1
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Åstrand M, Vogt U, Yang R, Villanueva Perez P, Li T, Lyubomirskiy M, Kahnt M. Multi-beam multi-slice X-ray ptychography. Sci Rep 2025; 15:9273. [PMID: 40102622 PMCID: PMC11920106 DOI: 10.1038/s41598-025-93757-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2024] [Accepted: 03/10/2025] [Indexed: 03/20/2025] Open
Abstract
X-ray ptychography provides the highest resolution non-destructive imaging at synchrotron radiation facilities, and the efficiency of this method is crucial for coping with limited experimental time. Recent advancements in multi-beam ptychography have enabled larger fields of view, but spatial resolution for large 3D samples remains constrained by their thickness, requiring consideration of multiple scattering events. Although this challenge has been addressed using multi-slicing in conventional ptychography, the integration of multi-slicing with multi-beam ptychography has not yet been explored. Here we present the first successful combination of these two methods, enabling high-resolution imaging of nanofeatures at depths comparable to the lateral dimensions that can be addressed by state-of-the-art multi-beam ptychography. Our approach is robust, reproducible across different beamlines, and ready for broader application. It marks a significant advancement in the field, establishing a new foundation for high-resolution 3D imaging of larger, thicker samples.
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Affiliation(s)
- Mattias Åstrand
- KTH Royal Institute of Technology, Department of Applied Physics, Bio-Opto-Nano Physics, Albanova University Center, 106 91, Stockholm, Sweden.
| | - Ulrich Vogt
- KTH Royal Institute of Technology, Department of Applied Physics, Bio-Opto-Nano Physics, Albanova University Center, 106 91, Stockholm, Sweden
| | - Runqing Yang
- MAX IV Laboratory, Lund University, Box 118, 221 00, Lund, Sweden
- Department of Physics, Synchrotron Radiation Research, Lund University, Box 118, 221 00, Lund, Sweden
| | - Pablo Villanueva Perez
- Department of Physics, Synchrotron Radiation Research, Lund University, Box 118, 221 00, Lund, Sweden
| | - Tang Li
- Center for X-ray and Nano Science CXNS, Deutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607, Hamburg, Germany
| | | | - Maik Kahnt
- MAX IV Laboratory, Lund University, Box 118, 221 00, Lund, Sweden
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2
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Pulnova Y, Parkman T, Angelov B, Baranova I, Zymaková A, Cipiccia S, Fardin L, Yorke BA, Antipenkov R, Peceli D, Hort O, Mai DD, Andreasson J, Nejdl J. Compact laser-driven plasma X-ray source for time-resolved diffraction, spectroscopy and imaging experiments at ELI Beamlines. JOURNAL OF SYNCHROTRON RADIATION 2025; 32:486-495. [PMID: 39969113 DOI: 10.1107/s1600577525000645] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2024] [Accepted: 01/24/2025] [Indexed: 02/20/2025]
Abstract
In this work, experimentally measured characteristics of a kilohertz laser-driven Cu plasma X-ray source that was recently commissioned at the ELI Beamlines facility are reported. The source can be driven either by an in-house developed high-contrast sub-20 fs near-infrared terawatt laser based on optical parametric chirped-pulse amplification technology or by a more conventional Ti:sapphire laser delivering 12 mJ and 45 fs pulses. The X-ray source parameters obtained with the two driving lasers are compared. A measured photon flux of the order up to 1012 Kα photons s-1 (4π)-1 is reported. Furthermore, experimental platforms for ultrafast X-ray diffraction and X-ray absorption and emission spectroscopy based on the reported source are described.
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Affiliation(s)
- Y Pulnova
- Faculty of Mathematics and Physics, Charles University, 121 16 Prague, Czechia
| | - T Parkman
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - B Angelov
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - I Baranova
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - A Zymaková
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - S Cipiccia
- Department of Medical Physics and Biomedical Engineering, University College London, 2 Malet Place, London WC1E 7JE, United Kingdom
| | - L Fardin
- Department of Medical Physics and Biomedical Engineering, University College London, 2 Malet Place, London WC1E 7JE, United Kingdom
| | - B A Yorke
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds LS2 9JT, United Kingdom
| | - R Antipenkov
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - D Peceli
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - O Hort
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - D D Mai
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - J Andreasson
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
| | - J Nejdl
- ELI Beamlines Facility, Extreme Light Infrastructure (ERIC), Za Radnicí 835, 252 41 Dolní Břežany, Czechia
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3
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Donath T, Trampari S, Wagner L, Jørgensen MRV, Gjørup FH, Checchia S, Di Michiel M, Papillon E, Vaughan G. Enhancing high-energy powder X-ray diffraction applications using a PILATUS4 CdTe detector. JOURNAL OF SYNCHROTRON RADIATION 2025; 32:378-384. [PMID: 39960474 DOI: 10.1107/s1600577525000566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2024] [Accepted: 01/21/2025] [Indexed: 03/11/2025]
Abstract
Hybrid photon counting detectors have significantly advanced synchrotron research. In particular, the introduction of large cadmium telluride-based detectors in 2015 enabled a whole new range of high-energy X-ray measurements. This article describes the specifications of the new PILATUS4 cadmium telluride detector and presents results from prototype testing for high-energy powder X-ray diffraction studies conducted at two synchrotrons. The experiments concern time-resolved in situ solid-state reactions at MAX IV (Sweden) and fast-scanning X-ray diffraction computed tomography of a battery cell at the ESRF (France). The detector's high quantum efficiency up to 100 keV, combined with a maximum frame rate of 4000 Hz, enables fast data collection. This study demonstrates how these capabilities contribute to improved time and spatial resolution in high-energy powder X-ray diffraction studies, facilitating advancements in materials, chemical and energy research.
