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Gaya HE, Cooper RJ, Delancey CD, Hepinstall-Cymerman J, Kurimo-Beechuk EA, Lewis WB, Merker SA, Chandler RB. Clinging to the top: natal dispersal tracks climate gradient in a trailing-edge population of a migratory songbird. MOVEMENT ECOLOGY 2024; 12:28. [PMID: 38627871 PMCID: PMC11020467 DOI: 10.1186/s40462-024-00470-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Accepted: 04/08/2024] [Indexed: 04/20/2024]
Abstract
PURPOSE Trailing-edge populations at the low-latitude, receding edge of a shifting range face high extinction risk from climate change unless they are able to track optimal environmental conditions through dispersal. METHODS We fit dispersal models to the locations of 3165 individually-marked black-throated blue warblers (Setophaga caerulescens) in the southern Appalachian Mountains in North Carolina, USA from 2002 to 2023. Black-throated blue warbler breeding abundance in this population has remained relatively stable at colder and wetter areas at higher elevations but has declined at warmer and drier areas at lower elevations. RESULTS Median dispersal distance of young warblers was 917 m (range 23-3200 m), and dispersal tended to be directed away from warm and dry locations. In contrast, adults exhibited strong site fidelity between breeding seasons and rarely dispersed more than 100 m (range 10-1300 m). Consequently, adult dispersal kernels were much more compact and symmetric than natal dispersal kernels, suggesting adult dispersal is unlikely a driving force of declines in this population. CONCLUSION Our findings suggest that directional natal dispersal may mitigate fitness costs for trailing-edge populations by allowing individuals to track changing climate and avoid warming conditions at warm-edge range boundaries.
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Affiliation(s)
- Heather E Gaya
- Warnell School of Forestry and Natural Resources, University of Georgia, 180 E Green Street, Athens, GA, 30602, USA.
| | - Robert J Cooper
- Warnell School of Forestry and Natural Resources, University of Georgia, 180 E Green Street, Athens, GA, 30602, USA
| | - Clayton D Delancey
- Warnell School of Forestry and Natural Resources, University of Georgia, 180 E Green Street, Athens, GA, 30602, USA
| | - Jeffrey Hepinstall-Cymerman
- Warnell School of Forestry and Natural Resources, University of Georgia, 180 E Green Street, Athens, GA, 30602, USA
| | - Elizabeth A Kurimo-Beechuk
- Southeastern Cooperative Wildlife Disease Study, College of Veterinary Medicine, University of Georgia, 589 D. W. Brooks Drive, Athens, GA, 30602, USA
| | - William B Lewis
- Warnell School of Forestry and Natural Resources, University of Georgia, 180 E Green Street, Athens, GA, 30602, USA
| | - Samuel A Merker
- Department of Ecology and Evolutionary Biology, University of Connecticut, 75 N. Eagleville Road, Storrs, CT, 06269, USA
| | - Richard B Chandler
- Warnell School of Forestry and Natural Resources, University of Georgia, 180 E Green Street, Athens, GA, 30602, USA
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2
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Dodd JR, Cowx IG, Joyce DA, Bolland JD. Can't pass or won't pass: the importance of motivation when quantifying improved connectivity for riverine brown trout Salmo trutta. JOURNAL OF FISH BIOLOGY 2024; 104:851-865. [PMID: 38009724 DOI: 10.1111/jfb.15628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Revised: 11/20/2023] [Accepted: 11/21/2023] [Indexed: 11/29/2023]
Abstract
Reversing the negative impacts that anthropogenic habitat fragmentation has on animal movement is a key goal in the management of landscapes and conservation of species globally. Accurate assessment of measures to remediate habitat fragmentation, such as fish passage solutions in rivers, are imperative but are particularly challenging for territorial species, which are less likely to leave their existing home range, or populations composed of both migratory and resident individuals (i.e., partial migration). This investigation quantified the movements of translocated (captured upstream of the impediment and released downstream) and non-translocated (captured and released downstream of the impediment) riverine brown trout (Salmo trutta L.), a species known to perform a homing movement, through a fish pass using passive integrated transponder (PIT) telemetry. A significantly higher proportion of translocated fish approached, entered, and passed (on a wider range of flows) compared to non-translocated fish, consistent with the theory that motivation is a key driver in fish pass use. Translocated fish that entered the pass were significantly larger than those that approached but did not enter, presumably due to physiological capability. Translocated fish were a more reliable indicator of the fish passage solution effectiveness than non-translocated fish. Our findings hence imply that many fish passage solutions globally, and potentially measures to remediate habitat fragmentation for other taxa, may have been mistakenly assessed for unmotivated animals. Studying both non-translocated and translocated fish is recommended to provide more accurate and cost-effective fish passage solution assessments.
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Affiliation(s)
- Jamie R Dodd
- University of Hull International Fisheries Institute, University of Hull, Hull, UK
| | - Ian G Cowx
- University of Hull International Fisheries Institute, University of Hull, Hull, UK
| | | | - Jonathan D Bolland
- University of Hull International Fisheries Institute, University of Hull, Hull, UK
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3
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Lu G, Zhao L, Chai L, Cao Y, Chong Z, Liu K, Lu Y, Zhu G, Xia P, Müller O, Zhu G, Cao J. Assessing the risk of malaria local transmission and re-introduction in China from pre-elimination to elimination: A systematic review. Acta Trop 2024; 249:107082. [PMID: 38008371 DOI: 10.1016/j.actatropica.2023.107082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 11/22/2023] [Accepted: 11/23/2023] [Indexed: 11/28/2023]
Abstract
Assessing the risk of malaria local transmission and re-introduction is crucial for the preparation and implementation of an effective elimination campaign and the prevention of malaria re-introduction in China. Therefore, this review aims to evaluate the risk factors for malaria local transmission and re-introduction in China over the period of pre-elimination to elimination. Data were obtained from six databases searched for studies that assessed malaria local transmission risk before malaria elimination and re-introduction risk after the achievement of malaria elimination in China since the launch of the NMEP in 2010, employing the keywords "malaria" AND ("transmission" OR "re-introduction") and their synonyms. A total of 8,124 articles were screened and 53 articles describing 55 malaria risk assessment models in China from 2010 to 2023, including 40 models assessing malaria local transmission risk (72.7%) and 15 models assessing malaria re-introduction risk (27.3%). Factors incorporated in the 55 models were extracted and classified into six categories, including environmental and meteorological factors (39/55, 70.9%), historical epidemiology (35/55, 63.6%), vectorial factors (32/55, 58.2%), socio-demographic information (15/26, 53.8%), factors related to surveillance and response capacity (18/55, 32.7%), and population migration aspects (13/55, 23.6%). Environmental and meteorological factors as well as vectorial factors were most commonly incorporated in models assessing malaria local transmission risk (29/40, 72.5% and 21/40, 52.5%) and re-introduction risk (10/15, 66.7% and 11/15, 73.3%). Factors related to surveillance and response capacity and population migration were also important in malaria re-introduction risk models (9/15, 60%, and 6/15, 40.0%). A total of 18 models (18/55, 32.7%) reported the modeling performance. Only six models were validated internally and five models were validated externally. Of 53 incorporated studies, 45 studies had a quality assessment score of seven and above. Environmental and meteorological factors as well as vectorial factors play a significant role in malaria local transmission and re-introduction risk assessment. The factors related to surveillance and response capacity and population migration are more important in assessing malaria re-introduction risk. The internal and external validation of the existing models needs to be strengthened in future studies.
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Affiliation(s)
- Guangyu Lu
- School of Public Health, Medical College of Yangzhou University, Yangzhou University, Yangzhou, China; Jiangsu Key Laboratory of Zoonosis, Yangzhou, China.
| | - Li Zhao
- School of Public Health, Medical College of Yangzhou University, Yangzhou University, Yangzhou, China
| | - Liying Chai
- School of Public Health, Medical College of Yangzhou University, Yangzhou University, Yangzhou, China
| | - Yuanyuan Cao
- National Health Commission Key Laboratory of Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, China
| | - Zeyin Chong
- School of Public Health, Medical College of Yangzhou University, Yangzhou University, Yangzhou, China
| | - Kaixuan Liu
- School of Public Health, Medical College of Yangzhou University, Yangzhou University, Yangzhou, China
| | - Yan Lu
- Nanjing Health and Customs Quarantine Office, Nanjing, China
| | - Guoqiang Zhu
- Jiangsu Key Laboratory of Zoonosis, Yangzhou, China
| | - Pengpeng Xia
- Jiangsu Key Laboratory of Zoonosis, Yangzhou, China
| | - Olaf Müller
- Institute of Global Health, Medical School, Ruprecht-Karls-University Heidelberg, Germany
| | - Guoding Zhu
- National Health Commission Key Laboratory of Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, China; Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.
| | - Jun Cao
- National Health Commission Key Laboratory of Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, China; Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.
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4
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Frankish CK, von Benda-Beckmann AM, Teilmann J, Tougaard J, Dietz R, Sveegaard S, Binnerts B, de Jong CAF, Nabe-Nielsen J. Ship noise causes tagged harbour porpoises to change direction or dive deeper. MARINE POLLUTION BULLETIN 2023; 197:115755. [PMID: 37976591 DOI: 10.1016/j.marpolbul.2023.115755] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Revised: 10/31/2023] [Accepted: 11/02/2023] [Indexed: 11/19/2023]
Abstract
Shipping is the most pervasive source of marine noise pollution globally, yet its impact on sensitive fauna remains unclear. We tracked 10 harbour porpoises for 5-10 days to determine exposure and behavioural reactions to modelled broadband noise (10 Hz-20 kHz, VHF-weighted) from individual ships monitored by AIS. Porpoises spent a third of their time experiencing ship noise above ambient, to which they regularly reacted by moving away during daytime and diving deeper during night. However, even ships >2 km away (noise levels of 93 ± 14 dB re 1 μPa2) caused animals to react 5-9 % of the time (∼18.6 ships/day). Ships can thus influence the behaviour and habitat use of cetaceans over long distances, with worrying implications for fitness in coastal areas where anthropogenic noise from dense ship traffic repeatedly disrupt their natural behaviour.
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Affiliation(s)
- Caitlin K Frankish
- Marine Mammal Research Section, Department of Ecoscience, Aarhus University, Roskilde, Denmark.
| | - Alexander M von Benda-Beckmann
- Acoustics and Sonar Research Group, Netherlands Organization for Applied and Scientific Research (TNO), The Hague, the Netherlands
| | - Jonas Teilmann
- Marine Mammal Research Section, Department of Ecoscience, Aarhus University, Roskilde, Denmark
| | - Jakob Tougaard
- Marine Mammal Research Section, Department of Ecoscience, Aarhus University, Roskilde, Denmark
| | - Rune Dietz
- Marine Mammal Research Section, Department of Ecoscience, Aarhus University, Roskilde, Denmark
| | - Signe Sveegaard
- Marine Mammal Research Section, Department of Ecoscience, Aarhus University, Roskilde, Denmark
| | - Bas Binnerts
- Acoustics and Sonar Research Group, Netherlands Organization for Applied and Scientific Research (TNO), The Hague, the Netherlands
| | - Christ A F de Jong
- Acoustics and Sonar Research Group, Netherlands Organization for Applied and Scientific Research (TNO), The Hague, the Netherlands
| | - Jacob Nabe-Nielsen
- Marine Mammal Research Section, Department of Ecoscience, Aarhus University, Roskilde, Denmark
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5
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McAlpine‐Bellis E, Utsumi KL, Diamond KM, Klein J, Gilbert‐Smith S, Garrison GE, Eifler MA, Eifler DA. Movement patterns and habitat use for the sympatric species: Gambelia wislizenii and Aspidoscelis tigris. Ecol Evol 2023; 13:e10422. [PMID: 37575589 PMCID: PMC10413956 DOI: 10.1002/ece3.10422] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 07/14/2023] [Accepted: 07/24/2023] [Indexed: 08/15/2023] Open
Abstract
Movement is an important characteristic of an animal's ecology, reflecting the perception of and response to environmental conditions. To effectively search for food, movement patterns likely depend on habitat characteristics and the sensory systems used to find prey. We examined movements associated with foraging for two sympatric species of lizards inhabiting the Great Basin Desert of southeastern Oregon. The two species have largely overlapping diets but find prey via different sensory cues, which link to their differing foraging strategies-the long-nosed leopard lizard, Gambelia wislizenii, is a visually-oriented predator, while the western whiptail, Aspidoscelis tigris, relies more heavily on chemosensory cues to find prey. Using detailed focal observations, we characterized the habitat use and movement paths of each species. We placed markers at the location of focal animals every minute for the duration of each 30-min observation. Afterward, we recorded whether each location was in the open or in vegetation, as well as the movement metrics of step length, path length, net displacement, straightness index, and turn angle, and then made statistical comparisons between the two species. The visual forager spent more time in open areas, moved less frequently over shorter distances, and differed in patterns of plant use compared to the chemosensory forager. Path characteristics of step length and turn angle differed between species. The visual predator moved in a way that was consistent with the notion that they require a clear visual path to stalk prey whereas the movement of the chemosensory predator increased their chances of detecting prey by venturing further into vegetation. Sympatric species can partition limited resources through differences in search behavior and habitat use.
