the early stages. For this purpose, a process-based model, SuMoToRI (Sulfur Model Toward Rapeseed Improvement), was developed up to the onset of pod formation. The key features rely on (i) the determination of the S requirements used for growth (structural and metabolic functions) through critical S dilution curves and (ii) the estimation of a mobile pool of S that is regenerated by daily S uptake and remobilization from senescing leaves. This study describes the functioning of the model and presents the model's calibration and evaluation. SuMoToRI was calibrated and evaluated with independent datasets from greenhouse experiments under contrasting S supply conditions. It is run with a small number of parameters with generic values, except in the case of the radiation use efficiency, which was shown to be modulated by S supply. The model gave satisfying predictions of the dynamics of growth, S allocation between compartments and S partitioning, such as the mobile-S fraction in the leaves, which is an indicator of the remobilization potential toward growing sinks. The mechanistic features of SuMoToRI provide a process-based framework that has enabled the description of the S remobilizing process in a species characterized by senescence during the vegetative phase. We believe that this model structure could be useful for modeling S dynamics in other arable crops that have similar senescence-related characteristics.
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Affiliation(s)
- Sophie Brunel-Muguet
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
- Normandie UniversitéCaen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
- *Correspondence: Sophie Brunel-Muguet,
| | - Alain Mollier
- INRA, UMR 1391 ISPAVillenave d’Ornon, France
- Bordeaux Sciences Agro, UMR 1391 ISPAGradignan, France
| | - François Kauffmann
- UMR CNRS-UCBN 6139 Laboratoire de Mathématiques Nicolas Oresme, UFR des Sciences, Campus 2, Université de Caen Basse-NormandieCaen, France
| | - Jean-Christophe Avice
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
- Normandie UniversitéCaen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
| | - Damien Goudier
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
- Normandie UniversitéCaen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
| | - Emmanuelle Sénécal
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
- Normandie UniversitéCaen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
| | - Philippe Etienne
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
- Normandie UniversitéCaen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
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22
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Brunel-Muguet S, D'Hooghe P, Bataillé MP, Larré C, Kim TH, Trouverie J, Avice JC, Etienne P, Dürr C. Heat stress during seed filling interferes with sulfur restriction on grain composition and seed germination in oilseed rape (Brassica napus L.). FRONTIERS IN PLANT SCIENCE 2015; 6:213. [PMID: 25914702 PMCID: PMC4392296 DOI: 10.3389/fpls.2015.00213] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2015] [Accepted: 03/16/2015] [Indexed: 05/04/2023]
Abstract
In coming decades, increasing temperatures are expected to impact crop yield and seed quality. To develop low input systems, the effects of temperature and sulfur (S) nutrition in oilseed rape, a high S demanding crop, need to be jointly considered. In this study, we investigated the effects of temperatures [High Temperature (HT), 33°C/day, 19°C/night vs. Control Temperature (Ctrl T), 20°C/day, 15°C/day] and S supply [High S (HS), 500 μm SO(2-) 4 vs. Low S (LS), 8.7 μM SO(2-) 4] during seed filling on (i) yield components [seed number, seed dry weight (SDW) and seed yield], (ii) grain composition [nitrogen (N) and S contents] and quality [fatty acid (FA) composition and seed storage protein (SSP) accumulation] and (iii) germination characteristics (pre-harvest sprouting, germination rates and abnormal seedlings). Abscisic acid (ABA), soluble sugar contents and seed conductivity were also measured. HT and LS decreased the number of seeds per plant. SDW was less affected due to compensatory effects since the number of seeds decreased under stress conditions. While LS had negative effects on seed composition by reducing the FA contents and increasing the ratio S-poor SSPs (12S globulins)/S-rich SSPs (2S albumins) ratio, HT had positive effects by increasing S and FA contents and decreasing the C18:2/C18:3 ratio and the 12S/2S protein ratio. Seeds produced under HT showed high pre-harvest sprouting rates along with decreased ABA contents and high rates of abnormal seedlings. HT and LS restriction significantly accelerated germination times. High conductivity, which indicates poor seed storage capacity, was higher in HT seeds. Consistently, the lower ratio of (raffinose + stachyose)/sucrose in HT seeds indicated low seed storage capacity. We demonstrated the effects of HT and LS on grain and on germination characteristics. These results suggest that hormonal changes might control several seed characteristics simultaneously.
