Zero-one survival behavior of cyclically competing species

Influence of physical interactions on spatiotemporal patterns

Spatiotemporal patterns are often modeled using reaction-diffusion equations, which combine complex reactions between constituents with ideal diffusive motion. Such descriptions neglect physical interactions between constituents, which might affect resulting patterns. To overcome this, we study how physical interactions affect cyclic dominant reactions, like the seminal rock-paper-scissors game, which exhibits spiral waves for ideal diffusion. Generalizing diffusion to incorporate physical interactions, we find that weak interactions change the length- and time scales of spiral waves, consistent with a mapping to the complex Ginzburg-Landau equation. In contrast, strong repulsive interactions typically generate oscillating lattices, and strong attraction leads to an interplay of phase separation and chemical oscillations, like droplets co-locating with cores of spiral waves. Our work suggests that physical interactions are relevant for forming spatiotemporal patterns in nature, and it might shed light on how biodiversity is maintained in ecological settings.

Eco-evolutionary cyclic dominance among predators, prey, and parasites

Predator-prey interactions are one of ecology's central research themes, but with many interdisciplinary implications across the social and natural sciences. Here we consider an often-overlooked species in these interactions, namely parasites. We first show that a simple predator-prey-parasite model, inspired by the classical Lotka-Volterra equations, fails to produce a stable coexistence of all three species, thus failing to provide a biologically realistic outcome. To improve this, we introduce free space as a relevant eco-evolutionary component in a new mathematical model that uses a game-theoretical payoff matrix to describe a more realistic setup. We then show that the consideration of free space stabilizes the dynamics by means of cyclic dominance that emerges between the three species. We determine the parameter regions of coexistence as well as the types of bifurcations leading to it by means of analytical derivations as well as by means of numerical simulations. We conclude that the consideration of free space as a finite resource reveals the limits of biodiversity in predator-prey-parasite interactions, and it may also help us in the determination of factors that promote a healthy biota.

Controlling species densities in structurally perturbed intransitive cycles with higher-order interactions

The persistence of biodiversity of species is a challenging proposition in ecological communities in the face of Darwinian selection. The present article investigates beyond the pairwise competitive interactions and provides a novel perspective for understanding the influence of higher-order interactions on the evolution of social phenotypes. Our simple model yields a prosperous outlook to demonstrate the impact of perturbations on intransitive competitive higher-order interactions. Using a mathematical technique, we show how alone the perturbed interaction network can quickly determine the coexistence equilibrium of competing species instead of solving a large system of ordinary differential equations. It is possible to split the system into multiple feasible cluster states depending on the number of perturbations. Our analysis also reveals that the ratio between the unperturbed and perturbed species is inversely proportional to the amount of employed perturbation. Our results suggest that nonlinear dynamical systems and interaction topologies can be interplayed to comprehend species' coexistence under adverse conditions. Particularly, our findings signify that less competition between two species increases their abundance and outperforms others.

Enhancing coexistence of mobile species in the cyclic competition system by wildlife refuge

We investigate evolving dynamics of cyclically competing species on spatially extended systems with considering a specific region, which is called the "wildlife refuge," one of the institutional ways to preserve species biodiversity. Through Monte-Carlo simulations, we found that the refuge can play not groundbreaking but an important role in species survival. Species coexistence is maintained at a moderate mobility regime, which traditionally leads to the collapse of coexistence, and eventually, the extinction is postponed depending on the competition rate rather than the portion of the refuge. Incorporating the extinction probability and Fourier transform supported our results in both stochastic and analogous ways. Our findings may provide valuable evidence to assist fields of ecological/biological sciences in understanding the presence and construction of refuges for wildlife with associated effects on species biodiversity.

Correlation between the formation of new competing group and spatial scale for biodiversity in the evolutionary dynamics of cyclic competition

Securing space for species breeding is important in the evolution and maintenance of life in ecological sciences, and an increase in the number of competing species may cause frequent competition and conflict among the population in securing such spaces in a given area. In particular, for cyclically competing species, which can be described by the metaphor of rock-paper-scissors game, most of the previous works in microscopic frameworks have been studied with the initially given three species without any formation of additional competing species, and the phase transition of biodiversity via mobility from coexistence to extinction has never been changed by a change of spatial scale. In this regard, we investigate the relationship between spatial scales and species coexistence in the spatial cyclic game by considering the emergence of a new competing group by mutation. For different spatial scales, our computations reveal that coexistence can be more sensitive to spatial scales and may require larger spaces for frequencies of interactions. By exploiting the calculation of the coexistence probability from Monte-Carlo simulations, we obtain that certain interaction ranges for coexistence can be affected by both spatial scales and mobility, and spatial patterns for coexistence can appear in different ways. Since the issue of spatial scale is important for species survival as competing populations increase, we expect our results to have broad applications in the fields of social and ecological sciences.

Emerging spatiotemporal patterns in cyclic predator-prey systems with habitats

Three-species cyclic predator-prey systems are known to establish spiral waves that allow species to coexist. In this study, we analyze a structured heterogeneous system which gives one species an advantage to escape predation in an area that we refer to as a habitat and study the effect on species coexistence and emerging spatiotemporal patterns. Counterintuitively, the predator of the advantaged species emerges as dominant species with the highest average density inside the habitat. The species given the advantage in the form of an escape rate has the lowest average density until some threshold value for the escape rate is exceeded, after which the density of the species with the advantage overtakes that of its prey. Numerical analysis of the spatial density of each species as well as of the spatial two-point correlation function for both inside and outside the habitats allow a detailed quantitative discussion. Our analysis is extended to a six-species game that exhibits spontaneous spiral waves, which displays similar but more complicated results.

