Soil Effects on Forest Structure and Diversity in a Moist and a Dry Tropical Forest

Decoding seasonal changes: soil parameters and microbial communities in tropical dry deciduous forests

In dry deciduous tropical forests, both seasons (winter and summer) offer habitats that are essential ecologically. How these seasonal changes affect soil properties and microbial communities is not yet fully understood. This study aimed to investigate the influence of seasonal fluctuations on soil characteristics and microbial populations. The soil moisture content dramatically increases in the summer. However, the soil pH only gradually shifts from acidic to slightly neutral. During the summer, electrical conductivity (EC) values range from 0.62 to 1.03 ds m-1, in contrast to their decline in the winter. The levels of soil macronutrients and micronutrients increase during the summer, as does the quantity of soil organic carbon (SOC). A two-way ANOVA analysis reveals limited impacts of seasonal fluctuations and specific geographic locations on the amounts of accessible nitrogen (N) and phosphorus (P). Moreover, dehydrogenase, nitrate reductase, and urease activities rise in the summer, while chitinase, protease, and acid phosphatase activities are more pronounced in the winter. The soil microbes were identified in both seasons through 16S rRNA and ITS (Internal Transcribed Spacer) gene sequencing. Results revealed Proteobacteria and Ascomycota as predominant bacterial and fungal phyla. However, Bacillus, Pseudomonas, and Burkholderia are dominant bacterial genera, and Aspergillus, Alternaria, and Trichoderma are dominant fungal genera in the forest soil samples. Dominant bacterial and fungal genera may play a role in essential ecosystem services such as soil health management and nutrient cycling. In both seasons, clear relationships exist between soil properties, including pH, moisture, iron (Fe), zinc (Zn), and microbial diversity. Enzymatic activities and microbial shift relate positively with soil parameters. This study highlights robust soil-microbial interactions that persist mainly in the top layers of tropical dry deciduous forests in the summer and winter seasons. It provides insights into the responses of soil-microbial communities to seasonal changes, advancing our understanding of ecosystem dynamics and biodiversity preservation.

Potential short-term effects of earthquake on the plant-soil interface in alpine grassland of the Qinghai-Tibetan Plateau

Earthquakes are environmental disturbances affecting ecosystem functioning, health, and biodiversity, but their potential impacts on plant-soil interface are still poorly understood. In this study, grassland habitats in areas near and away from the seismo-fault in Madou, a region typical of alpine conditions on the Qinghai-Tibetan Plateau, were randomly selected. The impacts of earthquake on soil properties and plant nutrient content in the short term were emphasized, and their potential relationships with community diversity and productivity were examined. According to the findings of the study, the Maduo earthquake led to a decrease in soil nutrient content in alpine grassland ecosystems, especially soil TC, TN, TP, TCa, AP, AK, NH4 +-N, and SOC, and inhibited the absorption of N, Ca, and Mg nutrients by plants. In addition, the diversity and productivity of communities were affected by both direct and indirect earthquake pathways. The negative impacts of seismic fracture on soil structure had the most significant direct impact on plant community diversity. Earthquakes also indirectly reduced community productivity by reducing the soil N content and inhibiting the absorption of plant nutrients. Our findings suggested that earthquakes could potentially decrease the stability of the alpine grassland ecosystem on the QTP by affecting nutrient availability at the plant-soil interface.

Soil-vegetation relationship in savanic formations of the Jalapão, Brazil

Understanding the influence of fine-scale abiotic filters on plant communities can provide important insights into floristic patterns of the Brazilian Cerrado. We aimed to evaluate the interactions of the soil and the plant community composition with their distribution in different sandy environments of Brazilian Cerrado, the Jalapão region. Eight environments were sampled, each with ten plots of 20 × 50 m. All woody individuals presenting circumference at soil height ≥ 10 cm were sampled. Subplots of 5 × 15 m were demarcated, where woody individuals with a circumference at soil height ≥ 5 and < 10 cm were sampled. Subplots of 2 × 2 m were also demarcated to sample herbaceous individuals. Soil samples varying from 0 to 20 cm of depth were collected for each plot (20 × 50 m). Overall, 20000 individuals that belong to 338 species and 76 families were sampled. The dominant family was Fabaceae. There were significant differences among the environments regarding species richness and soil. The analyzed soils are extremely poor and with a tendency to sandy texture, small chemical and/or physical variations imply differences in the distribution of vegetation. Our study revealed abiotic filters exerted crucial fine-scale effects on plant community in the Jalapão region.