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Affiliation(s)
- Sophie Brunel-Muguet
- INRA, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
- *Correspondence: Sophie Brunel-Muguet, UMR 950 EVA-, Université Caen-Basse Normandie, Esplanade de la Paix, 14032 Caen, France
| | - Philippe D'Hooghe
- UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
| | - Marie-Paule Bataillé
- UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
| | - Colette Larré
- INRA UR 1268 BIA, Rue de la GéraudièreNantes, France
| | - Tae-Hwan Kim
- UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture and Life Science, Chonnam National UniversityGwangju, South Korea
| | - Jacques Trouverie
- UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
| | - Jean-Christophe Avice
- UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
| | - Philippe Etienne
- UCBN, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie et Nutritions N.C.S.Caen, France
| | - Carolyne Dürr
- INRA, UMR 1345, Institute of Research on Horticulture and Seeds, SFR QUASAVBeaucouzé, France
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23
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Billard V, Maillard A, Garnica M, Cruz F, Garcia-Mina JM, Yvin JC, Ourry A, Etienne P. Zn deficiency in Brassica napus induces Mo and Mn accumulation associated with chloroplast proteins variation without Zn remobilization. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2015; 86:66-71. [PMID: 25438138 DOI: 10.1016/j.plaphy.2014.11.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2014] [Accepted: 11/04/2014] [Indexed: 06/04/2023]
Abstract
The importance of zinc (Zn) has been of little concern in human nutrition despite a strong decrease of this element in crops since the rise of high yielding varieties. For better food quality, Zn biofortification can be used, but will be optimal only if mechanisms governing Zn management are better known. Using Zn deficiency, we are able to demonstrate that Zn is not remobilized in Brassica napus (B. napus). Thus, remobilization processes should not be targeted by biofortification strategies. This study also complemented previous work by investigating leaf responses to Zn deficiency, especially from proteomic and ionomic points of view, showing for example, an increase in Manganese (Mn) content and of the Mn-dependent protein, Oxygen Evolving Enhancer.
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Affiliation(s)
- Vincent Billard
- Normandie University, Caen, France; UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, F-14032 Caen, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, F-14032 Caen, France.
| | - Anne Maillard
- Normandie University, Caen, France; UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, F-14032 Caen, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, F-14032 Caen, France.
| | - Maria Garnica
- Timac Agro Spain, Poligono de Arazuri-Orcoyen Calle C n°32, 31160 Orcoyen, Spain.
| | - Florence Cruz
- Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, 55 boulevard Jules Verger, 35800 Dinard, France.
| | | | - Jean-Claude Yvin
- Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, 55 boulevard Jules Verger, 35800 Dinard, France.
| | - Alain Ourry
- Normandie University, Caen, France; UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, F-14032 Caen, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, F-14032 Caen, France.
| | - Philippe Etienne
- Normandie University, Caen, France; UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, F-14032 Caen, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, F-14032 Caen, France.
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24
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Hua S, Chen ZH, Zhang Y, Yu H, Lin B, Zhang D. Chlorophyll and carbohydrate metabolism in developing silique and seed are prerequisite to seed oil content of Brassica napus L. BOTANICAL STUDIES 2014; 55:34. [PMID: 28510961 PMCID: PMC5432831 DOI: 10.1186/1999-3110-55-34] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2013] [Accepted: 12/03/2013] [Indexed: 05/11/2023]
Abstract
BACKGROUND Although the seed oil content in canola is a crucial quality determining trait, the regulatory mechanisms of its formation are not fully discovered. This study compared the silique and seed physiological characteristics including fresh and dry weight, seed oil content, chlorophyll content, and carbohydrate content in a high oil content line (HOCL) and a low oil content line (LOCL) of canola derived from a recombinant inbred line in 2010, 2011, and 2012. The aim of the investigation is to uncover the physiological regulation of silique and seed developmental events on seed oil content in canola. RESULTS On average, 83% and 86% of silique matter while 69% and 63% of seed matter was produced before 30 days after anthesis (DAA) in HOCL and LOCL, respectively, over three years. Furthermore, HOCL exhibited significantly higher fresh and dry matter at most developmental stages of siliques and seeds. From 20 DAA, lipids were deposited in the seed of HOCL significantly faster than that of LOCL, which was validated by transmission electron microscopy, showing that HOCL accumulates considerable more oil bodies in the seed cells. Markedly higher silique chlorophyll content was observed in HOCL consistently over the three consecutive years, implying a higher potential of photosynthetic capacity in siliques of HOCL. As a consequence, HOCL exhibited significantly higher content of fructose, glucose, sucrose, and starch mainly at 20 to 45 DAA, a key stage of seed lipid deposition. Moreover, seed sugar content was usually higher than silique indicating the importance of sugar transportation from siliques to seeds as substrate for lipid biosynthesis. The much lower silique cellulose content in HOCL was beneficial for lipid synthesis rather than consuming excessive carbohydrate for cell wall. CONCLUSIONS Superior physiological characteristics of siliques in HOCL showed advantage to produce more photosynthetic assimilates, which were highly correlated to seed oil contents.
