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Liang X, Yang JF, Huang ZH, Ma X, Yan Y, Qi SH. New Antibacterial Peptaibiotics against Plant and Fish Pathogens from the Deep-Sea-Derived Fungus Simplicillium obclavatum EIODSF 020. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:6402-6413. [PMID: 38491989 DOI: 10.1021/acs.jafc.4c00493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/18/2024]
Abstract
Bacterial diseases could severely harm agricultural production. To develop new antibacterial agents, the secondary metabolites of a deep-sea-derived fungus Simplicillium obclavatum EIODSF 020 with antibacterial activities against plant and fish pathogens were investigated by a bioassay-guided approach, which led to the isolation of 11 new peptaibiotics, simplicpeptaibs A-K (1-11). They contain 16-19 residues, including β-alanine, tyrosine, or tyrosine O-sulfate, that were rarely present in peptaibiotics. Their structures were elucidated by spectroscopic analyses (NMR, HRMS, HRMS2, and ECD) and Marfey's method. The primary and secondary structures of novel sulfated peptaibiotic 9 were reconfirmed by single-crystal X-ray diffraction analysis. Genome sequencing of S. obclavatum EIODSF 020 allowed the detection of a gene cluster encoding two individual NRPSs (totally containing 19 modules) that was closely related to simplicpeptaib biosynthesis. Antibacterial investigations of 1-11 together with the previously isolated linear and cyclic peptides from this strain suggested the antibacterial property of this fungus was attributed to the peptaibiotics and cyclic lipopeptides. Among them, compounds 4, 6, 7, and 9 showed significant activity against the tobacco pathogen Ralstonia solanacearum or tilapia pathogens Streptococcus iniae and Streptococcus agalactiae. The antibacterial activity of 6 against R. solanacearum could be enhanced by the addition of 1% NaCl. The structure-bioactivity relationship of simplicpeptaibs was discussed.
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Affiliation(s)
- Xiao Liang
- CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China
| | - Jia-Fan Yang
- CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhong-Hui Huang
- CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China
| | - Xuan Ma
- CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China
| | - Yan Yan
- CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China
| | - Shu-Hua Qi
- CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China
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Hossain MM, Sultana F, Yesmin L, Rubayet MT, Abdullah HM, Siddique SS, Bhuiyan MAB, Yamanaka N. Understanding Phakopsora pachyrhizi in soybean: comprehensive insights, threats, and interventions from the Asian perspective. Front Microbiol 2024; 14:1304205. [PMID: 38274768 PMCID: PMC10808435 DOI: 10.3389/fmicb.2023.1304205] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Accepted: 12/05/2023] [Indexed: 01/27/2024] Open
Abstract
Soybean (Glycine max L.) is an important crop in Asia, accounting for 17% of global soybean cultivation. However, this crop faces formidable challenges from the devastating foliar disease, Asian Soybean Rust (ASR), caused by Phakopsora pachyrhizi, a biotrophic fungus with a broad host range, causing substantial yield losses (10-100%) in Asia. This comprehensive review consolidates knowledge on ASR, encompassing its impact, historical perspectives, genetic diversity, epidemic drivers, early detection, risk assessment, and sustainable management strategies of ASR in the region. ASR has expanded globally from Asia, reaching Africa and Americas, driven by wind-dispersed urediniospores. Genetic diversity studies reveal the complexity of P. pachyrhizi, with distinct populations exhibiting varying virulence patterns. Factors affecting ASR epidemics in Asia include host susceptibility, landscape connectivity, climate, and environmental conditions. Understanding the interplay of these factors is essential for early intervention and control of ASR in soybean fields. Effectively managing ASR can exploit the utilization of diverse intervention strategies, encompassing disease forecasting, automated early detection, disease resistance, fungicide application, and biological control. A pivotal aspect of successful, sustainable disease management lies in reducing the ASR pathogen virulence and preventing it from developing fungicide resistance, while the highpoint of effectiveness in disease control is attained through a synergistic approach, integrating various strategies. In summary, this comprehensive review provides insights into multifaceted approaches that contribute to the development of sustainable and economically impactful soybean production in the face of the persistent threat of ASR in Asia.
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Affiliation(s)
- Md. Motaher Hossain
- Department of Plant Pathology, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh
| | - Farjana Sultana
- College of Agricultural Sciences, International University of Business Agriculture and Technology, Dhaka, Bangladesh
| | - Laboni Yesmin
- Department of Plant Pathology, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh
| | - Md. Tanbir Rubayet
- Department of Plant Pathology, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh
| | - Hasan M. Abdullah
- Department of Agroforestry and Environment, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh
| | - Shaikh Sharmin Siddique
- Department of Plant Pathology, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh
| | - Md. Abdullahil Baki Bhuiyan
- Department of Plant Pathology, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh
| | - Naoki Yamanaka
- Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Ibaraki, Japan
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Lin T, Tang J, Li S, Li S, Han S, Liu Y, Yang C, Chen G, Chen L, Zhu T. Drought stress-mediated differences in phyllosphere microbiome and associated pathogen resistance between male and female poplars. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023; 115:1100-1113. [PMID: 37177875 DOI: 10.1111/tpj.16283] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2022] [Revised: 05/04/2023] [Accepted: 05/10/2023] [Indexed: 05/15/2023]
Abstract
Phyllosphere-associated microbes play a crucial role in plant-pathogen interactions while their composition and diversity are strongly influenced by drought stress. As dioecious plant species exhibited secondary dimorphism between the two sexes in response to drought stress, whether such difference will lead to sex-specific differences in phyllosphere microbiome and associated pathogen resistance between male and female conspecifics is still unknown. In this study, we subjected female and male full siblings of a dioecious poplar species to a short period of drought treatment followed by artificial infection of a leaf pathogenic fungus. Our results showed that male plants grew better than females with or without drought stress. Female control plants had more leaf lesion area than males after pathogen infection, whereas drought stress reversed such a difference. Further correlation and in vitro toxicity tests suggested that drought-mediated sexual differences in pathogen resistance between the two plant sexes could be attributed to the shifts in structure and function of phyllosphere-associated microbiome rather than the amount of leaf main defensive chemicals contained in plant leaves. Supportively, the microbiome analysis through high-throughput sequencing indicated that female phyllosphere enriched a higher abundance of ecologically beneficial microbes that serve as biological plant protectants, while males harbored abundant phytopathogens under drought-stressed conditions. The results could provide potential implications for the selection of suitable poplar sex to plants in drought or semi-drought habitats.
