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Howell EK, Nolfo-Clements LE, Payseur BA. Population History Across Timescales in an Urban Archipelago. Genome Biol Evol 2025; 17:evaf048. [PMID: 40111249 PMCID: PMC11968337 DOI: 10.1093/gbe/evaf048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2024] [Revised: 03/04/2025] [Accepted: 03/09/2025] [Indexed: 03/22/2025] Open
Abstract
Contemporary patterns of genetic variation reflect the cumulative history of a population. Population splitting, migration, and changes in population size leave genomic signals that enable their characterization. Existing methods aimed at reconstructing these features of demographic history are often restricted in their temporal resolution, leaving gaps about how basic evolutionary parameters change over time. To illustrate the prospects for extracting insights about dynamic population histories, we turn to a system that has undergone dramatic changes on both geological and contemporary timescales-an urbanized, near-shore archipelago. Using whole genome sequences, we employed both common and novel summaries of variation to infer the demographic history of three populations of endemic white-footed mice (Peromyscus leucopus) in Massachusetts' Boston Harbor. We find informative contrasts among the inferences drawn from these distinct patterns of diversity. While demographic models that fit the joint site frequency spectrum (jSFS) coincide with the known geological history of the Boston Harbor, patterns of linkage disequilibrium reveal collapses in population size on contemporary timescales that are not recovered by our jSFS-derived models. Historical migration between populations is also absent from best-fitting models for the jSFS, but rare variants show unusual clustering along the genome within individual mice, a novel pattern that is reproduced by simulations of recent migration. Together, our findings indicate that these urban archipelago populations have been shaped by both ancient geological processes and recent human influence. More broadly, our study demonstrates that the temporal resolution of demographic history can be extended by examining multiple facets of genomic variation.
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Affiliation(s)
- Emma K Howell
- Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI, USA
| | | | - Bret A Payseur
- Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI, USA
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2
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Howell EK, Nolfo-Clements LE, Payseur BA. Population history across timescales in an urban archipelago. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.01.24.633650. [PMID: 39896480 PMCID: PMC11785198 DOI: 10.1101/2025.01.24.633650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 02/04/2025]
Abstract
Contemporary patterns of genetic variation reflect the cumulative history of a population. Population splitting, migration, and changes in population size leave genomic signals that enable their characterization. Existing methods aimed at reconstructing these features of demographic history are often restricted in their temporal resolution, leaving gaps about how basic evolutionary parameters change over time. To illustrate the prospects for extracting insights about dynamic population histories, we turn to a system that has undergone dramatic changes on both geological and contemporary timescales - an urbanized, near-shore archipelago. Using whole genome sequences, we employed both common and novel summaries of variation to infer the demographic history of three populations of endemic white-footed mice (Peromyscus leucopus) in Massachusetts' Boston Harbor. We find informative contrasts among the inferences drawn from these distinct patterns of diversity. While demographic models that fit the joint site frequency spectrum (jSFS) coincide with the known geological history of the Boston Harbor, patterns of linkage disequilibrium reveal collapses in population size on contemporary timescales that are not recovered by our candidate models. Historical migration between populations is also absent from best-fitting models for the jSFS, but rare variants show unusual clustering along the genome within individual mice, a pattern that is reproduced by simulations of recent migration. Together, our findings indicate that these urban archipelago populations have been shaped by both ancient geological processes and recent human influence. More broadly, our study demonstrates that the temporal resolution of demographic history can be extended by examining multiple facets of genomic variation.
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Affiliation(s)
- Emma K. Howell
- Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI
| | | | - Bret A. Payseur
- Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI
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3
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Nolte MJ, Payseur BA. Phenotypic and Developmental Dissection of an Instance of the Island Rule. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.01.22.634334. [PMID: 40034646 PMCID: PMC11875247 DOI: 10.1101/2025.01.22.634334] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 03/05/2025]
Abstract
Organismal body weight correlates with morphology, life history, physiology, and behavior, making it perhaps the most telling single indicator of an organism's evolutionary and ecological profile. Island populations provide an exceptional opportunity to study body weight evolution. In accord with the "island rule," insular small-bodied vertebrates often evolve larger sizes, whereas insular large-bodied vertebrates evolve smaller sizes. To understand how island populations evolve extreme sizes, we adopted a developmental perspective and compared a suite of traits with established connections to body size in the world's largest wild house mice from Gough Island and mice from a smaller-bodied mainland strain. We pinpoint 24-hour periods during the third and fifth week of age in which Gough mice gain exceptionally more weight than mainland mice. We show that Gough mice accumulate more visceral fat beginning early in postnatal development. During a burst of weight gain, Gough mice shift toward carbohydrates and away from fat as fuel, despite being more active than and consuming equivalent amounts of food as mainland mice. Our findings showcase the value of developmental phenotypic characterization for discovering how body weight evolves in the context of broader patterns of trait evolution.
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Affiliation(s)
- Mark J. Nolte
- Laboratory of Genetics, University of Wisconsin – Madison, Madison, WI 53706
| | - Bret A. Payseur
- Laboratory of Genetics, University of Wisconsin – Madison, Madison, WI 53706
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Payseur BA, Jing P, Howell EK, Frayer ME, Jones EP, Magnussen E, Jensen JK, Chan YF, Searle JB. Population Genomics of Giant Mice from the Faroe Islands: Hybridization, Colonization, and a Novel Challenge to Identifying Genomic Targets of Selection. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.01.20.633586. [PMID: 39896584 PMCID: PMC11785126 DOI: 10.1101/2025.01.20.633586] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 02/04/2025]
Abstract
Populations that colonize islands provide unique insights into demography, adaptation, and the spread of invasive species. House mice on the Faroe Islands evolved exceptionally large bodies after colonization, generating interest from biologists since Darwin. To reconstruct the evolutionary history of these mice, we sequenced genomes of population samples from three Faroe Islands (Sandoy, Nólsoy, and Mykines) and Norway as a mainland comparison. Mice from the Faroe Islands are hybrids between the subspecies Mus musculus domesticus and M. m. musculus, with ancestry alternating along the genome. Analyses based on the site frequency spectrum of single nucleotide polymorphisms and the ancestral recombination graph (ARG) indicate that mice arrived on the Faroe Islands on a timescale consistent with transport by Norwegian Vikings, with colonization of Sandoy likely preceding colonization of Nólsoy. Substantial reductions in nucleotide diversity and effective population size associated with colonization suggest that mice on the Faroe Islands evolved large body size during periods of heightened genetic drift. Genomic scans for positive selection uncover windows with unusual site frequency spectra, but this pattern is mostly generated by clusters of singletons in individual mice. Variants showing evidence of selection in both Nólsoy and Sandoy based on the ARG are enriched for genes with neurological functions. Our findings reveal a dynamic evolutionary history for the enigmatic mice from Faroe Island and emphasize the challenges that accompany population genomic inferences in island populations.