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Affiliation(s)
- Shuijin Hua
- Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021 P.R. China
| | - Zhong-Hua Chen
- School of Science and Health, University of Western Sydney, Penrith, 2751NSW Australia
| | - Yaofeng Zhang
- Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021 P.R. China
| | - Huasheng Yu
- Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021 P.R. China
| | - Baogang Lin
- Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021 P.R. China
| | - Dongqing Zhang
- Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021 P.R. China
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25
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Rodríguez-Hernández MDC, Moreno DA, Carvajal M, Martínez-Ballesta MDC. Genotype influences sulfur metabolism in broccoli (Brassica oleracea L.) under elevated CO2 and NaCl stress. PLANT & CELL PHYSIOLOGY 2014; 55:2047-2059. [PMID: 25246493 DOI: 10.1093/pcp/pcu130] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Climatic change predicts elevated salinity in soils as well as increased carbon dioxide dioxide [CO2] in the atmosphere. The present study aims to determine the effect of combined salinity and elevated [CO2] on sulfur (S) metabolism and S-derived phytochemicals in green and purple broccoli (cv. Naxos and cv. Viola, respectively). Elevated [CO2] involved the amelioration of salt stress, especially in cv. Viola, where a lower biomass reduction by salinity was accompanied by higher sodium (Na(+)) and chloride (Cl(-)) compartmentation in the vacuole. Moreover, salinity and elevated [CO2] affected the mineral and glucosinolate contents and the activity of biosynthetic enzymes of S-derived compounds and the degradative enzyme of glucosinolate metabolism, myrosinase, as well as the related amino acids and the antioxidant glutathione (GSH). In cv. Naxos, elevated [CO2] may trigger the antioxidant response to saline stress by means of increased GSH concentration. Also, in cv. Naxos, indolic glucosinolates were more influenced by the NaCl×CO2 interaction whereas in cv. Viola the aliphatic glucosinolates were significantly increased by these conditions. Salinity and elevated [CO2] enhanced the S cellular partitioning and metabolism affecting the myrosinase-glucosinolate system.
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Affiliation(s)
- María del Carmen Rodríguez-Hernández
- Department of Plant Nutrition, Centro de Edafologia y Biologia Aplicada del Segura (CEBAS-CSIC), Campus de Espinardo, Edificio 25, E-Murcia, 30100, Spain
| | - Diego A Moreno
- Department of Food Science and Technology, Centro de Edafologia y Biologia Aplicada del Segura (CEBAS-CSIC), Campus de Espinardo, Edificio 25, E-Murcia, 30100, Spain
| | - Micaela Carvajal
- Department of Plant Nutrition, Centro de Edafologia y Biologia Aplicada del Segura (CEBAS-CSIC), Campus de Espinardo, Edificio 25, E-Murcia, 30100, Spain
| | - María del Carmen Martínez-Ballesta
- Department of Plant Nutrition, Centro de Edafologia y Biologia Aplicada del Segura (CEBAS-CSIC), Campus de Espinardo, Edificio 25, E-Murcia, 30100, Spain
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26
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Chao DY, Baraniecka P, Danku J, Koprivova A, Lahner B, Luo H, Yakubova E, Dilkes B, Kopriva S, Salt DE. Variation in sulfur and selenium accumulation is controlled by naturally occurring isoforms of the key sulfur assimilation enzyme ADENOSINE 5'-PHOSPHOSULFATE REDUCTASE2 across the Arabidopsis species range. PLANT PHYSIOLOGY 2014; 166:1593-608. [PMID: 25245030 PMCID: PMC4226352 DOI: 10.1104/pp.114.247825] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Natural variation allows the investigation of both the fundamental functions of genes and their role in local adaptation. As one of the essential macronutrients, sulfur is vital for plant growth and development and also for crop yield and quality. Selenium and sulfur are assimilated by the same process, and although plants do not require selenium, plant-based selenium is an important source of this essential element for animals. Here, we report the use of linkage mapping in synthetic F2 populations and complementation to investigate the genetic architecture of variation in total leaf sulfur and selenium concentrations in a diverse set of Arabidopsis (Arabidopsis thaliana) accessions. We identify in accessions collected from Sweden and the Czech Republic two variants of the enzyme ADENOSINE 5'-PHOSPHOSULFATE REDUCTASE2 (APR2) with strongly diminished catalytic capacity. APR2 is a key enzyme in both sulfate and selenate reduction, and its reduced activity in the loss-of-function allele apr2-1 and the two Arabidopsis accessions Hodonín and Shahdara leads to a lowering of sulfur flux from sulfate into the reduced sulfur compounds, cysteine and glutathione, and into proteins, concomitant with an increase in the accumulation of sulfate in leaves. We conclude from our observation, and the previously identified weak allele of APR2 from the Shahdara accession collected in Tadjikistan, that the catalytic capacity of APR2 varies by 4 orders of magnitude across the Arabidopsis species range, driving significant differences in sulfur and selenium metabolism. The selective benefit, if any, of this large variation remains to be explored.