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Affiliation(s)
- Tiantian Lin
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
- Ministry of Education Key Laboratory for Transboundary Ecosecurity of Southwest China and Centre of Invasion Biology, Institute of Biodiversity, Yunnan University, 650504, Kunming, China
| | - Jiayao Tang
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
| | - Shuying Li
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
| | - Shujiang Li
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
| | - Shan Han
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
| | - Yinggao Liu
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
| | - Chunlin Yang
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
| | - Gang Chen
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
| | - Lianghua Chen
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
| | - Tianhui Zhu
- Key Laboratory of National Forestry & Grassland Administration on Forest Resources Conservation and Ecological Safety in the Upper Reaches of the Yangtze River, Key Laboratory of Forest Protection of Sichuan Education Department, College of Forestry, Sichuan Agricultural University, 611130, Chengdu, China
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Twizeyimana M, Hammer PE, Gachango E, Craig K, Espejo B, Biggs MB, Kremer J, Ingham DJ. Diverse environmental bacteria displaying activity against Phakopsora pachyrhizi, the cause of soybean rust. FRONTIERS IN PLANT SCIENCE 2023; 14:1080116. [PMID: 36818841 PMCID: PMC9932200 DOI: 10.3389/fpls.2023.1080116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Accepted: 01/04/2023] [Indexed: 06/18/2023]
Abstract
The management of soybean rust (SBR) caused by the obligate fungus Phakopsora pachyrhizi mostly relies on the use of synthetic fungicides, especially in areas where the disease inflicts serious yield losses. The reliance on synthetic fungicides to manage this disease has resulted in resistance of P. pachyrhizi populations to most fungicides. In this study, bacteria isolated from diverse environments were evaluated for their biocontrol potential against P. pachyrhizi using soybean detached-leaf method and on-plant in the growth chamber, greenhouse, and field. Among 998 bacterial isolates evaluated using the detached-leaf method; 58% were isolated from plant-related materials, 27% from soil, 10% from insects, and 5% from other environments. Of the isolates screened, 73 were active (they had ⪖ 75% rust reduction) with an active rate of 7.3%. From the active isolates, 65 isolates were re-tested on-plant in the growth chamber for activity confirmation. In the confirmation test, 49 bacteria isolated from plant-related materials maintained their activity with a confirmation rate of 75%. The majority of bacteria with confirmed activity belonged to the taxonomic classes Bacilli and Gammaproteobacteria (70%). Active isolates were prioritized for greenhouse and field testing based on activity in the initial screen and confirmation test. Six bacterial isolates AFS000009 (Pseudomonas_E chlororaphis), AFS032321 (Bacillus subtilis), AFS042929 (Bacillus_C megaterium), AFS065981 (Bacillus_X simplex_A), AFS090698 (Bacillus_A thuringiensis_S), and AFS097295 (Bacillus_A toyonensis) were selected from those bacteria that maintained activity in the confirmation test and were evaluated in the greenhouse, and five among them were evaluated in the field. From the Alabama field evaluation, all bacterial isolates reduced rust infection as well as azoxystrobin (Quadris® at 0.3 L/ha) used as the fungicide control (P > 0.05). Moreover, the scanning electron micrographs demonstrated evidence of antagonistic activity of AFS000009 and AFS032321 against P. pachyrhizi urediniospores. Bacterial isolates that consistently showed activity comparable to that of azoxystrobin can be improved through fermentation and formulation optimization, developed, and deployed. These bacteria strains would provide a valuable alternative to the synthetic fungicides and could play a useful role in integrated disease management programs for this disease.
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Yoshida K, Ueno T, Koito K, Hu D, Yamaguchi A. A Comparative Study on Fungal Diversity in Organic and Conventionally Cultivated Lemons During Accelerated Storage. Curr Microbiol 2023; 80:69. [PMID: 36609598 DOI: 10.1007/s00284-022-03164-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Accepted: 12/23/2022] [Indexed: 01/08/2023]
Abstract
There has been a growing interest in organic farming as a countermeasure to the environmental burden caused by chemical pesticides. We analyzed and compared the fungal diversity of lemon fruits from organic and conventional cultivation by automated rRNA intergenic spacer analysis (ARISA), accompanied by isolation of cultured colonies and metagenomic analysis. Lemon peels were cut out and subjected to the analyses at purchase and after accelerated storage at 28 °C. The organic lemons did not decay even after 14 weeks, while most of the conventional lemons did decay. The fungal colony counts were not significantly different, although the number of fungal species together with the Shannon index, considering the abundance of each species, clearly showed more diversity in organic lemons than in conventional lemons (p = 0.011). Fusarium sp. (putative F. solani) accounted for as much as 90% of the relative abundance in the decayed conventional lemons. Metagenomic analysis also supported the lack of fungal diversity in conventional lemons. These results may suggest that organic cultivation maintains the diversity of native fungal flora in lemon fruit and could contribute to preventing decay during ambient storage.
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Affiliation(s)
- Kuniko Yoshida
- Department of Food Science and Human Wellness, Rakuno Gakuen University, Midorimachi 582, Bunkyodai, Ebetsu-Shi, Hokkaido, 069-8501, Japan
| | - Takeshi Ueno
- Department of Food Science and Human Wellness, Rakuno Gakuen University, Midorimachi 582, Bunkyodai, Ebetsu-Shi, Hokkaido, 069-8501, Japan
| | - Kentaro Koito
- Department of Sustainable Agriculture, Rakuno Gakuen University, Midorimachi 582, Bunkyodai, Ebetsu-Shi, Hokkaido, 069-8501, Japan
| | - Dagula Hu
- Department of Food Science and Human Wellness, Rakuno Gakuen University, Midorimachi 582, Bunkyodai, Ebetsu-Shi, Hokkaido, 069-8501, Japan
| | - Akihiro Yamaguchi
- Department of Food Science and Human Wellness, Rakuno Gakuen University, Midorimachi 582, Bunkyodai, Ebetsu-Shi, Hokkaido, 069-8501, Japan.