Carbon stock and uptake in the high-elevation tropical montane forests of the threatened Atlantic Forest hotspot: Ecosystem function and effects of elevation variation

Tropical montane forests (TMF) of the threatened Atlantic Forest hotspot play an important role in providing essential ecosystem services associated with hydrological regime and biodiversity conservation. However, important ecological patterns such as those related to the woody carbon biogeochemical cycle are not yet known for these forests, especially those located at high elevations (> 1500 m. a.s.l.). Herein, we used a dataset of 60 plots (2.4 ha) of old-growth TMF sampled along a high-elevation gradient (1500-2100 m a.s.l.) and monitored in two inventories (2011 and 2016) to better understand the patterns of carbon stock and uptake of these high-elevation forests and the related environmental (soil) and elevation controls. We found differences in the carbon stock along different elevation levels (120.36-170.4C.ton.ha^-1) and a carbon accumulation trend over the period along the entire gradient. Thus, forest carbon gain (3.82-5.14 ton.ha.year^-1) was greater than the carbon loss (2.1-3.4 ton.ha.year^-1) and resulted in a positive productivity net. In other words, the TMF acted as a carbon sink, removing carbon from the atmosphere and storing it in woody tissues. Soil variables also exert significant influences on carbon stock and uptake (significative effects of phosphorus on carbon stock and of cation exchange capacity on carbon loss), driving such patterns in isolation or in interaction with elevation. Considering the high conservation degree of the TMF monitored, our results may be indicative of a similar trend in other similar forests, but which have gone through disturbances in the more recent past. These TMF fragments have a wide occurrence in the Atlantic Forest hotspot and may also be acting or will soon act as carbon sinks in improved conservation scenarios. Thus, these forests can play an essential role in conserving ecosystem services in the region and in mitigating climate changes.

Vegetation assessments under the influence of environmental variables from the Yakhtangay Hill of the Hindu-Himalayan range, North Western Pakistan

Vegetation structures and dynamics are the result of interactions between abiotic and biotic factors in an ecosystem. The present study was designed to investigate vegetation structure and species diversity along various environmental variables in the Yakhtangay Hills of the Hindu-Himalayan Mountain Pakistan, by using multivariate statistical analysis. Quadrat quantitative method was used for the sampling of vegetation. PC-ORD version 5 software was used to classify the vegetation into different plants communities using cluster analysis. The results of regression analysis among various edaphic variables shows that soil organic matter, total dissolved solids, electrical conductivity, CaCO₃ and moisture contents shows a significant positive correlation with species abundance, while the soil pH has inverse relationship with plant species abundance. Similarly, species richness increases with increase in soil organic matter, CaCO₃ and moisture contents, while decrease with increase in soil pH, total dissolved solids and electrical conductivity (p < 0.05). The vegetation was classified into four major plant communities and their respective indicators were identified using indicator species analysis. Indicator species analysis reflects the indicators of the study area are mostly the indicators to the Himalayan or moist temperate ecosystem. These indicators could be considered for micro-habitat conservation and respective ecosystem management plans not only in the study area but also in other region with similar sort of environmental conditions.