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Affiliation(s)
| | - Kaera L. Utsumi
- Erell InstituteLawrenceKansasUSA
- Biodiversity InstituteUniversity of KansasLawrenceKansasUSA
| | | | - Janine Klein
- Department of AnthropologyUniversity of CaliforniaSanta BarbaraCaliforniaUSA
| | | | | | - Maria A. Eifler
- Erell InstituteLawrenceKansasUSA
- Biodiversity InstituteUniversity of KansasLawrenceKansasUSA
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6
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Pero EM, Palm EC, Chitwood MC, Hildreth AM, Keller BJ, Sumners JA, Hansen LP, Isabelle JL, Millspaugh JJ. Spatial acclimation of elk during population restoration to the Missouri Ozarks, USA. Anim Conserv 2023. [DOI: 10.1111/acv.12866] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/04/2023]
Affiliation(s)
- E. M. Pero
- Wildlife Biology Program University of Montana Missoula MT USA
| | - E. C. Palm
- Wildlife Biology Program University of Montana Missoula MT USA
| | - M. C. Chitwood
- Natural Resource Ecology & Management Oklahoma State University Stillwater OK USA
| | | | - B. J. Keller
- Minnesota Department of Natural Resources St. Paul MN USA
| | - J. A. Sumners
- Missouri Department of Conservation Jefferson City MO USA
| | - L. P. Hansen
- Missouri Department of Conservation Columbia MO USA
- Minnesota Department of Natural Resources St. Paul MN USA
| | - J. L. Isabelle
- Missouri Department of Conservation Columbia MO USA
- Minnesota Department of Natural Resources St. Paul MN USA
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7
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Cooke SJ, Bergman JN, Twardek WM, Piczak ML, Casselberry GA, Lutek K, Dahlmo LS, Birnie-Gauvin K, Griffin LP, Brownscombe JW, Raby GD, Standen EM, Horodysky AZ, Johnsen S, Danylchuk AJ, Furey NB, Gallagher AJ, Lédée EJI, Midwood JD, Gutowsky LFG, Jacoby DMP, Matley JK, Lennox RJ. The movement ecology of fishes. JOURNAL OF FISH BIOLOGY 2022; 101:756-779. [PMID: 35788929 DOI: 10.1111/jfb.15153] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Accepted: 06/29/2022] [Indexed: 06/15/2023]
Abstract
Movement of fishes in the aquatic realm is fundamental to their ecology and survival. Movement can be driven by a variety of biological, physiological and environmental factors occurring across all spatial and temporal scales. The intrinsic capacity of movement to impact fish individually (e.g., foraging) with potential knock-on effects throughout the ecosystem (e.g., food web dynamics) has garnered considerable interest in the field of movement ecology. The advancement of technology in recent decades, in combination with ever-growing threats to freshwater and marine systems, has further spurred empirical research and theoretical considerations. Given the rapid expansion within the field of movement ecology and its significant role in informing management and conservation efforts, a contemporary and multidisciplinary review about the various components influencing movement is outstanding. Using an established conceptual framework for movement ecology as a guide (i.e., Nathan et al., 2008: 19052), we synthesized the environmental and individual factors that affect the movement of fishes. Specifically, internal (e.g., energy acquisition, endocrinology, and homeostasis) and external (biotic and abiotic) environmental elements are discussed, as well as the different processes that influence individual-level (or population) decisions, such as navigation cues, motion capacity, propagation characteristics and group behaviours. In addition to environmental drivers and individual movement factors, we also explored how associated strategies help survival by optimizing physiological and other biological states. Next, we identified how movement ecology is increasingly being incorporated into management and conservation by highlighting the inherent benefits that spatio-temporal fish behaviour imbues into policy, regulatory, and remediation planning. Finally, we considered the future of movement ecology by evaluating ongoing technological innovations and both the challenges and opportunities that these advancements create for scientists and managers. As aquatic ecosystems continue to face alarming climate (and other human-driven) issues that impact animal movements, the comprehensive and multidisciplinary assessment of movement ecology will be instrumental in developing plans to guide research and promote sustainability measures for aquatic resources.
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Affiliation(s)
- Steven J Cooke
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology and the Institute of Environmental and Interdisciplinary Science, Carleton University, Ottawa, Ontario, Canada
| | - Jordanna N Bergman
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology and the Institute of Environmental and Interdisciplinary Science, Carleton University, Ottawa, Ontario, Canada
| | - William M Twardek
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology and the Institute of Environmental and Interdisciplinary Science, Carleton University, Ottawa, Ontario, Canada
| | - Morgan L Piczak
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology and the Institute of Environmental and Interdisciplinary Science, Carleton University, Ottawa, Ontario, Canada
| | - Grace A Casselberry
- Department of Environmental Conservation, University of Massachusetts, Amherst, Massachusetts, USA
| | - Keegan Lutek
- Department of Biology, University of Ottawa, Ottawa, Ontario, Canada
| | - Lotte S Dahlmo
- Department of Biological Sciences, University of Bergen, Bergen, Norway
- Laboratory for Freshwater Ecology and Inland Fisheries, NORCE Norwegian Research Centre, Bergen, Norway
| | - Kim Birnie-Gauvin
- Section for Freshwater Fisheries and Ecology, National Institute of Aquatic Resources, Technical University of Denmark, Silkeborg, Denmark
| | - Lucas P Griffin
- Department of Environmental Conservation, University of Massachusetts, Amherst, Massachusetts, USA
| | - Jacob W Brownscombe
- Great Lakes Laboratory for Fisheries and Aquatic Sciences, Fisheries and Oceans Canada, Burlington, Ontario, Canada
| | - Graham D Raby
- Biology Department, Trent University, Peterborough, Ontario, Canada
| | - Emily M Standen
- Department of Biology, University of Ottawa, Ottawa, Ontario, Canada
| | - Andrij Z Horodysky
- Department of Marine and Environmental Science, Hampton University, Hampton, Virginia, USA
| | - Sönke Johnsen
- Biology Department, Duke University, Durham, North Caroline, USA
| | - Andy J Danylchuk
- Department of Environmental Conservation, University of Massachusetts, Amherst, Massachusetts, USA
| | - Nathan B Furey
- Department of Biological Sciences, University of New Hampshire, Durham, New Hampshire, USA
| | | | - Elodie J I Lédée
- College of Science and Engineering, James Cook University, Townsville, Queensland, Australia
| | - Jon D Midwood
- Great Lakes Laboratory for Fisheries and Aquatic Sciences, Fisheries and Oceans Canada, Burlington, Ontario, Canada
| | - Lee F G Gutowsky
- Environmental & Life Sciences Program, Trent University, Peterborough, Ontario, Canada
| | - David M P Jacoby
- Lancaster Environment Centre, Lancaster University, Lancaster, UK
| | - Jordan K Matley
- Program in Aquatic Resources, St Francis Xavier University, Antigonish, Nova Scotia, Canada
| | - Robert J Lennox
- Laboratory for Freshwater Ecology and Inland Fisheries, NORCE Norwegian Research Centre, Bergen, Norway
- Norwegian Institute for Nature Research, Trondheim, Norway
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8
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Thorstensen MJ, Vandervelde CA, Bugg WS, Michaleski S, Vo L, Mackey TE, Lawrence MJ, Jeffries KM. Non-Lethal Sampling Supports Integrative Movement Research in Freshwater Fish. Front Genet 2022; 13:795355. [PMID: 35547248 PMCID: PMC9081360 DOI: 10.3389/fgene.2022.795355] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Accepted: 03/17/2022] [Indexed: 11/13/2022] Open
Abstract
Freshwater ecosystems and fishes are enormous resources for human uses and biodiversity worldwide. However, anthropogenic climate change and factors such as dams and environmental contaminants threaten these freshwater systems. One way that researchers can address conservation issues in freshwater fishes is via integrative non-lethal movement research. We review different methods for studying movement, such as with acoustic telemetry. Methods for connecting movement and physiology are then reviewed, by using non-lethal tissue biopsies to assay environmental contaminants, isotope composition, protein metabolism, and gene expression. Methods for connecting movement and genetics are reviewed as well, such as by using population genetics or quantitative genetics and genome-wide association studies. We present further considerations for collecting molecular data, the ethical foundations of non-lethal sampling, integrative approaches to research, and management decisions. Ultimately, we argue that non-lethal sampling is effective for conducting integrative, movement-oriented research in freshwater fishes. This research has the potential for addressing critical issues in freshwater systems in the future.
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Affiliation(s)
- Matt J. Thorstensen
- Department of Biological Sciences, University of Manitoba, Winnipeg, MB, Canada
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9
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Martínez‐Miranzo B, Banda E, Gardiazábal A, Ferreiro E, Seoane J, Aguirre JI. Long‐term monitoring program reveals a mismatch between spatial distribution and reproductive success in an endangered raptor species in the Mediterranean area. Ecol Res 2022. [DOI: 10.1111/1440-1703.12311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Beatriz Martínez‐Miranzo
- Department of Biodiversity Ecology and Evolution, Faculty of Biology Complutense University of Madrid Madrid Spain
- Centro para el Estudio y Conservación de las Aves Rapaces en Argentina (CECARA) Universidad Nacional de La Pampa (UNLPam) Santa Rosa Argentina
- Instituto de Ciencias de la Tierra y Ambientales de La Pampa (INCITAP) Consejo Nacional de Investigaciones Científicas y Técnicas de Argentina (CONICET) Santa Rosa Argentina
| | - Eva Banda
- Department of Biodiversity Ecology and Evolution, Faculty of Biology Complutense University of Madrid Madrid Spain
- ENARA Educación Ambiental, XI Madrid Spain
| | | | | | - Javier Seoane
- Terrestrial Ecology Group, Department of Ecology Universidad Autónoma de Madrid Madrid Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC‐UAM) Universidad Autónoma de Madrid Madrid Spain
| | - José I. Aguirre
- Department of Biodiversity Ecology and Evolution, Faculty of Biology Complutense University of Madrid Madrid Spain
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10
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Medici EP, Mezzini S, Fleming CH, Calabrese JM, Noonan MJ. Movement ecology of vulnerable lowland tapirs between areas of varying human disturbance. MOVEMENT ECOLOGY 2022; 10:14. [PMID: 35287742 PMCID: PMC8919628 DOI: 10.1186/s40462-022-00313-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 03/02/2022] [Indexed: 06/14/2023]
Abstract
BACKGROUND Animal movement is a key ecological process that is tightly coupled to local environmental conditions. While agriculture, urbanisation, and transportation infrastructure are critical to human socio-economic improvement, these have spurred substantial changes in animal movement across the globe with potential impacts on fitness and survival. Notably, however, human disturbance can have differential effects across species, and responses to human activities are thus largely taxa and context specific. As human disturbance is only expected to worsen over the next decade it is critical to better understand how species respond to human disturbance in order to develop effective, case-specific conservation strategies. METHODS Here, we use an extensive telemetry dataset collected over 22 years to fill a critical knowledge gap in the movement ecology of lowland tapirs (Tapirus terrestris) across areas of varying human disturbance within three biomes in southern Brazil: the Pantanal, Cerrado, and Atlantic Forest. RESULTS From these data we found that the mean home range size across all monitored tapirs was 8.31 km2 (95% CI 6.53-10.42), with no evidence that home range sizes differed between sexes nor age groups. Interestingly, although the Atlantic Forest, Cerrado, and Pantanal vary substantially in habitat composition, levels of human disturbance, and tapir population densities, we found that lowland tapir movement behaviour and space use were consistent across all three biomes. Human disturbance also had no detectable effect on lowland tapir movement. Lowland tapirs living in the most altered habitats we monitored exhibited movement behaviour that was comparable to that of tapirs living in a near pristine environment. CONCLUSIONS Contrary to our expectations, although we observed individual variability in lowland tapir space use and movement, human impacts on the landscape also had no measurable effect on their movement. Lowland tapir movement behaviour thus appears to exhibit very little phenotypic plasticity in response to human disturbance. Crucially, the lack of any detectable response to anthropogenic disturbance suggests that human modified habitats risk being ecological traps for tapirs and this information should be factored into conservation actions and species management aimed towards protecting lowland tapir populations.
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Affiliation(s)
- E P Medici
- Lowland Tapir Conservation Initiative (LTCI), Instituto de Pesquisas Ecológicas (IPÊ), Rodovia Dom Pedro I, km 47, Nazaré Paulista, São Paulo, 12960-000, Brazil.