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Antifungal Activity and Biocontrol Potential of Simplicillium lamellicola JC-1 against Multiple Fungal Pathogens of Oilseed Rape. J Fungi (Basel) 2022; 9:jof9010057. [PMID: 36675878 PMCID: PMC9860836 DOI: 10.3390/jof9010057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Revised: 12/26/2022] [Accepted: 12/27/2022] [Indexed: 12/31/2022] Open
Abstract
A fungal strain (JC-1) of Simplicillium was isolated from a pod of oilseed rape (Brassica napus) infested with the blackleg pathogen Leptosphaeria biglobosa. This study was done to clarify its taxonomic identity using morphological and molecular approaches, to characterize its antifungal activity through bioassays and genome-based identification of antifungal metabolites, and to determine its efficacy in inducing systemic resistance (ISR) in oilseed rape. The results showed that JC-1 belongs to Simplicillium lamellicola. It displayed a strong antagonistic relationship with L. biglobosa, Botrytis cinerea (gray mold) and Sclerotinia sclerotiorum (stem rot). The cultural filtrates of JC-1 showed a high efficacy in suppressing infection by S. sclerotiorum on detached leaves of oilseed rape. Genome analysis indicated that JC-1 has the capability of producing multiple antifungal metabolites, including aureobasidin A1, squalestatin S1 and verlamelin. Inoculation of JC-1 on seeds of oilseed rape caused a suppressive effect on infection by L. biglobosa on the cotyledons of the resulting seedlings, suggesting that JC-1 can trigger ISR. Endophytic growth, accumulation of anthocyanins, up-regulated expression of CHI (for chalcone isomerase) and PR1 (for pathogenesis-related protein 1), and down-regulated expression of NECD3 (for 9-cis-epoxycarotenoid dioxygenase) were detected to be associated with the ISR. This study provided new insights into the biocontrol potential and modes of action of S. lamellicola.
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Si B, Wang H, Bai J, Zhang Y, Cao Y. Evaluating the Utility of Simplicillium lanosoniveum, a Hyperparasitic Fungus of Puccinia graminis f. sp. tritici, as a Biological Control Agent against Wheat Stem Rust. Pathogens 2022; 12:pathogens12010022. [PMID: 36678370 PMCID: PMC9862854 DOI: 10.3390/pathogens12010022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Revised: 12/16/2022] [Accepted: 12/19/2022] [Indexed: 12/28/2022] Open
Abstract
Wheat stem rust is one of the wheat diseases caused by Puccinia graminis Pers. f. sp. tritici (Pgt). This disease has been responsible for major losses to wheat production worldwide. Currently used methods for controlling this disease include fungicides, the breeding of stem rust-resistant cultivars, and preventive agricultural measures. However, the excessive use of fungicides can have various deleterious effects on the environment. A hyperparasitic fungus with white mycelia and oval conidia, Simplicillium lanosoniveum, was isolated from the urediniospores of Pgt. When Pgt-infected wheat leaves were inoculation with isolates of S. lanosoniveum, it was found that S. lanosoniveum inoculation inhibited the production and germination of urediniospores, suggesting that S. lanosoniveum could inhibit the growth and spread of Pgt. Scanning electron microscopy revealed that S. lanosoniveum could inactivate the urediniospores by inducing structural damage. Overall, findings indicate that S. lanosoniveum might provide an effective biological agent for the control of Pgt.
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Affiliation(s)
- Binbin Si
- College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, China
- College of Biological Science and Engineering, North Minzu University, Yinchuan 750021, China
| | - Hui Wang
- College of Biological Science and Engineering, North Minzu University, Yinchuan 750021, China
| | - Jiaming Bai
- College of Biological Science and Engineering, North Minzu University, Yinchuan 750021, China
| | - Yuzhen Zhang
- College of Biological Science and Engineering, North Minzu University, Yinchuan 750021, China
| | - Yuanyin Cao
- College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, China
- Correspondence: ; Tel.: +86-136-0400-0358
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Enzyme activity of three mycoparasite isolates and their effect on Coffee Leaf Rust (Hemileia vastatrix Berk. & Br.). Symbiosis 2022. [DOI: 10.1007/s13199-022-00885-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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New Approaches to Manage Asian Soybean Rust (Phakopsora pachyrhizi) Using Trichoderma spp. or Their Antifungal Secondary Metabolites. Metabolites 2022; 12:metabo12060507. [PMID: 35736440 PMCID: PMC9227527 DOI: 10.3390/metabo12060507] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2022] [Revised: 05/10/2022] [Accepted: 05/26/2022] [Indexed: 01/27/2023] Open
Abstract
Attempts have been made to determine the in vitro and in planta suppressive potential of particular Trichoderma strains (T16 and T23) and their secondary metabolites (SMs) against Asian soybean rust (ASR) incited by Phakopsora pachyrhizi. Aside from the previously identified SMs 6-pentyl-α-pyrone (6PAP) and viridiofungin A (VFA), the chemical structures of harzianic acid (HA), iso-harzianic acid (iso-HA), and harzianolide (HZL) were characterized in this study. Our results indicate that exposure of urediospores to 200 ppm 6PAP completely inhibits germination. A slightly higher dosage (250 ppm) of HZL and VFA reduces germination by 53.7% and 44%, respectively. Germ tube elongation seems more sensitive to 6PAP than urediospore germination. On detached leaves, application of conidia of T16 and T23 results in 81.4% and 74.3% protection, respectively. Likewise, 200 ppm 6PAP recorded the highest ASR suppression (98%), followed by HZL (78%) and HA (69%). Treatment of undetached leaves with 6PAP, HA, or HZL reduces ASR severity by 84.2%, 65.8%, and 50.4%, respectively. Disease reduction on the next, untreated trifoliate by T23 (53%), T16 (41%), HZL (42%), and 6PAP (32%) suggests a translocation or systemic activity of the SMs and their producers. To our knowledge, this study provides the first proof for controlling ASR using antifungal SMs of Trichoderma. Our findings strongly recommend the integration of these innovative metabolites, particularly 6PAP and/or their producers in ASR management strategies.