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Affiliation(s)
- Bret A Payseur
- Laboratory of Genetics, University of Wisconsin, Madison, WI 53706, USA
| | - Peicheng Jing
- Laboratory of Genetics, University of Wisconsin, Madison, WI 53706, USA
| | - Emma K Howell
- Laboratory of Genetics, University of Wisconsin, Madison, WI 53706, USA
| | - Megan E Frayer
- Laboratory of Genetics, University of Wisconsin, Madison, WI 53706, USA
| | - Eleanor P Jones
- Fera Science, The National Agri-Food Innovation Campus, Sand Hutton, York YO41 1LZ, UK
- School of Natural and Environmental Sciences, University of Newcastle, Newcastle NE1 7RU, UK
| | - Eyðfinn Magnussen
- Faculty of Science and Technology, University of the Faroe Islands, Tórshavn, Faroe Islands
| | | | - Yingguang Frank Chan
- Friedrich Miescher Laboratory of the Max Planck Society, 72076 Tübingen, Germany
- Groningen Institute for Evolutionary Life Sciences (GELIFES), University of Groningen, 9747AG Groningen, The Netherlands
| | - Jeremy B Searle
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA
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5
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Gabriel SI, Hughes JJ, Herman JS, Baines JF, Giménez MD, Gray MM, Hardouin EA, Payseur BA, Ryan PG, Sánchez-Chardi A, Ulrich RG, Mathias MDL, Searle JB. House Mice in the Atlantic Region: Genetic Signals of Their Human Transport. Genes (Basel) 2024; 15:1645. [PMID: 39766912 PMCID: PMC11675120 DOI: 10.3390/genes15121645] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2024] [Revised: 12/17/2024] [Accepted: 12/18/2024] [Indexed: 01/11/2025] Open
Abstract
BACKGROUND/OBJECTIVES The colonization history of house mice reflects the maritime history of humans that passively transported them worldwide. We investigated western house mouse colonization in the Atlantic region through studies of mitochondrial D-loop DNA sequences from modern specimens. METHODS We assembled a dataset of 758 haplotypes derived from 2765 mice from 47 countries/oceanic archipelagos (a combination of new and published data). Our maximum likelihood phylogeny recovered five previously identified clades, and we used the haplotype affinities within the phylogeny to infer house mouse colonization history, employing statistical tests and indices. From human history, we predefined four European source areas for mice in the Atlantic region (Northern Europe excluding Scandinavia, Southern Europe, Scandinavia, and Macaronesia) and we investigated the colonization from these source areas to different geographic areas in the Atlantic region. RESULTS Our inferences suggest mouse colonization of Scandinavia itself from Northern Europe, and Macaronesia from both Southern Europe and Scandinavia/Germany (the latter likely representing the transport of mice by Vikings). Mice on North Atlantic islands apparently derive primarily from Scandinavia, while for South Atlantic islands, North America, and Sub-Saharan Africa, the clearest source is Northern Europe, although mice on South Atlantic islands also had genetic inputs from Macaronesia and Southern Europe (for Tristan da Cunha). Macaronesia was a stopover for Atlantic voyages, creating an opportunity for mouse infestation. Mice in Latin America also apparently had multiple colonization sources, with a strong Southern European signal but also input from Northern Europe and/or Macaronesia. CONCLUSIONS D-loop sequences help discern the broad-scale colonization history of house mice and new perspectives on human history.
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Affiliation(s)
- Sofia I. Gabriel
- CESAM—Centro de Estudos do Ambiente e do Mar, Departamento de Biologia Animal, Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal;
| | - Jonathan J. Hughes
- Department of Evolution, Ecology & Organismal Biology, University of California Riverside, Riverside, CA 92521, USA;
| | - Jeremy S. Herman
- Department of Natural Sciences, National Museums Scotland, Edinburgh EH1 1JF, UK;
| | - John F. Baines
- Institute for Experimental Medicine, Kiel University, 24118 Kiel, Germany;
- Max Planck Institute for Evolutionary Biology, 24306 Plön, Germany
| | - Mabel D. Giménez
- IGeHM–Instituto de Genética Humana de Misiones, Parque de la Salud de la Provincia de Misiones “Dr. Ramón Madariaga”, CONICET, Posadas N3300KAZ, Argentina;
- Facultad de Ciencias Exactas, Químicas y Naturales, Universidad Nacional de Misiones, Posadas N3300LQH, Argentina
| | - Melissa M. Gray
- Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI 53706, USA; (M.M.G.); (B.A.P.)
| | - Emilie A. Hardouin
- Department of Life and Environmental Sciences, Bournemouth University, Poole BH12 5BB, UK;
| | - Bret A. Payseur
- Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI 53706, USA; (M.M.G.); (B.A.P.)
| | - Peter G. Ryan
- FitzPatrick Institute of African Ornithology, University of Cape Town, Rondebosch 7701, South Africa;
| | - Alejandro Sánchez-Chardi
- Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona, 08028 Barcelona, Spain;
| | - Rainer G. Ulrich
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, 17493 Greifswald-Insel Riems, Germany;
- Partner Site Hamburg-Lübeck-Borstel-Riems, German Centre for Infection Research (DZIF), 17493 Greifswald-Insel Riems, Germany
| | - Maria da Luz Mathias
- CESAM—Centro de Estudos do Ambiente e do Mar, Departamento de Biologia Animal, Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal;
| | - Jeremy B. Searle
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA
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Benítez-López A, Santini L, Gallego-Zamorano J, Milá B, Walkden P, Huijbregts MAJ, Tobias JA. The island rule explains consistent patterns of body size evolution in terrestrial vertebrates. Nat Ecol Evol 2021; 5:768-786. [PMID: 33859376 DOI: 10.1038/s41559-021-01426-y] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Accepted: 02/22/2021] [Indexed: 02/01/2023]
Abstract
Island faunas can be characterized by gigantism in small animals and dwarfism in large animals, but the extent to which this so-called 'island rule' provides a general explanation for evolutionary trajectories on islands remains contentious. Here we use a phylogenetic meta-analysis to assess patterns and drivers of body size evolution across a global sample of paired island-mainland populations of terrestrial vertebrates. We show that 'island rule' effects are widespread in mammals, birds and reptiles, but less evident in amphibians, which mostly tend towards gigantism. We also found that the magnitude of insular dwarfism and gigantism is mediated by climate as well as island size and isolation, with more pronounced effects in smaller, more remote islands for mammals and reptiles. We conclude that the island rule is pervasive across vertebrates, but that the implications for body size evolution are nuanced and depend on an array of context-dependent ecological pressures and environmental conditions.