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Affiliation(s)
| | | | - Lucas Wagner
- DECTRIS Ltd, Täfernweg 1, 5405 Baden, Switzerland
| | - Mads R V Jørgensen
- Department of Chemistry and Interdisciplinary Nanoscience Center (iNANO), Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
| | - Frederik H Gjørup
- Department of Chemistry and Interdisciplinary Nanoscience Center (iNANO), Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
| | | | | | | | - Gavin Vaughan
- European Synchrotron Radiation Facility, 38043 Grenoble, France
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4
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Andrä M, Bergamaschi A, Baruffaldi F, Brückner M, Carulla M, Casati N, Cervellino A, Dinapoli R, Fröjdh E, Greiffenberg D, Hasanaj S, Heymes J, Hinger V, Kozlowski P, Lopez Cuenca C, Meister D, Mezza D, Moustakas K, Mozzanica A, Paton K, Ruder C, Scagnoli V, Smolentsev G, Schmitt B, Thattil D, Xie X, Zhang J. MYTHEN III: advancements in single photon counting detectors for synchrotron powder diffraction experiments. JOURNAL OF SYNCHROTRON RADIATION 2025; 32:365-377. [PMID: 39946283 DOI: 10.1107/s1600577525000438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2024] [Accepted: 01/17/2025] [Indexed: 03/11/2025]
Abstract
The single photon counting microstrip detector MYTHEN III was developed at the Paul Scherrer Institute to satisfy the increasing demands in detector performance of synchrotron radiation experiments, focusing on time-resolved and on-edge powder diffraction measurements. Similar to MYTHEN II, the detector installed on the Material Science beamline covers 120° in 2θ. It is based on the MYTHEN III.0 readout chip wire-bonded to silicon strip sensors with a pitch of 50 µm, and it provides improved performance and features with respect to the previous version. Taking advantage of the three independent comparators of MYTHEN III, it is possible to obtain an improvement in the maximum count rate capability of the detector at 90% efficiency from 2.9 ± 0.8 Mphotons s-1 strip-1 to 11 ± 2 Mphotons s-1 strip-1 thanks to the detection of pile-up at high photon flux. The readout chip offers additional operation modes such as pump-probe and digital on-chip interpolation. The maximum frame rate is up to 360 kHz in 8-bit mode with dead-time-free readout. The minimum detectable energy of MYTHEN III is 4.3 ± 0.3 keV with a minimum equivalent noise charge (ENC) of 121 ± 8 electrons and a threshold dispersion below 33 ± 10 eV. The energy calibration is affected by temperature by less than 0.5% °C-1. This paper presents a comprehensive overview of the MYTHEN III detector system with performance benchmarks, and highlights the improvements reached in powder diffraction experiments compared with the previous detector generation.
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Affiliation(s)
- Marie Andrä
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Anna Bergamaschi
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Filippo Baruffaldi
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Martin Brückner
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Maria Carulla
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Nicola Casati
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Antonio Cervellino
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Roberto Dinapoli
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Erik Fröjdh
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | | | - Shqipe Hasanaj
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Julian Heymes
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Viktoria Hinger
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Pawel Kozlowski
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Carlos Lopez Cuenca
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Dominik Meister
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Davide Mezza
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | | | - Aldo Mozzanica
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Kirsty Paton
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Christian Ruder
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Valerio Scagnoli
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Grigory Smolentsev
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Bernd Schmitt
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Dhanya Thattil
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Xiangyu Xie
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
| | - Jiaguo Zhang
- Paul Scherrer Insitute, Forschungsstrasse 111, 5232 Villigen - PSI, Switzerland
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5
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Ghanbari R, Terry A, Wojno S, Bek M, Sekar K, Sonker AK, Nygård K, Ghai V, Bianco S, Liebi M, Matic A, Westman G, Nypelö T, Kádár R. Propagation of Orientation Across Lengthscales in Sheared Self-Assembling Hierarchical Suspensions via Rheo-PLI-SAXS. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2025; 12:e2410920. [PMID: 39721031 PMCID: PMC11831526 DOI: 10.1002/advs.202410920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2024] [Revised: 10/31/2024] [Indexed: 12/28/2024]
Abstract
Simultaneous rheological, polarized light imaging, and small-angle X-ray scattering experiments (Rheo-PLI-SAXS) are developed, thereby providing unprecedented level of insight into the multiscale orientation of hierarchical systems in simple shear. Notably, it is observed that mesoscale alignment in the flow direction does not develop simultaneously across nano-micro lengthscales in sheared suspensions of rod-like chiral-nematic (meso) phase forming cellulose nanocrystals. Rather, with increasing shear rate, orientation is observed first at mesoscale and then extends to the nanoscale, with influencing factors being the aggregation state of the hierarchy and concentration. In biphasic systems, where an isotropic phase co-exists with self-assembled liquid crystalline mesophase domains, the onset of mesodomain alignment towards the flow direction can occur at shear rates nearing one decade before a progressive increase in preferential orientation at nanoscale is detected. If physical confinement prevents the full formation of a cholesteric phase, mesoscale orientation occurs in shear rate ranges that correspond to de-structuring at nanoscale. Interestingly, nano- and mesoscale orientations appear to converge only for biphasic suspensions with primary nanoparticles predominantly made up of individual crystallites and in a high-aspect ratio nematic-forming thin-wall nanotube system. The nano-micro orientation propagation is attributed to differences in the elongation and breakage of mesophase domains.