- IUCN SSC Tapir Specialist Group (TSG), Campo Grande, Brazil.
- Escola Superior de Conservação Ambiental E Sustentabilidade (ESCAS/IPÊ), Rodovia Dom Pedro I, km 47, Nazaré Paulista, São Paulo, 12960-000, Brazil.
| | - S Mezzini
- The Irving K. Barber Faculty of Science, The University of British Columbia, Okanagan Campus, Kelowna, Canada
| | - C H Fleming
- University of Maryland College Park, College Park, MD, USA
- Smithsonian Conservation Biology Institute, Front Royal, VA, USA
| | - J M Calabrese
- Center for Advanced Systems Understanding (CASUS), Görlitz, Germany
- Helmholtz-Zentrum Dresden Rossendorf (HZDR), Dresden, Germany
- Department of Ecological Modelling, Helmholtz Centre for Environmental Research (UFZ), Leipzig, Germany
| | - M J Noonan
- The Irving K. Barber Faculty of Science, The University of British Columbia, Okanagan Campus, Kelowna, Canada
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11
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Voutsa V, Battaglia D, Bracken LJ, Brovelli A, Costescu J, Díaz Muñoz M, Fath BD, Funk A, Guirro M, Hein T, Kerschner C, Kimmich C, Lima V, Messé A, Parsons AJ, Perez J, Pöppl R, Prell C, Recinos S, Shi Y, Tiwari S, Turnbull L, Wainwright J, Waxenecker H, Hütt MT. Two classes of functional connectivity in dynamical processes in networks. J R Soc Interface 2021; 18:20210486. [PMID: 34665977 PMCID: PMC8526174 DOI: 10.1098/rsif.2021.0486] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2021] [Accepted: 09/13/2021] [Indexed: 12/12/2022] Open
Abstract
The relationship between network structure and dynamics is one of the most extensively investigated problems in the theory of complex systems of recent years. Understanding this relationship is of relevance to a range of disciplines-from neuroscience to geomorphology. A major strategy of investigating this relationship is the quantitative comparison of a representation of network architecture (structural connectivity, SC) with a (network) representation of the dynamics (functional connectivity, FC). Here, we show that one can distinguish two classes of functional connectivity-one based on simultaneous activity (co-activity) of nodes, the other based on sequential activity of nodes. We delineate these two classes in different categories of dynamical processes-excitations, regular and chaotic oscillators-and provide examples for SC/FC correlations of both classes in each of these models. We expand the theoretical view of the SC/FC relationships, with conceptual instances of the SC and the two classes of FC for various application scenarios in geomorphology, ecology, systems biology, neuroscience and socio-ecological systems. Seeing the organisation of dynamical processes in a network either as governed by co-activity or by sequential activity allows us to bring some order in the myriad of observations relating structure and function of complex networks.
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Affiliation(s)
- Venetia Voutsa
- Department of Life Sciences and Chemistry, Jacobs University Bremen, 28759 Bremen, Germany
| | - Demian Battaglia
- Aix-Marseille Université, Inserm, Institut de Neurosciences des Systèmes (UMR 1106), Marseille, France
- University of Strasbourg Institute for Advanced Studies (USIAS), Strasbourg 67083, France
| | | | - Andrea Brovelli
- Aix-Marseille Université, CNRS, Institut de Neurosciences de la Timone (UMR 7289), Marseille, France
| | - Julia Costescu
- Department of Geography, Durham University, Durham DH1 3LE, UK
| | - Mario Díaz Muñoz
- Department of Sustainability, Governance and Methods, Modul University Vienna, 1190 Vienna, Austria
| | - Brian D. Fath
- Department of Biological Sciences, Towson University, Towson, Maryland 21252, USA
- Advancing Systems Analysis Program, International Institute for Applied Systems Analysis, Laxenburg 2361, Austria
- Department of Environmental Studies, Masaryk University, 60200 Brno, Czech Republic
| | - Andrea Funk
- Institute of Hydrobiology and Aquatic Ecosystem Management (IHG), University of Natural Resources and Life Sciences Vienna (BOKU), 1180 Vienna, Austria
- WasserCluster Lunz - Biologische Station GmbH, Dr. Carl Kupelwieser Promenade 5, 3293 Lunz am See, Austria
| | - Mel Guirro
- Department of Geography, Durham University, Durham DH1 3LE, UK
| | - Thomas Hein
- Institute of Hydrobiology and Aquatic Ecosystem Management (IHG), University of Natural Resources and Life Sciences Vienna (BOKU), 1180 Vienna, Austria
- WasserCluster Lunz - Biologische Station GmbH, Dr. Carl Kupelwieser Promenade 5, 3293 Lunz am See, Austria
| | - Christian Kerschner
- Department of Sustainability, Governance and Methods, Modul University Vienna, 1190 Vienna, Austria
- Department of Environmental Studies, Masaryk University, 60200 Brno, Czech Republic
| | - Christian Kimmich
- Department of Environmental Studies, Masaryk University, 60200 Brno, Czech Republic
- Regional Science and Environmental Research, Institute for Advanced Studies, 1080 Vienna, Austria
| | - Vinicius Lima
- Aix-Marseille Université, Inserm, Institut de Neurosciences des Systèmes (UMR 1106), Marseille, France
- Aix-Marseille Université, CNRS, Institut de Neurosciences de la Timone (UMR 7289), Marseille, France
| | - Arnaud Messé
- Department of Computational Neuroscience, University Medical Center Eppendorf, Hamburg University, Germany
| | | | - John Perez
- Department of Geography, Durham University, Durham DH1 3LE, UK
| | - Ronald Pöppl
- Department of Geography and Regional Research, University of Vienna, Universitätsstr. 7, 1010 Vienna, Austria
| | - Christina Prell
- Department of Cultural Geography, University of Groningen, 9747 AD, Groningen, The Netherlands
| | - Sonia Recinos
- Institute of Hydrobiology and Aquatic Ecosystem Management (IHG), University of Natural Resources and Life Sciences Vienna (BOKU), 1180 Vienna, Austria
| | - Yanhua Shi
- Department of Environmental Studies, Masaryk University, 60200 Brno, Czech Republic
| | - Shubham Tiwari
- Department of Geography, Durham University, Durham DH1 3LE, UK
| | - Laura Turnbull
- Department of Geography, Durham University, Durham DH1 3LE, UK
| | - John Wainwright
- Department of Geography, Durham University, Durham DH1 3LE, UK
| | - Harald Waxenecker
- Department of Environmental Studies, Masaryk University, 60200 Brno, Czech Republic
| | - Marc-Thorsten Hütt
- Department of Life Sciences and Chemistry, Jacobs University Bremen, 28759 Bremen, Germany
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12
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Togunov RR, Derocher AE, Lunn NJ, Auger‐Méthé M. Characterising menotactic behaviours in movement data using hidden Markov models. Methods Ecol Evol 2021. [DOI: 10.1111/2041-210x.13681] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Ron R. Togunov
- Institute for the Oceans and Fisheries The University of British Columbia Vancouver BC Canada
- Department of Zoology The University of British Columbia Vancouver BC Canada
| | - Andrew E. Derocher
- Department of Biological Sciences University of Alberta Edmonton AB Canada
| | - Nicholas J. Lunn
- Department of Biological Sciences University of Alberta Edmonton AB Canada
- Wildlife Research Division, Science and Technology Branch Environment and Climate Change Canada Edmonton AB Canada
| | - Marie Auger‐Méthé
- Institute for the Oceans and Fisheries The University of British Columbia Vancouver BC Canada
- Department of Statistics University of British Columbia Vancouver BC Canada
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13
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Chamberlain MJ, Cohen BS, Wightman PH, Rushton E, Hinton JW. Fine-scale movements and behaviors of coyotes ( Canis latrans) during their reproductive period. Ecol Evol 2021; 11:9575-9588. [PMID: 34306644 PMCID: PMC8293769 DOI: 10.1002/ece3.7777] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 05/24/2021] [Accepted: 05/25/2021] [Indexed: 12/03/2022] Open
Abstract
In canids, resident breeders hold territories but require different resources than transient individuals (i.e., dispersers), which may result in differential use of space, land cover, and food by residents and transients. In the southeastern United States, coyote (Canis latrans) reproduction occurs during spring and is energetically demanding for residents, but transients do not reproduce and therefore can exhibit feeding behaviors with lower energetic rewards. Hence, how coyotes behave in their environment likely differs between resident and transient coyotes. We captured and monitored 36 coyotes in Georgia during 2018-2019 and used data from 11 resident breeders, 12 predispersing residents (i.e., offspring of resident breeders), and 11 transients to determine space use, movements, and relationships between these behaviors and landcover characteristics. Average home range size for resident breeders and predispersing offspring was 20.7 ± 2.5 km² and 50.7 ± 10.0 km², respectively. Average size of transient ranges was 241.4 ± 114.5 km². Daily distance moved was 6.3 ± 3.0 km for resident males, 5.5 ± 2.7 km for resident females, and 6.9 ± 4.2 km for transients. We estimated first-passage time values to assess the scale at which coyotes respond to their environment, and used behavioral change-point analysis to determine that coyotes exhibited three behavioral states. We found notable differences between resident and transient coyotes in regard to how landcover characteristics influenced their behavioral states. Resident coyotes tended to select for areas with denser vegetation while resting and foraging, but for areas with less dense vegetation and canopy cover when walking. Transient coyotes selected areas closer to roads and with lower canopy cover while resting, but for areas farther from roads when foraging and walking. Our findings suggest that behaviors of both resident and transient coyotes are influenced by varying landcover characteristics, which could have implications for prey.
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Affiliation(s)
| | - Bradley S. Cohen
- College of Arts and SciencesTennessee Technological UniversityCookevilleTNUSA
| | - Patrick H. Wightman
- Warnell School of Forestry and Natural ResourcesUniversity of GeorgiaAthensGAUSA
| | - Emily Rushton
- Georgia Department of Natural Resources – Wildlife Resources DivisionSocial CircleGAUSA
| | - Joseph W. Hinton
- College of Forest Resources and Environmental ScienceMichigan Technological UniversityHoughtonMIUSA
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14
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The Relationship Between GPS Sampling Interval and Estimated Daily Travel Distances in Chacma Baboons (Papio ursinus). INT J PRIMATOL 2021. [DOI: 10.1007/s10764-021-00220-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
AbstractModern studies of animal movement use the Global Positioning System (GPS) to estimate animals’ distance traveled. The temporal resolution of GPS fixes recorded should match those of the behavior of interest; otherwise estimates are likely to be inappropriate. Here, we investigate how different GPS sampling intervals affect estimated daily travel distances for wild chacma baboons (Papio ursinus). By subsampling GPS data collected at one fix per second for 143 daily travel distances (12 baboons over 11–12 days), we found that less frequent GPS fixes result in smaller estimated travel distances. Moving from a GPS frequency of one fix every second to one fix every 30 s resulted in a 33% reduction in estimated daily travel distance, while using hourly GPS fixes resulted in a 66% reduction. We then use the relationship we find between estimated travel distance and GPS sampling interval to recalculate published baboon daily travel distances and find that accounting for the predicted effect of sampling interval does not affect conclusions of previous comparative analyses. However, if short-interval or continuous GPS data—which are becoming more common in studies of primate movement ecology—are compared with historical (longer interval) GPS data in future work, controlling for sampling interval is necessary.
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15
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Bailey JD, King AJ, Codling EA, Short AM, Johns GI, Fürtbauer I. "Micropersonality" traits and their implications for behavioral and movement ecology research. Ecol Evol 2021; 11:3264-3273. [PMID: 33841782 PMCID: PMC8019044 DOI: 10.1002/ece3.7275] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Revised: 12/23/2020] [Accepted: 01/18/2021] [Indexed: 11/06/2022] Open
Abstract
Many animal personality traits have implicit movement-based definitions and can directly or indirectly influence ecological and evolutionary processes. It has therefore been proposed that animal movement studies could benefit from acknowledging and studying consistent interindividual differences (personality), and, conversely, animal personality studies could adopt a more quantitative representation of movement patterns.Using high-resolution tracking data of three-spined stickleback fish (Gasterosteus aculeatus), we examined the repeatability of four movement parameters commonly used in the analysis of discrete time series movement data (time stationary, step length, turning angle, burst frequency) and four behavioral parameters commonly used in animal personality studies (distance travelled, space use, time in free water, and time near objects).Fish showed repeatable interindividual differences in both movement and behavioral parameters when observed in a simple environment with two, three, or five shelters present. Moreover, individuals that spent less time stationary, took more direct paths, and less commonly burst travelled (movement parameters), were found to travel farther, explored more of the tank, and spent more time in open water (behavioral parameters).Our case study indicates that the two approaches-quantifying movement and behavioral parameters-are broadly equivalent, and we suggest that movement parameters can be viewed as "micropersonality" traits that give rise to broad-scale consistent interindividual differences in behavior. This finding has implications for both personality and movement ecology research areas. For example, the study of movement parameters may provide a robust way to analyze individual personalities in species that are difficult or impossible to study using standardized behavioral assays.