Lotka-Volterra versus May-Leonard formulations of the spatial stochastic rock-paper-scissors model: The missing link

The rock-paper-scissors (RPS) model successfully reproduces some of the main features of simple cyclic predator-prey systems with interspecific competition observed in nature. Still, lattice-based simulations of the spatial stochastic RPS model are known to give rise to significantly different results, depending on whether the three-state Lotka-Volterra or the four-state May-Leonard formulation is employed. This is true independently of the values of the model parameters and of the use of either a von Neumann or a Moore neighborhood. In this paper, we introduce a simple modification to the standard spatial stochastic RPS model in which the range of the search of the nearest neighbor may be extended up to a maximum Euclidean radius R. We show that, with this adjustment, the Lotka-Volterra and May-Leonard formulations can be designed to produce similar results, both in terms of dynamical properties and spatial features, by means of an appropriate parameter choice. In particular, we show that this modified spatial stochastic RPS model naturally leads to the emergence of spiral patterns in both its three- and four-state formulations.

Effect of mobility in the rock-paper-scissor dynamics with high mortality

In the evolutionary dynamics of a rock-paper-scissor model, the effect of natural death plays a major role in determining the fate of the system. Coexistence, being an unstable fixed point of the model, becomes very sensitive toward this parameter. In order to study the effect of mobility in such a system which has explicit dependence on mortality, we perform Monte Carlo simulation on a two-dimensional lattice having three cyclically competing species. The spatiotemporal dynamics has been studied along with the two-site correlation function. Spatial distribution exhibits emergence of spiral patterns in the presence of mobility. It reveals that the joint effect of death rate and mobility (diffusion) leads to new coexistence and extinction scenarios.

Stability analysis of the coexistence equilibrium of a balanced metapopulation model

We analyze the stability of a unique coexistence equilibrium point of a system of ordinary differential equations (ODE system) modelling the dynamics of a metapopulation, more specifically, a set of local populations inhabiting discrete habitat patches that are connected to one another through dispersal or migration. We assume that the inter-patch migrations are detailed balanced and that the patches are identical with intra-patch dynamics governed by a mean-field ODE system with a coexistence equilibrium. By making use of an appropriate Lyapunov function coupled with LaSalle's invariance principle, we are able to show that the coexistence equilibrium point within each patch is locally asymptotically stable if the inter-patch dispersal network is heterogeneous, whereas it is neutrally stable in the case of a homogeneous network. These results provide a mathematical proof confirming the existing numerical simulations and broaden the range of networks for which they are valid.

Environment driven oscillation in an off-lattice May-Leonard model

Cyclic dominance of competing species is an intensively used working hypothesis to explain biodiversity in certain living systems, where the evolutionary selection principle would dictate a single victor otherwise. Technically the May–Leonard models offer a mathematical framework to describe the mentioned non-transitive interaction of competing species when individual movement is also considered in a spatial system. Emerging rotating spirals composed by the competing species are frequently observed character of the resulting patterns. But how do these spiraling patterns change when we vary the external environment which affects the general vitality of individuals? Motivated by this question we suggest an off-lattice version of the tradition May–Leonard model which allows us to change the actual state of the environment gradually. This can be done by introducing a local carrying capacity parameter which value can be varied gently in an off-lattice environment. Our results support a previous analysis obtained in a more intricate metapopulation model and we show that the well-known rotating spirals become evident in a benign environment when the general density of the population is high. The accompanying time-dependent oscillation of competing species can also be detected where the amplitude and the frequency show a scaling law of the parameter that characterizes the state of the environment. These observations highlight that the assumed non-transitive interaction alone is insufficient condition to maintain biodiversity safely, but the actual state of the environment, which characterizes the general living conditions, also plays a decisive role on the evolution of related systems.

Mortality makes coexistence vulnerable in evolutionary game of rock-paper-scissors

Multiple species in the ecosystem are believed to compete cyclically for maintaining balance in nature. The evolutionary dynamics of cyclic interaction crucially depends on different interactions representing different natural habits. Based on a rock-paper-scissors model of cyclic competition, we explore the role of mortality of individual organisms in the collective survival of a species. For this purpose a parameter called "natural death" is introduced. It is meant for bringing about the decease of an individual irrespective of any intra- and interspecific interaction. We perform a Monte Carlo simulation followed by a stability analysis of different fixed points of defined rate equations and observe that the natural death rate is surprisingly one of the most significant factors in deciding whether an ecosystem would come up with a coexistence or a single-species survival.