Influence of urbanisation on phytodiversity and some soil properties in riverine wetlands of Bamenda municipality, Cameroon

In urban areas, human activities result in the discharge of a variety of chemical substances into the environment. This affects soil quality, plant species diversity and human security. To suggest appropriate management strategies that ensure soil quality and human security amid urbanization, this study assessed the relationship between macrophyte diversity and some soil characteristics of wetlands that are adjacent to urban, peri-urban and rural areas in Bamenda Municipality, Cameroon. Plant communities were sampled for species composition and relative abundance, using the Braun-banquet method. Species richness was evaluated using Simpson's diversity index. Twenty-one soil samples (0-25 cm depth) were randomly collected within the wetlands and analyzed for their physicochemical characteristics using standard methods. The hierarchical cluster analysis (HCA) was used to group the wetlands under managing units. The dominant species ranked in order of abundance in the rural wetland were Raphia farinifera > Ludwigia hexandra > Coix spp. > Leersia hexandra > Ehchinochloa paramidelis. The Peri-urban wetland dominant species stood at Commelina bengalensis > Leersia hexandra > Cyperus distance > Ehchinochloa pyramidalis. In the Urban segment, Pennisetum purpureum > Echinochloa pyramidalis > Tithonia diversifolia > Leersia hexandra were the abundant species. The Simpson index of diversity was 0.94 for the urban and 0.96 for the peri-urban and rural sites respectively. The soils were slightly acidic with pH KCl ranging from 4.87 to 5.41. From the coefficient of variability classes, Sand, pH-H₂O, pH-KCl, and Na consistently varied slightly across the three sites. Two significant clusters (management units) representing a combination of urban, and peri-urban/rural were formed from the hierarchical dendrograms. The Mann-Whitney U test revealed a significant (P < 0.05) lower exchange acidity in the rural than the urban sites indicating contamination of the urban site, reducing its macrophyte diversity. Intensification and extension of urbanisation are gradually reducing the macrophyte diversity and also contaminating the soils of the wetlands of the Bamenda municipality in Cameroon, warranting monitoring. The chemical composition of soils in the urban cluster needs early remediation by encouraging the planting and monitoring of certain plants that can already take up the elements.

Development of bamboo- (Bambusa bambos) based bio-fence to protect field crops: Insights from a study in India's Bundelkhand region

Stray/wild animals can cause serious damages to crops, leading to accusations and counter accusations among villagers. In the Bundelkhand region of India, this problem is more severe due to “Anna Pratha,” that is, letting loose animals to open graze. Protective measures employed by farmers (barbed wire fencing, conventional fencing, etc.) are not fully effective and also require periodical maintenance, which involves additional costs and manpower. This necessitates the evolution of a cost-effective and long-term solution to minimize the problem. The current study seeks to evaluate the potential of thorny bamboo (Bambusa bambos) as a bio-fence creating deterrence to stray/wild animals at the ICAR—IISWC RC, the research farm of Datia, Madhya Pradesh, India. After 21 months of planting, bamboo plants attained the maximum plant height up to 4.47 m with the highest clump spread diameter of 30.50 cm. However, the growth of the bamboo bio-fence to be effective depends on the edaphic and management conditions. The findings revealed that planting bamboo at a distance of 80.00 cm in the continuous trench can be an effective bio-fence to avoid man–animal conflict. Huge crop losses were reported before the establishment of a bio-fence. In 2021–2022 (when bamboo plants turned into a closely spaced thicket, making a bio-fence), only two incidents of the invasion of animals were reported with no crop damage. The initial cost to develop a bamboo bio-fence was estimated at INR 5,796 for a length of 100 m. Therefore, the present study suggests that bamboo bio-fencing is an economical and effective crop protection measure against damage by wild/stray animals.

Multiple drivers influence tree species diversity and above-ground carbon stock in second-growth Atlantic forests: Implications for passive restoration