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Sbaraini N, Tomazett MV, Penteriche AB, Gonçales RA, Camargo MDS, Bailão AM, Borges CL, Schrank A, Soares CMDA, Staats CC. An efficient Agrobacterium tumefaciens-mediated transformation method for Simplicillium subtropicum (Hypocreales: Cordycipitaceae). Genet Mol Biol 2021; 44:e20210073. [PMID: 34606563 PMCID: PMC8489804 DOI: 10.1590/1678-4685-gmb-2021-0073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2021] [Accepted: 06/15/2021] [Indexed: 11/22/2022] Open
Abstract
Filamentous fungi are the organisms of choice for most industrial biotechnology. Some species can produce a variety of secondary metabolites and enzymes of commercial interest, and the production of valuable molecules has been enhanced through different molecular tools. Methods for genetic manipulation and transformation have been essential for the optimization of these organisms. The genus Simplicillium has attracted increased attention given several potential biotechnological applications. The Simplicillium genus harbors several entomopathogenic species and some isolates have been explored for bioremediation of heavy metal contaminants. Furthermore, the myriad of secondary metabolites isolated from Simplicillium spp. render these organisms as ideal targets for deep exploration and further biotechnological mining possibilities. However, the lack of molecular tools hampered the exploration of this genus. Thus, an Agrobacterium tumefaciens-mediated transformation method was established for Simplicillium subtropicum, employing the far-red fluorescent protein TURBOFP635/Katushka, as a visual marker, and the selection marker SUR gene, that confers resistance to chlorimuron ethyl. Notably, one round of transformation using the established method yielded almost 400 chlorimuron resistant isolates. Furthermore, these transformants displayed mitotic stability for, at least, five generations. We anticipate that this method can be useful for deep molecular exploration and improvement of strains in the Simplicillium genus.
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Affiliation(s)
- Nicolau Sbaraini
- Universidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Programa de Pós-graduação em Biologia Celular e Molecular, Porto Alegre, RS, Brazil.,Rede Avançada em Biologia Computacional (RABICÓ), Petrópolis, RJ, Brazil
| | - Mariana Vieira Tomazett
- Universidade Federal de Goiás, Instituto de Ciências Biológicas, Laboratório de Biologia Molecular, Goiânia, GO, Brazil
| | - Augusto Bartz Penteriche
- Universidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Programa de Pós-graduação em Biologia Celular e Molecular, Porto Alegre, RS, Brazil
| | - Relber Aguiar Gonçales
- University of Minho, School of Medicine, Life and Health Sciences Research Institute (ICVS), Braga, Portugal.,ICVS/3B's - PT Government Associate Laboratory, Braga/Guimarães, Portugal
| | - Matheus da Silva Camargo
- Universidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Programa de Pós-graduação em Biologia Celular e Molecular, Porto Alegre, RS, Brazil
| | - Alexandre Melo Bailão
- Universidade Federal de Goiás, Instituto de Ciências Biológicas, Laboratório de Biologia Molecular, Goiânia, GO, Brazil
| | - Clayton Luiz Borges
- Universidade Federal de Goiás, Instituto de Ciências Biológicas, Laboratório de Biologia Molecular, Goiânia, GO, Brazil
| | - Augusto Schrank
- Universidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Programa de Pós-graduação em Biologia Celular e Molecular, Porto Alegre, RS, Brazil.,Rede Avançada em Biologia Computacional (RABICÓ), Petrópolis, RJ, Brazil
| | - Célia Maria de Almeida Soares
- Universidade Federal de Goiás, Instituto de Ciências Biológicas, Laboratório de Biologia Molecular, Goiânia, GO, Brazil
| | - Charley Christian Staats
- Universidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Programa de Pós-graduação em Biologia Celular e Molecular, Porto Alegre, RS, Brazil.,Rede Avançada em Biologia Computacional (RABICÓ), Petrópolis, RJ, Brazil
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11
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Chen WH, Han YF, Liang JD, Liang ZQ. Taxonomic and phylogenetic characterizations reveal four new species of Simplicillium (Cordycipitaceae, Hypocreales) from Guizhou, China. Sci Rep 2021; 11:15300. [PMID: 34316013 PMCID: PMC8316311 DOI: 10.1038/s41598-021-94893-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Accepted: 07/12/2021] [Indexed: 11/11/2022] Open
Abstract
Simplicillium species are commonly found from soil, seawater, rock surface, decayed wood, air and as symbiotic, endophytic, entomopathogenic and mycoparasitic fungi. Minority insect-associated species was reported. Simplicillium coccinellidae, S. hymenopterorum, S. neolepidopterorum and S. scarabaeoidea were introduced as the newly insect-associated species. The phylogenetic analyses of two combined datasets (LSU + RPB1 + TEF and SSU + ITS + LSU) revealed that S. coccinellidae and S. hymenopterorum were both nested in an independent clade. S. neolepidopterorum and S. scarabaeoidea have a close relationship with S. formicidae and S. lepidopterorum, respectively. S. neolepidopterorum can be easily distinguished from S. formicidae by ellipsoidal to cylindrical, solitary conidia which occasionally gather in short imbricate chains. S. scarabaeoidea could be easily distinguished from S. lepodopterorum by having longer phialides and larger conidia. Based on the morphological and phylogenetic conclusion, we determine the four newly generated isolates as new species of Simplicillium and a new combination is proposed in the genus Leptobacillium.