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Affiliation(s)
- Dai-Yin Chao
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Patrycja Baraniecka
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - John Danku
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Anna Koprivova
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Brett Lahner
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Hongbing Luo
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Elena Yakubova
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Brian Dilkes
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Stanislav Kopriva
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - David E Salt
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
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27
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Rennenberg H, Herschbach C. A detailed view on sulphur metabolism at the cellular and whole-plant level illustrates challenges in metabolite flux analyses. JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:5711-24. [PMID: 25124317 DOI: 10.1093/jxb/eru315] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Understanding the dynamics of physiological process in the systems biology era requires approaches at the genome, transcriptome, proteome, and metabolome levels. In this context, metabolite flux experiments have been used in mapping metabolite pathways and analysing metabolic control. In the present review, sulphur metabolism was taken to illustrate current challenges of metabolic flux analyses. At the cellular level, restrictions in metabolite flux analyses originate from incomplete knowledge of the compartmentation network of metabolic pathways. Transport of metabolites through membranes is usually not considered in flux experiments but may be involved in controlling the whole pathway. Hence, steady-state and snapshot readings need to be expanded to time-course studies in combination with compartment-specific metabolite analyses. Because of species-specific differences, differences between tissues, and stress-related responses, the quantitative significance of different sulphur sinks has to be elucidated; this requires the development of methods for whole-sulphur metabolome approaches. Different cell types can contribute to metabolite fluxes to different extents at the tissue and organ level. Cell type-specific analyses are needed to characterize these contributions. Based on such approaches, metabolite flux analyses can be expanded to the whole-plant level by considering long-distance transport and, thus, the interaction of roots and the shoot in metabolite fluxes. However, whole-plant studies need detailed empirical and mathematical modelling that have to be validated by experimental analyses.
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Affiliation(s)
- Heinz Rennenberg
- Institute of Forest Sciences, Chair of Tree Physiology, University of Freiburg, Georges-Koehler-Allee 53, 79110 Freiburg, Germany Centre for Biosystems Analysis (ZBSA), University of Freiburg, Habsburgerstrasse 49, 79104 Freiburg, Germany
| | - Cornelia Herschbach
- Institute of Forest Sciences, Chair of Tree Physiology, University of Freiburg, Georges-Koehler-Allee 53, 79110 Freiburg, Germany
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28
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Billard V, Ourry A, Maillard A, Garnica M, Coquet L, Jouenne T, Cruz F, Garcia-Mina JM, Yvin JC, Etienne P. Copper-deficiency in Brassica napus induces copper remobilization, molybdenum accumulation and modification of the expression of chloroplastic proteins. PLoS One 2014; 9:e109889. [PMID: 25333918 PMCID: PMC4198169 DOI: 10.1371/journal.pone.0109889] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2014] [Accepted: 09/08/2014] [Indexed: 01/10/2023] Open
Abstract
During the last 40 years, crop breeding has strongly increased yields but has had adverse effects on the content of micronutrients, such as Fe, Mg, Zn and Cu, in edible products despite their sufficient supply in most soils. This suggests that micronutrient remobilization to edible tissues has been negatively selected. As a consequence, the aim of this work was to quantify the remobilization of Cu in leaves of Brassica napus L. during Cu deficiency and to identify the main metabolic processes that were affected so that improvements can be achieved in the future. While Cu deficiency reduced oilseed rape growth by less than 19% compared to control plants, Cu content in old leaves decreased by 61.4%, thus demonstrating a remobilization process between leaves. Cu deficiency also triggered an increase in Cu transporter expression in roots (COPT2) and leaves (HMA1), and more surprisingly, the induction of the MOT1 gene encoding a molybdenum transporter associated with a strong increase in molybdenum (Mo) uptake. Proteomic analysis of leaves revealed 33 proteins differentially regulated by Cu deficiency, among which more than half were located in chloroplasts. Eleven differentially expressed proteins are known to require Cu for their synthesis and/or activity. Enzymes that were located directly upstream or downstream of Cu-dependent enzymes were also differentially expressed. The overall results are then discussed in relation to remobilization of Cu, the interaction between Mo and Cu that occurs through the synthesis pathway of Mo cofactor, and finally their putative regulation within the Calvin cycle and the chloroplastic electron transport chain.