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Affiliation(s)
- Reza Ghanbari
- Department of Industrial and Materials Science, Division of Engineering MaterialsChalmers University of TechnologyGothenburgSE‐412 96Sweden
- MAX IV LaboratoryLund UniversityLundSE‐224 84Sweden
- Present address:
NKT Technology ConsultingVästerÄsSweden
| | - Ann Terry
- MAX IV LaboratoryLund UniversityLundSE‐224 84Sweden
- LINXS Institute of advanced Neutron and X‐ray Science (LINXS)Scheelevägen 19Lund223 70Sweden
| | - Sylwia Wojno
- Department of Industrial and Materials Science, Division of Engineering MaterialsChalmers University of TechnologyGothenburgSE‐412 96Sweden
- Wallenberg Wood Science Centre (WWSC)Chalmers University of TechnologyGothenburgSE‐412 96Sweden
| | - Marko Bek
- Department of Industrial and Materials Science, Division of Engineering MaterialsChalmers University of TechnologyGothenburgSE‐412 96Sweden
- LINXS Institute of advanced Neutron and X‐ray Science (LINXS)Scheelevägen 19Lund223 70Sweden
| | - Kesavan Sekar
- Department of Industrial and Materials Science, Division of Engineering MaterialsChalmers University of TechnologyGothenburgSE‐412 96Sweden
- Wallenberg Wood Science Centre (WWSC)Chalmers University of TechnologyGothenburgSE‐412 96Sweden
| | - Amit Kumar Sonker
- Department of Industrial and Materials Science, Division of Engineering MaterialsChalmers University of TechnologyGothenburgSE‐412 96Sweden
- Wallenberg Wood Science Centre (WWSC)Chalmers University of TechnologyGothenburgSE‐412 96Sweden
- Present address:
VTT Technical research center of FinlandBiomaterial processing and productsTietotie 4EEspoo02150Finland
| | - Kim Nygård
- MAX IV LaboratoryLund UniversityLundSE‐224 84Sweden
- LINXS Institute of advanced Neutron and X‐ray Science (LINXS)Scheelevägen 19Lund223 70Sweden
| | - Viney Ghai
- Department of Industrial and Materials Science, Division of Engineering MaterialsChalmers University of TechnologyGothenburgSE‐412 96Sweden
| | - Simona Bianco
- School of ChemistryUniversity of GlasgowGlasgowG12 8QQUK
| | - Marianne Liebi
- Department of Physics, Division of Materials PhysicsChalmers University of TechnologyGothenburgSE‐412 96Sweden
- Paul Scherrer InstituteDivision of Photon ScienceVilligenCH‐5232Switzerland
- Institute of MaterialsEcole Polytechnique Fédérale de Lausanne (EPFL)LausanneCH‐1015Switzerland
| | - Aleksandar Matic
- LINXS Institute of advanced Neutron and X‐ray Science (LINXS)Scheelevägen 19Lund223 70Sweden
- Department of Physics, Division of Materials PhysicsChalmers University of TechnologyGothenburgSE‐412 96Sweden
| | - Gunnar Westman
- LINXS Institute of advanced Neutron and X‐ray Science (LINXS)Scheelevägen 19Lund223 70Sweden
- Department of Chemistry and Chemical Engineering, Division of Organic ChemistryChalmers University of TechnologyGothenburgSE‐412 96Sweden
| | - Tiina Nypelö
- LINXS Institute of advanced Neutron and X‐ray Science (LINXS)Scheelevägen 19Lund223 70Sweden
- Wallenberg Wood Science Centre (WWSC)Chalmers University of TechnologyGothenburgSE‐412 96Sweden
- Department of Chemistry and Chemical Engineering, Division of Applied ChemistryChalmers University of TechnologyGothenburgSE‐412 96Sweden
- Department of Bioproducts and BiosystemsAalto UniversityEspooFI‐00760Finland
| | - Roland Kádár
- Department of Industrial and Materials Science, Division of Engineering MaterialsChalmers University of TechnologyGothenburgSE‐412 96Sweden
- MAX IV LaboratoryLund UniversityLundSE‐224 84Sweden
- LINXS Institute of advanced Neutron and X‐ray Science (LINXS)Scheelevägen 19Lund223 70Sweden
- Wallenberg Wood Science Centre (WWSC)Chalmers University of TechnologyGothenburgSE‐412 96Sweden
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6
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van Riessen GA, Hinsley GN, Kewish CM, van Riessen A. Visualising Geopolymerisation Processes Using Scanning X-Ray Diffraction and Fluorescence Microscopy. MATERIALS (BASEL, SWITZERLAND) 2024; 17:5896. [PMID: 39685332 DOI: 10.3390/ma17235896] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2024] [Revised: 11/26/2024] [Accepted: 11/29/2024] [Indexed: 12/18/2024]
Abstract
In situ observation of the dissolution of metakaolin followed by the condensation of geopolymer was performed by a combination of synchrotron X-ray fluorescence microscopy and scanning X-ray diffraction microscopy. New insight into the complex geopolymerisation process was obtained by simultaneously acquiring compositional and morphological information. The combination of selected alkali and experimental conditions produced a geopolymer with the targeted composition but resulted in the complete and rapid dissolution of metakaolin followed by immediate geopolymer formation. The geopolymer microstructure continued to evolve, along with pore growth, over several hours.
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Affiliation(s)
- Grant A van Riessen
- Department of Mathematical and Physical Sciences, School of Computing, Engineering and Mathematical Sciences, La Trobe University, Bundoora, VIC 3086, Australia
| | - Gerard N Hinsley
- Department of Mathematical and Physical Sciences, School of Computing, Engineering and Mathematical Sciences, La Trobe University, Bundoora, VIC 3086, Australia
- Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, D-22607 Hamburg, Germany
| | - Cameron M Kewish
- Department of Mathematical and Physical Sciences, School of Computing, Engineering and Mathematical Sciences, La Trobe University, Bundoora, VIC 3086, Australia
- Australian Nuclear Science and Technology Organisation, Australian Synchrotron, Clayton, VIC 3168, Australia
| | - Arie van Riessen
- John de Laeter Centre, Curtin University Australia, Perth, WA 6845, Australia
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7
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Warren AJ, Trincao J, Crawshaw AD, Beale EV, Duller G, Stallwood A, Lunnon M, Littlewood R, Prescott A, Foster A, Smith N, Rehm G, Gayadeen S, Bloomer C, Alianelli L, Laundy D, Sutter J, Cahill L, Evans G. VMXm - A sub-micron focus macromolecular crystallography beamline at Diamond Light Source. JOURNAL OF SYNCHROTRON RADIATION 2024; 31:1593-1608. [PMID: 39475835 PMCID: PMC11542661 DOI: 10.1107/s1600577524009160] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Accepted: 09/18/2024] [Indexed: 11/08/2024]
Abstract
VMXm joins the suite of operational macromolecular crystallography beamlines at Diamond Light Source. It has been designed to optimize rotation data collections from protein crystals less than 10 µm and down to below 1 µm in size. The beamline has a fully focused beam of 0.3 × 2.3 µm (vertical × horizontal) with a tuneable energy range (6-28 keV) and high flux (1.6 × 1012 photons s-1 at 12.5 keV). The crystals are housed within a vacuum chamber to minimize background scatter from air. Crystals are plunge-cooled on cryo-electron microscopy grids, allowing much of the liquid surrounding the crystals to be removed. These factors improve the signal-to-noise during data collection and the lifetime of the microcrystals can be prolonged by exploiting photoelectron escape. A novel in vacuo sample environment has been designed which also houses a scanning electron microscope to aid with sample visualization. This combination of features at VMXm allows measurements at the physical limits of X-ray crystallography on biomacromolecules to be explored and exploited.