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Affiliation(s)
- Ana Benítez-López
- Department of Environmental Science, Institute for Wetland and Water Research, Radboud University, Nijmegen, The Netherlands. .,Integrative Ecology Group, Estación Biológica de Doñana, Spanish National Research Council (CSIC), Sevilla, Spain.
| | - Luca Santini
- Department of Environmental Science, Institute for Wetland and Water Research, Radboud University, Nijmegen, The Netherlands.,Department of Biology and Biotechnologies "Charles Darwin", Sapienza University of Rome, Rome, Italy.,Institute of Research on Terrestrial Ecosystems (CNR-IRET), National Research Council, Monterotondo (Rome), Italy
| | - Juan Gallego-Zamorano
- Department of Environmental Science, Institute for Wetland and Water Research, Radboud University, Nijmegen, The Netherlands
| | - Borja Milá
- Department of Biodiversity and Evolutionary Biology, National Museum of Natural Sciences, Spanish National Research Council (CSIC), Madrid, Spain
| | - Patrick Walkden
- Department of Life Sciences, Imperial College London, Ascot, UK
| | - Mark A J Huijbregts
- Department of Environmental Science, Institute for Wetland and Water Research, Radboud University, Nijmegen, The Netherlands
| | - Joseph A Tobias
- Department of Life Sciences, Imperial College London, Ascot, UK
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7
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Oh KP, Shiels AB, Shiels L, Blondel DV, Campbell KJ, Saah JR, Lloyd AL, Thomas PQ, Gould F, Abdo Z, Godwin JR, Piaggio AJ. Population genomics of invasive rodents on islands: Genetic consequences of colonization and prospects for localized synthetic gene drive. Evol Appl 2021; 14:1421-1435. [PMID: 34025776 PMCID: PMC8127709 DOI: 10.1111/eva.13210] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2020] [Revised: 02/15/2021] [Accepted: 02/16/2021] [Indexed: 12/22/2022] Open
Abstract
Introduced rodent populations pose significant threats worldwide, with particularly severe impacts on islands. Advancements in genome editing have motivated interest in synthetic gene drives that could potentially provide efficient and localized suppression of invasive rodent populations. Application of such technologies will require rigorous population genomic surveys to evaluate population connectivity, taxonomic identification, and to inform design of gene drive localization mechanisms. One proposed approach leverages the predicted shifts in genetic variation that accompany island colonization, wherein founder effects, genetic drift, and island-specific selection are expected to result in locally fixed alleles (LFA) that are variable in neighboring nontarget populations. Engineering of guide RNAs that target LFA may thus yield gene drives that spread within invasive island populations, but would have limited impacts on nontarget populations in the event of an escape. Here we used pooled whole-genome sequencing of invasive mouse (Mus musculus) populations on four islands along with paired putative source populations to test genetic predictions of island colonization and characterize locally fixed Cas9 genomic targets. Patterns of variation across the genome reflected marked reductions in allelic diversity in island populations and moderate to high degrees of differentiation from nearby source populations despite relatively recent colonization. Locally fixed Cas9 sites in female fertility genes were observed in all island populations, including a small number with multiplexing potential. In practice, rigorous sampling of presumptive LFA will be essential to fully assess risk of resistance alleles. These results should serve to guide development of improved, spatially limited gene drive design in future applications.
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Affiliation(s)
- Kevin P. Oh
- National Wildlife Research CenterUSDA APHIS Wildlife ServicesFort CollinsColoradoUSA
- Department of Microbiology, Immunology and PathologyColorado State UniversityFort CollinsColoradoUSA
| | - Aaron B. Shiels
- National Wildlife Research CenterUSDA APHIS Wildlife ServicesFort CollinsColoradoUSA
| | - Laura Shiels
- National Wildlife Research CenterUSDA APHIS Wildlife ServicesFort CollinsColoradoUSA
| | - Dimitri V. Blondel
- Department of Biological SciencesNorth Carolina State UniversityRaleighNorth CarolinaUSA
| | - Karl J. Campbell
- Island ConservationPuerto AyoraEcuador
- School of Agriculture and Food SciencesThe University of QueenslandGattonQueenslandAustralia
| | - J. Royden Saah
- Island ConservationPuerto AyoraEcuador
- Genetic Engineering and Society CenterNorth Carolina State UniversityRaleighNorth CarolinaUSA
| | - Alun L. Lloyd
- Genetic Engineering and Society CenterNorth Carolina State UniversityRaleighNorth CarolinaUSA
- Biomathematics Graduate Program and Department of MathematicsNorth Carolina State UniversityRaleighNorth CarolinaUSA
| | - Paul Q. Thomas
- The Robinson Research Institute and School of MedicineThe University of AdelaideAdelaideSouth AustraliaAustralia
| | - Fred Gould
- Genetic Engineering and Society CenterNorth Carolina State UniversityRaleighNorth CarolinaUSA
- Department of Entomology and Plant PathologyNorth Carolina State UniversityRaleighNorth CarolinaUSA
| | - Zaid Abdo
- Department of Microbiology, Immunology and PathologyColorado State UniversityFort CollinsColoradoUSA
| | - John R. Godwin
- Department of Biological SciencesNorth Carolina State UniversityRaleighNorth CarolinaUSA
- Genetic Engineering and Society CenterNorth Carolina State UniversityRaleighNorth CarolinaUSA
| | - Antoinette J. Piaggio
- National Wildlife Research CenterUSDA APHIS Wildlife ServicesFort CollinsColoradoUSA
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8
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Wilches R, Beluch WH, McConnell E, Tautz D, Chan YF. Independent evolution toward larger body size in the distinctive Faroe Island mice. G3-GENES GENOMES GENETICS 2021; 11:6062402. [PMID: 33561246 PMCID: PMC8022703 DOI: 10.1093/g3journal/jkaa051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Accepted: 12/10/2020] [Indexed: 11/29/2022]
Abstract
Most phenotypic traits in nature involve the collective action of many genes. Traits that evolve repeatedly are particularly useful for understanding how selection may act on changing trait values. In mice, large body size has evolved repeatedly on islands and under artificial selection in the laboratory. Identifying the loci and genes involved in this process may shed light on the evolution of complex, polygenic traits. Here, we have mapped the genetic basis of body size variation by making a genetic cross between mice from the Faroe Islands, which are among the largest and most distinctive natural populations of mice in the world, and a laboratory mouse strain selected for small body size, SM/J. Using this F2 intercross of 841 animals, we have identified 111 loci controlling various aspects of body size, weight and growth hormone levels. By comparing against other studies, including the use of a joint meta-analysis, we found that the loci involved in the evolution of large size in the Faroese mice were largely independent from those of a different island population or other laboratory strains. We hypothesize that colonization bottleneck, historical hybridization, or the redundancy between multiple loci have resulted in the Faroese mice achieving an outwardly similar phenotype through a distinct evolutionary path.
