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Wille M, Atkinson R, Barr IG, Burgoyne C, Bond AL, Boyle D, Christie M, Dewar M, Douglas T, Fitzwater T, Hassell C, Jessop R, Klaassen H, Lavers JL, Leung KK, Ringma J, Sutherland DR, Klaassen M. Long-Distance Avian Migrants Fail to Bring 2.3.4.4b HPAI H5N1 Into Australia for a Second Year in a Row. Influenza Other Respir Viruses 2024; 18:e13281. [PMID: 38556461 PMCID: PMC10982072 DOI: 10.1111/irv.13281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Accepted: 03/07/2024] [Indexed: 04/02/2024] Open
Affiliation(s)
- Michelle Wille
- Centre for Pathogen Genomics, Department of Microbiology and Immunology, Peter Doherty Institute for Infection and ImmunityThe University of MelbourneMelbourneVictoriaAustralia
- WHO Collaborating Centre for Reference and Research on InfluenzaPeter Doherty Institute for Infection and ImmunityMelbourneVictoriaAustralia
| | | | - Ian G. Barr
- WHO Collaborating Centre for Reference and Research on InfluenzaPeter Doherty Institute for Infection and ImmunityMelbourneVictoriaAustralia
- Department of Microbiology and Immunology, Peter Doherty Institute for Infection and ImmunityThe University of MelbourneMelbourneVictoriaAustralia
| | - Charlotte Burgoyne
- Northern Australia Quarantine StrategyDepartment of Agriculture, Fisheries and ForestryCanberraAustralian Capital TerritoryAustralia
| | | | - David Boyle
- Victorian Ornithological Research Group Inc.LeopoldVictoriaAustralia
| | - Maureen Christie
- Victorian Wader Study GroupMelbourneVictoriaAustralia
- Australasian Wader Studies GroupMelbourneVictoriaAustralia
- Friends of Shorebirds SECarpenter RocksSouth AustraliaAustralia
| | - Meagan Dewar
- Future Regions Research CentreFederation University AustraliaBerwickVictoriaAustralia
| | - Tegan Douglas
- Australasian Wader Studies GroupMelbourneVictoriaAustralia
- BirdLife AustraliaMelbourneVictoriaAustralia
| | - Teagan Fitzwater
- Northern Australia Quarantine StrategyDepartment of Agriculture, Fisheries and ForestryCanberraAustralian Capital TerritoryAustralia
| | - Chris Hassell
- Australasian Wader Studies GroupMelbourneVictoriaAustralia
- Global Flyway NetworkBroomeWestern AustraliaAustralia
| | - Roz Jessop
- Victorian Wader Study GroupMelbourneVictoriaAustralia
- Australasian Wader Studies GroupMelbourneVictoriaAustralia
| | - Hiske Klaassen
- School of Life and Environmental SciencesDeakin UniversityGeelongVictoriaAustralia
| | - Jennifer L. Lavers
- Bird GroupThe Natural History MuseumTringUK
- Esperance Tjaltjraak Native Title Aboriginal CorporationEsperanceWestern AustraliaAustralia
- Gulbali InstituteCharles Sturt UniversityWagga WaggaNew South WalesAustralia
| | | | | | - Duncan R. Sutherland
- Phillip Island Nature ParksCowesVictoriaAustralia
- School of BioSciencesThe University of MelbourneMelbourneVictoriaAustralia
| | - Marcel Klaassen
- Victorian Wader Study GroupMelbourneVictoriaAustralia
- Australasian Wader Studies GroupMelbourneVictoriaAustralia
- School of Life and Environmental SciencesDeakin UniversityGeelongVictoriaAustralia
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Montalban B, Hinou H. Glycoblotting-Based Ovo-Sulphoglycomics Reveals Phosphorylated N-Glycans as a Possible Host Factor of AIV Prevalence in Waterfowls. ACS Infect Dis 2024; 10:650-661. [PMID: 38173147 PMCID: PMC10863614 DOI: 10.1021/acsinfecdis.3c00520] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Revised: 11/27/2023] [Accepted: 12/22/2023] [Indexed: 01/05/2024]
Abstract
Sulfated N-glycans play a crucial role in the interaction between influenza A virus (IAV) and its host. These glycans have been found to enhance viral replication, highlighting their significance in IAV propagation. This study investigated the expression of acidic N-glycans, specifically sulfated and phosphorylated glycans, in the egg whites of 72 avian species belonging to the Order Anseriformes (waterfowls). We used the glycoblotting-based sulphoglycomics approach to elucidate the diversity of acidic N-glycans and infer their potential role in protecting embryos from infections. Family-specific variations in sulfated and phosphorylated N-glycan profiles were identified in waterfowl egg whites. Different waterfowl species exhibited distinct expressions of sulfated trans-Gal(+) and trans-Gal(-) N-glycan structures. Additionally, species-specific expression of phosphorylated N-glycans was observed. Furthermore, it was found that waterfowl species with high avian influenza virus (AIV) prevalence displayed a higher abundance of phosphorylated hybrid and high-mannose N-glycans on their egg whites. These findings shed light on the importance of phosphorylated and sulfated N-glycans in understanding the role of acidic glycans in IAV propagation.