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Affiliation(s)
- Anna J. Warren
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Jose Trincao
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Adam D. Crawshaw
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Emma V. Beale
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
- Paul Scherrer InstitutForschungsstrasse 111 5232 Villigen PSISwitzerland
| | - Graham Duller
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Andrew Stallwood
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
- Rosalind Franklin InstituteRutherford Appleton LaboratoryHarwell CampusDidcotOxfordshireOX11 0QXUnited Kingdom
| | - Mark Lunnon
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Richard Littlewood
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Adam Prescott
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Andrew Foster
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Neil Smith
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Guenther Rehm
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
- Helmholtz-Zentrum BerlinHahn-Meitner-Platz 1 14109 BerlinGermany
| | - Sandira Gayadeen
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Christopher Bloomer
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Lucia Alianelli
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - David Laundy
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - John Sutter
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Leo Cahill
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
| | - Gwyndaf Evans
- Diamond Light SourceHarwell Science and Innovation CampusDidcotOxfordshireOX11 0DEUnited Kingdom
- Rosalind Franklin InstituteRutherford Appleton LaboratoryHarwell CampusDidcotOxfordshireOX11 0QXUnited Kingdom
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8
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Hinsley GN, Westermeier F, Wang B, Ngoi KH, Singh S, Rysov R, Sprung M, Kewish CM, van Riessen GA, Vartanyants IA. Dynamic X-ray Coherent Diffraction Analysis: Bridging the Time Scales between Imaging and Photon Correlation Spectroscopy. NANO LETTERS 2024; 24:13702-13707. [PMID: 39423316 PMCID: PMC11528431 DOI: 10.1021/acs.nanolett.4c03699] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2024] [Revised: 10/09/2024] [Accepted: 10/09/2024] [Indexed: 10/21/2024]
Abstract
The advent of diffraction limited sources and developments in detector technology opens up new possibilities for the study of materials in situ and operando. Coherent X-ray diffraction techniques such as coherent X-ray diffractive imaging (CXDI) and X-ray photon correlation spectroscopy (XPCS) are capable for this purpose and provide complementary information, although due to signal-to-noise requirements, their simultaneous demonstration has been limited. Here, we demonstrate a strategy for the simultaneous use of CXDI and XPCS to study in situ the Brownian motion of colloidal gold nanoparticles of 200 nm diameter suspended in a glycerol-water mixture. We visualize the process of agglomeration, examine the spatiotemporal space accessible with the combination of techniques, and demonstrate CXDI with 22 ms temporal resolution.
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Affiliation(s)
- Gerard N. Hinsley
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, Hamburg 22607, Germany
| | - Fabian Westermeier
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, Hamburg 22607, Germany
| | - Bihan Wang
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, Hamburg 22607, Germany
- Center
for Transformative Science, Shanghai Technical
University, Shanghai 201210, China
| | - Kuan Hoon Ngoi
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, Hamburg 22607, Germany
| | - Shweta Singh
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, Hamburg 22607, Germany
| | - Rustam Rysov
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, Hamburg 22607, Germany
| | - Michael Sprung
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, Hamburg 22607, Germany
| | - Cameron M. Kewish
- Australian
Nuclear Science and Technology Organisation, Australian Synchrotron, Victoria 3168, Australia
- Department
of Mathematical and Physical Sciences, La
Trobe University, Bundoora, Victoria 3086, Australia
| | - Grant A. van Riessen
- Department
of Mathematical and Physical Sciences, La
Trobe University, Bundoora, Victoria 3086, Australia
- Melbourne
Centre for Nanofabrication, Clayton, Victoria 3168, Australia
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9
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Klureza MA, Pulnova Y, von Stetten D, Owen RL, Beddard GS, Pearson AR, Yorke BA. Multiplexing methods in dynamic protein crystallography. Methods Enzymol 2024; 709:177-206. [PMID: 39608944 DOI: 10.1016/bs.mie.2024.10.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2024]
Abstract
Time-resolved X-ray crystallography experiments were first performed in the 1980s, yet they remained a niche technique for decades. With the recent advent of X-ray free electron laser (XFEL) sources and serial crystallographic techniques, time-resolved crystallography has received renewed interest and has become more accessible to a wider user base. Despite this, time-resolved structures represent < 1 % of models deposited in the world-wide Protein Data Bank, indicating that the tools and techniques currently available require further development before such experiments can become truly routine. In this chapter, we demonstrate how applying data multiplexing to time-resolved crystallography can enhance the achievable time resolution at moderately intense monochromatic X-ray sources, ranging from synchrotrons to bench-top sources. We discuss the principles of multiplexing, where this technique may be advantageous, potential pitfalls, and experimental design considerations.
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Affiliation(s)
- Margaret A Klureza
- Institute for Nanostructure and Solid State Physics, University of Hamburg, HARBOR, Hamburg, Germany
| | | | | | - Robin L Owen
- Diamond Light Source Ltd, Harwell Science and Innovation, Campus, Didcot, Oxfordshire, United Kingdom
| | - Godfrey S Beddard
- School of Chemistry, University of Edinburgh, David Brewster Road, United Kingdom; School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, United Kingdom
| | - Arwen R Pearson
- Institute for Nanostructure and Solid State Physics, University of Hamburg, HARBOR, Hamburg, Germany
| | - Briony A Yorke
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, United Kingdom.
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10
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Magkakis K, Orädd F, Ahn B, Da Silva V, Appio R, Plivelic TS, Andersson M. Real-time structural characterization of protein response to a caged compound by fast detector readout and high-brilliance synchrotron radiation. Structure 2024; 32:1519-1527.e3. [PMID: 38889721 DOI: 10.1016/j.str.2024.05.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Revised: 04/19/2024] [Accepted: 05/22/2024] [Indexed: 06/20/2024]
Abstract
Protein dynamics are essential to biological function, and methods to determine such structural rearrangements constitute a frontier in structural biology. Synchrotron radiation can track real-time protein dynamics, but accessibility to dedicated high-flux single X-ray pulse time-resolved beamlines is scarce and protein targets amendable to such characterization are limited. These limitations can be alleviated by triggering the reaction by laser-induced activation of a caged compound and probing the structural dynamics by fast-readout detectors. In this work, we established time-resolved X-ray solution scattering (TR-XSS) at the CoSAXS beamline at the MAX IV Laboratory synchrotron. Laser-induced activation of caged ATP initiated phosphoryl transfer in the adenylate kinase (AdK) enzyme, and the reaction was monitored up to 50 ms with a 2-ms temporal resolution achieved by the detector readout. The time-resolved structural signal of the protein showed minimal radiation damage effects and excellent agreement to data collected by a single X-ray pulse approach.