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Affiliation(s)
- Ricardo Wilches
- Friedrich Miescher Laboratory of the Max Planck Society, 72076 Tübingen, Germany
| | - William H Beluch
- Friedrich Miescher Laboratory of the Max Planck Society, 72076 Tübingen, Germany
| | - Ellen McConnell
- Max Planck Institute for Evolutionary Biology, Department of Evolutionary Genetics, 24306 Plön, Germany
| | - Diethard Tautz
- Max Planck Institute for Evolutionary Biology, Department of Evolutionary Genetics, 24306 Plön, Germany
| | - Yingguang Frank Chan
- Friedrich Miescher Laboratory of the Max Planck Society, 72076 Tübingen, Germany
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9
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Puckett EE, Magnussen E, Khlyap LA, Strand TM, Lundkvist Å, Munshi-South J. Genomic analyses reveal three independent introductions of the invasive brown rat (Rattus norvegicus) to the Faroe Islands. Heredity (Edinb) 2019; 124:15-27. [PMID: 31399718 DOI: 10.1038/s41437-019-0255-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2018] [Revised: 07/10/2019] [Accepted: 07/20/2019] [Indexed: 11/09/2022] Open
Abstract
Population genomics offers innovative approaches to test hypotheses related to the source and timing of introduction of invasive species. These approaches are particularly appropriate to study colonization of island ecosystems. The brown rat is a cold-hardy global invasive that has reached most of the world's island ecosystems, including even highly isolated archipelagoes such as the Faroe Islands in the North Atlantic Ocean. Historic records tell of rats rafting to the southern island of Suðuroy in 1768 following a shipwreck off the coast of Scotland, then expanding across the archipelago. We investigated the demographic history of brown rats in the Faroes using 50,174 SNPs. We inferred three independent introductions of rats, including to Suðuroy, the islands of Borðoy and Viðoy, and onto Streymoy from which they expanded to Eysturoy and Vágar. All Faroese populations showed signs of strong bottlenecks and declining effective population size. We inferred that these founder events removed low frequency alleles, the exact data needed to estimate recent demographic histories. Therefore, we were unable to accurately estimate the timing of each invasion. The difficulties with demographic inference may be applicable to other invasive species, particularly those with extreme and recent bottlenecks. We identified three invasions of brown rats to the Faroe Islands that resulted in highly differentiated populations that will be useful for future studies of life history variation and genomic adaptation.
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Affiliation(s)
- Emily E Puckett
- Department of Biological Sciences, University of Memphis, Memphis, TN, USA. .,Louis Calder Center- Biological Field Station, Fordham University, Armonk, NY, USA.
| | - Eyðfinn Magnussen
- Faculty of Science and Technology, University of the Faroe Islands, Tórshavn, Faroe Islands
| | - Liudmila A Khlyap
- Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, Moscow, Russia
| | - Tanja M Strand
- Department of Medical Biochemistry and Microbiology, Zoonosis Science Center, Uppsala University, Uppsala, Sweden.,National Veterinary Institute (SVA), Department of Microbiology, Uppsala, Sweden
| | - Åke Lundkvist
- Department of Medical Biochemistry and Microbiology, Zoonosis Science Center, Uppsala University, Uppsala, Sweden
| | - Jason Munshi-South
- Louis Calder Center- Biological Field Station, Fordham University, Armonk, NY, USA
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10
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Parmenter MD, Nelson JP, Weigel SE, Gray MM, Payseur BA, Vinyard CJ. Masticatory Apparatus Performance and Functional Morphology in the Extremely Large Mice from Gough Island. Anat Rec (Hoboken) 2018; 303:167-179. [PMID: 30548803 DOI: 10.1002/ar.24053] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2018] [Revised: 08/14/2018] [Accepted: 09/03/2018] [Indexed: 11/07/2022]
Abstract
Since their arrival approximately 200 years ago, the house mice (Mus musculus) on Gough Island (GI) rapidly increased in size to become the largest wild house mice on record. Along with this extreme increase in body size, GI mice adopted a predatory diet, consuming significant quantities of seabird chicks and eggs. We studied this natural experiment to determine how evolution of extreme size and a novel diet impacted masticatory apparatus performance and functional morphology in these mice. We measured maximum bite force and jaw opening (i.e., gape) along with several musculoskeletal dimensions functionally linked to these performance measurements to test the hypotheses that GI mice evolved larger bite forces and jaw gapes as part of their extreme increase in size and/or novel diet. GI mice can bite more forcefully and open their jaws wider than a representative mainland strain of house mice. Similarly, GI mice have musculoskeletal features of the masticatory apparatus that are absolutely larger than WSB mice. However, when considered relative to body size or jaw length, as a relevant mechanical standard, GI mice show reduced performance, suggesting a size-related decrease in these abilities. Correspondingly, most musculoskeletal features are not relatively larger in GI mice. Incisor biting leverage and condylar dimensions are exceptions, suggesting relative increases in biting efficiency and condylar rotation in GI mice. Based on these results, we hypothesize that evolutionary enhancements in masticatory performance are correlated with the extreme increase in body size and associated musculoskeletal phenotypes in Gough Island mice. Anat Rec, 2019. © 2018 American Association for Anatomy.
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Affiliation(s)
| | - Jacob P Nelson
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin
| | - Sara E Weigel
- Department of Anatomy and Neurobiology, Northeast Ohio Medical University, Rootstown, Ohio
| | - Melissa M Gray
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin
| | - Bret A Payseur
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin
| | - Christopher J Vinyard
- Department of Anatomy and Neurobiology, Northeast Ohio Medical University, Rootstown, Ohio
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11
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Morris MRJ, Bowles E, Allen BE, Jamniczky HA, Rogers SM. Contemporary ancestor? Adaptive divergence from standing genetic variation in Pacific marine threespine stickleback. BMC Evol Biol 2018; 18:113. [PMID: 30021523 PMCID: PMC6052716 DOI: 10.1186/s12862-018-1228-8] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2017] [Accepted: 07/03/2018] [Indexed: 11/25/2022] Open
Abstract
Background Populations that have repeatedly colonized novel environments are useful for studying the role of ecology in adaptive divergence – particularly if some individuals persist in the ancestral habitat. Such “contemporary ancestors” can be used to demonstrate the effects of selection by comparing phenotypic and genetic divergence between the derived population and their extant ancestors. However, evolution and demography in these “contemporary ancestors” can complicate inferences about the source (standing genetic variation, de novo mutation) and pace of adaptive divergence. Marine threespine stickleback (Gasterosteus aculeatus) have colonized freshwater environments along the Pacific coast of North America, but have also persisted in the marine environment. To what extent are marine stickleback good proxies of the ancestral condition? Results We sequenced > 5800 variant loci in over 250 marine stickleback from eight locations extending from Alaska to California, and phenotyped them for platedness and body shape. Pairwise FST varied from 0.02 to 0.18. Stickleback were divided into five genetic clusters, with a single cluster comprising stickleback from Washington to Alaska. Plate number, Eda, body shape, and candidate loci showed evidence of being under selection in the marine environment. Comparisons to a freshwater population demonstrated that candidate loci for freshwater adaptation varied depending on the choice of marine populations. Conclusions Marine stickleback are structured into phenotypically and genetically distinct populations that have been evolving as freshwater stickleback evolved. This variation complicates their usefulness as proxies of the ancestors of freshwater populations. Lessons from stickleback may be applied to other “contemporary ancestor”-derived population studies. Electronic supplementary material The online version of this article (10.1186/s12862-018-1228-8) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Matthew R J Morris
- Department of Biology, Ambrose University, 150 Ambrose Circle SW, Calgary, AB, T3H 0L5, Canada.