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Affiliation(s)
- Joseph D. Bailey
- Department of Mathematical SciencesUniversity of EssexColchesterUK
| | - Andrew J. King
- Department of BiosciencesCollege of ScienceSwansea UniversitySwanseaUK
| | | | - Ashley M. Short
- Department of BiosciencesCollege of ScienceSwansea UniversitySwanseaUK
| | - Gemma I. Johns
- Department of BiosciencesCollege of ScienceSwansea UniversitySwanseaUK
| | - Ines Fürtbauer
- Department of BiosciencesCollege of ScienceSwansea UniversitySwanseaUK
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16
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Carnahan AM, van Manen FT, Haroldson MA, Stenhouse GB, Robbins CT. Quantifying energetic costs and defining energy landscapes experienced by grizzly bears. J Exp Biol 2021; 224:224/6/jeb241083. [DOI: 10.1242/jeb.241083] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2020] [Accepted: 02/17/2021] [Indexed: 11/20/2022]
Abstract
ABSTRACT
Animal movements are major determinants of energy expenditure and ultimately the cost–benefit of landscape use. Thus, we sought to understand those costs and how grizzly bears (Ursus arctos) move in mountainous landscapes. We trained captive grizzly bears to walk on a horizontal treadmill and up and down 10% and 20% slopes. The cost of moving upslope increased linearly with speed and slope angle, and this was more costly than moving horizontally. The cost of downslope travel at slower speeds was greater than the cost of traveling horizontally but appeared to decrease at higher speeds. The most efficient walking speed that minimized cost per unit distance was 1.19±0.11 m s−1. However, grizzly bears fitted with GPS collars in the Greater Yellowstone Ecosystem moved at an average velocity of 0.61±0.28 m s−1 and preferred to travel on near-horizontal slopes at twice their occurrence. When traveling uphill or downhill, grizzly bears chose paths across all slopes that were ∼54% less steep and costly than the maximum available slope. The net costs (J kg−1 m−1) of moving horizontally and uphill were the same for grizzly bears, humans and digitigrade carnivores, but those costs were 46% higher than movement costs for ungulates. These movement costs and characteristics of landscape use determined using captive and wild grizzly bears were used to understand the strategies that grizzly bears use for preying on large ungulates and the similarities in travel between people and grizzly bears that might affect the risk of encountering each other on shared landscapes.
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Affiliation(s)
- Anthony M. Carnahan
- School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA
| | - Frank T. van Manen
- US Geological Survey, Northern Rocky Mountain Science Center, Interagency Grizzly Bear Study Team, Bozeman, MT 59715, USA
| | - Mark A. Haroldson
- US Geological Survey, Northern Rocky Mountain Science Center, Interagency Grizzly Bear Study Team, Bozeman, MT 59715, USA
| | | | - Charles T. Robbins
- School of the Environment and School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA
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17
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Behavioral state resource selection in invasive wild pigs in the Southeastern United States. Sci Rep 2021; 11:6924. [PMID: 33767284 PMCID: PMC7994638 DOI: 10.1038/s41598-021-86363-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Accepted: 03/12/2021] [Indexed: 11/25/2022] Open
Abstract
Elucidating correlations between wild pig (Sus scrofa) behavior and landscape attributes can aid in the advancement of management strategies for controlling populations. Using GPS data from 49 wild pigs in the southeastern U.S., we used hidden Markov models to define movement path characteristics and assign behaviors (e.g., resting, foraging, travelling). We then explored the connection between these behaviors and resource selection for both sexes between two distinct seasons based on forage availability (i.e., low forage, high forage). Females demonstrated a crepuscular activity pattern in the high-forage season and a variable pattern in the low-forage season, while males exhibited nocturnal activity patterns across both seasons. Wild pigs selected for bottomland hardwoods and dense canopy cover in all behavioral states in both seasons. Males selected for diversity in vegetation types while foraging in the low-forage season compared to the high-forage season and demonstrated an increased use of linear anthropogenic features across seasons while traveling. Wild pigs can establish populations and home ranges in an array of landscapes, but our results demonstrate male and female pigs exhibit clear differences in movement behavior and there are key resources associated with common behaviors that can be targeted to improve the efficiency of management programs.
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18
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Malishev M, Kramer-Schadt S. Movement, models, and metabolism: Individual-based energy budget models as next-generation extensions for predicting animal movement outcomes across scales. Ecol Modell 2021. [DOI: 10.1016/j.ecolmodel.2020.109413] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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19
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Teitelbaum CS, Hepinstall-Cymerman J, Kidd-Weaver A, Hernandez SM, Altizer S, Hall RJ. Urban specialization reduces habitat connectivity by a highly mobile wading bird. MOVEMENT ECOLOGY 2020; 8:49. [PMID: 33372623 PMCID: PMC7720518 DOI: 10.1186/s40462-020-00233-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Accepted: 11/17/2020] [Indexed: 06/12/2023]
Abstract
BACKGROUND Mobile animals transport nutrients and propagules across habitats, and are crucial for the functioning of food webs and for ecosystem services. Human activities such as urbanization can alter animal movement behavior, including site fidelity and resource use. Because many urban areas are adjacent to natural sites, mobile animals might connect natural and urban habitats. More generally, understanding animal movement patterns in urban areas can help predict how urban expansion will affect the roles of highly mobile animals in ecological processes. METHODS Here, we examined movements by a seasonally nomadic wading bird, the American white ibis (Eudocimus albus), in South Florida, USA. White ibis are colonial wading birds that forage on aquatic prey; in recent years, some ibis have shifted their behavior to forage in urban parks, where they are fed by people. We used a spatial network approach to investigate how individual movement patterns influence connectivity between urban and non-urban sites. We built a network of habitat connectivity using GPS tracking data from ibis during their non-breeding season and compared this network to simulated networks that assumed individuals moved indiscriminately with respect to habitat type. RESULTS We found that the observed network was less connected than the simulated networks, that urban-urban and natural-natural connections were strong, and that individuals using urban sites had the least-variable habitat use. Importantly, the few ibis that used both urban and natural habitats contributed the most to connectivity. CONCLUSIONS Habitat specialization in urban-acclimated wildlife could reduce the exchange of propagules and nutrients between urban and natural areas, which has consequences both for beneficial effects of connectivity such as gene flow and for detrimental effects such as the spread of contaminants or pathogens.
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Affiliation(s)
| | | | - Anjelika Kidd-Weaver
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, USA
- Present address: College of Agriculture, Forestry and Life Sciences, Clemson University, Clemson, SC, USA
| | - Sonia M Hernandez
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, USA
- Southeastern Cooperative Wildlife Disease Study, College of Veterinary Medicine, University of Georgia, Athens, GA, USA
| | - Sonia Altizer
- Odum School of Ecology, University of Georgia, Athens, GA, USA
| | - Richard J Hall
- Odum School of Ecology, University of Georgia, Athens, GA, USA
- Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, USA
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21
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Picardi S, Smith BJ, Boone ME, Frederick PC, Cecere JG, Rubolini D, Serra L, Pirrello S, Borkhataria RR, Basille M. Analysis of movement recursions to detect reproductive events and estimate their fate in central place foragers. MOVEMENT ECOLOGY 2020; 8:24. [PMID: 32518652 PMCID: PMC7268620 DOI: 10.1186/s40462-020-00201-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2019] [Accepted: 03/17/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Recursive movement patterns have been used to detect behavioral structure within individual movement trajectories in the context of foraging ecology, home-ranging behavior, and predator avoidance. Some animals exhibit movement recursions to locations that are tied to reproductive functions, including nests and dens; while existing literature recognizes that, no method is currently available to explicitly target different types of revisited locations. Moreover, the temporal persistence of recursive movements to a breeding location can carry information regarding the fate of breeding attempts, but it has never been used as a metric to quantify recursive movement patterns. Here, we introduce a method to locate breeding attempts and estimate their fate from GPS-tracking data of central place foragers. We tested the performance of our method in three bird species differing in breeding ecology (wood stork (Mycteria americana), lesser kestrel (Falco naumanni), Mediterranean gull (Ichthyaetus melanocephalus)) and implemented it in the R package 'nestR'. METHODS We identified breeding sites based on the analysis of recursive movements within individual tracks. Using trajectories with known breeding attempts, we estimated a set of species-specific criteria for the identification of nest sites, which we further validated using non-reproductive individuals as controls. We then estimated individual nest survival as a binary measure of reproductive fate (success, corresponding to fledging of at least one chick, or failure) from nest-site revisitation histories during breeding attempts, using a Bayesian hierarchical modeling approach that accounted for temporally variable revisitation patterns, probability of visit detection, and missing data. RESULTS Across the three species, positive predictive value of the nest-site detection algorithm varied between 87 and 100% and sensitivity between 88 and 92%, and we correctly estimated the fate of 86-100% breeding attempts. CONCLUSIONS By providing a method to formally distinguish among revisited locations that serve different ecological functions and introducing a probabilistic framework to quantify temporal persistence of movement recursions, we demonstrated how the analysis of recursive movement patterns can be applied to estimate reproduction in central place foragers. Beyond avian species, the principles of our method can be applied to other central place foraging breeders such as denning mammals. Our method estimates a component of individual fitness from movement data and will help bridge the gap between movement behavior, environmental factors, and their fitness consequences.
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Affiliation(s)
- Simona Picardi
- Department of Wildlife Ecology and Conservation, Fort Lauderdale Research and Education Center, University of Florida, 3205 College Ave, Davie, FL 33314 USA
| | - Brian J. Smith
- Deparmtent of Wildland Resources, Ecology Center, Utah State University, Logan, UT 84322 USA
| | - Matthew E. Boone
- Department of Wildlife Ecology and Conservation, Fort Lauderdale Research and Education Center, University of Florida, 3205 College Ave, Davie, FL 33314 USA
| | - Peter C. Frederick
- Department of Wildlife Ecology and Conservation, University of Florida, 368 Newins-Ziegler Hall, Gainesville, FL 32611 USA
| | - Jacopo G. Cecere
- Area Avifauna Migratrice, Istituto Superiore per la Protezione e la Ricerca Ambientale (ISPRA), via Cà Fornacetta 9, I-40064 Ozzano Emilia, BO Italy
| | - Diego Rubolini
- Dipartimento di Scienze e Politiche Ambientali, Università degli Studi di Milano, via Celoria 26, I’20133 Milan, Italy
| | - Lorenzo Serra
- Area Avifauna Migratrice, Istituto Superiore per la Protezione e la Ricerca Ambientale (ISPRA), via Cà Fornacetta 9, I-40064 Ozzano Emilia, BO Italy
| | - Simone Pirrello
- Area Avifauna Migratrice, Istituto Superiore per la Protezione e la Ricerca Ambientale (ISPRA), via Cà Fornacetta 9, I-40064 Ozzano Emilia, BO Italy
| | - Rena R. Borkhataria
- Department of Wildlife Ecology and Conservation, Everglades Research and Education Center, University of Florida, 3200 E Palm Beach Rd, Belle Glade, FL 33430 USA
| | - Mathieu Basille
- Department of Wildlife Ecology and Conservation, Fort Lauderdale Research and Education Center, University of Florida, 3205 College Ave, Davie, FL 33314 USA
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22
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Utsumi K, Kusaka C, Pedersen R, Staley C, Dunlap L, Smith SG, Eifler MA, Eifler DA. Habitat-Dependent Search Behavior in the Colorado Checkered Whiptail (Aspidoscelis neotesselata). WEST N AM NATURALIST 2020. [DOI: 10.3398/064.080.0102] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Affiliation(s)
| | - Carina Kusaka
- Department of Fish, Wildlife and Conservation Biology, Colorado State University, Fort Collins, CO 80523
| | - Rachael Pedersen
- Department of Fish, Wildlife and Conservation Biology, Colorado State University, Fort Collins, CO 80523
| | - Catherine Staley
- Department of Fish, Wildlife and Conservation Biology, Colorado State University, Fort Collins, CO 80523
| | - Lisa Dunlap
- Undergraduate Mathematics Program, University of California, Berkeley, CA 94702
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23
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Vogel SM, Lambert B, Songhurst AC, McCulloch GP, Stronza AL, Coulson T. Exploring movement decisions: Can Bayesian movement-state models explain crop consumption behaviour in elephants (Loxodonta africana)? J Anim Ecol 2020; 89:1055-1068. [PMID: 31960413 DOI: 10.1111/1365-2656.13177] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2019] [Accepted: 11/19/2019] [Indexed: 11/29/2022]
Abstract
Animal movements towards goals or targets are based upon either maximization of resource acquisition or risk avoidance, and the way animals move can reveal information about their motivation. We use hidden Markov models (HMMs) fitted in a Bayesian framework and hourly Global Positioning System fixes to distinguish animal movements into distinct states and analyse the influence of environmental variables on being in, and switching to, a particular state. Specifically, we apply our models to understand elephant movement decisions around agricultural fields, and crop consumption. As it is unclear what the role of habitat features are on this complex process, we analyse whether elephants target agricultural crops for consumption, or simply pass through them in search of water. Our HMMs separate elephant movements into two states: exploratory movements that are fast and directional, and encamped movements that are slow and meandering. For each elephant, we ran 16 models with each possible combination of selected habitat features (river, elephant corridor, agricultural field, trees), and repeated these analyses including interaction effects with both season and time of day. We used cross-validation to select the best model. In corridors, exploratory movements are dominant. Elephants mainly showed encamped movements at the river during the dry season, when temporary water sources have dried out and elephants relied on this permanent water source. In fields, males most often exhibited exploratory movements to and from the river, while females showed an increase in the frequency of encamped behaviour during the dry season and at night-the times when most crop consumption and movements through fields occur. Adaptation to risk could explain this behaviour, since foraging in fields is likely less risky under the cover of darkness and during the dry season when farmers are absent. This sex segregation in elephant movement decisions highlights the importance of predation risk in shaping movement patterns, which can result in sex segregation in responses to mitigation methods. The increase in encamped movements in the dry season suggests the importance of agricultural timing, and shows the potential for early ploughing and early-harvest crop types in order to reduce elephant crop consumption. Taking this into account could increase efficiency of elephant crop consumption mitigation.