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Affiliation(s)
| | - Fredrik Orädd
- Department of Chemistry, Umeå University, Umeå, Sweden
| | - Byungnam Ahn
- MAX IV Laboratory, Lund University, Lund, Sweden
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11
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Jastrzębska R, Poręba T, Cova F, Tchoń DM, Makal A. Structure-property relationship of a complex photoluminescent arylacetylide-gold(I) compound. I: a pressure-induced phase transformation caught in the act. IUCRJ 2024; 11:737-743. [PMID: 39178065 PMCID: PMC11364033 DOI: 10.1107/s2052252524007681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2024] [Accepted: 08/04/2024] [Indexed: 08/25/2024]
Abstract
A pressure-induced triclinic-to-monoclinic phase transition has been caught `in the act' over a wider series of high-pressure synchrotron diffraction experiments conducted on a large, photoluminescent organo-gold(I) compound. Here, we describe the mechanism of this single-crystal-to-single-crystal phase transition, the onset of which occurs at ∼0.6 GPa, and we report a high-quality structure of the new monoclinic phase, refined using aspherical atomic scattering factors. Our case illustrates how conducting a fast series of diffraction experiments, enabled by modern equipment at synchrotron facilities, can lead to overestimation of the actual pressure of a phase transition due to slow transformation kinetics.
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Affiliation(s)
- Róża Jastrzębska
- Biological and Chemical Research Centre, Faculty of ChemistryUniversity of WarsawŻwirki i Wigury 10102-089WarszawaPoland
| | - Tomasz Poręba
- Laboratory for Quantum Magnetism, École Polytechnique Fédérale de Lausanne, CH-1015Lausanne, Switzerland
| | - Federico Cova
- ALBA Synchrotron BL31-FaXToR, Cerdanyola del Vallés, Cataluña, Spain
| | - Daniel M. Tchoń
- Biological and Chemical Research Centre, Faculty of ChemistryUniversity of WarsawŻwirki i Wigury 10102-089WarszawaPoland
- Molecular Biophysics and Integrated Bioimaging DivisionLawrence Berkeley National Laboratory,1 Cyclotron RoadBerkeleyCA 94720USA
| | - Anna Makal
- Biological and Chemical Research Centre, Faculty of ChemistryUniversity of WarsawŻwirki i Wigury 10102-089WarszawaPoland
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12
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Banerjee S, Gürsoy D, Deng J, Kahnt M, Kramer M, Lynn M, Haskel D, Strempfer J. 3D imaging of magnetic domains in Nd 2Fe 14B using scanning hard X-ray nanotomography. JOURNAL OF SYNCHROTRON RADIATION 2024; 31:877-887. [PMID: 38771778 PMCID: PMC11226165 DOI: 10.1107/s1600577524003217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2024] [Accepted: 04/15/2024] [Indexed: 05/23/2024]
Abstract
Nanoscale structural and electronic heterogeneities are prevalent in condensed matter physics. Investigating these heterogeneities in 3D has become an important task for understanding material properties. To provide a tool to unravel the connection between nanoscale heterogeneity and macroscopic emergent properties in magnetic materials, scanning transmission X-ray microscopy (STXM) is combined with X-ray magnetic circular dichroism. A vector tomography algorithm has been developed to reconstruct the full 3D magnetic vector field without any prior noise assumptions or knowledge about the sample. Two tomographic scans around the vertical axis are acquired on single-crystalline Nd2Fe14B pillars tilted at two different angles, with 2D STXM projections recorded using a focused 120 nm X-ray beam with left and right circular polarization. Image alignment and iterative registration have been implemented based on the 2D STXM projections for the two tilts. Dichroic projections obtained from difference images are used for the tomographic reconstruction to obtain the 3D magnetization distribution at the nanoscale.
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Affiliation(s)
| | - Doğa Gürsoy
- X-ray Science DivisionArgonne National LaboratoryLemontIL60439USA
| | - Junjing Deng
- X-ray Science DivisionArgonne National LaboratoryLemontIL60439USA
| | - Maik Kahnt
- MAX IV LaboratoryLund University22100LundSweden
| | | | | | - Daniel Haskel
- X-ray Science DivisionArgonne National LaboratoryLemontIL60439USA
| | - Jörg Strempfer
- X-ray Science DivisionArgonne National LaboratoryLemontIL60439USA
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13
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Åstrand M, Kahnt M, Johansson U, Vogt U. Adaptive multi-beam X-ray ptychography. OPTICS EXPRESS 2024; 32:22771-22780. [PMID: 39538756 DOI: 10.1364/oe.509813] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Accepted: 04/23/2024] [Indexed: 11/16/2024]
Abstract
Ptychography has evolved as an important method for nanoscale X-ray imaging with synchrotron radiation. Recently, it has been proposed to work with multiple beams in parallel. The main advantage of so-called multi-beam ptychography is that larger areas can be imaged much faster than with a conventional single beam scan. We introduce adaptive multi-beam ptychography performed with two Fresnel zone plates, placed one behind the other. In contrast to previous demonstrations of multi-beam ptychography, our optical scheme allows for adapting the spatial beam separation to the needs of the sample under investigation, relaxes thickness requirements on zone plates and is straightforward to implement. Moreover, it is simple to switch between single and multi-beam illumination during the same experiment. This opens the possibility of combining large and fast overview scans with detailed imaging of certain regions of interests.
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14
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Narayanan T. Recent advances in synchrotron scattering methods for probing the structure and dynamics of colloids. Adv Colloid Interface Sci 2024; 325:103114. [PMID: 38452431 DOI: 10.1016/j.cis.2024.103114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 02/07/2024] [Accepted: 02/14/2024] [Indexed: 03/09/2024]
Abstract
Recent progress in synchrotron based X-ray scattering methods applied to colloid science is reviewed. An important figure of merit of these techniques is that they enable in situ investigations of colloidal systems under the desired thermophysical and rheological conditions. An ensemble averaged simultaneous structural and dynamical information can be derived albeit in reciprocal space. Significant improvements in X-ray source brilliance and advances in detector technology have overcome some of the limitations in the past. Notably coherent X-ray scattering techniques have become more competitive and they provide complementary information to laboratory based real space methods. For a system with sufficient scattering contrast, size ranges from nm to several μm and time scales down to μs are now amenable to X-ray scattering investigations. A wide variety of sample environments can be combined with scattering experiments further enriching the science that could be pursued by means of advanced X-ray scattering instruments. Some of these recent progresses are illustrated via representative examples. To derive quantitative information from the scattering data, rigorous data analysis or modeling is required. Development of powerful computational tools including the use of artificial intelligence have become the emerging trend.