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Affiliation(s)
- Wan-Hao Chen
- Basic Medical School, Guizhou University of Traditional Chinese Medicine, Guiyang, 550025, Guizhou, People's Republic of China
| | - Yan-Feng Han
- Department of Ecology, Institute of Fungus Resources, College of Life Sciences, Guizhou University, Guiyang, 550025, Guizhou, People's Republic of China.
| | - Jian-Dong Liang
- Basic Medical School, Guizhou University of Traditional Chinese Medicine, Guiyang, 550025, Guizhou, People's Republic of China
| | - Zong-Qi Liang
- Department of Ecology, Institute of Fungus Resources, College of Life Sciences, Guizhou University, Guiyang, 550025, Guizhou, People's Republic of China
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12
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Varrella S, Barone G, Tangherlini M, Rastelli E, Dell’Anno A, Corinaldesi C. Diversity, Ecological Role and Biotechnological Potential of Antarctic Marine Fungi. J Fungi (Basel) 2021; 7:jof7050391. [PMID: 34067750 PMCID: PMC8157204 DOI: 10.3390/jof7050391] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Revised: 05/07/2021] [Accepted: 05/13/2021] [Indexed: 11/28/2022] Open
Abstract
The Antarctic Ocean is one of the most remote and inaccessible environments on our planet and hosts potentially high biodiversity, being largely unexplored and undescribed. Fungi have key functions and unique physiological and morphological adaptations even in extreme conditions, from shallow habitats to deep-sea sediments. Here, we summarized information on diversity, the ecological role, and biotechnological potential of marine fungi in the coldest biome on Earth. This review also discloses the importance of boosting research on Antarctic fungi as hidden treasures of biodiversity and bioactive molecules to better understand their role in marine ecosystem functioning and their applications in different biotechnological fields.
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Affiliation(s)
- Stefano Varrella
- Department of Materials, Environmental Sciences and Urban Planning, Polytechnic University of Marche, Via Brecce Bianche, 60131 Ancona, Italy
- Correspondence: (S.V.); (C.C.)
| | - Giulio Barone
- Institute for Biological Resources and Marine Biotechnologies, National Research Council (IRBIM-CNR), Largo Fiera della Pesca, 60125 Ancona, Italy;
| | - Michael Tangherlini
- Department of Research Infrastructures for Marine Biological Resources, Stazione Zoologica “Anton Dohrn”, Fano Marine Centre, Viale Adriatico 1-N, 61032 Fano, Italy;
| | - Eugenio Rastelli
- Department of Marine Biotechnology, Stazione Zoologica “Anton Dohrn”, Fano Marine Centre, Viale Adriatico 1-N, 61032 Fano, Italy;
| | - Antonio Dell’Anno
- Department of Life and Environmental Sciences, Polytechnic University of Marche, Via Brecce Bianche, 60131 Ancona, Italy;
| | - Cinzia Corinaldesi
- Department of Materials, Environmental Sciences and Urban Planning, Polytechnic University of Marche, Via Brecce Bianche, 60131 Ancona, Italy
- Correspondence: (S.V.); (C.C.)
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13
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Costa D, Tavares RM, Baptista P, Lino-Neto T. Cork Oak Endophytic Fungi as Potential Biocontrol Agents against Biscogniauxia mediterranea and Diplodia corticola. J Fungi (Basel) 2020; 6:E287. [PMID: 33202643 PMCID: PMC7711870 DOI: 10.3390/jof6040287] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Revised: 11/10/2020] [Accepted: 11/12/2020] [Indexed: 01/06/2023] Open
Abstract
An increase in cork oak diseases caused by Biscogniauxia mediterranea and Diplodia corticola has been reported in the last decade. Due to the high socio-economic and ecologic importance of this plant species in the Mediterranean Basin, the search for preventive or treatment measures to control these diseases is an urgent need. Fungal endophytes were recovered from cork oak trees with different disease severity levels, using culture-dependent methods. The results showed a higher number of potential pathogens than beneficial fungi such as cork oak endophytes, even in healthy plants. The antagonist potential of a selection of eight cork oak fungal endophytes was tested against B. mediterranea and D. corticola by dual-plate assays. The tested endophytes were more efficient in inhibiting D. corticola than B. mediterranea growth, but Simplicillium aogashimaense, Fimetariella rabenhorstii, Chaetomium sp. and Alternaria alternata revealed a high potential to inhibit the growth of both. Simplicillium aogashimaense caused macroscopic and microscopic mycelial/hyphal deformations and presented promising results in controlling both phytopathogens' growth in vitro. The evaluation of the antagonistic potential of non-volatile and volatile compounds also revealed that A. alternata compounds could be further explored for inhibiting both pathogens. These findings provide valuable knowledge that can be further explored in in vivo assays to find a suitable biocontrol agent for these cork oak diseases.
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Affiliation(s)
- Daniela Costa
- BioSystems & Integrative Sciences Institute (BioISI), Plant Functional Biology Centre, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal; (D.C.); (R.M.T.)
| | - Rui M. Tavares
- BioSystems & Integrative Sciences Institute (BioISI), Plant Functional Biology Centre, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal; (D.C.); (R.M.T.)
| | - Paula Baptista
- Centro de Investigação de Montanha (CIMO), Instituto Politécnico de Bragança, Campus de Santa Apolónia, 5300-253 Bragança, Portugal;
| | - Teresa Lino-Neto
- BioSystems & Integrative Sciences Institute (BioISI), Plant Functional Biology Centre, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal; (D.C.); (R.M.T.)