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Affiliation(s)
- Bryan
M. Montalban
- Laboratory
of Advanced Chemical Biology, Graduate School of Life Science, Hokkaido University, Sapporo 001-0021, Japan
| | - Hiroshi Hinou
- Laboratory
of Advanced Chemical Biology, Graduate School of Life Science, Hokkaido University, Sapporo 001-0021, Japan
- Frontier
Research Center for Advanced Material and Life Science, Faculty of
Advanced Life Science, Hokkaido University, Sapporo 001-0021, Japan
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3
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Ross TA, Zhang J, Wille M, Ciesielski TM, Asimakopoulos AG, Lemesle P, Skaalvik TG, Atkinson R, Jessop R, Jaspers VLB, Klaassen M. Assessment of contaminants, health and survival of migratory shorebirds in natural versus artificial wetlands - The potential of wastewater treatment plants as alternative habitats. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 904:166309. [PMID: 37586507 DOI: 10.1016/j.scitotenv.2023.166309] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Revised: 08/12/2023] [Accepted: 08/12/2023] [Indexed: 08/18/2023]
Abstract
The rapid destruction of natural wetland habitats over past decades has been partially offset by an increase in artificial wetlands. However, these also include wastewater treatment plants, which may pose a pollution risk to the wildlife using them. We studied two long-distance Arctic-breeding migratory shorebird species, curlew sandpiper (Calidris ferruginea, n = 69) and red-necked stint (Calidris ruficollis, n = 103), while on their Australian non-breeding grounds using an artificial wetland at a wastewater treatment plant (WTP) and a natural coastal wetland. We compared pollutant exposure (elements and per- and poly-fluoroalkyl substances/PFASs), disease (avian influenza), physiological status (oxidative stress) of the birds at the two locations from 2011 to 2020, and population survival from 1978 to 2019. Our results indicated no significant differences in blood pellet pollutant concentrations between the habitats except mercury (WTP median: 224 ng/g, range: 19-873 ng/g; natural wetland: 160 ng/g, 22-998 ng/g) and PFASs (total PFASs WTP median: 85.1 ng/g, range: <0.01-836 ng/g; natural wetland: 8.02 ng/g, <0.01-85.3 ng/g) which were higher at the WTP, and selenium which was lower at the WTP (WTP median: 5000 ng/g, range: 1950-34,400 ng/g; natural wetland: 19,200 ng/g, 4130-65,200 ng/g). We also measured higher blood o,o'-dityrosine (an indicator of protein damage) at the WTP. No significant differences were found for adult survival, but survival of immature birds at the WTP appeared to be lower which could be due to higher dispersal to other wetlands. Interestingly, we found active avian influenza infections were higher in the natural habitat, while seropositivity was higher in the WTP, seemingly not directly related to pollutant exposure. Overall, we found limited differences in pollutant exposure, health and survival of the shorebirds in the two habitats. Our findings suggest that appropriately managed wastewater treatment wetlands could provide a suitable alternative habitat to these migratory species, which may aid in curbing the decline of shorebird populations from widespread habitat loss.
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Affiliation(s)
- Tobias A Ross
- School of Life and Environmental Sciences, Deakin University, Geelong Waurn Ponds Campus, VIC 3216, Australia.
| | - Junjie Zhang
- Department of Chemistry, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway
| | - Michelle Wille
- Sydney School for Infectious Diseases, School of Life and Environmental Sciences and School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia; Department of Microbiology and Immunology, at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, VIC 3000, Australia; WHO Collaborating Centre for Reference and Research on Influenza, at the Peter Doherty Institute for Infection and Immunity, Melbourne, VIC 3000, Australia
| | - Tomasz Maciej Ciesielski
- Department of Biology, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway; Department of Arctic Technology, The University Center in Svalbard, 9171 Longyearbyen, Norway
| | | | - Prescillia Lemesle
- Department of Biology, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway
| | - Tonje G Skaalvik
- Department of Chemistry, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway
| | - Robyn Atkinson
- Victorian Wader Study Group, Thornbury, VIC, 3071, Australia
| | - Roz Jessop
- Victorian Wader Study Group, Thornbury, VIC, 3071, Australia
| | - Veerle L B Jaspers
- Department of Biology, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway
| | - Marcel Klaassen
- School of Life and Environmental Sciences, Deakin University, Geelong Waurn Ponds Campus, VIC 3216, Australia; Victorian Wader Study Group, Thornbury, VIC, 3071, Australia
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4
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Carnegie L, Raghwani J, Fournié G, Hill SC. Phylodynamic approaches to studying avian influenza virus. Avian Pathol 2023; 52:289-308. [PMID: 37565466 DOI: 10.1080/03079457.2023.2236568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Revised: 06/23/2023] [Accepted: 07/07/2023] [Indexed: 08/12/2023]
Abstract
Avian influenza viruses can cause severe disease in domestic and wild birds and are a pandemic threat. Phylodynamics is the study of how epidemiological, evolutionary, and immunological processes can interact to shape viral phylogenies. This review summarizes how phylodynamic methods have and could contribute to the study of avian influenza viruses. Specifically, we assess how phylodynamics can be used to examine viral spread within and between wild or domestic bird populations at various geographical scales, identify factors associated with virus dispersal, and determine the order and timing of virus lineage movement between geographic regions or poultry production systems. We discuss factors that can complicate the interpretation of phylodynamic results and identify how future methodological developments could contribute to improved control of the virus.