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15
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Nygård K, McDonald SA, González JB, Haghighat V, Appel C, Larsson E, Ghanbari R, Viljanen M, Silva J, Malki S, Li Y, Silva V, Weninger C, Engelmann F, Jeppsson T, Felcsuti G, Rosén T, Gordeyeva K, Söderberg L, Dierks H, Zhang Y, Yao Z, Yang R, Asimakopoulou EM, Rogalinski J, Wallentin J, Villanueva-Perez P, Krüger R, Dreier T, Bech M, Liebi M, Bek M, Kádár R, Terry AE, Tarawneh H, Ilinski P, Malmqvist J, Cerenius Y. ForMAX - a beamline for multiscale and multimodal structural characterization of hierarchical materials. JOURNAL OF SYNCHROTRON RADIATION 2024; 31:363-377. [PMID: 38386565 PMCID: PMC10914163 DOI: 10.1107/s1600577524001048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Accepted: 01/30/2024] [Indexed: 02/24/2024]
Abstract
The ForMAX beamline at the MAX IV Laboratory provides multiscale and multimodal structural characterization of hierarchical materials in the nanometre to millimetre range by combining small- and wide-angle X-ray scattering with full-field microtomography. The modular design of the beamline is optimized for easy switching between different experimental modalities. The beamline has a special focus on the development of novel fibrous materials from forest resources, but it is also well suited for studies within, for example, food science and biomedical research.
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Affiliation(s)
- K. Nygård
- MAX IV Laboratory, Lund University, Lund, Sweden
| | | | | | - V. Haghighat
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - C. Appel
- MAX IV Laboratory, Lund University, Lund, Sweden
- Paul Scherrer Institut, Villigen PSI, Switzerland
| | - E. Larsson
- MAX IV Laboratory, Lund University, Lund, Sweden
- Division of Solid Mechanics, Lund University, Lund, Sweden
| | - R. Ghanbari
- MAX IV Laboratory, Lund University, Lund, Sweden
- Department of Industrial and Materials Science, Chalmers University of Technology, Gothenburg, Sweden
| | - M. Viljanen
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - J. Silva
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - S. Malki
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - Y. Li
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - V. Silva
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - C. Weninger
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - F. Engelmann
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - T. Jeppsson
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - G. Felcsuti
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - T. Rosén
- Department of Fibre and Polymer Technology, Royal Institute of Technology, Stockholm, Sweden
- Wallenberg Wood Science Center (WWSC), Royal Institute of Technology, Stockholm, Sweden
| | - K. Gordeyeva
- Department of Fibre and Polymer Technology, Royal Institute of Technology, Stockholm, Sweden
| | - L. D. Söderberg
- Department of Fibre and Polymer Technology, Royal Institute of Technology, Stockholm, Sweden
- Wallenberg Wood Science Center (WWSC), Royal Institute of Technology, Stockholm, Sweden
| | - H. Dierks
- Synchrotron Radiation Research, Lund University, Lund, Sweden
| | - Y. Zhang
- Synchrotron Radiation Research, Lund University, Lund, Sweden
| | - Z. Yao
- Synchrotron Radiation Research, Lund University, Lund, Sweden
| | - R. Yang
- Synchrotron Radiation Research, Lund University, Lund, Sweden
| | | | | | - J. Wallentin
- Synchrotron Radiation Research, Lund University, Lund, Sweden
| | | | - R. Krüger
- Medical Radiation Physics, Lund University, Lund, Sweden
| | - T. Dreier
- Medical Radiation Physics, Lund University, Lund, Sweden
- Excillum AB, Kista, Sweden
| | - M. Bech
- Medical Radiation Physics, Lund University, Lund, Sweden
| | - M. Liebi
- Paul Scherrer Institut, Villigen PSI, Switzerland
- Institute of Materials, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
- Department of Physics, Chalmers University of Technology, Gothenburg, Sweden
| | - M. Bek
- Department of Industrial and Materials Science, Chalmers University of Technology, Gothenburg, Sweden
- FibRe-Centre for Lignocellulose-based Thermoplastics, Department of Chemistry and Chemical Engineering, Chalmers University of Technology, Gothenburg, Sweden
| | - R. Kádár
- MAX IV Laboratory, Lund University, Lund, Sweden
- Department of Industrial and Materials Science, Chalmers University of Technology, Gothenburg, Sweden
- FibRe-Centre for Lignocellulose-based Thermoplastics, Department of Chemistry and Chemical Engineering, Chalmers University of Technology, Gothenburg, Sweden
- Wallenberg Wood Science Center (WWSC), Chalmers University of Technology, Gothenburg, Sweden
| | - A. E. Terry
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - H. Tarawneh
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - P. Ilinski
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - J. Malmqvist
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - Y. Cerenius
- MAX IV Laboratory, Lund University, Lund, Sweden
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16
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Krause L, Gjørup FH, Jørgensen MRV. xrdPlanner: exploring area detector geometries for powder diffraction and total scattering experiments. JOURNAL OF SYNCHROTRON RADIATION 2024; 31:394-398. [PMID: 38306298 PMCID: PMC10914179 DOI: 10.1107/s1600577523011086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Accepted: 12/27/2023] [Indexed: 02/04/2024]
Abstract
xrdPlanner is a software package designed to aid in the planning and preparation of powder X-ray diffraction and total scattering beam times at synchrotron facilities. Many modern beamlines provide a flexible experimental setup and may have several different detectors available. In combination with a range of available X-ray energies, it often makes it difficult for the user to explore the available parameter space relevant for a given experiment prior to the scheduled beam time. xrdPlanner was developed to provide a fast and straightforward tool that allows users to visualize the accessible part of reciprocal space of their experiment at a given combination of photon energy and detector geometry. To plan and communicate the necessary geometry not only saves time but also helps the beamline staff to prepare and accommodate for an experiment. The program is tailored toward powder X-ray diffraction and total scattering experiments but may also be useful for other experiments that rely on an area detector and for which detector placement and achievable momentum-transfer range are important experimental parameters.