Analytical treatment for cyclic three-state dynamics on static networks

Whenever a dynamical process unfolds on static networks, the dynamical state of any focal individual will be exclusively influenced by directly connected neighbors, rather than by those unconnected ones, hence the arising of the dynamical correlation problem, where mean-field-based methods fail to capture the scenario. The dynamic correlation coupling problem has always been an important and difficult problem in the theoretical field of physics. The explicit analytical expressions and the decoupling methods often play a key role in the development of corresponding field. In this paper, we study the cyclic three-state dynamics on static networks, which include a wide class of dynamical processes, for example, the cyclic Lotka-Volterra model, the directed migration model, the susceptible-infected-recovered-susceptible epidemic model, and the predator-prey with empty sites model. We derive the explicit analytical solutions of the propagating size and the threshold curve surface for the four different dynamics. We compare the results on static networks with those on annealed networks and made an interesting discovery: for the symmetrical dynamical model (the cyclic Lotka-Volterra model and the directed migration model, where the three states are of rotational symmetry), the macroscopic behaviors of the dynamical processes on static networks are the same as those on annealed networks; while the outcomes of the dynamical processes on static networks are different with, and more complicated than, those on annealed networks for asymmetric dynamical model (the susceptible-infected-recovered-susceptible epidemic model and the predator-prey with empty sites model). We also compare the results forecasted by our theoretical method with those by Monte Carlo simulations and find good agreement between the results obtained by the two methods.

Predominance of the weakest species in Lotka-Volterra and May-Leonard formulations of the rock-paper-scissors model

We revisit the problem of the predominance of the "weakest" species in the context of Lotka-Volterra and May-Leonard formulations of a spatial stochastic rock-paper-scissors model in which one of the species has its predation probability reduced by 0<P_{w}<1. We show that, despite the different population dynamics and spatial patterns, these two formulations lead to qualitatively similar results for the late time values of the relative abundances of the three species (as a function of P_{w}), as long as the simulation lattices are sufficiently large for coexistence to prevail-the "weakest" species generally having an advantage over the others (specially over its predator). However, for smaller simulation lattices, we find that the relatively large oscillations at the initial stages of simulations with random initial conditions may result in a significant dependence of the probability of species survival on the lattice size.

The Effects of Colicin Production Rates on Allelopathic Interactions in Escherichia coli Populations

Allelopathic interactions mediated by bacteriocins production serve microorganisms in the never-ending battle for resources and living space. Competition between the bacteriocin producer and sensitive populations results in the exclusion of one or the other depending on their initial frequencies, the structure of their habitat, their community density and their nutrient availability. These interactions were extensively studied in bacteriocins produced by Escherichia coli, the colicins. In spatially structured environments where interactions are local, colicin production has been shown to be advantageous to the producer population, allowing them to compete even when initially rare. Yet, in a well-mixed, unstructured environment where interactions are global, rare producer populations cannot invade a common sensitive population. Here we are showing, through an experimental model, that colicin-producers can outcompete sensitive and producer populations when the colicin production rates are enhanced. In fact, colicin production rates were proportional to the producer competitive fitness and their overall success in out-competing opponents when invading at very low initial frequencies. This ability of rare populations to invade established communities maintains diversity and allows the dispersal of beneficial traits.

Cooperation in Microbial Populations: Theory and Experimental Model Systems

Cooperative behavior, the costly provision of benefits to others, is common across all domains of life. This review article discusses cooperative behavior in the microbial world, mediated by the exchange of extracellular products called public goods. We focus on model species for which the production of a public good and the related growth disadvantage for the producing cells are well described. To unveil the biological and ecological factors promoting the emergence and stability of cooperative traits we take an interdisciplinary perspective and review insights gained from both mathematical models and well-controlled experimental model systems. Ecologically, we include crucial aspects of the microbial life cycle into our analysis and particularly consider population structures where ensembles of local communities (subpopulations) continuously emerge, grow, and disappear again. Biologically, we explicitly consider the synthesis and regulation of public good production. The discussion of the theoretical approaches includes general evolutionary concepts, population dynamics, and evolutionary game theory. As a specific but generic biological example, we consider populations of Pseudomonas putida and its regulation and use of pyoverdines, iron scavenging molecules, as public goods. The review closes with an overview on cooperation in spatially extended systems and also provides a critical assessment of the insights gained from the experimental and theoretical studies discussed. Current challenges and important new research opportunities are discussed, including the biochemical regulation of public goods, more realistic ecological scenarios resembling native environments, cell-to-cell signaling, and multispecies communities.

Emergence of oscillatory coexistence with exponentially decayed waiting times in a coupled cyclic competition system

Interpatch migration between two environments is generally considered as a spatial concept and can affect species biodiversity in each patch by inducing flux of population such as inflow and outflow quantities of species. In this paper, we explore the effect of interpatch migration, which can be generally considered as a spatial concept and may affect species biodiversity between two different patches in the perspective of the macroscopic level by exploiting the coupling of two systems, where each patch is occupied by cyclically competing three species who can stably coexist by exhibiting periodic orbits. For two simple scenarios of interpatch migration either single or all species migration, we found that two systems with independently stable coexisting species in each patch are eventually synchronized, and oscillatory behaviors of species densities in two patches become identical, i.e., the synchronized coexistence emerges. In addition, we find that, whether single or all species interpatch migration occurs, the waiting time for the synchronization is exponentially decreasing as the coupling strength is intensified. Our findings suggest that the synchronized behavior of species as a result of migration between different patches can be easily predicted by the coupling of systems and additional information such as waiting times and sensitivity of initial densities.