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Affiliation(s)
- Susanne Marieke Vogel
- Department of Zoology Research and Administration Building, University of Oxford, Oxford, UK.,Ecoexist Trust, Maun, Botswana.,Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Bioscience, Aarhus University, Aarhus C, Denmark.,Section for Ecoinformatics and Biodiversity, Department of Bioscience, Aarhus University, Aarhus C, Denmark
| | - Ben Lambert
- Department of Zoology Research and Administration Building, University of Oxford, Oxford, UK.,Department of Infectious Disease Epidemiology, Imperial College London, London, UK
| | - Anna Catherine Songhurst
- Department of Zoology Research and Administration Building, University of Oxford, Oxford, UK.,Ecoexist Trust, Maun, Botswana.,Agriculture and Life Sciences, Texas A&M, College Station, TX, USA
| | - Graham Paul McCulloch
- Department of Zoology Research and Administration Building, University of Oxford, Oxford, UK.,Ecoexist Trust, Maun, Botswana.,Agriculture and Life Sciences, Texas A&M, College Station, TX, USA
| | - Amanda Lee Stronza
- Ecoexist Trust, Maun, Botswana.,Agriculture and Life Sciences, Texas A&M, College Station, TX, USA
| | - Tim Coulson
- Department of Zoology Research and Administration Building, University of Oxford, Oxford, UK
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Scaling the risk landscape drives optimal life-history strategies and the evolution of grazing. Proc Natl Acad Sci U S A 2020; 117:1580-1586. [PMID: 31848238 PMCID: PMC6983398 DOI: 10.1073/pnas.1907998117] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
Consumers face numerous risks that can be minimized by incorporating different life-history strategies. How much and when a consumer adds to its energetic reserves or invests in reproduction are key behavioral and physiological adaptations that structure communities. Here we develop a theoretical framework that explicitly accounts for stochastic fluctuations of an individual consumer's energetic reserves while foraging and reproducing on a landscape with resources that range from uniformly distributed to highly clustered. First, we show that the selection of alternative life histories depends on both the mean and variance of resource availability, where depleted and more stochastic environments promote investment in each reproductive event at the expense of future fitness as well as more investment per offspring. We then show that if resource variance scales with body size due to landscape clustering, consumers that forage for clustered foods are susceptible to strong Allee effects, increasing extinction risk. Finally, we show that the proposed relationship between resource distributions, consumer body size, and emergent demographic risk offers key ecological insights into the evolution of large-bodied grazing herbivores from small-bodied browsing ancestors.
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25
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Wells CR, Lethbridge M. Intensive and extensive movements of feral camels in central Australia. RANGELAND JOURNAL 2020. [DOI: 10.1071/rj19054] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
A better understanding of the movement of feral dromedary camels (Camelus dromedarius) in Australia would be useful for planning removal operations (harvest or culling), because the pattern and scale of camel movement relates to the period they reside in a given area, and thus the search effort, timing and frequency of removal operations. From our results, we suspect that the dune direction influences how camels move across central Australia; particularly effects like the north–south longitudinal dune systems in the Simpson Desert, which appeared to elongate camel movement in the same direction as the dunes. We called this movement anisotropy. Research suggests camel movement in Australia is not migratory but partially cyclic, with two distinctive movement patterns. Our study investigated this further by using satellite tracking data from 54 camels in central Australia, recorded between 2007 and 2016. The mean tracking period for each animal was 363.9 days (s.e.m.=44.1 days). We used a method labelled multi-scale partitioning to test for changes in movement behaviour and partitioned more localised intensive movements within utilisation areas, from larger-scale movement, called ranging. This involved analysing the proximity of movement trajectories to other nearby trajectories of the same animal over time. We also used Dynamic Brownian Bridges Movement Models, which consider the relationship of consecutive locations to determine the areas of utilisation. The mean utilisation area and duration of a camel (n=658 areas) was found to be 342.6km2 (s.e.m.=33.2km2) over 23.5 days (s.e.m.=1.6 days), and the mean ranging distance (n=611 ranging paths) was a 45.1km (s.e.m.=2.0km) path over 3.1 days (s.e.m.=0.1 days).
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26
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Barth BJ, FitzGibbon SI, Gillett A, Wilson RS, Moffitt B, Pye GW, Adam D, Preece H, Ellis WA. Scattered paddock trees and roadside vegetation can provide important habitat for koalas (Phascolarctos cinereus) in an agricultural landscape. AUSTRALIAN MAMMALOGY 2020. [DOI: 10.1071/am18031] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Habitat loss and fragmentation threaten the survival of koalas in Queensland. In rural landscapes, remaining koala habitat is often in the form of scattered paddock trees, patches of vegetation and roadside vegetation. The aims of this study were to (1) quantify the use of these three habitat types; (2) determine whether there is an increased use of scattered trees during the breeding season; and (3) describe the movement characteristics (daily step-length and turning angle) of koalas in different habitat types. To do this, koalas were caught and fitted with global positioning system (GPS) loggers that recorded their daily locations. We found koalas utilised all three habitat types in both breeding and non-breeding seasons, but roadside vegetation and scattered trees were utilised significantly more than expected based on their availability within the landscape. We found no significant difference in step-length or turning angles in scattered trees compared with patches of vegetation. We conclude that scattered trees are a critical element of habitat in this rural landscape. This work provides evidence that retaining or planting scattered trees within the rural landscape would likely complement or possibly enhance the conservation value of rural landscapes for koalas.
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27
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Haase CG, Fletcher RJ, Slone DH, Reid JP, Butler SM. Traveling to thermal refuges during stressful temperatures leads to foraging constraints in a central-place forager. J Mammal 2019. [DOI: 10.1093/jmammal/gyz197] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Central-place foragers can be constrained by the distance between habitats. When an organism relies on a central place for thermal refuge, the distance to food resources can potentially constrain foraging behavior. We investigated the effect of distance between thermal refuges and forage patches of the cold-intolerant marine mammal, the Florida manatee (Trichechus manatus latirostris), on foraging duration. We tested the alternative hypotheses of time minimization and energy maximization as a response to distance between habitats. We also determined if manatees mitigate foraging constraints with increased visits to closer thermal refuges. We used hidden Markov models to assign discrete behaviors from movement parameters as a function of water temperature and assessed the influence of distance on foraging duration in water temperatures above (> 20°C) and below (≤ 20°C) the lower critical limit of the thermoneutral zone of manatees. We found that with increased distance, manatees decreased foraging duration in cold water temperature and increased foraging duration in warmer temperatures. We also found that manatees returned to closer thermal refuges more often. Our results suggest that the spatial relationship of thermal and forage habitats can impact behavioral decisions regarding foraging. Addressing foraging behavior questions while considering thermoregulatory behavior implicates the importance of understanding changing environments on animal behavior, particularly in the face of current global change.
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Affiliation(s)
- Catherine G Haase
- School of Natural Resources and Environment, University of Florida, Gainesville, FL, USA
- Austin Peay State University, Department of Biology, Clarksville, TN, USA
- U.S. Geological Survey Wetland and Aquatic Research Center, Gainesville, FL, USA
| | - Robert J Fletcher
- Department of Wildlife Ecology and Conservation, University of Florida, Gainesville, FL, USA
| | - Daniel H Slone
- U.S. Geological Survey Wetland and Aquatic Research Center, Gainesville, FL, USA
| | - James P Reid
- U.S. Geological Survey Wetland and Aquatic Research Center, Gainesville, FL, USA
| | - Susan M Butler
- U.S. Geological Survey Wetland and Aquatic Research Center, Gainesville, FL, USA
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Dickie M, McNay SR, Sutherland GD, Cody M, Avgar T. Corridors or risk? Movement along, and use of, linear features varies predictably among large mammal predator and prey species. J Anim Ecol 2019; 89:623-634. [PMID: 31648375 PMCID: PMC7028095 DOI: 10.1111/1365-2656.13130] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 09/23/2019] [Indexed: 11/28/2022]
Abstract
Space-use behaviour reflects trade-offs in meeting ecological needs and can have consequences for individual survival and population demographics. The mechanisms underlying space use can be understood by simultaneously evaluating habitat selection and movement patterns, and fine-resolution locational data are increasing our ability to do so. We use high-resolution location data and an integrated step-selection analysis to evaluate caribou, moose, bear, and wolf habitat selection and movement behaviour in response to anthropogenic habitat modification, though caribou data were limited. Space-use response to anthropogenic linear features (LFs) by predators and prey is hypothesized to increase predator hunting efficiency and is thus believed to be a leading factor in woodland caribou declines in western Canada. We found that all species moved faster while on LFs. Wolves and bears were also attracted towards LFs, whereas prey species avoided them. Predators and prey responded less strongly and consistently to natural features such as streams, rivers and lakeshores. These findings are consistent with the hypothesis that LFs facilitate predator movement and increase hunting efficiency, while prey perceive such features as risky. Understanding the behavioural mechanisms underlying space-use patterns is important in understanding how future land-use may impact predator-prey interactions. Explicitly linking behaviour to fitness and demography will be important to fully understand the implications of management strategies.