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Affiliation(s)
- Lennard Krause
- Department of Chemistry, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
- MAX IV Laboratory, Lund University, Fotongatan 2, 225 94 Lund, Sweden
| | - Frederik Holm Gjørup
- Department of Chemistry, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
- MAX IV Laboratory, Lund University, Fotongatan 2, 225 94 Lund, Sweden
- iNANO, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
| | - Mads Ry Vogel Jørgensen
- Department of Chemistry, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
- MAX IV Laboratory, Lund University, Fotongatan 2, 225 94 Lund, Sweden
- iNANO, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
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17
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Chèvremont W, Zinn T, Narayanan T. Improvement of ultra-small-angle XPCS with the Extremely Brilliant Source. JOURNAL OF SYNCHROTRON RADIATION 2024; 31:65-76. [PMID: 37933847 PMCID: PMC10833426 DOI: 10.1107/s1600577523008627] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 10/01/2023] [Indexed: 11/08/2023]
Abstract
Recent technical developments and the performance of the X-ray photon correlation spectroscopy (XPCS) method over the ultra-small-angle range with the Extremely Brilliant Source (EBS) at the ESRF are described. With higher monochromatic coherent photon flux (∼1012 photons s-1) provided by the EBS and the availability of a fast pixel array detector (EIGER 500K detector operating at 23000 frames s-1), XPCS has become more competitive for probing faster dynamics in relatively dilute suspensions. One of the goals of the present development is to increase the user-friendliness of the method. This is achieved by means of a Python-based graphical user interface that enables online visualization and analysis of the processed data. The improved performance of XPCS on the Time-Resolved Ultra-Small-Angle X-ray Scattering instrument (ID02 beamline) is demonstrated using dilute model colloidal suspensions in several different applications.
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Affiliation(s)
- William Chèvremont
- ESRF – The European Synchrotron, 71 Avenue des Martyrs, 38043 Grenoble, France
| | - Thomas Zinn
- ESRF – The European Synchrotron, 71 Avenue des Martyrs, 38043 Grenoble, France
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18
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Reinle-Schmitt M, Šišak Jung D, Morin M, Costa F, Casati N, Gozzo F. Exploring high-throughput synchrotron X-Ray powder diffraction for the structural analysis of pharmaceuticals. Int J Pharm X 2023; 6:100221. [PMID: 38146324 PMCID: PMC10749245 DOI: 10.1016/j.ijpx.2023.100221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 11/20/2023] [Accepted: 11/27/2023] [Indexed: 12/27/2023] Open
Abstract
Synchrotron radiation offers a host of advanced properties, surpassing conventional laboratory sources with its high brightness, tunable phonon energy, photon beam coherence for advanced X-ray imaging, and a structured time profile, ideal for capturing dynamic atomic and molecular processes. However, these benefits come at the cost of operational complexity and expenses. Three decades ago, synchrotron radiation facilities, while technically open to all scientists, primarily served a limited community. Despite substantial accessibility improvements over the past two decades, synchrotron measurements still do not qualify as routine analyses. The intrinsic complexity of synchrotron science means experiments are pursued only when no alternatives suffice. In recent years, strides have been made in technology transfer offices, intermediate synchrotron-based analytical service companies, and the development of high-throughput synchrotron systems at various facilities, reshaping the perception of synchrotron science. This article investigates the practical application of synchrotron X-Ray Powder Diffraction (s-XRPD) techniques in pharmaceutical analysis. By utilizing concrete examples, we demonstrate how high-throughput systems have the potential to revolutionize s-XRPD applications in the pharmaceutical industry, rapidly generating XRPD patterns of comparable or superior quality to those obtained in state-of-the-art laboratory XRPD, all in less than 5 s. Additional cases featuring well-established pharmaceutical active ingredients (API) and excipients substantiate the concept of high throughput in pharmaceuticals, affirming data quality through structural refinements aligned with literature-derived unit cell parameters. Synchrotron data need not always be state-of-the-art to compete with lab-XRPD data. The key lies in ensuring user-friendliness, reproducibility, accessibility, cost-effectiveness, and the streamlined efforts associated with synchrotron instrumentation to remain highly competitive with their laboratory counterparts.
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Affiliation(s)
- M. Reinle-Schmitt
- Excelsus Structural Solutions (Swiss) AG, PARK INNOVAARE, 5234 Villigen, Switzerland
| | - D. Šišak Jung
- DECTRIS, Täfernweg 1, 5405 Baden-Dättwil, Switzerland
| | - M. Morin
- Excelsus Structural Solutions (Swiss) AG, PARK INNOVAARE, 5234 Villigen, Switzerland
| | - F.N. Costa
- Excelsus Structural Solutions (Swiss) AG, PARK INNOVAARE, 5234 Villigen, Switzerland
| | - N. Casati
- Paul Scherrer Institute, Forschungsstrasse 111, 5232 Villigen PSI, Switzerland
| | - F. Gozzo
- Excelsus Structural Solutions (Swiss) AG, PARK INNOVAARE, 5234 Villigen, Switzerland
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19
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Raviv U, Asor R, Shemesh A, Ginsburg A, Ben-Nun T, Schilt Y, Levartovsky Y, Ringel I. Insight into structural biophysics from solution X-ray scattering. J Struct Biol 2023; 215:108029. [PMID: 37741561 DOI: 10.1016/j.jsb.2023.108029] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2023] [Revised: 08/09/2023] [Accepted: 09/18/2023] [Indexed: 09/25/2023]
Abstract
The current challenges of structural biophysics include determining the structure of large self-assembled complexes, resolving the structure of ensembles of complex structures and their mass fraction, and unraveling the dynamic pathways and mechanisms leading to the formation of complex structures from their subunits. Modern synchrotron solution X-ray scattering data enable simultaneous high-spatial and high-temporal structural data required to address the current challenges of structural biophysics. These data are complementary to crystallography, NMR, and cryo-TEM data. However, the analysis of solution scattering data is challenging; hence many different analysis tools, listed in the SAS Portal (http://smallangle.org/), were developed. In this review, we start by briefly summarizing classical X-ray scattering analyses providing insight into fundamental structural and interaction parameters. We then describe recent developments, integrating simulations, theory, and advanced X-ray scattering modeling, providing unique insights into the structure, energetics, and dynamics of self-assembled complexes. The structural information is essential for understanding the underlying physical chemistry principles leading to self-assembled supramolecular architectures and computational structural refinement.