Robust coexistence with alternative competition strategy in the spatial cyclic game of five species

Alternative strategy is common in animal populations to promote reproductive fitness by obtaining resources. In spatial dynamics of cyclic competition, reproduction can occur when individuals obtain vacant rooms and, in this regard, empty sites should be resources for reproduction which can be induced by interspecific competition. In this paper, we study the role of alternative competition in the spatial system of cyclically competing five species by utilizing rock-paper-scissors-lizard-spock game. From Monte-Carlo simulations, we found that strong alternative competition can lead to the reemergence of coexistence of five species regardless of mobility, which is never reported in previous works under the symmetric competition structure. By investigating the coexistence probability, we also found that coexistence alternates by passing certain degrees of alternative competition in combination with mobility. In addition, we provided evidences in the opposite scenario by strengthening spontaneous competition, which exhibits the reemergence of coexistence similarly. Our findings may suggest more comprehensive perspectives to interpret mechanisms for biodiversity by alternative strategies in spatially extended systems than previously reported.

Nonlinear dynamics with Hopf bifurcations by targeted mutation in the system of rock-paper-scissors metaphor

The role of mutation, which is an error process in gene evolution, in systems of cyclically competing species has been studied from various perspectives, and it is regarded as one of the key factors for promoting coexistence of all species. In addition to naturally occurring mutations, many experiments in genetic engineering have involved targeted mutation techniques such as recombination between DNA and somatic cell sequences and have studied genetic modifications through loss or augmentation of cell functions. In this paper, we investigate nonlinear dynamics with targeted mutation in cyclically competing species. In different ways to classic approaches of mutation in cyclic games, we assume that mutation may occur in targeted individuals who have been removed from intraspecific competition. By investigating each scenario depending on the number of objects for targeted mutation analytically and numerically, we found that targeted mutation can lead to persistent coexistence of all species. In addition, under the specific condition of targeted mutation, we found that targeted mutation can lead to emergences of bistable states for species survival. Through the linear stability analysis of rate equations, we found that those phenomena are accompanied by Hopf bifurcation which is supercritical. Our findings may provide more global perspectives on understanding underlying mechanisms to control biodiversity in ecological/biological sciences, and evidences with mathematical foundations to resolve social dilemmas such as a turnover of group members by resigning with intragroup conflicts in social sciences.

Coevolution of nodes and links: Diversity-driven coexistence in cyclic competition of three species

When three species compete cyclically in a well-mixed, stochastic system of N individuals, extinction is known to typically occur at times scaling as the system size N. This happens, for example, in rock-paper-scissors games or conserved Lotka-Volterra models in which every pair of individuals can interact on a complete graph. Here we show that if the competing individuals also have a "social temperament" to be either introverted or extroverted, leading them to cut or add links, respectively, then long-living states in which all species coexist can occur. These nonequilibrium quasisteady states only occur when both introverts and extroverts are present, thus showing that diversity can lead to stability in complex systems. In this case, it enables a subtle balance between species competition and network dynamics to be maintained.

Metapopulation model of rock-scissors-paper game with subpopulation-specific victory rates stabilized by heterogeneity

Recently, metapopulation models for rock-paper-scissors games have been presented. Each subpopulation is represented by a node on a graph. An individual is either rock (R), scissors (S) or paper (P); it randomly migrates among subpopulations. In the present paper, we assume victory rates differ in different subpopulations. To investigate the dynamic state of each subpopulation (node), we numerically obtain the solutions of reaction-diffusion equations on the graphs with two and three nodes. In the case of homogeneous victory rates, we find each subpopulation has a periodic solution with neutral stability. However, when victory rates between subpopulations are heterogeneous, the solution approaches stable focuses. The heterogeneity of victory rates promotes the coexistence of species.

Metapopulation model for rock-paper-scissors game: Mutation affects paradoxical impacts

The rock-paper-scissors (RPS) game is known as one of the simplest cyclic dominance models. This game is key to understanding biodiversity. Three species, rock (R), paper (P) and scissors (S), can coexist in nature. In the present paper, we first present a metapopulation model for RPS game with mutation. Only mutation from R to S is allowed. The total population consists of spatially separated patches, and the mutation occurs in particular patches. We present reaction-diffusion equations which have two terms: reaction and migration terms. The former represents the RPS game with mutation, while the latter corresponds to random walk. The basic equations are solved analytically and numerically. It is found that the mutation induces one of three phases: the stable coexistence of three species, the stable phase of two species, and a single-species phase. The phase transitions among three phases occur by varying the mutation rate. We find the conditions for coexistence are largely changed depending on metapopulation models. We also find that the mutation induces different paradoxes in different patches.

Asymmetric interplay leads to robust coexistence by means of a global attractor in the spatial dynamics of cyclic competition

In the past decade, there have been many efforts to understand the species interplay with biodiversity in cyclic games within the macro and microscopic levels. In this direction, mobility and intraspecific competition have been found to be the main factors promoting coexistence in spatially extended systems. In this paper, we explore the relevant effect of asymmetric competitions coupled with mobility on the coexistence of cyclically competing species. By examining the coexistence probability, we have found that mobility can facilitate coexistence in the limited cases of asymmetric competition and can be well predicted by the basin structure of the deterministic system. In addition, it is found that mobility can have beneficial and harmful effects on coexistence when all competitions occur asymmetrically. We also found that the coexistence in the spatial dynamics ultimately becomes a global attractor. We hope to provide insights into the associated effects of asymmetric interplays on species coexistence in a spatially extended system and understand the biodiversity of asymmetrically competitive species under more complex competition structures.