Second-growth forests (SGF) are critical components for limiting biodiversity loss and climate change mitigation. However, these forests were established after anthropic disturbances such as land use for planting, and in highly human-modified landscapes. These interventions can decrease the ability of biological communities to recover naturally, and it is necessary to understand how multiple drivers, from local scale to landscape scale influence the diversity and carbon stock of these forests in natural regeneration. For this, we used data from 37 SGF growing on areas previously used for eucalyptus plantations in the Brazilian Atlantic Forest, after the last cut cycle. For each SGF, the forest tree species diversity was calculated based on the Hills number, and we also calculated the above-ground carbon stock. Then, we evaluated the influence of multiple environmental factors on these indexes: soil properties, past-management intensity, patch configuration, and landscape composition. Little influence of soil properties was found, only soil fertility negatively influenced above-ground carbon stock. However, past-management intensity negatively influenced tree species diversity and carbon stock. The isolation of other forests and tree species propagules source distance (>500 ha) also negatively influenced the diversity of species. This is probably due to the favoring of tree pioneer species in highly human-modified landscapes because they are more tolerant of environmental changes, less dependent on animal dispersal, and have low carbon stock capacity. Thus, areas with higher past-management intensity and more isolated areas are less effective for passive restoration and may require intervention to recover tree diversity and carbon stock in the Atlantic Forest. The approach, which had not yet been applied in the Atlantic Forest, brought similar results to that found in other forests, and serves as a theoretical basis for choosing priority areas for passive restoration in the biome.

Interpolated Stand Properties of Urban Forest Parks Account for Posted Facial Expressions of Visitors

Posted facial expressions on social networks have been used as a gauge to assess the emotional perceptions of urban forest visitors. This approach may be limited by the randomness of visitor numbers and park locations, which may not be accounted for by the range of data in local tree inventories. Spatial interpolation can be used to predict stand characteristics and detect their relationship with posted facial expressions. Shaoguan was used as the study area where a tree inventory was used to extract data from 74 forest stands (each sized 30 m × 20 m), in which the range was increased by interpolating the stand characteristics of another 12 urban forest parks. Visitors smiled more in parks in regions with a high population or a large built-up area, where trees had strong trunks and dense canopies. People who displayed sad faces were more likely to visit parks located in regions of hilly mountains or farmlands, where soils had a greater total nitrogen concentration and organic matter. Our study illustrates a successful case in using data from a local tree inventory to predict stand characteristics of forest parks that attracted frequent visits.

Tree Species and Epiphyte Taxa Determine the "Metabolomic niche" of Canopy Suspended Soils in a Species-Rich Lowland Tropical Rainforest

Tropical forests are biodiversity hotspots, but it is not well understood how this diversity is structured and maintained. One hypothesis rests on the generation of a range of metabolic niches, with varied composition, supporting a high species diversity. Characterizing soil metabolomes can reveal fine-scale differences in composition and potentially help explain variation across these habitats. In particular, little is known about canopy soils, which are unique habitats that are likely to be sources of additional biodiversity and biogeochemical cycling in tropical forests. We studied the effects of diverse tree species and epiphytes on soil metabolomic profiles of forest floor and canopy suspended soils in a French Guianese rainforest. We found that the metabolomic profiles of canopy suspended soils were distinct from those of forest floor soils, differing between epiphyte-associated and non-epiphyte suspended soils, and the metabolomic profiles of suspended soils varied with host tree species, regardless of association with epiphyte. Thus, tree species is a key driver of rainforest suspended soil metabolomics. We found greater abundance of metabolites in suspended soils, particularly in groups associated with plants, such as phenolic compounds, and with metabolic pathways related to amino acids, nucleotides, and energy metabolism, due to the greater relative proportion of tree and epiphyte organic material derived from litter and root exudates, indicating a strong legacy of parent biological material. Our study provides evidence for the role of tree and epiphyte species in canopy soil metabolomic composition and in maintaining the high levels of soil metabolome diversity in this tropical rainforest. It is likely that a wide array of canopy microsite-level environmental conditions, which reflect interactions between trees and epiphytes, increase the microscale diversity in suspended soil metabolomes.