| | - Ella Bowles
- Department of Biological Sciences, University of Calgary, 2500 University Dr. NW, Calgary, AB, T2N 1N4, Canada
| | - Brandon E Allen
- Department of Biological Sciences, University of Calgary, 2500 University Dr. NW, Calgary, AB, T2N 1N4, Canada
| | - Heather A Jamniczky
- McCaig Institute for Bone and Joint Health, Department of Cell Biology & Anatomy, University of Calgary, 3330 Hospital Dr. NW, Calgary, AB, T2N 4Z6, Canada
| | - Sean M Rogers
- Department of Biological Sciences, University of Calgary, 2500 University Dr. NW, Calgary, AB, T2N 1N4, Canada
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Wayne RK, George SB, Gilbert D, Collins PW, Kovach SD, Girman D, Lehman N. A MORPHOLOGIC AND GENETIC STUDY OF THE ISLAND FOX,UROCYON LITTORALIS. Evolution 2017; 45:1849-1868. [DOI: 10.1111/j.1558-5646.1991.tb02692.x] [Citation(s) in RCA: 65] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/1990] [Accepted: 04/08/1991] [Indexed: 11/28/2022]
Affiliation(s)
| | - Sarah B. George
- Section of Mammalogy; Natural History Museum of Los Angeles County; 900 Exposition Blvd. Los Angeles CA 90007 USA
| | - Dennis Gilbert
- Biological Carcinogenesis and Development Program; Program Resources Incorporated, NCI-FCRF; Frederick MD 21207 USA
| | - Paul W. Collins
- Santa Barbara Museum of Natural History; 2559 Puesta Del Sol Santa Barbara CA 93105 USA
| | - Steven D. Kovach
- Natural Resources Management Branch, Naval Facility Engineering Command; P.O. Box 727, Code 243 San Bruno CA 94066 USA
| | - Derek Girman
- Department of Biology; UCLA; Los Angeles CA 90024 USA
| | - Niles Lehman
- Department of Biology; UCLA; Los Angeles CA 90024 USA
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Pergams ORW, Ashley MV. RAPID MORPHOLOGICAL CHANGE IN CHANNEL ISLAND DEER MICE. Evolution 2017; 53:1573-1581. [PMID: 28565559 DOI: 10.1111/j.1558-5646.1999.tb05420.x] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/1998] [Accepted: 04/06/1999] [Indexed: 11/28/2022]
Affiliation(s)
- Oliver R. W. Pergams
- Department of Biological Sciences; University of Illinois at Chicago; 845 West Taylor Street Chicago Illinois 60607
| | - Mary V. Ashley
- Department of Biological Sciences; University of Illinois at Chicago; 845 West Taylor Street Chicago Illinois 60607
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Genetics of Skeletal Evolution in Unusually Large Mice from Gough Island. Genetics 2016; 204:1559-1572. [PMID: 27694627 DOI: 10.1534/genetics.116.193805] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2016] [Accepted: 09/26/2016] [Indexed: 11/18/2022] Open
Abstract
Organisms on islands often undergo rapid morphological evolution, providing a platform for understanding mechanisms of phenotypic change. Many examples of evolution on islands involve the vertebrate skeleton. Although the genetic basis of skeletal variation has been studied in laboratory strains, especially in the house mouse Mus musculus domesticus, the genetic determinants of skeletal evolution in natural populations remain poorly understood. We used house mice living on the remote Gough Island-the largest wild house mice on record-to understand the genetics of rapid skeletal evolution in nature. Compared to a mainland reference strain from the same subspecies (WSB/EiJ), the skeleton of Gough Island mice is considerably larger, with notable expansions of the pelvis and limbs. The Gough Island mouse skeleton also displays changes in shape, including elongations of the skull and the proximal vs. distal elements in the limbs. Quantitative trait locus (QTL) mapping in a large F2 intercross between Gough Island mice and WSB/EiJ reveals hundreds of QTL that control skeletal dimensions measured at 5, 10, and/or 16 weeks of age. QTL exhibit modest, mostly additive effects, and Gough Island alleles are associated with larger skeletal size at most QTL. The QTL with the largest effects are found on a few chromosomes and affect suites of skeletal traits. Many of these loci also colocalize with QTL for body weight. The high degree of QTL colocalization is consistent with an important contribution of pleiotropy to skeletal evolution. Our results provide a rare portrait of the genetic basis of skeletal evolution in an island population and position the Gough Island mouse as a model system for understanding mechanisms of rapid evolution in nature.
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Gray MM, Parmenter MD, Hogan CA, Ford I, Cuthbert RJ, Ryan PG, Broman KW, Payseur BA. Genetics of Rapid and Extreme Size Evolution in Island Mice. Genetics 2015; 201:213-28. [PMID: 26199233 PMCID: PMC4566264 DOI: 10.1534/genetics.115.177790] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2015] [Accepted: 07/18/2015] [Indexed: 12/21/2022] Open
Abstract
Organisms on islands provide a revealing window into the process of adaptation. Populations that colonize islands often evolve substantial differences in body size from their mainland relatives. Although the ecological drivers of this phenomenon have received considerable attention, its genetic basis remains poorly understood. We use house mice (subspecies: Mus musculus domesticus) from remote Gough Island to provide a genetic portrait of rapid and extreme size evolution. In just a few hundred generations, Gough Island mice evolved the largest body size among wild house mice from around the world. Through comparisons with a smaller-bodied wild-derived strain from the same subspecies (WSB/EiJ), we demonstrate that Gough Island mice achieve their exceptional body weight primarily by growing faster during the 6 weeks after birth. We use genetic mapping in large F(2) intercrosses between Gough Island mice and WSB/EiJ to identify 19 quantitative trait loci (QTL) responsible for the evolution of 16-week weight trajectories: 8 QTL for body weight and 11 QTL for growth rate. QTL exhibit modest effects that are mostly additive. We conclude that body size evolution on islands can be genetically complex, even when substantial size changes occur rapidly. In comparisons to published studies of laboratory strains of mice that were artificially selected for divergent body sizes, we discover that the overall genetic profile of size evolution in nature and in the laboratory is similar, but many contributing loci are distinct. Our results underscore the power of genetically characterizing the entire growth trajectory in wild populations and lay the foundation necessary for identifying the mutations responsible for extreme body size evolution in nature.