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Affiliation(s)
- Melanie Dickie
- Alberta Biodiversity Monitoring Institute, University of Alberta, Edmonton, AB, Canada
| | | | | | | | - Tal Avgar
- The Department of Wildland Resources, Utah State University, Logan, UT, USA
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Duparc A, Garel M, Marchand P, Dubray D, Maillard D, Loison A. Through the taste buds of a large herbivore: foodscape modeling contributes to an understanding of forage selection processes. OIKOS 2019. [DOI: 10.1111/oik.06386] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Antoine Duparc
- Unité Ongulés Sauvages, Office National de la Chasse et de la Faune Sauvage, Direction de la Recherche et de l'Expertise Gières France
- Laboratoire d'Ecologie Alpine, Centre National de la Recherche Scientifique, Univ. de Savoie, Le Bourget‐du‐Lac France
| | - Mathieu Garel
- Unité Ongulés Sauvages, Office National de la Chasse et de la Faune Sauvage, Direction de la Recherche et de l'Expertise Gières France
| | - Pascal Marchand
- Unité Ongulés Sauvages, Office National de la Chasse et de la Faune Sauvage, Direction de la Recherche et de l'Expertise Gières France
| | - Dominique Dubray
- Unité Ongulés Sauvages, Office National de la Chasse et de la Faune Sauvage, Direction de la Recherche et de l'Expertise Gières France
| | - Daniel Maillard
- Unité Ongulés Sauvages, Office National de la Chasse et de la Faune Sauvage, Direction de la Recherche et de l'Expertise Gières France
| | - Anne Loison
- Laboratoire d'Ecologie Alpine, Centre National de la Recherche Scientifique, Univ. de Savoie, Le Bourget‐du‐Lac France
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30
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Fleming CH, Noonan MJ, Medici EP, Calabrese JM. Overcoming the challenge of small effective sample sizes in home‐range estimation. Methods Ecol Evol 2019. [DOI: 10.1111/2041-210x.13270] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Christen H. Fleming
- Smithsonian Conservation Biology Institute Front Royal VA USA
- Department of Biology University of Maryland College Park MD USA
| | - Michael J. Noonan
- Smithsonian Conservation Biology Institute Front Royal VA USA
- Department of Biology University of Maryland College Park MD USA
| | - Emilia Patricia Medici
- Lowland Tapir Conservation Initiative, Instituto de Pesquisas Ecologicas Campo Grande Mato Grosso do Sul Brazil
| | - Justin M. Calabrese
- Smithsonian Conservation Biology Institute Front Royal VA USA
- Department of Biology University of Maryland College Park MD USA
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31
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Vanthomme HPA, Nzamba BS, Alonso A, Todd AF. Empirical selection between least-cost and current-flow designs for establishing wildlife corridors in Gabon. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2019; 33:329-338. [PMID: 30022531 DOI: 10.1111/cobi.13194] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Revised: 06/05/2018] [Accepted: 07/13/2018] [Indexed: 06/08/2023]
Abstract
Corridors are intended to increase species survival by abating landscape fragmentation resulting from the conversion of natural habitats into human-dominated matrices. Conservation scientists often rely on 1 type of corridor model, typically the least-cost model or current-flow model, to construct a linkage design, and their choice is not usually based on theory or empirical evidence. We developed a method to empirically confirm whether corridors produced by these 2 models are used by target species under current landscape conditions. We applied this method in the Gamba landscape between 2 national parks in southwestern Gabon. We collected signs of presence of African forest elephant (Loxodonta cyclotis), forest buffalo (Syncerus caffer nanus), and 2 apes, western lowland gorilla (Gorilla gorilla gorilla) and central chimpanzee (Pan troglodytes troglodytes), on transects. We used patch-occupancy models to identify least-cost and current-flow corridors for these 4 species. On average, 28.7% of current-flow corridors overlapped with least-cost corridors, confirming that the choice of corridor model can affect the location of the resulting linkage design. We validated these corridors by monitoring signs and examining camera detections on new transects within and outside modeled corridors. Current-flow corridors performed better than least-cost corridors for elephants, whereas the opposite was found for buffalo and apes. Locations of the highest priority corridors for the 3 taxa did not overlap, and only 18.3% of their combined surface was common among 2 species. We used centrality metrics to calculate the average contribution of corridor pixels to landscape connectivity and derived an index that can be used to prioritize corridors. As a result, we recommend protecting at least 17.4% of the land surface area around Gamba town to preserve the preferred travel routes of the target species.
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Affiliation(s)
- Hadrien P A Vanthomme
- Center for Conservation and Sustainability, Smithsonian Conservation Biology Institute, P.O. Box 37012, MRC 705, Washington, D.C. 20013-7012, U.S.A
| | - Brave S Nzamba
- World Wildlife Fund, Gabon Country Program Office, Montée de Louis, BP 9144, Libreville, Gabon
| | - Alfonso Alonso
- Center for Conservation and Sustainability, Smithsonian Conservation Biology Institute, P.O. Box 37012, MRC 705, Washington, D.C. 20013-7012, U.S.A
| | - Angelique F Todd
- Center for Conservation and Sustainability, Smithsonian Conservation Biology Institute, P.O. Box 37012, MRC 705, Washington, D.C. 20013-7012, U.S.A
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32
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Calabrese JM, Fleming CH, Fagan WF, Rimmler M, Kaczensky P, Bewick S, Leimgruber P, Mueller T. Disentangling social interactions and environmental drivers in multi-individual wildlife tracking data. Philos Trans R Soc Lond B Biol Sci 2019; 373:rstb.2017.0007. [PMID: 29581392 DOI: 10.1098/rstb.2017.0007] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Accepted: 10/31/2017] [Indexed: 11/12/2022] Open
Abstract
While many animal species exhibit strong conspecific interactions, movement analyses of wildlife tracking datasets still largely focus on single individuals. Multi-individual wildlife tracking studies provide new opportunities to explore how individuals move relative to one another, but such datasets are frequently too sparse for the detailed, acceleration-based analytical methods typically employed in collective motion studies. Here, we address the methodological gap between wildlife tracking data and collective motion by developing a general method for quantifying movement correlation from sparsely sampled data. Unlike most existing techniques for studying the non-independence of individual movements with wildlife tracking data, our approach is derived from an analytically tractable stochastic model of correlated movement. Our approach partitions correlation into a deterministic tendency to move in the same direction termed 'drift correlation' and a stochastic component called 'diffusive correlation'. These components suggest the mechanisms that coordinate movements, with drift correlation indicating external influences, and diffusive correlation pointing to social interactions. We use two case studies to highlight the ability of our approach both to quantify correlated movements in tracking data and to suggest the mechanisms that generate the correlation. First, we use an abrupt change in movement correlation to pinpoint the onset of spring migration in barren-ground caribou. Second, we show how spatial proximity mediates intermittently correlated movements among khulans in the Gobi desert. We conclude by discussing the linkages of our approach to the theory of collective motion.This article is part of the theme issue 'Collective movement ecology'.
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Affiliation(s)
- Justin M Calabrese
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, Front Royal, VA, USA
| | - Christen H Fleming
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, Front Royal, VA, USA.,Department of Biology, University of Maryland, College Park, MD, USA
| | - William F Fagan
- Department of Biology, University of Maryland, College Park, MD, USA
| | - Martin Rimmler
- Department of Biology, University of Stuttgart, Stuttgart, Germany
| | | | - Sharon Bewick
- Department of Biology, University of Maryland, College Park, MD, USA
| | - Peter Leimgruber
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, Front Royal, VA, USA
| | - Thomas Mueller
- Senckenberg Biodiversity and Climate Research Centre, Frankfurt, Germany.,Department of Biological Sciences, University Frankfurt, Frankfurt, Germany
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33
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Wiesel I, Karthun-Strijbos S, Jänecke I. The Use of GPS Telemetry Data to Study Parturition, Den Location and Occupancy in the Brown Hyaena. AFRICAN JOURNAL OF WILDLIFE RESEARCH 2019. [DOI: 10.3957/056.049.0001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- Ingrid Wiesel
- Brown Hyena Research Project, P. O. Box 739, Lüderitz, Namibia
| | | | - Inga Jänecke
- Brown Hyena Research Project, P. O. Box 739, Lüderitz, Namibia
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34
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Noonan MJ, Tucker MA, Fleming CH, Akre TS, Alberts SC, Ali AH, Altmann J, Antunes PC, Belant JL, Beyer D, Blaum N, Böhning‐Gaese K, Cullen L, Paula RC, Dekker J, Drescher‐Lehman J, Farwig N, Fichtel C, Fischer C, Ford AT, Goheen JR, Janssen R, Jeltsch F, Kauffman M, Kappeler PM, Koch F, LaPoint S, Markham AC, Medici EP, Morato RG, Nathan R, Oliveira‐Santos LGR, Olson KA, Patterson BD, Paviolo A, Ramalho EE, Rösner S, Schabo DG, Selva N, Sergiel A, Xavier da Silva M, Spiegel O, Thompson P, Ullmann W, Zięba F, Zwijacz‐Kozica T, Fagan WF, Mueller T, Calabrese JM. A comprehensive analysis of autocorrelation and bias in home range estimation. ECOL MONOGR 2019. [DOI: 10.1002/ecm.1344] [Citation(s) in RCA: 80] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Michael J. Noonan
- Smithsonian Conservation Biology Institute National Zoological Park 1500 Remount Road Front Royal Virginia 22630 USA
- Department of Biology University of Maryland College Park Maryland 20742 USA
| | - Marlee A. Tucker
- Senckenberg Biodiversity and Climate Research Centre Senckenberg Gesellschaft für Naturforschung Senckenberganlage 25 60325 Frankfurt (Main) Germany
- Department of Biological Sciences Goethe University Max‐von‐Laue‐Straße 9 60438 Frankfurt (Main) Germany
| | - Christen H. Fleming
- Smithsonian Conservation Biology Institute National Zoological Park 1500 Remount Road Front Royal Virginia 22630 USA
- Department of Biology University of Maryland College Park Maryland 20742 USA
| | - Thomas S. Akre
- Smithsonian Conservation Biology Institute National Zoological Park 1500 Remount Road Front Royal Virginia 22630 USA
| | - Susan C. Alberts
- Departments of Biology and Evolutionary Anthropology Duke University Durham North Carolina 27708 USA
| | | | - Jeanne Altmann
- Department of Ecology and Evolution Princeton University Princeton New Jersey 08544 USA
| | - Pamela Castro Antunes
- Department of Ecology Federal University of Mato Grosso do Sul Campo Grande MS 79070‐900 Brazil
| | - Jerrold L. Belant
- Camp Fire Program in Wildlife Conservation College of Environmental Science and Forestry State University of New York Syracuse New York 13210 USA
| | - Dean Beyer
- Conservation Ecology Faculty of Biology Philipps‐University Marburg Karl‐von‐Frisch Straße 8 Marburg D‐35043 Germany
| | - Niels Blaum
- Plant Ecology and Nature Conservation University of Potsdam Am Mühlenberg 3 14476 Potsdam Germany
| | - Katrin Böhning‐Gaese
- Senckenberg Biodiversity and Climate Research Centre Senckenberg Gesellschaft für Naturforschung Senckenberganlage 25 60325 Frankfurt (Main) Germany
- Department of Biological Sciences Goethe University Max‐von‐Laue‐Straße 9 60438 Frankfurt (Main) Germany
| | - Laury Cullen
- Instituto de Pesquisas Ecológicas Nazare Paulista Rod. Dom Pedro I, km 47 Caixa Postal 47 ‐ 12960‐000 Nazaré Paulista SP Brazil
| | - Rogerio Cunha Paula
- National Research Center for Carnivores Conservation Chico Mendes Institute for the Conservation of Biodiversity Estrada Municipal Hisaichi Takebayashi 8600 Atibaia SP 12952‐011 Brazil
| | - Jasja Dekker
- Jasja Dekker Dierecologie Enkhuizenstraat 26 6843 WZ Arnhem The Netherlands
| | - Jonathan Drescher‐Lehman
- Smithsonian Conservation Biology Institute National Zoological Park 1500 Remount Road Front Royal Virginia 22630 USA
- Department of Biology George Mason University 4400 University Drive Fairfax Virginia 22030 USA
| | - Nina Farwig
- Michigan Department of Natural Resources 1990 U.S. 41 South Marquette Michigan 49855 USA
| | - Claudia Fichtel
- Behavioral Ecology & Sociobiology Unit German Primate Center Kellnerweg 4 37077 Göttingen Germany
| | - Christina Fischer
- Restoration Ecology Department of Ecology and Ecosystem Management Technische Universität München Emil‐Ramann‐Straße 6 85354 Freising Germany
| | - Adam T. Ford
- Department of Biology University of British Columbia 1177 Research Road Kelowna British Columbia V1V 1V7 Canada
| | - Jacob R. Goheen
- Department of Zoology and Physiology University of Wyoming Laramie Wyoming 82071 USA
| | - René Janssen
- Bionet Natuuronderzoek Valderstraat 39 6171EL Stein The Netherlands
| | - Florian Jeltsch
- Plant Ecology and Nature Conservation University of Potsdam Am Mühlenberg 3 14476 Potsdam Germany
| | - Matthew Kauffman
- U.S. Geological Survey Wyoming Cooperative Fish and Wildlife Research Unit Department of Zoology and Physiology University of Wyoming Laramie Wyoming 82071 USA
| | - Peter M. Kappeler
- Behavioral Ecology & Sociobiology Unit German Primate Center Kellnerweg 4 37077 Göttingen Germany
| | - Flávia Koch
- Behavioral Ecology & Sociobiology Unit German Primate Center Kellnerweg 4 37077 Göttingen Germany
| | - Scott LaPoint
- Max Planck Institute for Ornithology, Vogelwarte Radolfzell Am Obstberg 1 D‐78315 Radolfzell Germany
- Lamont‐Doherty Earth Observatory Columbia University Palisades New York 10964 USA
| | - A. Catherine Markham
- Department of Anthropology Stony Brook University Stony Brook New York 11794 USA
| | - Emilia Patricia Medici
- Lowland Tapir Conservation Initiative (LTCI) Instituto de Pesquisas Ecologicas (IPE) & IUCN SSC Tapir Specialist Group (TSG) Rua Licuala 622, Damha 1, CEP: 79046‐150 Campo Grande Mato Grosso do Sul Brazil
| | - Ronaldo G. Morato
- National Research Center for Carnivores Conservation Chico Mendes Institute for the Conservation of Biodiversity Estrada Municipal Hisaichi Takebayashi 8600 Atibaia SP 12952‐011 Brazil
- Institute for the Conservation of Neotropical Carnivores – Pro‐Carnívoros Atibaia SP 12945‐010 Brazil
| | - Ran Nathan
- Movement Ecology Laboratory Department of Ecology, Evolution and Behavior Alexander Silberman Institute of Life Sciences The Hebrew University of Jerusalem Edmond J. Safra Campus Jerusalem 91904 Israel