Disentangling Environmental Effects on the Tree Species Abundance Distribution and Richness in a Subtropical Forest

As a transitional vegetation type between evergreen broadleaved forest and deciduous broadleaved forest, evergreen-deciduous broadleaved mixed forest is composed of diverse plant species. This distinctive forest is generally distributed in mountainous areas with complex landforms and heterogeneous microenvironments. However, little is known about the roles of environmental conditions in driving the species diversity patterns of this forest. Here, based on a 15-ha plot in central China, we aimed to understand how and to what extent topographical characteristics and soil nutrients regulate the number and relative abundance of tree species in this forest. We measured environmental factors (terrain convexity, slope, soil total nitrogen, and phosphorus concentrations) and species diversity (species abundance distribution and species richness) in 20 m × 20 m subplots. Species abundance distribution was characterized by skewness, Berger-Parker index, and the proportion of singletons. The generalized additive model was used to examine the variations in diversity patterns caused by environmental factors. The structural equation model was used to assess whether and how topographical characteristics regulate species diversity via soil nutrients. We found that soil nutrients had significant negative effects on species richness and positive effects on all metrics of species abundance distribution. Convexity had significant positive effects on species richness and negative effects on all metrics of species abundance distribution, but these effects were mostly mediated by soil nutrients. Slope had significant negative effects on skewness and the Berger-Parker index, and these effects were almost independent of soil nutrients. Soil nutrients and topographical characteristics together accounted for 9.5-17.1% of variations in diversity patterns and, respectively, accounted for 8.9-13.9% and 3.3-10.7% of the variations. We concluded that soil nutrients were more important than topographical factors in regulating species diversity. Increased soil nutrient concentration led to decreased taxonomic diversity and increased species dominance and rarity. Convexity could be a better proxy for soil nutrients than slope. Moreover, these abiotic factors played limited roles in regulating diversity patterns, and it is possible that the observed patterns are also driven by some biotic and abiotic factors not considered here.

Spatial and environmental constraints on natural forest regeneration in the degraded landscape of Hong Kong

Tropical forests are the main reservoirs for global biodiversity and climate control. As secondary forests are now more widespread than primary forests, understanding their functioning and role in the biosphere is increasingly important. This includes understanding how they achieve stability, how they accumulate species and build biodiversity and how they cycle nutrients and carbon. This study investigates how we can restore tropical secondary forests to resemble high biomass, highly biodiverse and stable ecosystems seen today only in primary, undisturbed forests. The study used historic aerial photographs and recent high-resolution satellite images from 1945 to 2014 to map forest patches with five age categories, from 14-years to over 70-years, in Hong Kong's degraded tropical landscape. A forest inventory comprising 28 quadrats provided a rare opportunity to relate patterns of species composition at different stages during the succession with topographic and soil characteristics. The topographic variables accounted for 15% of the variance in species abundance, and age of forest stands explained 29%. Species richness rapidly increased after the first 15 years, but was lower in old-growth, than in medium age forest. This is attributed to the inability of late-successional species to disperse into the young forests as the natural dispersal agents (birds, mammals) have been lost. Light-loving pioneers which are unable to tolerate the shade of older forests, cannot regenerate in their own shade, therefore species diversity declines after a few decades. For ecosystem restoration in tropical secondary forests, introduction of late-successional species is necessary to assist natural succession, given the absence of native fauna, seed dispersal agents, and the surrounding altered environment. We also show that remote sensing can play a pivotal role in understanding the recovery and functioning of secondary forest regeneration as its contribution to the biosphere is increasingly important.

Litter and soil biogeochemical parameters as indicators of sustainable logging in Central Amazonia

One-fourth of Brazilian Amazonia is managed for timber production, but only a small portion of active logging sites follow sustainable forest management plans (SFMPs). Amazon forests without SFMPs are susceptible to deforestation because such plans integrate the use of forest products and conservation goals by allowing selective wood extraction following regulations aimed at reducing the long-term impact of logging. However, it remains uncertain whether reduced-impact selective logging typical of SFMPs (17-20 m³ ha^-1 yr^-1 of 38-70 species) changes forest regeneration, carbon (C) stocks, and nutrient cycling. Here, we tested the hypothesis that litter and soil biogeochemical parameters serve as indicators of sustainable logging as forest regeneration, C stocks, and C-to-nutrient ratios in soil and litter become progressively similar to those of primary forests as time elapses after logging. We used a chronosequence spanning nine years since logging to relate litter and soil (at 0-10, 10-30, 30-50 cm depth) C stocks and 12 and 15 biogeochemical parameters, respectively, as well as canopy cover and tree seedling density (10-150 cm tall) in upland evergreen Amazon forests. In one unlogged and four logged stands sampled three, five, seven, and nine years after logging, we compared 15 permanent plots (three replicated 0.5 ha plots per time-since-logging category). We found that five parameters explained >80% of the variation in soil and litter properties among logged and unlogged stands. Litter parameters were more sensitive to logging than soil parameters, as litter C stocks and C-to-nutrient ratios increased systematically after logging. Canopy cover decreased over time and was ~14% lower nine years after logging. Total seedling density did not change consistently over time but was ~54% higher seven years after logging. Our data suggest that the SFMP guidelines have served the purpose of maintaining soil quality and forest regeneration. Litter and soil parameters can be useful indicators of sustainable forest management in upland evergreen forests in Central Amazonia.