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Affiliation(s)
- Melissa M Gray
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin 53706
| | | | - Caley A Hogan
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin 53706
| | - Irene Ford
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin 53706
| | - Richard J Cuthbert
- Royal Society for the Protection of Birds, The Lodge, Sandy, Bedfordshire, SG19 2DL, United Kingdom
| | - Peter G Ryan
- Percy FitzPatrick Institute of African Ornithology, DST-NRF Centre of Excellence, University of Cape Town, Rondebosch 7701, South Africa
| | - Karl W Broman
- Department of Biostatistics and Medical Informatics, University of Wisconsin, Madison, Wisconsin 53706
| | - Bret A Payseur
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin 53706
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Pergams ORW, Byrn D, Lee KLY, Jackson R. Rapid morphological change in black rats (Rattus rattus) after an island introduction. PeerJ 2015; 3:e812. [PMID: 25780765 PMCID: PMC4358651 DOI: 10.7717/peerj.812] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2014] [Accepted: 02/11/2015] [Indexed: 11/20/2022] Open
Abstract
Rapid morphological change has been shown in rodent populations on islands, including endemic deer mice (Peromyscus maniculatus subspp.) on the California Channel Islands. Surprisingly, most of these changes were towards a smaller size. Black rats were introduced to Anacapa Island in the mid-1800s (probably in 1853) and eradicated in 2001-2002. To assess possible changes in these rats since their introduction, eleven cranial and four standard external measurements were taken from 59 Rattus rattus specimens collected from 1940-2000. All rat cranial traits changed 3.06-10.43% (724-2567 d, 0.06-0.42 h), and all became larger. When considered in haldanes, these changes are among the fastest on record in any organism, and far exceed changes found in other island rodents. These changes were confirmed by MANOVA (Wilk's λ < 0.0005, F d.f.15 = 2974.386, P < 0.0005), and all 11 cranial traits significantly fit linear regressions. We speculate that concurrent changes in mice may have been due in part to competition with and/or predation by rats. Future research might evaluate whether the vector of mouse evolution on Anacapa is again changing after rat eradication.
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Affiliation(s)
- Oliver R W Pergams
- Department of Biology, Olive-Harvey College, One of the City Colleges of Chicago , Chicago, IL , USA ; Department of Biological Sciences, University of Illinois at Chicago , Chicago, IL , USA
| | - David Byrn
- Department of Biology, Olive-Harvey College, One of the City Colleges of Chicago , Chicago, IL , USA
| | - Kashawneda L Y Lee
- Department of Biology, Olive-Harvey College, One of the City Colleges of Chicago , Chicago, IL , USA
| | - Racheal Jackson
- Department of Biology, Olive-Harvey College, One of the City Colleges of Chicago , Chicago, IL , USA
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Lister AM, Hall C. Variation in Body and Tooth Size with Island Area in Small Mammals: A Study of Scottish and Faroese House Mice (Mus musculus). ANN ZOOL FENN 2014. [DOI: 10.5735/086.051.0211] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Intraspecific epigenetic polymorphism of the East European vole (Microtus levis Miller, 1908) in South-eastern Europe and Turkey. Biologia (Bratisl) 2013. [DOI: 10.2478/s11756-013-0288-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Chan Y, Jones F, McConnell E, Bryk J, Bünger L, Tautz D. Parallel Selection Mapping Using Artificially Selected Mice Reveals Body Weight Control Loci. Curr Biol 2012; 22:794-800. [DOI: 10.1016/j.cub.2012.03.011] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2012] [Revised: 02/17/2012] [Accepted: 03/05/2012] [Indexed: 12/21/2022]
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Russell JC. Spatio-temporal patterns of introduced mice and invertebrates on Antipodes Island. Polar Biol 2012. [DOI: 10.1007/s00300-012-1165-8] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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JONES ELEANORP, JENSEN JENSKJELD, MAGNUSSEN EYĐFINN, GREGERSEN NOOMI, HANSEN HEIDIS, SEARLE JEREMYB. A molecular characterization of the charismatic Faroe house mouse. Biol J Linn Soc Lond 2011. [DOI: 10.1111/j.1095-8312.2010.01597.x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Wiig ØY, Lie RW. An analysis of the morphological relationships between the Hooded seals (Cystophora cristata) of Newfoundland, the Denmark Strait, and Jan Mayen. J Zool (1987) 2009. [DOI: 10.1111/j.1469-7998.1984.tb02329.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- ØYstein Wiig
- Department of Systematic Zoology, Zoological Museum, University of Bergen, N‐5000 Bergen, Norway
| | - Rolf W. Lie
- Department of Systematic Zoology, Zoological Museum, University of Bergen, N‐5000 Bergen, Norway
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Berry RJ, Bonner WN, Peters J. Natural selection in House mice (Mus musculus) from South Georgia (South Atlantic Ocean). J Zool (1987) 2009. [DOI: 10.1111/j.1469-7998.1979.tb03970.x] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Genetics and origin of a Drosophila melanogaster population recently introduced to the Seychelles. Genet Res (Camb) 2009. [DOI: 10.1017/s0016672300019169] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
SUMMARYDuring an extensive survey of drosophilid fauna in 1977, D. melanogaster was not collected in the Seychelles. However, a population was found in 1981 in Victoria city, suggesting a recent introduction of this species. With respect to allozyme frequencies or ethanol tolerance, this population is almost identical to European ones and very different from those living under a similar equatorial climate on the African continent. The frequencies of rare biochemical alleles perhaps suggested that this population was founded by a small number of flies, less than ten inseminated females. For various biometrical traits, the situation was not so clear: according to the trait considered, Seychellian flies are either intermediate between European and African populations or closer to the latter. These data suggest that a few flies, recently introduced from a temperate (European?) country, built up a big population which is now on the way to adapting itself to new tropical conditions. Such an involuntary experiment should afford a unique opportunity to distinguish the respective roles of drift and adaptation in the evolution of D. melanogaster geographic races.