Heterogeneous network promotes species coexistence: metapopulation model for rock-paper-scissors game

Understanding mechanisms of biodiversity has been a central question in ecology. The coexistence of three species in rock-paper-scissors (RPS) systems are discussed by many authors; however, the relation between coexistence and network structure is rarely discussed. Here we present a metapopulation model for RPS game. The total population is assumed to consist of three subpopulations (nodes). Each individual migrates by random walk; the destination of migration is randomly determined. From reaction-migration equations, we obtain the population dynamics. It is found that the dynamic highly depends on network structures. When a network is homogeneous, the dynamics are neutrally stable: each node has a periodic solution, and the oscillations synchronize in all nodes. However, when a network is heterogeneous, the dynamics approach stable focus and all nodes reach equilibriums with different densities. Hence, the heterogeneity of the network promotes biodiversity.

Biodiversity in the cyclic competition system of three species according to the emergence of mutant species

Understanding mechanisms which promote or hinder existing ecosystems are important issues in ecological sciences. In addition to fundamental interactions such as competition and migration among native species, existing ecosystems can be easily disturbed by external factors, and the emergence of new species may be an example in such cases. The new species which does not exist in a current ecosystem can be regarded as either alien species entered from outside or mutant species born by mutation in existing normal species. Recently, as existing ecosystems are getting influenced by various physical/chemical external factors, mutation due to anthropogenic and environmental factors can occur more frequently and is thus attracting much attention for the maintenance of ecosystems. In this paper, we consider emergences of mutant species among self-competing three species in the cyclic dominance. By defining mutation as the birth of mutant species, we investigate how mutant species can affect biodiversity in the existing ecosystem. Through microscopic and macroscopic approaches, we have found that the society of existing normal species can be disturbed by mutant species either the society is maintained accompanying with the coexistence of all species or jeopardized by occupying of mutant species. Due to the birth of mutant species, the existing society may be more complex by constituting two different groups of normal and mutant species, and our results can be contributed to analyze complex ecosystems of many species. We hope our findings may propose a new insight on mutation in cyclic competition systems of many species.

Survival behavior in the cyclic Lotka-Volterra model with a randomly switching reaction rate

We study the influence of a randomly switching reproduction-predation rate on the survival behavior of the nonspatial cyclic Lotka-Volterra model, also known as the zero-sum rock-paper-scissors game, used to metaphorically describe the cyclic competition between three species. In large and finite populations, demographic fluctuations (internal noise) drive two species to extinction in a finite time, while the species with the smallest reproduction-predation rate is the most likely to be the surviving one (law of the weakest). Here we model environmental (external) noise by assuming that the reproduction-predation rate of the strongest species (the fastest to reproduce and predate) in a given static environment randomly switches between two values corresponding to more and less favorable external conditions. We study the joint effect of environmental and demographic noise on the species survival probabilities and on the mean extinction time. In particular, we investigate whether the survival probabilities follow the law of the weakest and analyze their dependence on the external noise intensity and switching rate. Remarkably, when, on average, there is a finite number of switches prior to extinction, the survival probability of the predator of the species whose reaction rate switches typically varies nonmonotonically with the external noise intensity (with optimal survival about a critical noise strength). We also outline the relationship with the case where all reaction rates switch on markedly different time scales.

Emergence of unusual coexistence states in cyclic game systems

Evolutionary games of cyclic competitions have been extensively studied to gain insights into one of the most fundamental phenomena in nature: biodiversity that seems to be excluded by the principle of natural selection. The Rock-Paper-Scissors (RPS) game of three species and its extensions [e.g., the Rock-Paper-Scissors-Lizard-Spock (RPSLS) game] are paradigmatic models in this field. In all previous studies, the intrinsic symmetry associated with cyclic competitions imposes a limitation on the resulting coexistence states, leading to only selective types of such states. We investigate the effect of nonuniform intraspecific competitions on coexistence and find that a wider spectrum of coexistence states can emerge and persist. This surprising finding is substantiated using three classes of cyclic game models through stability analysis, Monte Carlo simulations and continuous spatiotemporal dynamical evolution from partial differential equations. Our finding indicates that intraspecific competitions or alternative symmetry-breaking mechanisms can promote biodiversity to a broader extent than previously thought.

Biodiversity in models of cyclic dominance is preserved by heterogeneity in site-specific invasion rates

Global, population-wide oscillations in models of cyclic dominance may result in the collapse of biodiversity due to the accidental extinction of one species in the loop. Previous research has shown that such oscillations can emerge if the interaction network has small-world properties, and more generally, because of long-range interactions among individuals or because of mobility. But although these features are all common in nature, global oscillations are rarely observed in actual biological systems. This begets the question what is the missing ingredient that would prevent local oscillations to synchronize across the population to form global oscillations. Here we show that, although heterogeneous species-specific invasion rates fail to have a noticeable impact on species coexistence, randomness in site-specific invasion rates successfully hinders the emergence of global oscillations and thus preserves biodiversity. Our model takes into account that the environment is often not uniform but rather spatially heterogeneous, which may influence the success of microscopic dynamics locally. This prevents the synchronization of locally emerging oscillations, and ultimately results in a phenomenon where one type of randomness is used to mitigate the adverse effects of other types of randomness in the system.