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Affiliation(s)
- Vincent Billard
- Normandie Université, Caen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Caen, France
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Caen, France
| | - Alain Ourry
- Normandie Université, Caen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Caen, France
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Caen, France
| | - Anne Maillard
- Normandie Université, Caen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Caen, France
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Caen, France
| | - Maria Garnica
- Timac Agro Spain, Poligono de Arazuri-Orcoyen, Orcoyen, Spain
| | - Laurent Coquet
- Plateforme de protéomique PISSARO, UMR6270 CNRS Faculté des Sciences de Rouen, Mont-Saint-Aignan, France
| | - Thierry Jouenne
- Plateforme de protéomique PISSARO, UMR6270 CNRS Faculté des Sciences de Rouen, Mont-Saint-Aignan, France
| | - Florence Cruz
- Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, Dinard, France
| | | | - Jean-Claude Yvin
- Centre de Recherche International en Agroscience, CRIAS-TAI, Groupe Roullier, Dinard, France
| | - Philippe Etienne
- Normandie Université, Caen, France
- UNICAEN, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Caen, France
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et nutritions N, C, S, Caen, France
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D'Hooghe P, Dubousset L, Gallardo K, Kopriva S, Avice JC, Trouverie J. Evidence for proteomic and metabolic adaptations associated with alterations of seed yield and quality in sulfur-limited Brassica napus L. Mol Cell Proteomics 2014; 13:1165-83. [PMID: 24554741 DOI: 10.1074/mcp.m113.034215] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
In Brassica napus, seed yield and quality are related to sulfate availability, but the seed metabolic changes in response to sulfate limitation remain largely unknown. To address this question, proteomics and biochemical studies were carried out on mature seeds obtained from plants grown under low sulfate applied at the bolting (LS32), early flowering (LS53), or start of pod filling (LS70) stage. The protein quality of all low-sulfate seeds was reduced and associated with a reduction of S-rich seed storage protein accumulation (as Cruciferin Cru4) and an increase of S-poor seed storage protein (as Cruciferin BnC1). This compensation allowed the protein content to be maintained in LS70 and LS53 seeds but was not sufficient to maintain the protein content in LS32 seeds. The lipid content and quality of LS53 and LS32 seeds were also affected, and these effects were primarily associated with a reduction of C18-derivative accumulation. Proteomics changes related to lipid storage, carbohydrate metabolism, and energy (reduction of caleosins, phosphoglycerate kinase, malate synthase, ATP-synthase β-subunit, and thiazole biosynthetic enzyme THI1 and accumulation of β-glucosidase and citrate synthase) provide insights into processes that may contribute to decreased oil content and altered lipid composition (in favor of long-chain fatty acids in LS53 and LS32 seeds). These data indicate that metabolic changes associated with S limitation responses affect seed storage protein composition and lipid quality. Proteins involved in plant stress response, such as dehydroascorbate reductase and Cu/Zn-superoxide dismutase, were also accumulated in LS53 and LS32 seeds, and this might be a consequence of reduced glutathione content under low S availability. LS32 treatment also resulted in (i) reduced germination vigor, as evidenced by lower germination indexes, (ii) reduced seed germination capacity, related to a lower seed viability, and (iii) a strong decrease of glyoxysomal malate synthase, which is essential for the use of fatty acids during seedling establishment.
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Salon C, Bataillé MP, Gallardo K, Jeudy C, Santoni AL, Trouverie J, Voisin AS, Avice JC. (34)S and (15)N labelling to model S and N flux in plants and determine the different components of N and S use efficiency. Methods Mol Biol 2014; 1090:335-46. [PMID: 24222425 DOI: 10.1007/978-1-62703-688-7_20] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
In order to highlight our understanding on ecosystems functioning and resource sharing/competition, either in artificial environment or agrosystems, according to changes in the climatic conditions, it is necessary to measure accurately element fluxes within plants. Stable isotopes allow tracking safely and accurately on a short time frame the behavior of elements in plants. After a short review devoted to isotopic studies of elemental flux within plants, we explain how a direct multiple labelling study might be conducted in a plant, so as to measure over short time nitrogen and sulfur acquisition, and assimilates arising from a labelled source.
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Affiliation(s)
- Christophe Salon
- INRA UMR 1347 Agroécologie INRA/Université de Bourgogne/AgroSup, Dijon Cedex, France
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31
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Girondé A, Dubousset L, Trouverie J, Etienne P, Avice JC. The impact of sulfate restriction on seed yield and quality of winter oilseed rape depends on the ability to remobilize sulfate from vegetative tissues to reproductive organs. FRONTIERS IN PLANT SCIENCE 2014; 5:695. [PMID: 25566272 PMCID: PMC4269117 DOI: 10.3389/fpls.2014.00695] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2014] [Accepted: 11/22/2014] [Indexed: 05/02/2023]
Abstract
Our current knowledge about sulfur (S) management by winter oilseed rape to satisfy the S demand of developing seeds is still scarce, particularly in relation to S restriction. Our goals were to determine the physiological processes related to S use efficiency that led to maintain the seed yield and quality when S limitation occurred at the bolting or early flowering stages. To address these questions, a pulse-chase (34)SO(2-) 4 labeling method was carried out in order to study the S fluxes from uptake and remobilization at the whole plant level. In response of S limitation at the bolting or early flowering stages, the leaves are the most important source organ for S remobilization during reproductive stages. By combining (34)S-tracer with biochemical fractionation in order to separate sulfate from other S-compounds, it appeared that sulfate was the main form of S remobilized in leaves at reproductive stages and that tonoplastic SULTR4-type transporters were specifically involved in the sulfate remobilisation in case of low S availability. In response to S limitation at the bolting stage, the seed yield and quality were dramatically reduced compared to control plants. These data suggest that the increase of both S remobilization from source leaves and the root proliferation in order to maximize sulfate uptake capacities, were not sufficient to maintain the seed yield and quality. When S limitation occurred at the early flowering stage, oilseed rape can optimize the mobilization of sulfate reserves from vegetative organs (leaves and stem) to satisfy the demand of seeds and maintain the seed yield and quality. Our study also revealed that the stem may act as a transient storage organ for remobilized S coming from source leaves before its utilization by seeds. The physiological traits (S remobilization, root proliferation, transient S storage in stem) observed under S limitation could be used in breeding programs to select oilseed rape genotypes with high S use efficiency.