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Berry RJ. Genetics of insular populations of mammals, with particular reference to differentiation and founder effects in British small mammals. Biol J Linn Soc Lond 2008. [DOI: 10.1111/j.1095-8312.1986.tb01754.x] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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ENCKELL PEHRH, BENGTSON SVENAXEL, DOUWES PER, NIKLASSON MONICA, STILLE BO, WIMAN BO. The dispersal pattern of an anthropochorous species: Genetic variation in populations of Lumbricus terrestris L. (Lumbricidae) in the Faroe Islands. Hereditas 2008. [DOI: 10.1111/j.1601-5223.1986.tb00539.x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
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NAVARRO MARIANAVAJASY, BRITTON-DAVIDIAN JANICE. Genetic structure of insular Mediterranean populations of the house mouse. Biol J Linn Soc Lond 2008. [DOI: 10.1111/j.1095-8312.1989.tb00502.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Berry RJ. Where biology meets; or how science advances: Presidential Address to the Linnean Society delivered at the Anniversary Meeting, 24th May 1985. Biol J Linn Soc Lond 2008. [DOI: 10.1111/j.1095-8312.1987.tb00300.x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Epigenetic variation of the common shrew, Sorex araneus, in different habitats. RUSSIAN JOURNAL OF THERIOLOGY 2007. [DOI: 10.15298/rusjtheriol.06.1.08] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Takada Y, Sakai E, Uematsu Y, Tateishi T. Morphological variation of large Japanese field mice, Apodemus speciosus on the Izu and Oki Islands. MAMMAL STUDY 2006. [DOI: 10.3106/1348-6160(2006)31[29:mvoljf]2.0.co;2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Miller RA, Dysko R, Chrisp C, Seguin R, Linsalata L, Buehner G, Harper JM, Austad S. Mouse ( Mus musculus) stocks derived from tropical islands: new models for genetic analysis of life-history traits. J Zool (1987) 2006; 250:95-104. [PMID: 32336890 PMCID: PMC7166381 DOI: 10.1111/j.1469-7998.2000.tb00580.x] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/16/1999] [Indexed: 12/01/2022]
Abstract
Founder effects, together with access to unoccupied ecological niches, may allow rodent populations on isolated islands to evolve constellations of life‐history traits that distinguish them from their mainland relatives, for example in body size, litter size, and longevity. In particular, low intrinsic mortality risks on islands with reduced predator numbers and not subject to harsh winter climates may in principle support the development of stocks with extended longevity. Conversely, the conditions under which laboratory rodents are typically bred are thought to select for genotypes that produce large, rapidly maturing races with high early reproductive rates but diminished longevity. To test these ideas, and to generate new mouse stocks suitable for genetic and molecular analysis of the processes that time life‐history events, we have developed specific pathogen‐free stocks from mice trapped from three distinct populations: the U.S. mainland (Idaho) and the tropical Pacific islands Majuro and Pohnpei. Mice from all three locations were found to be shorter and lighter, to have smaller litters, and to have higher faecal corticosterone levels than mice of a genetically heterogeneous stock derived from four common laboratory inbred strains. Among the wild‐derived stocks, mice from Pohnpei and Majuro were significantly lighter and shorter than Idaho‐derived animals, even in populations kept from birth under identical housing conditions. Litter size and reproductive success rates did not differ significantly among the three wild‐derived stocks. Although further work will be needed to see if, as predicted, the wild‐derived stocks differ from one another and from laboratory mice in longevity, these stocks provide useful tools for genetic dissection of factors that regulate body size and reproductive success.
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Affiliation(s)
- Richard A Miller
- CCGCB, University of Michigan, 1500 East Medical Center Drive, Ann Arbor, MI 48109-0940, U.S.A
| | - Robert Dysko
- CCGCB, University of Michigan, 1500 East Medical Center Drive, Ann Arbor, MI 48109-0940, U.S.A
| | - Clarence Chrisp
- CCGCB, University of Michigan, 1500 East Medical Center Drive, Ann Arbor, MI 48109-0940, U.S.A
| | - Renee Seguin
- CCGCB, University of Michigan, 1500 East Medical Center Drive, Ann Arbor, MI 48109-0940, U.S.A
| | - Luann Linsalata
- CCGCB, University of Michigan, 1500 East Medical Center Drive, Ann Arbor, MI 48109-0940, U.S.A
| | - Gretchen Buehner
- CCGCB, University of Michigan, 1500 East Medical Center Drive, Ann Arbor, MI 48109-0940, U.S.A
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MUÑOZ-MUÑOZ FRANCESC, ASSUMPCIÓ SANS-FUENTES MARIA, LÓPEZ-FUSTER MARÍAJOSÉ, VENTURA JACINT. Non-metric morphological divergence in the western house mouse, Mus musculus domesticus, from the Barcelona chromosomal hybrid zone. Biol J Linn Soc Lond 2003. [DOI: 10.1046/j.1095-8312.2003.00240.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Abstract
An important question about traditional caloric restriction (CR) experiments on laboratory mice is how food intake in the laboratory compares with that of wild mice in nature. Such knowledge would allow us to distinguish between two opposing views of the anti-aging effect of CR--whether CR represents, in laboratory animals, a return to a more normal level of food intake, compared with excess food consumption typical of laboratory conditions or whether CR represents restriction below that of animals living in nature, i.e. the conditions under which house mice evolved. To address this issue, we compared energy use of three mouse genotypes: (1) laboratory-selected mouse strains (= laboratory mice), (2) house mice that were four generations or fewer removed from the wild (= wild-derived mice) and (3) mice living in nature (= wild mice). We found, after correcting for body mass, that ad libitum fed laboratory mice eat no more than wild mice. In fact, under demanding natural conditions, wild mice eat even more than ad libitum fed laboratory mice. Laboratory mice do, however, eat more than wild-derived mice housed in similar captive conditions. Therefore, laboratory mice have been selected during the course of domestication for increased food intake compared with captive wild mice, but they are not particularly gluttonous compared with wild mice in nature. We conclude that CR experiments do in fact restrict energy consumption beyond that typically experienced by mice in nature. Therefore, the retarded aging observed with CR is not due to eliminating the detrimental effects of overeating.
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Affiliation(s)
- Steven N Austad
- University of Idaho, Department of Biological Sciences, Moscow, ID 83844-3051, USA.
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Austad SN. Does caloric restriction in the laboratory simply prevent overfeeding and return house mice to their natural level of food intake? ACTA ACUST UNITED AC 2001; 2001:pe3. [PMID: 14602968 DOI: 10.1126/sageke.2001.6.pe3] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
Some researchers have speculated that the senescence-retarding effect of caloric restriction on laboratory rodents is an artifact of overfeeding under captive conditions. The argument posits that mice in nature are chronically calorically restricted; therefore, the typical laboratory protocol of restricting animals to 60% of their ad lib food intake more realistically replicates life in the field: the conditions under which the animals' physiology has been designed by natural selection to thrive. The hypothesis concludes that instead of comparing control animals with restricted animals, we are in fact comparing overfed animals with adequately fed ones, and, not surprisingly, the overfed ones die younger. In this Perspective, the author discusses the merits and drawbacks of this hypothesis in light of energy consumption data for various types of mice.
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Affiliation(s)
- S N Austad
- Department of Biological Sciences, University of Idaho, Moscow, ID 83844-3051, USA.
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40
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Takada Y, Sakai E, Uematsu Y, Tateishi T. Morphometric variation of house mice ( Mus musculus) on the Izu Islands. MAMMAL STUDY 1999. [DOI: 10.3106/mammalstudy.24.51] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Affiliation(s)
- Yasushi Takada
- Department of Anatomy, School of Dentistry, Aichi-Gakuin University
| | - Eiichi Sakai
- Department of Anatomy, School of Dentistry, Aichi-Gakuin University
| | - Yasushi Uematsu
- Department of Anatomy, School of Dentistry, Aichi-Gakuin University
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Abstract
The artificial creation of genetically long-lived populations of several invertebrate species has illustrated how researchers may take advantage of genetic variation within a species to investigate the nature and mechanisms of aging. The advantage of studying intraspecific variation is that populations will be generally similar except for the relevant demographic differences. Also, there are reasons to suspect that genetic mechanisms of aging may differ from mechanisms associated with life extension via environmental manipulations such as caloric restriction. However creating a long-lived mammalian aging model will be expensive and time consuming. An alternative approach is to seek to identify naturally occurring slowly aging populations to contrast mechanistically with a reference population. Ecologists have already noted that demographic alterations of the appropriate type are frequently associated with populations from differing latitudes, differing altitudes, or from islands. Therefore, it is likely that genetically longer- (and shorter)-lived mammal populations of the same species already exist in nature, and could potentially be exploited to inquire into the genetics and mechanisms of aging and longevity. Of particular interest is the indication that some island populations of house mice may exhibit extended longevity compared with laboratory strains.