Zealots tame oscillations in the spatial rock-paper-scissors game

The rock-paper-scissors game is a paradigmatic model for biodiversity, with applications ranging from microbial populations to human societies. Research has shown, however, that mobility jeopardizes biodiversity by promoting the formation of spiral waves, especially if there is no conservation law in place for the total number of competing players. First, we show that even if such a conservation law applies, mobility still jeopardizes biodiversity in the spatial rock-paper-scissors game if only a small fraction of links of the square lattice is randomly rewired. Secondly, we show that zealots are very effective in taming the amplitude of oscillations that emerge due to mobility and/or interaction randomness, and this regardless of whether the later is quenched or annealed. While even a tiny fraction of zealots brings significant benefits, at 5% occupancy zealots practically destroy all oscillations regardless of the intensity of mobility, and regardless of the type and strength of randomness in the interaction structure. Interestingly, by annealed randomness the impact of zealots is qualitatively the same as by mobility, which highlights that fast diffusion does not necessarily destroy the coexistence of species, and that zealotry thus helps to recover the stable mean-field solution. Our results strengthen the important role of zealots in models of cyclic dominance, and they reveal fascinating evolutionary outcomes in structured populations that are a unique consequence of such uncompromising behavior.

Evolutionary game theory: cells as players

In two papers we review game theory applications in biology below the level of cognitive living beings. It can be seen that evolution and natural selection replace the rationality of the actors appropriately. Even in these micro worlds, competing situations and cooperative relationships can be found and modeled by evolutionary game theory. Also those units of the lowest levels of life show different strategies for different environmental situations or different partners. We give a wide overview of evolutionary game theory applications to microscopic units. In this first review situations on the cellular level are tackled. In particular metabolic problems are discussed, such as ATP-producing pathways, secretion of public goods and cross-feeding. Further topics are cyclic competition among more than two partners, intra- and inter-cellular signalling, the struggle between pathogens and the immune system, and the interactions of cancer cells. Moreover, we introduce the theoretical basics to encourage scientists to investigate problems in cell biology and molecular biology by evolutionary game theory.

Information Transfer between Generations Linked to Biodiversity in Rock-Paper-Scissors Games

Ecological processes, such as reproduction, mobility, and interaction between species, play important roles in the maintenance of biodiversity. Classically, the cyclic dominance of species has been modelled using the nonhierarchical interactions among competing species, represented by the “Rock-Paper-Scissors” (RPS) game. Here we propose a cascaded channel model for analyzing the existence of biodiversity in the RPS game. The transition between successive generations is modelled as communication of information over a noisy communication channel. The rate of transfer of information over successive generations is studied using mutual information and it is found that “greedy” information transfer between successive generations may lead to conditions for extinction. This generalized framework can be used to study biodiversity in any number of interacting species, ecosystems with unequal rates for different species, and also competitive networks.

A double-edged sword: Benefits and pitfalls of heterogeneous punishment in evolutionary inspection games

As a simple model for criminal behavior, the traditional two-strategy inspection game yields counterintuitive results that fail to describe empirical data. The latter shows that crime is often recurrent, and that crime rates do not respond linearly to mitigation attempts. A more apt model entails ordinary people who neither commit nor sanction crime as the third strategy besides the criminals and punishers. Since ordinary people free-ride on the sanctioning efforts of punishers, they may introduce cyclic dominance that enables the coexistence of all three competing strategies. In this setup ordinary individuals become the biggest impediment to crime abatement. We therefore also consider heterogeneous punisher strategies, which seek to reduce their investment into fighting crime in order to attain a more competitive payoff. We show that this diversity of punishment leads to an explosion of complexity in the system, where the benefits and pitfalls of criminal behavior are revealed in the most unexpected ways. Due to the raise and fall of different alliances no less than six consecutive phase transitions occur in dependence on solely the temptation to succumb to criminal behavior, leading the population from ordinary people-dominated across punisher-dominated to crime-dominated phases, yet always failing to abolish crime completely.

Mesoscopic interactions and species coexistence in evolutionary game dynamics of cyclic competitions

Evolutionary dynamical models for cyclic competitions of three species (e.g., rock, paper, and scissors, or RPS) provide a paradigm, at the microscopic level of individual interactions, to address many issues in coexistence and biodiversity. Real ecosystems often involve competitions among more than three species. By extending the RPS game model to five (rock-paper-scissors-lizard-Spock, or RPSLS) mobile species, we uncover a fundamental type of mesoscopic interactions among subgroups of species. In particular, competitions at the microscopic level lead to the emergence of various local groups in different regions of the space, each involving three species. It is the interactions among the groups that fundamentally determine how many species can coexist. In fact, as the mobility is increased from zero, two transitions can occur: one from a five- to a three-species coexistence state and another from the latter to a uniform, single-species state. We develop a mean-field theory to show that, in order to understand the first transition, group interactions at the mesoscopic scale must be taken into account. Our findings suggest, more broadly, the importance of mesoscopic interactions in coexistence of great many species.