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Affiliation(s)
- L Carnegie
- Department of Pathobiology and Population Sciences, Royal Veterinary College (RVC), Hatfield, UK
| | - J Raghwani
- Department of Pathobiology and Population Sciences, Royal Veterinary College (RVC), Hatfield, UK
| | - G Fournié
- Department of Pathobiology and Population Sciences, Royal Veterinary College (RVC), Hatfield, UK
- Université de Lyon, INRAE, VetAgro Sup, UMR EPIA, Marcy l'Etoile, France
- Université Clermont Auvergne, INRAE, VetAgro Sup, UMR EPIA, Saint Genes Champanelle, France
| | - S C Hill
- Department of Pathobiology and Population Sciences, Royal Veterinary College (RVC), Hatfield, UK
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Yin S, Li N, Xu W, Becker DJ, de Boer WF, Xu C, Mundkur T, Fountain-Jones NM, Li C, Han GZ, Wu Q, Prosser DJ, Cui L, Huang ZYX. Functional traits explain waterbirds' host status, subtype richness, and community-level infection risk for avian influenza. Ecol Lett 2023; 26:1780-1791. [PMID: 37586885 DOI: 10.1111/ele.14294] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Accepted: 07/17/2023] [Indexed: 08/18/2023]
Abstract
Species functional traits can influence pathogen transmission processes, and consequently affect species' host status, pathogen diversity, and community-level infection risk. We here investigated, for 143 European waterbird species, effects of functional traits on host status and pathogen diversity (subtype richness) for avian influenza virus at species level. We then explored the association between functional diversity and HPAI H5Nx occurrence at the community level for 2016/17 and 2021/22 epidemics in Europe. We found that both host status and subtype richness were shaped by several traits, such as diet guild and dispersal ability, and that the community-weighted means of these traits were also correlated with community-level risk of H5Nx occurrence. Moreover, functional divergence was negatively associated with H5Nx occurrence, indicating that functional diversity can reduce infection risk. Our findings highlight the value of integrating trait-based ecology into the framework of diversity-disease relationship, and provide new insights for HPAI prediction and prevention.
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Affiliation(s)
- Shenglai Yin
- College of Life Sciences, Nanjing Normal University, Nanjing, China
| | - Ning Li
- Institute of Applied Ecology, Nanjing Xiaozhuang University, Nanjing, China
| | - Wenjie Xu
- College of Life Sciences, Nanjing Normal University, Nanjing, China
| | - Daniel J Becker
- Department of Biology, University of Oklahoma, Norman, Oklahoma, USA
| | - Willem F de Boer
- Wildlife Ecology and Conservation Group, Wageningen University, Wageningen, The Netherlands
| | - Chi Xu
- School of Life Sciences, Nanjing University, Nanjing, China
| | - Taej Mundkur
- Wetlands International, Ede, The Netherlands
- Good Earth Environmental, Arnhem, The Netherlands
| | | | - Chunlin Li
- School of Resources and Environmental Engineering, Anhui University, Hefei, China
| | - Guan-Zhu Han
- College of Life Sciences, Nanjing Normal University, Nanjing, China
| | - Qiang Wu
- College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Diann J Prosser
- Eastern Ecological Science Center, United States Geological Survey, Laurel, Maryland, USA
| | - Lijuan Cui
- Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China
| | - Zheng Y X Huang
- College of Life Sciences, Nanjing Normal University, Nanjing, China
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Wille M, Klaassen M. No evidence for HPAI H5N1 2.3.4.4b incursion into Australia in 2022. Influenza Other Respir Viruses 2023; 17:e13118. [PMID: 36909297 PMCID: PMC9995809 DOI: 10.1111/irv.13118] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 02/16/2023] [Indexed: 03/11/2023] Open
Affiliation(s)
- Michelle Wille
- Sydney Institute for Infectious Diseases, School of Medical Sciences The University of Sydney Sydney New South Wales Australia.,Department of Microbiology and Immunology, at the Peter Doherty Institute for Infection and Immunity The University of Melbourne Melbourne Victoria Australia.,WHO Collaborating Centre for Reference and Research on Influenza, at the Peter Doherty Institute for Infection and Immunity Melbourne Victoria Australia
| | - Marcel Klaassen
- Centre for Integrative Ecology Deakin University Geelong Victoria Australia.,Victorian Wader Study Group Thornbury Victoria Australia.,Australasian Wader Studies Group Curtin ACT Australia
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