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Affiliation(s)
- Alexandra Girondé
- Normandie UniversityCaen, France
- Université de Caen Basse Normandie, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
- Institut National de la Recherche Agronomique, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
| | - Lucie Dubousset
- Normandie UniversityCaen, France
- Université de Caen Basse Normandie, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
- Institut National de la Recherche Agronomique, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
| | - Jacques Trouverie
- Normandie UniversityCaen, France
- Université de Caen Basse Normandie, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
- Institut National de la Recherche Agronomique, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
| | - Philippe Etienne
- Normandie UniversityCaen, France
- Université de Caen Basse Normandie, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
- Institut National de la Recherche Agronomique, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
| | - Jean-Christophe Avice
- Normandie UniversityCaen, France
- Université de Caen Basse Normandie, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
- Institut National de la Recherche Agronomique, UMR INRA–UCBN 950 Ecophysiologie Végétale, Agronomie and Nutritions N.C.S.Caen, France
- *Correspondence: Jean-Christophe Avice, UMR INRA–UCBN 950 EVA, Ecophysiologie Végétale, Agronomie and Nutritions N.C.S., Université de Caen Basse-Normandie, Esplanade de la Paix, F-14032 Caen, France e-mail:
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D'Hooghe P, Bataillé MP, Trouverie J, Avice JC. A specific method of 34S labelling provides evidence that sulphate assimilation occurs in developing seeds and pod walls of Brassica napus L. subjected to ample or limited S nutrition. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2013; 27:2737-44. [PMID: 24214858 DOI: 10.1002/rcm.6738] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2013] [Revised: 08/28/2013] [Accepted: 09/13/2013] [Indexed: 05/11/2023]
Abstract
RATIONALE Seeds from different species actively assimilate sulphur (S) from sulphate. This has never been proved for Brassica napus L., a high S demanding plant, especially with regard to S limitation. The role of pod walls in the assimilation and allocation of S in well-fed and sulphate-limited conditions also needs to be clarified. METHODS Freshly harvested seeds and pod walls from plants well-supplied (HS) or limited with sulphate (LS) from the 'visible buds' stage were subjected to a nutrient solution containing (34)S-sulphate (10 atom% excess) for 24 h. The (34)S labelling of the sulphate and protein fractions was determined with an elemental analyser connected to a continuous flow isotope ratio mass spectrometer. The amino acid profiles of seeds and pod walls were also determined by ion-exchange chromatography. RESULTS The 24 h of (34)S-sulphate feeding treatment leads to an important production of proteins in HS and LS seeds, associated with a decrease in numerous amino acid contents. The treatment also leads to an incorporation of (34)S in seeds and pod walls proteins in both HS and LS conditions. The incorporation of (34)S in proteins was not different between HS and LS seeds, but was lower in LS than in HS pod walls, related to a higher incorporation in the other organic S compounds. CONCLUSIONS This study provides evidence that Brassica napus seeds and pod walls are able to assimilate sulphate in HS and LS conditions, and that the LS condition leads to enhancement of the sulphate assimilation capacity of pod walls, which may be of crucial importance for the allocation of S to developing seeds.
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Affiliation(s)
- Philippe D'Hooghe
- Normandie Univ, France; UCBN, UMR INRA-UCBN 950 Ecophysiologie Végétale, Agronomie & nutritions N.C.S., F-14032, Caen, France; INRA, UMR INRA-UCBN 950 Ecophysiologie Végétale, Agronomie & nutritions N.C.S., F-14032, Caen, France
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33
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Zuber H, Poignavent G, Le Signor C, Aimé D, Vieren E, Tadla C, Lugan R, Belghazi M, Labas V, Santoni AL, Wipf D, Buitink J, Avice JC, Salon C, Gallardo K. Legume adaptation to sulfur deficiency revealed by comparing nutrient allocation and seed traits in Medicago truncatula. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2013; 76:982-96. [PMID: 24118112 DOI: 10.1111/tpj.12350] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Revised: 09/27/2013] [Accepted: 10/08/2013] [Indexed: 05/11/2023]
Abstract
Reductions in sulfur dioxide emissions and the use of sulfur-free mineral fertilizers are decreasing soil sulfur levels and threaten the adequate fertilization of most crops. To provide knowledge regarding legume adaptation to sulfur restriction, we subjected Medicago truncatula, a model legume species, to sulfur deficiency at various developmental stages, and compared the yield, nutrient allocation and seed traits. This comparative analysis revealed that sulfur deficiency at the mid-vegetative stage decreased yield and altered the allocation of nitrogen and carbon to seeds, leading to reduced levels of major oligosaccharides in mature seeds, whose germination was dramatically affected. In contrast, during the reproductive period, sulfur deficiency had little influence on yield and nutrient allocation, but the seeds germinated slowly and were characterized by low levels of a biotinylated protein, a putative indicator of germination vigor that has not been previously related to sulfur nutrition. Significantly, plants deprived of sulfur at an intermediary stage (flowering) adapted well by remobilizing nutrients from source organs to seeds, ensuring adequate quantities of carbon and nitrogen in seeds. This efficient remobilization of photosynthates may be explained by vacuolar sulfate efflux to maintain leaf metabolism throughout reproductive growth, as suggested by transcript and metabolite profiling. The seeds from these plants, deprived of sulfur at the floral transition, contained normal levels of major oligosaccharides but their germination was delayed, consistent with low levels of sucrose and the glycolytic enzymes required to restart seed metabolism during imbibition. Overall, our findings provide an integrative view of the legume response to sulfur deficiency.