Cyclic dominance in evolutionary games: a review

Rock is wrapped by paper, paper is cut by scissors and scissors are crushed by rock. This simple game is popular among children and adults to decide on trivial disputes that have no obvious winner, but cyclic dominance is also at the heart of predator-prey interactions, the mating strategy of side-blotched lizards, the overgrowth of marine sessile organisms and competition in microbial populations. Cyclical interactions also emerge spontaneously in evolutionary games entailing volunteering, reward, punishment, and in fact are common when the competing strategies are three or more, regardless of the particularities of the game. Here, we review recent advances on the rock-paper-scissors (RPS) and related evolutionary games, focusing, in particular, on pattern formation, the impact of mobility and the spontaneous emergence of cyclic dominance. We also review mean-field and zero-dimensional RPS models and the application of the complex Ginzburg-Landau equation, and we highlight the importance and usefulness of statistical physics for the successful study of large-scale ecological systems. Directions for future research, related, for example, to dynamical effects of coevolutionary rules and invasion reversals owing to multi-point interactions, are also outlined.

Characterization of spiraling patterns in spatial rock-paper-scissors games

The spatiotemporal arrangement of interacting populations often influences the maintenance of species diversity and is a subject of intense research. Here, we study the spatiotemporal patterns arising from the cyclic competition between three species in two dimensions. Inspired by recent experiments, we consider a generic metapopulation model comprising "rock-paper-scissors" interactions via dominance removal and replacement, reproduction, mutations, pair exchange, and hopping of individuals. By combining analytical and numerical methods, we obtain the model's phase diagram near its Hopf bifurcation and quantitatively characterize the properties of the spiraling patterns arising in each phase. The phases characterizing the cyclic competition away from the Hopf bifurcation (at low mutation rate) are also investigated. Our analytical approach relies on the careful analysis of the properties of the complex Ginzburg-Landau equation derived through a controlled (perturbative) multiscale expansion around the model's Hopf bifurcation. Our results allow us to clarify when spatial "rock-paper-scissors" competition leads to stable spiral waves and under which circumstances they are influenced by nonlinear mobility.

From pairwise to group interactions in games of cyclic dominance

We study the rock-paper-scissors game in structured populations, where the invasion rates determine individual payoffs that govern the process of strategy change. The traditional version of the game is recovered if the payoffs for each potential invasion stem from a single pairwise interaction. However, the transformation of invasion rates to payoffs also allows the usage of larger interaction ranges. In addition to the traditional pairwise interaction, we therefore consider simultaneous interactions with all nearest neighbors, as well as with all nearest and next-nearest neighbors, thus effectively going from single pair to group interactions in games of cyclic dominance. We show that differences in the interaction range affect not only the stationary fractions of strategies but also their relations of dominance. The transition from pairwise to group interactions can thus decelerate and even revert the direction of the invasion between the competing strategies. Like in evolutionary social dilemmas, in games of cyclic dominance, too, the indirect multipoint interactions that are due to group interactions hence play a pivotal role. Our results indicate that, in addition to the invasion rates, the interaction range is at least as important for the maintenance of biodiversity among cyclically competing strategies.

Mobility-dependent selection of competing strategy associations

Standard models of population dynamics focus on the interaction, survival, and extinction of the competing species individually. Real ecological systems, however, are characterized by an abundance of species (or strategies, in the terminology of evolutionary-game theory) that form intricate, complex interaction networks. The description of the ensuing dynamics may be aided by studying associations of certain strategies rather than individual ones. Here we show how such a higher-level description can bear fruitful insight. Motivated from different strains of colicinogenic Escherichia coli bacteria, we investigate a four-strategy system which contains a three-strategy cycle and a neutral alliance of two strategies. We find that the stochastic, spatial model exhibits a mobility-dependent selection of either the three-strategy cycle or of the neutral pair. We analyze this intriguing phenomenon numerically and analytically.

Persistent coexistence of cyclically competing species in spatially extended ecosystems

A fundamental result in the evolutionary-game paradigm of cyclic competition in spatially extended ecological systems, as represented by the classic Reichenbach-Mobilia-Frey (RMF) model, is that high mobility tends to hamper or even exclude species coexistence. This result was obtained under the hypothesis that individuals move randomly without taking into account the suitability of their local environment. We incorporate local habitat suitability into the RMF model and investigate its effect on coexistence. In particular, we hypothesize the use of "basic instinct" of an individual to determine its movement at any time step. That is, an individual is more likely to move when the local habitat becomes hostile and is no longer favorable for survival and growth. We show that, when such local habitat suitability is taken into account, robust coexistence can emerge even in the high-mobility regime where extinction is certain in the RMF model. A surprising finding is that coexistence is accompanied by the occurrence of substantial empty space in the system. Reexamination of the RMF model confirms the necessity and the important role of empty space in coexistence. Our study implies that adaptation/movements according to local habitat suitability are a fundamental factor to promote species coexistence and, consequently, biodiversity.

Global attractors and extinction dynamics of cyclically competing species

Transitions to absorbing states are of fundamental importance in nonequilibrium physics as well as ecology. In ecology, absorbing states correspond to the extinction of species. We here study the spatial population dynamics of three cyclically interacting species. The interaction scheme comprises both direct competition between species as in the cyclic Lotka-Volterra model, and separated selection and reproduction processes as in the May-Leonard model. We show that the dynamic processes leading to the transient maintenance of biodiversity are closely linked to attractors of the nonlinear dynamics for the overall species' concentrations. The characteristics of these global attractors change qualitatively at certain threshold values of the mobility and depend on the relative strength of the different types of competition between species. They give information about the scaling of extinction times with the system size and thereby the stability of biodiversity. We define an effective free energy as the negative logarithm of the probability to find the system in a specific global state before reaching one of the absorbing states. The global attractors then correspond to minima of this effective energy landscape and determine the most probable values for the species' global concentrations. As in equilibrium thermodynamics, qualitative changes in the effective free energy landscape indicate and characterize the underlying nonequilibrium phase transitions. We provide the complete phase diagrams for the population dynamics and give a comprehensive analysis of the spatio-temporal dynamics and routes to extinction in the respective phases.