| | | | - Kirk A. Olson
- Smithsonian Conservation Biology Institute National Zoological Park 1500 Remount Road Front Royal Virginia 22630 USA
- Wildlife Conservation Society Mongolia Program 201 San Business Center Amar Street 29, Small Ring Road, Sukhbaatar District Post 20A, Box‐21 Ulaanbaatar Mongolia
| | - Bruce D. Patterson
- Integrative Research Center Field Museum of Natural History Chicago Illinois 60605 USA
| | - Agustin Paviolo
- Instituto de Biología Subtropical Universidad Nacional de Misiones and CONICET Bertoni 85 3370 Puerto Iguazú Misiones Argentina
| | - Emiliano Esterci Ramalho
- Institute for the Conservation of Neotropical Carnivores – Pro‐Carnívoros Atibaia SP 12945‐010 Brazil
- Instituto de Desenvolvimento Sustentável Mamirauá Estrada do Bexiga, 2.584 Bairro Fonte Boa Caixa Postal 38 69.553‐225 Tefé Amazonas Brazil
| | - Sascha Rösner
- Michigan Department of Natural Resources 1990 U.S. 41 South Marquette Michigan 49855 USA
| | - Dana G. Schabo
- Michigan Department of Natural Resources 1990 U.S. 41 South Marquette Michigan 49855 USA
| | - Nuria Selva
- Institute of Nature Conservation Polish Academy of Sciences Mickiewicza 33 31‐120 Krakow Poland
| | - Agnieszka Sergiel
- Institute of Nature Conservation Polish Academy of Sciences Mickiewicza 33 31‐120 Krakow Poland
| | - Marina Xavier da Silva
- Projeto Carnívoros do Iguaçu Parque Nacional do Iguaçu BR‐469, Km 22.5, CEP 85851‐970 Foz do Iguaçu PR Brazil
| | - Orr Spiegel
- School of Zoology Faculty of Life Sciences Tel Aviv University Tel Aviv 69978 Israel
| | - Peter Thompson
- Department of Biology University of Maryland College Park Maryland 20742 USA
| | - Wiebke Ullmann
- Plant Ecology and Nature Conservation University of Potsdam Am Mühlenberg 3 14476 Potsdam Germany
| | - Filip Zięba
- Tatra National Park Kuźnice 1 34‐500 Zakopane Poland
| | | | - William F. Fagan
- Department of Biology University of Maryland College Park Maryland 20742 USA
| | - Thomas Mueller
- Senckenberg Biodiversity and Climate Research Centre Senckenberg Gesellschaft für Naturforschung Senckenberganlage 25 60325 Frankfurt (Main) Germany
- Department of Biological Sciences Goethe University Max‐von‐Laue‐Straße 9 60438 Frankfurt (Main) Germany
| | - Justin M. Calabrese
- Smithsonian Conservation Biology Institute National Zoological Park 1500 Remount Road Front Royal Virginia 22630 USA
- Department of Biology University of Maryland College Park Maryland 20742 USA
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35
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Tsalyuk M, Kilian W, Reineking B, Getz WM. Temporal variation in resource selection of African elephants follows long‐term variability in resource availability. ECOL MONOGR 2019. [DOI: 10.1002/ecm.1348] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Miriam Tsalyuk
- Department of Environmental Sciences, Policy & Management University of California Berkeley 130 Mulford Hall #3114 Berkeley California 94720‐3114 USA
| | - Werner Kilian
- Etosha Ecological Institute PO Box 6 Okaukuejo via Outjo Namibia
| | - Björn Reineking
- Universite Grenoble Alpes, Irstea, UR LESSEM, BP 76 38402 St‐Martin‐d'Hères France
- Biogeographical Modelling Bayreuth Center for Ecology and Environmental Research BayCEER University of Bayreuth Universitätstraße 30 95447 Bayreuth Germany
| | - Wayne Marcus Getz
- Department of Environmental Sciences, Policy & Management University of California Berkeley 130 Mulford Hall #3114 Berkeley California 94720‐3114 USA
- School of Mathematical Sciences University of KwaZulu‐Natal Private Bag X54001 Durban 4000 South Africa
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36
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Montgomery RA, Redilla KM, Moll RJ, Van Moorter B, Rolandsen CM, Millspaugh JJ, Solberg EJ. Movement modeling reveals the complex nature of the response of moose to ambient temperatures during summer. J Mammal 2019. [DOI: 10.1093/jmammal/gyy185] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Robert A Montgomery
- Research on the Ecology of Carnivores and their Prey Laboratory, Department of Fisheries and Wildlife, Michigan State University, MI, USA
| | - Kyle M Redilla
- Research on the Ecology of Carnivores and their Prey Laboratory, Department of Fisheries and Wildlife, Michigan State University, MI, USA
| | - Remington J Moll
- Research on the Ecology of Carnivores and their Prey Laboratory, Department of Fisheries and Wildlife, Michigan State University, MI, USA
| | - Bram Van Moorter
- Terrestrial Department, Norwegian Institute for Nature Research (NINA), Trondheim, Norway
| | - Christer M Rolandsen
- Terrestrial Department, Norwegian Institute for Nature Research (NINA), Trondheim, Norway
| | | | - Erling J Solberg
- Terrestrial Department, Norwegian Institute for Nature Research (NINA), Trondheim, Norway
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The role of habitat configuration in shaping social structure: a gap in studies of animal social complexity. Behav Ecol Sociobiol 2019. [DOI: 10.1007/s00265-018-2602-7] [Citation(s) in RCA: 82] [Impact Index Per Article: 16.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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Miller HJ, Dodge S, Miller J, Bohrer G. Towards an Integrated Science of Movement: Converging Research on Animal Movement Ecology and Human Mobility Science. INTERNATIONAL JOURNAL OF GEOGRAPHICAL INFORMATION SCIENCE : IJGIS 2019; 33:855-876. [PMID: 33013182 PMCID: PMC7531019 DOI: 10.1080/13658816.2018.1564317] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2018] [Accepted: 12/25/2018] [Indexed: 05/29/2023]
Abstract
There is long-standing scientific interest in understanding purposeful movement by animals and humans. Traditionally, collecting data on individual moving entities was difficult and time-consuming, limiting scientific progress. The growth of location-aware and other geospatial technologies for capturing, managing and analyzing moving objects data are shattering these limitations, leading to revolutions in animal movement ecology and human mobility science. Despite parallel transitions towards massive individual-level data collected automatically via sensors, there is little scientific cross-fertilization across the animal and human divide. There are potential synergies from converging these separate domains towards an integrated science of movement. This paper discusses the data-driven revolutions in the animal movement ecology and human mobility science, their contrasting worldviews and, as examples of complementarity, transdisciplinary questions that span both fields. We also identify research challenges that should be met to develop an integrated science of movement trajectories.
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Affiliation(s)
- Harvey J Miller
- Department of Geography and Center for Urban and Regional Analysis (CURA), The Ohio State University
| | - Somayeh Dodge
- Department of Geography, Environment and Society, University of Minnesota
| | - Jennifer Miller
- Department of Geography and the Environment, The University of Texas at Austin
| | - Gil Bohrer
- Department of Civil, Environmental and Geodetic Engineering, The Ohio State University
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Day CC, McCann NP, Zollner PA, Gilbert JH, MacFarland DM. Temporal plasticity in habitat selection criteria explains patterns of animal dispersal. Behav Ecol 2019; 30:528-540. [PMID: 30971861 PMCID: PMC6450207 DOI: 10.1093/beheco/ary193] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2018] [Revised: 09/21/2018] [Accepted: 12/14/2018] [Indexed: 11/15/2022] Open
Abstract
Patterns of dispersal behavior are often driven by the composition and configuration of suitable habitat in a matrix of unsuitable habitat. Interactions between animal behavior and landscapes can therefore influence population dynamics, population and species distributions, population genetic structure, and the evolution of behavior. Spatially explicit individual-based models (IBMs) are ideal tools for exploring the effects of landscape structure on dispersal. We developed an empirically parameterized IBM in the modeling framework SEARCH to simulate dispersal of translocated American martens in Wisconsin. We tested the hypothesis that a time-limited disperser should be willing to settle in lower quality habitat over time. To evaluate model performance, we used a pattern-oriented modeling approach. Our best model matched all empirical dispersal patterns (e.g., dispersal distance) except time to settlement. This model incorporated a required search phase as well as the mechanism for declining habitat selectivity over time, which represents the first demonstration of this hypothesis for a vertebrate species. We suggest that temporal plasticity in habitat selectivity allows individuals to maximize fitness by making a tradeoff between habitat quality and risk of mortality. Our IBM is pragmatic in that it addresses a management need for a species of conservation concern. However, our model is also paradigmatic in that we explicitly tested a theory of dispersal behavior. Linking these 2 approaches to ecological modeling can further the utility of individual-based modeling and provide direction for future theoretical and empirical work on animal behavior.
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Affiliation(s)
- Casey C Day
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
| | - Nicholas P McCann
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
| | - Patrick A Zollner
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
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Goodall VL, Ferreira SM, Funston PJ, Maruping-Mzileni N. Uncovering hidden states in African lion movement data using hidden Markov models. WILDLIFE RESEARCH 2019. [DOI: 10.1071/wr18004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Context
Direct observations of animals are the most reliable way to define their behavioural characteristics; however, to obtain these observations is costly and often logistically challenging. GPS tracking allows finer-scale interpretation of animal responses by measuring movement patterns; however, the true behaviour of the animal during the period of observation is seldom known.
Aims
The aim of our research was to draw behavioural inferences for a lioness with a hidden Markov model and to validate the predicted latent-state sequence with field observations of the lion pride.
Methods
We used hidden Markov models to model the movement of a lioness in the Kruger National Park, South Africa. A three-state log-normal model was selected as the most suitable model. The model outputs are related to collected data by using an observational model, such as, for example, a distribution for the average movement rate and/or direction of movement that depends on the underlying model states that are taken to represent behavioural states of the animal. These inferred behavioural states are validated against direct observation of the pride’s behaviour.
Key results
Average movement rate provided a useful alternative for the application of hidden Markov models to irregularly spaced GPS locations. The movement model predicted resting as the dominant activity throughout the day, with a peak in the afternoon. The local-movement state occurred consistently throughout the day, with a decreased proportion during the afternoon, when more resting takes place, and an increase towards the early evening. The relocating state had three peaks, namely, during mid-morning, early evening and about midnight. Because of the differences in timing of the direct observations and the GPS locations, we had to compare point observations of the true behaviour with an interval prediction of the modelled behavioural state. In 75% of the cases, the model-predicted behaviour and the field-observed behaviour overlapped.
Conclusions
Our data suggest that the hidden Markov modelling approach is successful at predicting a realistic behaviour of lions on the basis of the GPS location coordinates and the average movement rate between locations. The present study provided a unique opportunity to uncover the hidden states and compare the true behaviour with the inferred behaviour from the predicted state sequence.
Implications
Our results illustrated the potential of using hidden Markov models with movement rate as an input to understand carnivore behavioural patterns that could inform conservation management practices.
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Karelus DL, McCown JW, Scheick BK, van de Kerk M, Bolker BM, Oli MK. Incorporating movement patterns to discern habitat selection: black bears as a case study. WILDLIFE RESEARCH 2019. [DOI: 10.1071/wr17151] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Context Animals’ use of space and habitat selection emerges from their movement patterns, which are, in turn, determined by their behavioural or physiological states and extrinsic factors. Aim The aims of the present study were to investigate animal movement and incorporate the movement patterns into habitat selection analyses using Global Positioning System (GPS) location data from 16 black bears (Ursus americanus) in a fragmented area of Florida, USA. Methods Hidden Markov models (HMMs) were used to discern the movement patterns of the bears. These results were then used in step-selection functions (SSFs) to evaluate habitat selection patterns and the factors influencing these patterns. Key results HMMs revealed that black bear movement patterns are best described by three behavioural states: (1) resting (very short step-lengths and large turning angles); (2) encamped (moderate step-lengths and large turning angles); and (3) exploratory (long step-lengths and small turning angles). Bears selected for forested wetlands and marsh wetlands more than any other land cover type, and generally avoided urban areas in all seasons and when in encamped and exploratory behavioural states. Bears also chose to move to locations farther away from major roads. Conclusions Because habitat selection is influenced by how animals move within landscapes, it is essential to consider animals’ movement patterns when making inferences about habitat selection. The present study achieves this goal by using HMMs to first discern black bear movement patterns and associated parameters, and by using these results in SSFs to investigate habitat selection patterns. Thus, the methodological framework developed in this study effectively incorporates state-specific movement patterns while making inferences regarding habitat selection. The unified methodological approach employed here will contribute to an improved understanding of animal ecology as well as informed management decisions. Implications Conservation plans focused on preserving forested wetlands would benefit bears by not only providing habitat for resting and foraging, but also by providing connectivity through fragmented landscapes. Additionally, the framework could be applied to species that follow annual cycles and may provide a tool for investigating how animals are using dispersal corridors.