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Affiliation(s)
- Hélène Zuber
- Institut National de la Recherche Agronomique, UMR 1347 Agroécologie, BP 86510, F-21000, Dijon, France
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34
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Lee BR, Muneer S, Kim KY, Avice JC, Ourry A, Kim TH. S-deficiency responsive accumulation of amino acids is mainly due to hydrolysis of the previously synthesized proteins - not to de novo synthesis in Brassica napus. PHYSIOLOGIA PLANTARUM 2013; 147:369-80. [PMID: 22725131 DOI: 10.1111/j.1399-3054.2012.01669.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2012] [Revised: 05/22/2012] [Accepted: 05/31/2012] [Indexed: 05/04/2023]
Abstract
To characterize the mechanisms of amino acid accumulation under sulphur (S)-deficiency and its physiological significance in Brassica napus, stable isotopes (15) N and (34) S were employed. The plants were exposed for 9 days to S-deficient conditions (0.05 mM vs 1.5 mM sulphate). After 9 days of S-deficiency, leaf-osmotic potential and total chlorophyll content significantly decreased. S uptake decreased by 94%, whereas N uptake and biomass were not significantly changed. Using (15) N and (34) S labelling, de novo synthesis of amino acids and proteins derived from newly absorbed NO(3) (-) and SO(4) (2) (-) and the content of N and S in the previously synthesized amino acids and proteins were quantified. At the whole plant level, S-deficiency increased the pool of amino acids but resulted in strong decrease of incorporation of newly absorbed NO(3) (-) and SO(4) (2) (-) into amino acids by 22.2 and 76.6%, respectively, compared to the controls. Total amount of N and S incorporated into proteins also decreased by 28.8 and 62.1%, respectively. The levels of (14) N- and (32) S-proteins (previously synthesized proteins) strongly decreased, mainly in mature leaves. The data thus indicate that amino acid accumulation under short-term S-deficiency results from the degradation of previously synthesized proteins rather than from de novo synthesis.
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Affiliation(s)
- Bok-Rye Lee
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture & Life Science, Chonnam National University, Buk-Gwangju, P.O Box 205, Gwangju, 500-600, South Korea
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35
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D’Hooghe P, Escamez S, Trouverie J, Avice JC. Sulphur limitation provokes physiological and leaf proteome changes in oilseed rape that lead to perturbation of sulphur, carbon and oxidative metabolisms. BMC PLANT BIOLOGY 2013; 13:23. [PMID: 23391283 PMCID: PMC3620940 DOI: 10.1186/1471-2229-13-23] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2012] [Accepted: 01/23/2013] [Indexed: 05/04/2023]
Abstract
BACKGROUND The decline in industrial emissions of sulphur (S) has led to a sulphate depletion in soil resulting in an alteration of crop performance. In oilseed rape, an S deficiency dramatically reduced the seed yield and/or quality. Paradoxically, little is known about the impact of sulphate limitation on oilseed rape leaf metabolism, despite it being a key determinant of growth. In order to identify the metabolic processes involved in the oilseed rape response to S restriction, an analysis of the young leaf proteome combined with a physiological study was carried out at the vegetative stage. RESULTS S limitation does not significantly reduce the total shoot biomass but inhibits growth and photosynthesis of young leaves. This photosynthesis decline is not due to a decrease in chlorophyll content, which remains similar to Control. The increase in anthocyanins and H(2)O(2) content in young leaves of S-limited plants suggests that S restriction leads to an oxidative stress. Proteomic analysis at 35 d of S limitation also revealed the induction of 12-oxophitodienoate reductase and ACC synthase, respectively involved in jasmonate and ethylene biosynthesis, two phytohormones that could be implicated in oxidative stress. Proteins involved in photosynthesis and carbon metabolism were also modulated by S restriction. In particular, the decrease in plastocyanin and ferredoxin-NADP reductase suggests that H(2)O(2) accumulation is associated with perturbation of the photosynthetic electron transport chain. The accumulation of chloroplastic Cu-Zn SOD reinforces the idea that an oxidative stress probably occurs in the chloroplast. Proteomic results suggest that the maintenance of chlorophyll in S-limited conditions is related to an accumulation of Water Soluble Chlorophyll binding Proteins, involved in the protection of chlorophyll against ROS. The accumulation of the catalytic α-subunit of chloroplastic ATP synthase suggests that energy production is maintained. CONCLUSION S limitation leads to photosynthesis and carbon metabolism disturbances that could be responsible for the oxidative stress observed in the young leaves of oilseed rape. Despite this, induction of proteins involved in oxidative stress resistance and energy production shows that the leaf capacity to capture and use photosynthetic active radiations for ATP production remains efficient for as long as possible.