Tropical Dry Forest Diversity, Climatic Response, and Resilience in a Changing Climate

Central and South America tropical dry forest (TDF) is a water-limited biome with a high number of endemic species and numerous ecosystem services which has experienced a boom in research in the last decade. Although the number of case studies across these seasonal, water-limited, tropical forests has increased, there has not been a comprehensive review to assess the physiological variability of this biome across the continent and assess how these forests respond to climatic variables. Additionally, understanding forest change and resilience under climatic variability, currently and in the future, is essential for assessing the future extent and health of forests in the future. Therefore, the objective of this paper is to provide a literature review on the variability of TDF diversity and structure across a latitudinal gradient and to assess how these components respond to differences in climatic variables across this geographic area. We first assess the current state of understanding of the structure, biomass, phenological cycles, and successional stages across the latitudinal gradient. We subsequently review the response of these five areas to differences in precipitation, temperature, and extreme weather events, such as droughts and hurricanes. We find that there is a range of adaptability to precipitation, with many areas exhibiting drought tolerance except under the most extreme circumstances, while being susceptible to damage from increased extreme precipitation events. Finally, we use this climatic response to provide a commentary on the projected resilience of TDFs under climatic changes, finding a likelihood of resilience under drying scenarios, although model projections do not agree on the magnitude or direction of precipitation change. This review of quantitative studies will provide more concrete details on the current diversity that encompasses the TDF, the natural climatic ranges under which this ecosystem can survive and thrive, and can help inform future forest management practices under climate change scenarios.

Multiple abiotic and biotic pathways shape biomass demographic processes in temperate forests

Forests play a key role in regulating the global carbon cycle, and yet the abiotic and biotic conditions that drive the demographic processes that underpin forest carbon dynamics remain poorly understood in natural ecosystems. To address this knowledge gap, we used repeat forest inventory data from 92,285 trees across four large permanent plots (4–25 ha in size) in temperate mixed forests in northeast China to ask the following questions: (1) How do soil conditions and stand age drive biomass demographic processes? (2) How do vegetation quality (i.e., functional trait diversity and composition) and quantity (i.e., initial biomass stocks) influence biomass demographic processes independently from soil conditions and stand age? (3) What is the relative contribution of growth, recruitment, and mortality to net biomass change? Using structural equation modeling, we showed that all three demographic processes were jointly constrained by multiple abiotic and biotic factors and that mortality was the strongest determinant on net biomass change over time. Growth and mortality, as well as functional trait diversity and the community‐weighted mean of specific leaf area (CWM_SLA), declined with stand age. By contrast, high soil phosphorous concentrations were associated with greater functional diversity and faster dynamics (i.e., high growth and mortality rates), but associated with lower CWM_SLA and initial biomass stock. More functionally diverse communities also had higher recruitment rates, but did not exhibit faster growth and mortality. Instead, initial biomass stocks and CWM_SLA were stronger predictors of biomass growth and mortality, respectively. By integrating the full spectrum of abiotic and biotic drivers of forest biomass dynamics, our study provides critical system‐level insights needed to predict the possible consequences of regional changes in forest diversity, composition, structure and function in the context of global change.