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14
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Effect of Substrate Characteristics on the Growth and Sporulation of Two Biocontrol Microorganisms during Solid State Cultivation. FERMENTATION 2020. [DOI: 10.3390/fermentation6030069] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Biocontrol agents are a group of naturally occurring organisms capable of interrupting the lifespan and suppressing the propagation of disease organisms. The use of biocontrol agents offers an environment-friendly and sustainable solution to the synthetic agrochemicals. In this study, we investigated parboiled rice and millets as substrates for spore production of two model biocontrol microorganisms (Bacillus pumilus and Streptomyces griseus) under solid state cultivation (SSC) conditions. The effects of cultivation parameters such as initial moisture content, water activity, and cultivation time on microbial growth and spore production were studied. Furthermore, texture profile analysis was performed to test the stress and strain curve and the hardness and stickiness of the substrates. The greatest spore production occurred at 50% moisture content with millets as a substrate, yielding a count of 1.34 × 108 spores/g-wet-substrate enumerated with plate count analysis and 1.70 × 108 events/g-wet-substrate using flow cytometry analysis. Substrate texture profile was highly correlative to the initial moisture content and substrate type and all proved to be essential process variables in controlling the bacterial growth and sporulation during SSC processes.
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15
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Draft Genome Sequence of Simplicillium aogashimaense 72-15.1, a Putative Endophyte of Brachiaria brizantha. Microbiol Resour Announc 2020; 9:9/27/e00366-20. [PMID: 32616631 PMCID: PMC7330233 DOI: 10.1128/mra.00366-20] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Abstract
Here, we report a 29-Mb draft genome sequence of strain 72-15.1 of Simplicillium aogashimaense (Cordycipitaceae, Hypocreales). Strain 72-15.1 was a unique fungal isolate obtained from asymptomatic tillers of the tropical grass Brachiaria brizantha. Here, we report a 29-Mb draft genome sequence of strain 72-15.1 of Simplicillium aogashimaense (Cordycipitaceae, Hypocreales). Strain 72-15.1 was a unique fungal isolate obtained from asymptomatic tillers of the tropical grass Brachiaria brizantha.
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16
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Wang N, Fan X, Zhang S, Liu B, He M, Chen X, Tang C, Kang Z, Wang X. Identification of a Hyperparasitic Simplicillium obclavatum Strain Affecting the Infection Dynamics of Puccinia striiformis f. sp. tritici on Wheat. Front Microbiol 2020; 11:1277. [PMID: 32754121 PMCID: PMC7340151 DOI: 10.3389/fmicb.2020.01277] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2020] [Accepted: 05/19/2020] [Indexed: 11/13/2022] Open
Abstract
Wheat stripe rust, caused by Puccinia striiformis f. sp. tritici (Pst), is one of the most serious threats to wheat production worldwide. Changes of Pst virulence may circumvent resistance in wheat varieties, and application of fungicides may cause environmental problems. Parasites of Pst can be used to develop biological agents for environmentally friendly control of this fungal disease. Here, we report a hyperparasitic fungus isolated from Pst and identified it as Simplicillium obclavatum through molecular and morphological characterizations. We demonstrated that inoculation of Pst-infected wheat leaves with S. obclavatum reduced the production and germination rate of Pst urediniospores. Therefore, S. obclavatum has the potential to be developed into a biological control agent for managing wheat stripe rust.
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Affiliation(s)
- Ning Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Shaanxi, China
| | - Xin Fan
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Shaanxi, China
| | - Shan Zhang
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Shaanxi, China
| | - Bo Liu
- State Key Laboratory for Biology of Plant Disease and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Mengying He
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Shaanxi, China
| | - Xianming Chen
- USDA-ARS, Wheat Genetics, Physiology, Quality, and Disease Research Unit and Department of Plant Pathology, Washington State University, Pullman, WA, United States
| | - Chunlei Tang
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Shaanxi, China
| | - Zhensheng Kang
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Shaanxi, China
| | - Xiaojie Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Shaanxi, China
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17
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Wei DP, Wanasinghe DN, Hyde KD, Mortimer PE, Xu J, Xiao YP, Bhunjun CS, To-Anun C. The genus Simplicillium. MycoKeys 2019; 60:69-92. [PMID: 31798310 PMCID: PMC6879665 DOI: 10.3897/mycokeys.60.38040] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2019] [Accepted: 09/09/2019] [Indexed: 01/31/2023] Open
Abstract
Simplicillium species have a wide host range and an extensive distribution. Some species are associated with rusts, as well as other plant pathogenic fungi and play an important role in biological control. In this study, two specimens of Simplicillium were collected from Chiang Mai Province, Thailand. Simplicilliumformicae sp. nov. was isolated from an infected ant and S.lanosoniveum from Ophiocordycepsunilateralis which is a new host record. Species were initially identified using ITS gene sequences and confirmed using morphology coupled with phylogenetic analyses of a combined nrLSU, nrSSU, TEF and RPB1 dataset. Simplicilliumformicae differs from other species in the genus by the presence of flask-shaped synnemata and phialides with intercalary nodes. Simplicilliumlanosoniveum resembles other collections of the species by its completely solitary, tapering phialides and globose to ellipsoidal conidia which adhere in a slimly head. A key to species of Simplicillium is also provided.
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Affiliation(s)
- De-Ping Wei
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, 50200, Thailand.,Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.,Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China.,Mushroom Research Foundation, 128 M.3 Ban Pa Deng T. Pa Pae, A. Mae Taeng, Chiang Mai 50150, Thailand
| | - Dhanushka N Wanasinghe
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China.,World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, China
| | - Kevin D Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.,Mushroom Research Foundation, 128 M.3 Ban Pa Deng T. Pa Pae, A. Mae Taeng, Chiang Mai 50150, Thailand
| | - Peter E Mortimer
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
| | - Jianchu Xu
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China.,World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, China
| | - Yuan-Pin Xiao
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.,Engineering Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang, Guizhou Province, 550025, China.,School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Chitrabhanu S Bhunjun
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.,School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Chaiwat To-Anun
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, 50200, Thailand
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18
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Chen WH, Liu C, Han YF, Liang JD, Tian WY, Liang ZQ. Three novel insect-associated species of Simplicillium (Cordycipitaceae, Hypocreales) from Southwest China. MycoKeys 2019; 58:83-102. [PMID: 31592222 PMCID: PMC6775174 DOI: 10.3897/mycokeys.58.37176] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2019] [Accepted: 08/24/2019] [Indexed: 02/08/2023] Open
Abstract
In this paper, we introduce three new species of Simplicillium, viz. S. cicadellidae, S. formicidae and S. lepidopterorum, which were isolated from an infected leafhopper, ant and carpenterworm, respectively. Morphological comparisons and phylogenetic analyses based on multigene datasets (LSU+RPB1+RPB2+TEF and ITS+LSU) support the establishment of the three new species. Simplicillium cicadellidae was distinguished from other species in morphological characteristics by having smaller phialides and ellipsoidal conidia, and lacking octahedral crystals. The reverse of colonies were yellowish (#FFBF00), especially in the middle, and radially sulcate. Simplicillium formicidae was morphologically distinguished from other by having longer phialides and filiform to fusoid conidia, and by lacking octahedral crystals. Simplicillium lepidopterorum was morphologically distinguished from other species by having smaller, ellipsoidal to fusiform conidia, and by lacking octahedral crystals. The reverse of the colony was pale white. The three new species are likely to be nourished by plant to animal (especially insect) nutrients based on the evolutionary pattern of the Hypocreales, and they are described herein as being clearly distinct from other species in Simplicillium.