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Affiliation(s)
- Philippe D’Hooghe
- UMR INRA-UCBN 950 Écophysiologie Végétale, Agronomie & nutritions NCS, Institut de Biologie Fondamentale et Appliquée, Université de Caen Basse-Normandie, Esplanade de la Paix, CS 14032, Caen Cedex F-14032, France
| | - Sacha Escamez
- UMR INRA-UCBN 950 Écophysiologie Végétale, Agronomie & nutritions NCS, Institut de Biologie Fondamentale et Appliquée, Université de Caen Basse-Normandie, Esplanade de la Paix, CS 14032, Caen Cedex F-14032, France
| | - Jacques Trouverie
- UMR INRA-UCBN 950 Écophysiologie Végétale, Agronomie & nutritions NCS, Institut de Biologie Fondamentale et Appliquée, Université de Caen Basse-Normandie, Esplanade de la Paix, CS 14032, Caen Cedex F-14032, France
| | - Jean-Christophe Avice
- UMR INRA-UCBN 950 Écophysiologie Végétale, Agronomie & nutritions NCS, Institut de Biologie Fondamentale et Appliquée, Université de Caen Basse-Normandie, Esplanade de la Paix, CS 14032, Caen Cedex F-14032, France
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Iqbal N, Masood A, Khan MIR, Asgher M, Fatma M, Khan NA. Cross-talk between sulfur assimilation and ethylene signaling in plants. PLANT SIGNALING & BEHAVIOR 2013; 8:e22478. [PMID: 23104111 PMCID: PMC3745555 DOI: 10.4161/psb.22478] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2012] [Accepted: 10/08/2012] [Indexed: 05/06/2023]
Abstract
Sulfur (S) deficiency is prevailing all over the world and becoming an important issue for crop improvement through maximising its utilization efficiency by plants for sustainable agriculture. Its interaction with other regulatory molecules in plants is necessary to improve our understanding on its role under changing environment. Our knowledge on the influence of S on ethylene signaling is meagre although it is a constituent of cysteine (Cys) required for the synthesis of reduced glutathione (GSH) and S-adenosyl methionine (SAM), a precursor of ethylene biosynthesis. Thus, there may be an interaction between S assimilation, ethylene signaling and plant responses under optimal and stressful environmental conditions. The present review emphasizes that responses of plants to S involve ethylene action. This evaluation will provide an insight into the details of interactive role of S and ethylene signaling in regulating plant processes and prove profitable for developing sustainability under changing environmental conditions.
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Affiliation(s)
- Noushina Iqbal
- Department of Botany; Aligarh Muslim University; Aligarh, India
| | - Asim Masood
- Department of Botany; Aligarh Muslim University; Aligarh, India
| | | | - Mohd Asgher
- Department of Botany; Aligarh Muslim University; Aligarh, India
| | - Mehar Fatma
- Department of Botany; Aligarh Muslim University; Aligarh, India
| | - Nafees A. Khan
- Department of Botany; Aligarh Muslim University; Aligarh, India
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Steinfurth D, Zörb C, Braukmann F, Mühling KH. Time-dependent distribution of sulphur, sulphate and glutathione in wheat tissues and grain as affected by three sulphur fertilization levels and late S fertilization. JOURNAL OF PLANT PHYSIOLOGY 2012; 169:72-77. [PMID: 22070976 DOI: 10.1016/j.jplph.2011.08.012] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2011] [Revised: 08/15/2011] [Accepted: 08/17/2011] [Indexed: 05/31/2023]
Abstract
Sulphur (S) fertilization has beneficial effects on yield and protein composition of mature wheat kernels. However, to understand the impact of S fertilization on storage protein composition, synthesis of S-containing compounds and their distribution during grain development has to be examined. A pot experiment with Triticum aestivum cultivar Türkis under three S fertilization levels (0 g, 0.1 g und 0.2 g S per pot) and a late S fertilization level at ear emergence was carried out. Stalk and leaves, flag leaves, ears and kernels were harvested separately during grain development at ear emergence, milk ripeness and maturity, and analyzed for elemental S, sulphate, glutathione, and protein concentration. Sulphate is the major S compound in stalk, leaf and ears at the start of grain development, whereas glutathione is more important for synthesis of S-containing proteins in the grain. The discrepancy of S concentration comparing low and high S fertilization became obvious after milk ripeness. The N/S ratios in ears at ear emergence and milk ripeness reflected the later N/S ratio in mature grain. Late S fertilization increased sulphate concentrations in the flag leaf within a short period of about two weeks at ear emergence. Late S fertilization prevented S deficiency in late stages of wheat growth and further enabled equal concentrations of S, glutathione and protein in all wheat organs compared to an S application only at sowing.
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Affiliation(s)
- Dorothee Steinfurth
- Christian Albrechts University Kiel, Institute of Plant Nutrition and Soil Science, Hermann-Rodewald-Str. 2, D-24118 Kiel, Germany.
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