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Affiliation(s)
- S N Austad
- Department of Biological Sciences, University of Idaho, Moscow 83843, USA
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Abstract
The reason for the distinctiveness of small mammals on islands has traditionally attracted some imaginative story-telling, usually invoking isolation (as a relict) followed by adaptation and/or random genetic changes. Studies of voles on Orkney, long-tailed field mice on the Hebrides and Shetland, and house mice on the Faroe archipelago show that the main factor in differentiating island races from their mainland ancestors is the chance genetic composition of the founding animals. Subsequent change has necessarily to be based on the genes and frequencies carried by this colonizing group. Probably most post-colonization change is adaptive, although possibly limited in extent both by the initial paucity of variation and by the conservative effect of intragenomic interactions. It is probably helpful to recognize that the 'founder effect' or principle commonly invoked in discussions about evolution on islands involves a founder 'event', followed by founder 'selection'. Island differentiation is not necessarily a precursor to speciation, although the wide occurrence of island endemics suggests that founder effects should not be rejected as a driving force initiating speciation. Notwithstanding, island forms provide a valuable 'laboratory' for testing new genetic combinations, a small proportion of which may prove evolutionarily exciting. Only more empirical studies will uncover their evolutionary importance.
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Affiliation(s)
- R J Berry
- Department of Biology, University College London, U.K
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43
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Sjöberg G. Genetic characteristics of introduced birds and mammals. WILDLIFE BIOLOGY 1996. [DOI: 10.2981/wlb.1996.014] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- Göran Sjöberg
- Göran Sjöberg, Department of Animal Ecology, Swedish University of Agricultural Sciences, S-901 83 Umeå, Sweden
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Abstract
The house mouse, Mus domesticus, can thrive in natural environments much below its optimum temperature. Thermogenesis is then above that at more usual temperatures. In addition, body weight, and the weights of brown adipose tissue and the kidneys, may be higher than usual. In free populations of house mice cold lowers fertility and may prevent breeding. Other possible limiting factors on breeding are food supply, shelter for nesting and social interactions. In captivity, wild-type house mice exposed to severe cold (around 0 degrees C) at first adapt ontogenetically by shivering and reduced activity. But raised thermogenesis is soon achieved without shivering; nest-building improves; and readiness to explore may be enhanced. Endocrine changes probably include, at least initially, a rise in adrenal cortical activity and in catecholamine secretion. Some females become barren, but many remain fertile. The maturity of fertile females is, however, delayed and intervals between births are lengthened; nestling mortality rises. A limiting factor during lactation may be the capacity of the gut. Similar adaptive changes are observed during winter in some species of small mammals that do not hibernate. But neither the house mouse nor other species present a single, universal pattern of cold-adaptation. Wild-type mice bred for about 10 generations in a warm laboratory environment (20-23 degrees C) change little over generations. In cold they become progressively heavier and fatter at all ages; they mature earlier, and nestling mortality declines. The milk of such 'Eskimo' females is more concentrated than that of controls. If 'Eskimo' mice are returned to a warm environment, they are more fertile, and rear heavier young, than controls that remained in the warm. Despite the heavier young, litter size is not reduced: it may be increased, probably as a result of a higher ovulation rate. Parental effects have been analyzed by cross-fostering and hybridizing. Survival, growth and fertility are all favourably influenced by the intra-uterine and nest environments provided by 'Eskimo' females. 'Eskimo' males are also better fathers. Hence after ten generations the phenotype of cold-adapted house mice shows the combined effects of (a) an ontogenetic response to cold, (b) a superior parental environment and (c) a change genotype. The secular changes in the cold that lead to this phenotype give the appearance of evolution in miniature; but it is equally possible that they represent a genetical versatility that allows rapid, reversible shifts in response to environmental demands.(ABSTRACT TRUNCATED AT 400 WORDS)
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Berry RJ. Genetical processes in wild mouse populations. Past myth and present knowledge. Curr Top Microbiol Immunol 1986; 127:86-94. [PMID: 3731858 DOI: 10.1007/978-3-642-71304-0_10] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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Richtsmeier JT, McGrath JW. Quantitative genetics of cranial nonmetric traits in randombred mice: heritability and etiology. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 1986; 69:51-8. [PMID: 3946596 DOI: 10.1002/ajpa.1330690107] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Cheverud and Buikstra (1981) demonstrated a tendency for nonmetric traits representing the number of foramina to have lower heritabilities than those representing hyperstotic or hypostotic traits in a sample of rhesus macaques. Based on this observation, Cheverud and Buikstra hypothesize that differences in the heritability of the two sets of traits may be due to differences in trait etiology. This study addresses the proposed relationship between trait heritability and etiology. Heritability values are calculated for 35 cranial nonmetric traits in a sample of 320 randombred mice using analysis of variance. The results are minimally consistent with the etiological hypothesis, but only 4 of the 35 traits showed statistically significant heritability values. These results are discussed with reference to the assumption that nonmetric traits have a strong genetic component. It is concluded that the developmental pathways that genetic variation traverses before being expressed in the form of nonmetric traits must be understood before variation in nonmetric traits can be used to its fullest potential.
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Lovell DP, Johnson FM. Quantitative genetic variation in the skeleton of the mouse. I. Variation between inbred strains. Genet Res (Camb) 1983; 42:169-82. [PMID: 6667851 DOI: 10.1017/s0016672300021637] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
SUMMARYA series of six bones from samples of mice from eleven inbred strains and one F1hybrid were measured using a simple apparatus. The bones examined were the mandible, os coxae, femur, tibia–fibula, scapula and humerus. Considerable variation in the shape of each bone was found and successful discrimination between the strains was obtained. Correct strain classification ranged from 87% for the scapula to 98% for the os coxae. Gross abnormalities and quantitative variants were identified.As the pattern of discrimination is different for each bone, the use of other bones in addition to the mandible may improve resolution in the identification and quality control of mouse stocks. The objective and precise identification of abnormal and variant bones suggests that the method may be useful for population studies and for the detection of induced skeletal abnormalities in toxicological investigations.
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Thorpe RS, Corti M, Capanna E. Morphometric divergence of Robertsonian populations/species ofMus: A multivariate analysis of size and shape. ACTA ACUST UNITED AC 1982. [DOI: 10.1007/bf01953654] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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