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Hooten MB, Scharf HR, Morales JM. Running on empty: recharge dynamics from animal movement data. Ecol Lett 2018; 22:377-389. [PMID: 30548152 DOI: 10.1111/ele.13198] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Revised: 08/25/2018] [Accepted: 11/14/2018] [Indexed: 02/06/2023]
Abstract
Vital rates such as survival and recruitment have always been important in the study of population and community ecology. At the individual level, physiological processes such as energetics are critical in understanding biomechanics and movement ecology and also scale up to influence food webs and trophic cascades. Although vital rates and population-level characteristics are tied with individual-level animal movement, most statistical models for telemetry data are not equipped to provide inference about these relationships because they lack the explicit, mechanistic connection to physiological dynamics. We present a framework for modelling telemetry data that explicitly includes an aggregated physiological process associated with decision making and movement in heterogeneous environments. Our framework accommodates a wide range of movement and physiological process specifications. We illustrate a specific model formulation in continuous-time to provide direct inference about gains and losses associated with physiological processes based on movement. Our approach can also be extended to accommodate auxiliary data when available. We demonstrate our model to infer mountain lion (Puma concolor; in Colorado, USA) and African buffalo (Syncerus caffer; in Kruger National Park, South Africa) recharge dynamics.
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Affiliation(s)
- Mevin B Hooten
- U.S. Geological Survey, Colorado Cooperative Fish and Wildlife Research Unit, Department of Fish, Wildlife, and Conservation and Department of Statistics, Colorado State University, Fort Collins, CO, 80523, USA
| | - Henry R Scharf
- Department of Statistics, Colorado State University, Fort Collins, CO, 80523, USA
| | - Juan M Morales
- Grupo de Ecología Cuantitativa, INIBIOMA, Universidad Nacional del Comahue, CONICET, Bariloche S4140, Argentina
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Wato YA, Prins HHT, Heitkönig IMA, Wahungu GM, Ngene SM, Njumbi S, van Langevelde F. Movement Patterns of African Elephants (Loxodonta africana) in a Semi-arid Savanna Suggest That They Have Information on the Location of Dispersed Water Sources. Front Ecol Evol 2018. [DOI: 10.3389/fevo.2018.00167] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Delciellos AC, Prevedello JA, Ribeiro SE, Cerqueira R, Vieira MV. Negative or positive density-dependence in movements depends on climatic seasons: The case of a Neotropical marsupial. AUSTRAL ECOL 2018. [DOI: 10.1111/aec.12666] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Affiliation(s)
- Ana Cláudia Delciellos
- Departamento de Ecologia; Laboratório de Vertebrados; Universidade Federal do Rio de Janeiro; CP 68020, Ilha do Fundão Rio de Janeiro RJ CEP 21941-902 Brazil
| | - Jayme Augusto Prevedello
- Departamento de Ecologia; Laboratório de Ecologia de Paisagens; Universidade do Estado do Rio de Janeiro; Rio de Janeiro RJ Brazil
| | - Suzy Emidio Ribeiro
- Departamento de Ecologia; Laboratório de Vertebrados; Universidade Federal do Rio de Janeiro; CP 68020, Ilha do Fundão Rio de Janeiro RJ CEP 21941-902 Brazil
| | - Rui Cerqueira
- Departamento de Ecologia; Laboratório de Vertebrados; Universidade Federal do Rio de Janeiro; CP 68020, Ilha do Fundão Rio de Janeiro RJ CEP 21941-902 Brazil
| | - Marcus Vinícius Vieira
- Departamento de Ecologia; Laboratório de Vertebrados; Universidade Federal do Rio de Janeiro; CP 68020, Ilha do Fundão Rio de Janeiro RJ CEP 21941-902 Brazil
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Silva I, Crane M, Suwanwaree P, Strine C, Goode M. Using dynamic Brownian Bridge Movement Models to identify home range size and movement patterns in king cobras. PLoS One 2018; 13:e0203449. [PMID: 30226846 PMCID: PMC6143228 DOI: 10.1371/journal.pone.0203449] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Accepted: 08/21/2018] [Indexed: 11/25/2022] Open
Abstract
Home range estimators are a critical component for understanding animal spatial ecology. The choice of home range estimator in spatial ecology studies can significantly influence management and conservation actions, as different methods lead to vastly different interpretations of movement patterns, habitat selection, as well as home range requirements. Reptile studies in particular have struggled to reach a consensus on the appropriate home range estimators to use, and species with cryptic behavior make home range assessment difficult. We applied dynamic Brownian Bridge Movement Models (dBBMMs) to radio-telemetry data from Ophiophagus hannah, a wide-ranging snake species. We used two focal individuals at different life stages (one juvenile male and one adult male) and sought to identify whether the method would accurately represent both their home range and movement patterns. To assess the suitability of dBBMMs, we compared this novel method with traditional home range estimation methods: minimum convex polygons (MCP) and Kernel density estimators (KDE). Both KDE and MCP incorporated higher levels of Type I and Type II errors, which would lead to biases in our understanding of this species space-use and habitat selection. Although these methods identified some general spatial-temporal patterns, dBBMMs were more efficient at detecting movement corridors and accurately representing long-term shelters sites, showing an improvement over methods traditionally favored in reptile studies. The additional flexibility of the dBBMM approach in providing insight into movement patterns can help further improve conservation and management actions. Additionally, our results suggest that dBBMMs may be more widely applicable in studies that rely on VHF telemetry and not limited to studies employing GPS tags.
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Affiliation(s)
- Inês Silva
- School of Bioresources and Technology, King Mongkut’s University of Technology Thonburi, Bangkok, Thailand
| | - Matthew Crane
- School of Biology, Suranaree University of Technology, Nakhon Ratchasima, Thailand
| | - Pongthep Suwanwaree
- School of Biology, Suranaree University of Technology, Nakhon Ratchasima, Thailand
| | - Colin Strine
- School of Biology, Suranaree University of Technology, Nakhon Ratchasima, Thailand
- * E-mail:
| | - Matt Goode
- School of Natural Resources and the Environment, University of Arizona, Tucson, Arizona, United States of America
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Humpback whale migrations to Antarctic summer foraging grounds through the southwest Pacific Ocean. Sci Rep 2018; 8:12333. [PMID: 30120303 PMCID: PMC6098068 DOI: 10.1038/s41598-018-30748-4] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2018] [Accepted: 07/31/2018] [Indexed: 02/05/2023] Open
Abstract
Humpback whale (Megaptera novaeangliae) populations typically undertake seasonal migrations, spending winters in low latitude breeding grounds and summers foraging in high latitude feeding grounds. Until recently, a broad scale understanding of whale movement has been derived from whaling records, Discovery marks, photo identification and genetic analyses. However, with advances in satellite tagging technology and concurrent development of analytical methodologies we can now detail finer scale humpback whale movement, infer behavioural context and examine how these animals interact with their physical environment. Here we describe the temporal and spatial characteristics of migration along the east Australian seaboard and into the Southern Ocean by 30 humpback whales satellite tagged over three consecutive austral summers. We characterise the putative Antarctic feeding grounds and identify supplemental foraging within temperate, migratory corridors. We demonstrate that Antarctic foraging habitat is associated with the marginal ice zone, with key predictors of inferred foraging behaviour including distance from the ice edge, ice melt rate and variability in ice concentration two months prior to arrival. We discuss the highly variable ice season within the putative foraging habitat and the implications that this and other environmental factors may have on the continued strong recovery of this humpback whale population.
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Maag N, Cozzi G, Clutton-Brock T, Ozgul A. Density-dependent dispersal strategies in a cooperative breeder. Ecology 2018; 99:1932-1941. [DOI: 10.1002/ecy.2433] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/18/2018] [Revised: 05/31/2018] [Accepted: 06/11/2018] [Indexed: 11/09/2022]
Affiliation(s)
- Nino Maag
- Department of Evolutionary Biology and Environmental Studies; University of Zurich; Winterthurerstrasse 190 Zurich CH-8057 Switzerland
- Kalahari Research Centre; Kuruman River Reserve Van Zylsrus 8467 South Africa
| | - Gabriele Cozzi
- Department of Evolutionary Biology and Environmental Studies; University of Zurich; Winterthurerstrasse 190 Zurich CH-8057 Switzerland
- Kalahari Research Centre; Kuruman River Reserve Van Zylsrus 8467 South Africa
| | - Tim Clutton-Brock
- Kalahari Research Centre; Kuruman River Reserve Van Zylsrus 8467 South Africa
- Department of Zoology; University of Cambridge; Downing Street Cambridge CB2 3EJ United Kingdom
| | - Arpat Ozgul
- Department of Evolutionary Biology and Environmental Studies; University of Zurich; Winterthurerstrasse 190 Zurich CH-8057 Switzerland
- Kalahari Research Centre; Kuruman River Reserve Van Zylsrus 8467 South Africa
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van Beest FM, Teilmann J, Dietz R, Galatius A, Mikkelsen L, Stalder D, Sveegaard S, Nabe-Nielsen J. Environmental drivers of harbour porpoise fine-scale movements. MARINE BIOLOGY 2018; 165:95. [PMID: 29725140 PMCID: PMC5924767 DOI: 10.1007/s00227-018-3346-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2017] [Accepted: 04/04/2018] [Indexed: 06/08/2023]
Abstract
Quantifying intraspecific variation in movement behaviour of marine predators and the underlying environmental drivers is important to inform conservation management of protected species. Here, we provide the first empirical data on fine-scale movements of free-ranging harbour porpoises (Phocoena phocoena) in their natural habitat. Data were obtained from six individuals, tagged in two areas of the Danish North Sea, that were equipped with Global Positioning System (GPS) and dive recorder units (V-tags). We used multi-model inference and model averaging to evaluate the relative importance of various static and dynamic environmental conditions on the movement characteristics: speed, turning angle, dive duration, dive depth, dive wiggliness (a proxy for prey chasing behaviour), and post-dive duration. Despite substantial individual differences in horizontal and vertical movement patterns, we found that all the tracked porpoises responded similar to variation in environmental conditions and displayed movements that indicate a higher likelihood of foraging behaviour in shallower and more saline waters. Our study contributes to the identification of important feeding areas for porpoises and can be used to improve existing movement-based simulation models that aim to assess the impact of anthropogenic disturbance on harbour porpoise populations.
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Affiliation(s)
- Floris M. van Beest
- Department of Bioscience, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark
| | - Jonas Teilmann
- Department of Bioscience, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark
| | - Rune Dietz
- Department of Bioscience, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark
| | - Anders Galatius
- Department of Bioscience, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark
| | - Lonnie Mikkelsen
- Department of Bioscience, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark
| | - Dominique Stalder
- Department of Bioscience, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark
| | - Signe Sveegaard
- Department of Bioscience, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark
| | - Jacob Nabe-Nielsen
- Department of Bioscience, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark
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Deriving Animal Movement Behaviors Using Movement Parameters Extracted from Location Data. ISPRS INTERNATIONAL JOURNAL OF GEO-INFORMATION 2018. [DOI: 10.3390/ijgi7020078] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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50
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Cozzi G, Maag N, Börger L, Clutton-Brock TH, Ozgul A. Socially informed dispersal in a territorial cooperative breeder. J Anim Ecol 2018; 87:838-849. [DOI: 10.1111/1365-2656.12795] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2017] [Accepted: 12/09/2017] [Indexed: 11/30/2022]
Affiliation(s)
- Gabriele Cozzi
- Department of Evolutionary Biology and Environmental Studies; Zurich University; Zürich Switzerland
- Kalahari Research Centre; Kuruman River Reserve; Northern Cape South Africa
| | - Nino Maag
- Department of Evolutionary Biology and Environmental Studies; Zurich University; Zürich Switzerland
- Kalahari Research Centre; Kuruman River Reserve; Northern Cape South Africa
| | - Luca Börger
- Department of Biosciences; College of Science; Swansea University; Swansea UK
| | - Tim H. Clutton-Brock
- Kalahari Research Centre; Kuruman River Reserve; Northern Cape South Africa
- Department of Zoology; Cambridge University; Cambridge UK
| | - Arpat Ozgul
- Department of Evolutionary Biology and Environmental Studies; Zurich University; Zürich Switzerland
- Kalahari Research Centre; Kuruman River Reserve; Northern Cape South Africa
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