Coexistence and survival in conservative Lotka-Volterra networks

Analyzing coexistence and survival scenarios of Lotka-Volterra (LV) networks in which the total biomass is conserved is of vital importance for the characterization of long-term dynamics of ecological communities. Here, we introduce a classification scheme for coexistence scenarios in these conservative LV models and quantify the extinction process by employing the Pfaffian of the network's interaction matrix. We illustrate our findings on global stability properties for general systems of four and five species and find a generalized scaling law for the extinction time.

Labyrinthine clustering in a spatial rock-paper-scissors ecosystem

The spatial rock-paper-scissors ecosystem, where three species interact cyclically, is a model example of how spatial structure can maintain biodiversity. We here consider such a system for a broad range of interaction rates. When one species grows very slowly, this species and its prey dominate the system by self-organizing into a labyrinthine configuration in which the third species propagates. The cluster size distributions of the two dominating species have heavy tails and the configuration is stabilized through a complex spatial feedback loop. We introduce a statistical measure that quantifies the amount of clustering in the spatial system by comparison with its mean-field approximation. Hereby, we are able to quantitatively explain how the labyrinthine configuration slows down the dynamics and stabilizes the system.

Evolution and stability of altruist strategies in microbial games

When microbes compete for limited resources, they often engage in chemical warfare using bacterial toxins. This competition can be understood in terms of evolutionary game theory (EGT). We study the predictions of EGT for the bacterial "suicide bomber" game in terms of the phase portraits of population dynamics, for parameter combinations that cover all interesting games for two-players, and seven of the 38 possible phase portraits of the three-player game. We compare these predictions to simulations of these competitions in finite well-mixed populations, but also allowing for probabilistic rather than pure strategies, as well as Darwinian adaptation over tens of thousands of generations. We find that Darwinian evolution of probabilistic strategies stabilizes games of the rock-paper-scissors type that emerge for parameters describing realistic bacterial populations, and point to ways in which the population fixed point can be selected by changing those parameters.

Evolutionary dynamics on stochastic evolving networks for multiple-strategy games

Evolutionary game theory on dynamical networks has received much attention. Most of the work has been focused on 2×2 games such as prisoner's dilemma and snowdrift, with general n×n games seldom addressed. In particular, analytical methods are still lacking. Here we generalize the stochastic linking dynamics proposed by Wu, Zhou, Fu, Luo, Wang, and Traulsen [PLoS ONE 5, e11187 (2010)] to n×n games. We analytically obtain that the fast linking dynamics results in the replicator dynamics with a rescaled payoff matrix. In the rescaled matrix, intuitively, each entry is the product of the original entry and the average duration time of the corresponding link. This result is shown to be robust to a wide class of imitation processes. As applications, we show both analytically and numerically that the biodiversity, modeled as the stability of a zero-sum rock-paper-scissors game, cannot be altered by the fast linking dynamics. In addition, we show that the fast linking dynamics can stabilize tit-for-tat as an evolutionary stable strategy in the repeated prisoner's dilemma game provided the interaction between the identical strategies happens sufficiently often. Our method paves the way for an analytical study of the multiple-strategy coevolutionary dynamics.

Ecological oscillations induced by a shared predator and the "Winner peaks first" rule

We investigate the dynamics of an ecological system made up of one predator feeding on two different prey species. In a large range of parameter space, the system displays oscillating solutions. We show that, in the regime in which the two preys coexist, the better fit prey consistently peaks first. Further, we classify the possible oscillations of the network by a symbolic dynamics method. Our findings show that the symbolic orbits of an ecological system contain information about which of two preys is the better fit, and when one is bound to extinction.

Effects of competition on pattern formation in the rock-paper-scissors game

We investigate the impact of cyclic competition on pattern formation in the rock-paper-scissors game. By separately considering random and prepared initial conditions, we observe a critical influence of the competition rate p on the stability of spiral waves and on the emergence of biodiversity. In particular, while increasing values of p promote biodiversity, they may act detrimentally on spatial pattern formation. For random initial conditions, we observe a phase transition from biodiversity to an absorbing phase, whereby the critical value of mobility grows linearly with increasing values of p on a log-log scale but then saturates as p becomes large. For prepared initial conditions, we observe the formation of single-armed spirals, but only for values of p that are below a critical value. Once above that value, the spirals break up and form disordered spatial structures, mainly because of the percolation of vacant sites. Thus there exists a critical value of the competition rates p(c) for stable single-armed spirals in finite populations. Importantly though, p(c) increases with increasing system size because noise reinforces the disintegration of ordered patterns. In addition, we also find that p(c) increases with the mobility. These phenomena are reproduced by a deterministic model that is based on nonlinear partial differential equations. Our findings indicate that competition is vital for the sustenance of biodiversity and the emergence of pattern formation in ecosystems governed by cyclical interactions.