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Affiliation(s)
- Wan-Hao Chen
- Department of Microbiology, Basic Medical School, Guizhou University of Traditional Chinese Medicine, Guiyang 550025, Guizhou, China
| | - Chang Liu
- School of Pharmacy, Guizhou University of Traditional Chinese Medicine, Guiyang 550025, Guizhou, China
| | - Yan-Feng Han
- Institute of Fungus Resources, Department of Ecology, College of Life Sciences, Guizhou University, Guiyang 550025, Guizhou, China
| | - Jian-Dong Liang
- Department of Microbiology, Basic Medical School, Guizhou University of Traditional Chinese Medicine, Guiyang 550025, Guizhou, China
| | - Wei-Yi Tian
- Department of Microbiology, Basic Medical School, Guizhou University of Traditional Chinese Medicine, Guiyang 550025, Guizhou, China
| | - Zong-Qi Liang
- Institute of Fungus Resources, Department of Ecology, College of Life Sciences, Guizhou University, Guiyang 550025, Guizhou, China
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19
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Twizeyimana M, Hartman GL. Effect of Selected Biopesticides in Reducing Soybean Rust ( Phakopsora pachyrhizi) Development. PLANT DISEASE 2019; 103:2460-2466. [PMID: 31322492 DOI: 10.1094/pdis-02-19-0384-re] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The intensive use of fungicides in controlling soybean rust (SBR), a damaging foliar fungal disease of soybean caused by the obligate fungus Phakopsora pachyrhizi, may have accelerated the insensitivity of P. pachyrhizi populations to fungicides. The objective of this study was to determine the effect of selected biopesticides and their application time on reducing SBR infection. There were differences (P < 0.05) in percent rust reduction values for application times, biopesticide treatments, and their interaction in detached-leaf and whole-plant greenhouse experiments. All application times and nearly all biopesticide treatments reduced (α = 0.05) fungal infection compared with the nonfungicide control. Among the treatments, Bacillus subtilis QST 713 and acibenzolar-S-methyl often reduced fungal sporulation more than the other treatments in detached-leaf and whole-plant greenhouse experiments. The identification of biopesticides effective to P. pachyrhizi may be a valuable alternative or complement to synthetic fungicides and may be useful in integrated pest management programs for SBR control.
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Affiliation(s)
- M Twizeyimana
- Department of Crop Sciences, University of Illinois Urbana-Champaign, Urbana, IL 61801
| | - G L Hartman
- Department of Crop Sciences, University of Illinois Urbana-Champaign, Urbana, IL 61801
- U.S. Department of Agriculture Agricultural Research Service, Urbana, IL 61801
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20
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21
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Gonçalves VN, Vitoreli GA, de Menezes GCA, Mendes CRB, Secchi ER, Rosa CA, Rosa LH. Taxonomy, phylogeny and ecology of cultivable fungi present in seawater gradients across the Northern Antarctica Peninsula. Extremophiles 2017; 21:1005-1015. [PMID: 28856503 DOI: 10.1007/s00792-017-0959-6] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2017] [Accepted: 08/21/2017] [Indexed: 01/01/2023]
Abstract
Thirty-six seawater samples collected at different depths of the Gerlache and Bransfield Straits in the Northern Antarctic Peninsula were analyzed, and the average of the total fungal counts ranged from 0.3 to >300 colony forming units per liter (CFU/L) in density. The fungal were purified and identified as 15 taxa belonged to the genera Acremonium, Aspergillus, Cladosporium, Cystobasidium, Exophiala, Glaciozyma, Graphium, Lecanicillium, Metschnikowia, Penicillium, Purpureocillium and Simplicillium. Penicillium chrysogenum, Cladosporium sphaerospermum, and Graphium rubrum were found at high densities in at least two different sites and depths. Our results show at the first time that in the seawater of Antarctic Ocean occur diverse fungal assemblages despite extreme conditions, which suggests the presence of a complex aquatic fungi food web, including species reported as barophiles, symbionts, weak and strong saprobes, parasites and pathogens, as well as those found in the polluted environments of the world. Additionally, some taxa were found in different sites, suggesting that the underwater current might contribute to fungal (and microbial) dispersal across the Antarctic Ocean, and nearby areas such as South America and Australia.
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Affiliation(s)
- Vívian N Gonçalves
- Department of Microbiology, Federal University of Minas Gerais (UFMG), Belo Horizonte, MG, CEP 31270-901, Brazil
| | - Gislaine A Vitoreli
- Department of Microbiology, Federal University of Minas Gerais (UFMG), Belo Horizonte, MG, CEP 31270-901, Brazil
| | - Graciéle C A de Menezes
- Department of Microbiology, Federal University of Minas Gerais (UFMG), Belo Horizonte, MG, CEP 31270-901, Brazil
| | - Carlos R B Mendes
- Institute of Oceanography, Federal University of Rio Grande (FURG), Rio Grande, RS, Brazil
| | - Eduardo R Secchi
- Institute of Oceanography, Federal University of Rio Grande (FURG), Rio Grande, RS, Brazil
| | - Carlos A Rosa
- Department of Microbiology, Federal University of Minas Gerais (UFMG), Belo Horizonte, MG, CEP 31270-901, Brazil
- Institute of Oceanography, Federal University of Rio Grande (FURG), Rio Grande, RS, Brazil
| | - Luiz H Rosa
- Department of Microbiology, Federal University of Minas Gerais (UFMG), Belo Horizonte, MG, CEP 31270-901, Brazil.