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Affiliation(s)
- Uri Raviv
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 9190401, Israel; The Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 9190401, Israel.
| | - Roi Asor
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 9190401, Israel
| | - Asaf Shemesh
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 9190401, Israel
| | - Avi Ginsburg
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 9190401, Israel
| | - Tal Ben-Nun
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 9190401, Israel
| | - Yaelle Schilt
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 9190401, Israel
| | - Yehonatan Levartovsky
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 9190401, Israel
| | - Israel Ringel
- Institute for Drug Research, School of Pharmacy, The Hebrew University of Jerusalem, 9112102 Jerusalem, Israel
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20
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Fitch A, Dejoie C, Covacci E, Confalonieri G, Grendal O, Claustre L, Guillou P, Kieffer J, de Nolf W, Petitdemange S, Ruat M, Watier Y. ID22 - the high-resolution powder-diffraction beamline at ESRF. JOURNAL OF SYNCHROTRON RADIATION 2023; 30:1003-1012. [PMID: 37462688 PMCID: PMC10481261 DOI: 10.1107/s1600577523004915] [Citation(s) in RCA: 24] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Accepted: 06/05/2023] [Indexed: 09/07/2023]
Abstract
Following Phase 2 of the upgrade of the ESRF in which the storage ring was replaced by a new low-emittance ring along with many other facility upgrades, the status of ID22, the high-resolution powder-diffraction beamline, is described. The beamline has an in-vacuum undulator as source providing X-rays in the range 6-75 keV. ID22's principle characteristics include very high angular resolution as a result of the highly collimated and monochromatic beam, coupled with a 13-channel Si 111 multi-analyser stage between the sample and a Dectris Eiger2 X 2M-W CdTe pixel detector. The detector's axial resolution allows recorded 2θ values to be automatically corrected for the effects of axial divergence, resulting in narrower and more-symmetric peaks compared with the previous fixed-axial-slit arrangement. The axial acceptance can also be increased with increasing diffraction angle, thus simultaneously improving the statistical quality of high-angle data. A complementary Perkin Elmer XRD1611 medical-imaging detector is available for faster, lower-resolution data, often used at photon energies of 60-70 keV for pair-distribution function analysis, although this is also possible in high-resolution mode by scanning up to 120° 2θ at 35 keV. There are various sample environments, allowing sample temperatures from 4 K to 1600°C, a capillary cell for non-corrosive gas atmospheres in the range 0-100 bar, and a sample-changing robot that can accommodate 75 capillary samples compatible with the temperature range 80 K to 950°C.
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Affiliation(s)
- Andrew Fitch
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | - Catherine Dejoie
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | - Ezio Covacci
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | | | - Ola Grendal
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | - Laurent Claustre
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | - Perceval Guillou
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | - Jérôme Kieffer
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | - Wout de Nolf
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | | | - Marie Ruat
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
| | - Yves Watier
- ESRF, 71 Avenue des Martyrs, CS40220, 38043 Grenoble Cedex 9, France
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Naumenko D, Burian M, Marmiroli B, Haider R, Radeticchio A, Wagner L, Piazza L, Glatt L, Brandstetter S, Dal Zilio S, Biasiol G, Amenitsch H. Implication of the double-gating mode in a hybrid photon counting detector for measurements of transient heat conduction in GaAs/AlAs superlattice structures. J Appl Crystallogr 2023; 56:961-966. [PMID: 37555215 PMCID: PMC10405594 DOI: 10.1107/s1600576723004302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Accepted: 05/17/2023] [Indexed: 08/10/2023] Open
Abstract
Understanding and control of thermal transport in solids at the nanoscale are crucial in engineering and enhance the properties of a new generation of optoelectronic, thermoelectric and photonic devices. In this regard, semiconductor superlattice structures provide a unique platform to study phenomena associated with phonon propagations in solids such as heat conduction. Transient X-ray diffraction can directly probe atomic motions and therefore is among the rare techniques sensitive to phonon dynamics in condensed matter. Here, optically induced transient heat conduction in GaAs/AlAs superlattice structures is studied using the EIGER2 detector. Benchmark experiments have been performed at the Austrian SAXS beamline at Elettra-Sincrotrone Trieste operated in the hybrid filling mode. This work demonstrates that drifts of experimental conditions, such as synchrotron beam fluctuations, become less essential when utilizing the EIGER2 double-gating mode which results in a faster acquisition of high-quality data and facilitates data analysis and data interpretation.
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Affiliation(s)
- Denys Naumenko
- Institute of Inorganic Chemistry, Graz University of Technology, Stremayrgasse 9/IV, Graz 8010, Austria
| | - Max Burian
- Institute of Inorganic Chemistry, Graz University of Technology, Stremayrgasse 9/IV, Graz 8010, Austria
- DECTRIS Ltd, Taefernweg 1, Baden-Daettwil 5405, Switzerland
| | - Benedetta Marmiroli
- Institute of Inorganic Chemistry, Graz University of Technology, Stremayrgasse 9/IV, Graz 8010, Austria
| | - Richard Haider
- Institute of Inorganic Chemistry, Graz University of Technology, Stremayrgasse 9/IV, Graz 8010, Austria
| | - Andrea Radeticchio
- Institute of Inorganic Chemistry, Graz University of Technology, Stremayrgasse 9/IV, Graz 8010, Austria
| | - Lucas Wagner
- DECTRIS Ltd, Taefernweg 1, Baden-Daettwil 5405, Switzerland
| | - Luca Piazza
- DECTRIS Ltd, Taefernweg 1, Baden-Daettwil 5405, Switzerland
| | - Lisa Glatt
- DECTRIS Ltd, Taefernweg 1, Baden-Daettwil 5405, Switzerland
| | | | - Simone Dal Zilio
- CNR-IOM – Istituto Officina dei Materiali, SS 14, km 163.5, Basovizza (Trieste) 34149, Italy
| | - Giorgio Biasiol
- CNR-IOM – Istituto Officina dei Materiali, SS 14, km 163.5, Basovizza (Trieste) 34149, Italy
| | - Heinz Amenitsch
- Institute of Inorganic Chemistry, Graz University of Technology, Stremayrgasse 9/IV, Graz 8010, Austria
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