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22
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Dong Q, Dong R, Xing X, Li Y. A new antibiotic produced by the cyanobacterium-symbiotic fungus Simplicillium lanosoniveum. Nat Prod Res 2017. [PMID: 28629233 DOI: 10.1080/14786419.2017.1343320] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
The culture broth of the cyanobacterium-symbiotic fungus Simplicillium lanosoniveum var. Tianjinienss Q. L. Dong exhibited unanticipated antibacterial activities against the Gram-positive bacteria, particularly the pathogenic bacterium Staphylococcus aureus, indicating the secretion of antibiotic-like metabolite, for which the modified Sabouraud medium was the suitable medium. The antibiotic-like metabolite was separated with macroporous resins CT-12 (absorption) and 95% ethanol (desorption), purified by ion-exchange resins D301T and displayed a characteristic absorption peak at 228 nm, suggesting the presence of nitrogen. The negative biuret and ninhydrin tests confirmed the absence of -NH2 and -COOH groups. Further, HPLC and mass spectrometry analyses showed that the retention time and molecular weight of the antibiotic-like metabolite were 4.1031 min and 163.0182 (Δ ± 2.3 ppm), respectively. Taking together, we speculated that the antibiotic-like metabolite was a new antibiotic structurally similar to alkaloid, which was the first one isolated from the species of Simplicillium genus.
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Affiliation(s)
- Qinglin Dong
- a Department of Bioengineering, School of Chemical Engineering and Technology , Hebei University of Technology , Tianjin , P. R. China
| | - Rongzhen Dong
- a Department of Bioengineering, School of Chemical Engineering and Technology , Hebei University of Technology , Tianjin , P. R. China
| | - Xiangying Xing
- b Department of Applied Chemistry, School of Chemical Engineering and Technology , Hebei University of Technology , Tianjin , P. R. China
| | - Yukuan Li
- a Department of Bioengineering, School of Chemical Engineering and Technology , Hebei University of Technology , Tianjin , P. R. China
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23
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Langenbach C, Campe R, Beyer SF, Mueller AN, Conrath U. Fighting Asian Soybean Rust. FRONTIERS IN PLANT SCIENCE 2016; 7:797. [PMID: 27375652 PMCID: PMC4894884 DOI: 10.3389/fpls.2016.00797] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2015] [Accepted: 05/22/2016] [Indexed: 05/18/2023]
Abstract
Phakopsora pachyrhizi is a biotrophic fungus provoking SBR disease. SBR poses a major threat to global soybean production. Though several R genes provided soybean immunity to certain P. pachyrhizi races, the pathogen swiftly overcame this resistance. Therefore, fungicides are the only current means to control SBR. However, insensitivity to fungicides is soaring in P. pachyrhizi and, therefore, alternative measures are needed for SBR control. In this article, we discuss the different approaches for fighting SBR and their potential, disadvantages, and advantages over other measures. These encompass conventional breeding for SBR resistance, transgenic approaches, exploitation of transcription factors, secondary metabolites, and antimicrobial peptides, RNAi/HIGS, and biocontrol strategies. It seems that an integrating approach exploiting different measures is likely to provide the best possible means for the effective control of SBR.
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Affiliation(s)
- Caspar Langenbach
- Department of Plant Physiology, RWTH Aachen UniversityAachen, Germany
| | - Ruth Campe
- BASF Plant Science Company GmbHLimburgerhof, Germany
| | | | - André N. Mueller
- Department of Plant Physiology, RWTH Aachen UniversityAachen, Germany
| | - Uwe Conrath
- Department of Plant Physiology, RWTH Aachen UniversityAachen, Germany
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24
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Le Dang Q, Shin TS, Park MS, Choi YH, Choi GJ, Jang KS, Kim IS, Kim JC. Antimicrobial activities of novel mannosyl lipids isolated from the biocontrol fungus Simplicillium lamellicola BCP against phytopathogenic bacteria. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:3363-70. [PMID: 24660753 DOI: 10.1021/jf500361e] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
The antagonistic fungus Simplicillium lamellicola BCP has been developed as a microbial biopesticide that effectively controls the development of various plant diseases caused by both pathogenic bacteria and pathogenic fungi. Antibacterial bioassay-directed fractionation was used to isolate mannosyl lipids from S. lamellicola BCP, and the structures of these compounds were elucidated using spectral analysis and chemical degradation. Three novel mannosyl lipids were characterized and identified as halymecins F and G and (3R,5R)-3-O-β-D-mannosyl-3,5-dihydrodecanoic acid. Massoia lactone and (3R, 5R)-3-hydroxydecan-5-olide were also isolated from S. lamellicola BCP. The three novel compounds inhibited the growth of the majority of phytopathogenic bacteria that were tested, and halymecin F displayed the strongest antibacterial activity. Agrobacterium tumefaciens was the most sensitive to the three novel compounds, with IC₅₀ values ranging from 1.58 to 24.8 μg/mL. The ethyl acetate extract of the fermentation broth from the antagonistic fungus effectively reduced the bacterial wilt caused by Ralstonia solanacearum on tomato seedlings. These results indicate that S. lamellicola BCP suppresses the development of plant bacterial diseases through the production of antibacterial metabolites.
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Affiliation(s)
- Quang Le Dang
- Research Center for Biobased Chemistry, Division of Convergence Chemistry, Korea Research Institute of Chemical Technology , 141 Gajeong-ro, Yuseong-Gu, Daejeon 305-600, Republic of Korea
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