Interactive effects of tree size, crown exposure and logging on drought-induced mortality

Large trees in the tropics are reportedly more vulnerable to droughts than their smaller neighbours. This pattern is of interest due to what it portends for forest structure, timber production, carbon sequestration and multiple other values given that intensified El Niño Southern Oscillation (ENSO) events are expected to increase the frequency and intensity of droughts in the Amazon region. What remains unclear is what characteristics of large trees render them especially vulnerable to drought-induced mortality and how this vulnerability changes with forest degradation. Using a large-scale, long-term silvicultural experiment in a transitional Amazonian forest in Bolivia, we disentangle the effects of stem diameter, tree height, crown exposure and logging-induced degradation on risks of drought-induced mortality during the 2004/2005 ENSO event. Overall, tree mortality increased in response to drought in both logged and unlogged plots. Tree height was a much stronger predictor of mortality than stem diameter. In unlogged plots, tree height but not crown exposure was positively associated with drought-induced mortality, whereas in logged plots, neither tree height nor crown exposure was associated with drought-induced mortality. Our results suggest that, at the scale of a site, hydraulic factors related to tree height, not air humidity, are a cause of elevated drought-induced mortality of large trees in unlogged plots.This article is part of a discussion meeting issue 'The impact of the 2015/2016 El Niño on the terrestrial tropical carbon cycle: patterns, mechanisms and implications'.

Commiphora leptophloeos Phytochemical and Antimicrobial Characterization

Commiphora leptophloeos is a plant specie usually known for its medicinal purposes in local communities in Northeast Brazil. In order to evaluate its therapeutic potential, we aimed to determine the phytochemical and antimicrobial properties of C. leptophloeos extracts. Thin Layer Chromatography (TLC) was able to detect the presence of phenolic compounds, flavonoids and reducing sugars. Three phenolic compounds were identified by HPLC and described as Gallic, Chlorogenic and Protocatechuic acids. On the other hand, H1NMR analysis revealed the presence of hinokinin, a bioactive lignan further characterized in the present work. The minimum inhibitory concentration (MIC) values for hinokinin ranged from 0.0485 to 3.125 mg/mL in different S. aureus clinical isolates and showed a bactericidal activity against MRSA isolated from blood (MMC 0.40 mg/mL) and postoperative secretion (MMC = 3.125 mg/mL). C. leptophloeos extracts also showed antimicrobial activity against Mycobacterium species such as M. smegmatis (MIC = 12.5 mg/mL) and M. tuberculosis (MIC = 52 mg/mL). Additionally, we determined the toxicity of C. leptophloeos by in vitro HC50 tests with hemolytic activity detected of 313 ± 0.5 μg/mL. Our results showed that C. leptophloeos possesses inhibitory properties against MRSA as well as several other clinically important microorganisms. Furthermore, the present work is the first report of the presence of hinokinin in Commiphora genus.

Tree Age Distributions Reveal Large-Scale Disturbance-Recovery Cycles in Three Tropical Forests

Over the past few decades there has been a growing realization that a large share of apparently 'virgin' or 'old-growth' tropical forests carries a legacy of past natural or anthropogenic disturbances that have a substantial effect on present-day forest composition, structure and dynamics. Yet, direct evidence of such disturbances is scarce and comparisons of disturbance dynamics across regions even more so. Here we present a tree-ring based reconstruction of disturbance histories from three tropical forest sites in Bolivia, Cameroon, and Thailand. We studied temporal patterns in tree regeneration of shade-intolerant tree species, because establishment of these trees is indicative for canopy disturbance. In three large areas (140-300 ha), stem disks and increment cores were collected for a total of 1154 trees (>5 cm diameter) from 12 tree species to estimate the age of every tree. Using these age estimates we produced population age distributions, which were analyzed for evidence of past disturbance. Our approach allowed us to reconstruct patterns of tree establishment over a period of around 250 years. In Bolivia, we found continuous regeneration rates of three species and a peaked age distribution of a long-lived pioneer species. In both Cameroon and Thailand we found irregular age distributions, indicating strongly reduced regeneration rates over a period of 10-60 years. Past fires, windthrow events or anthropogenic disturbances all provide plausible explanations for the reported variation in tree age across the three sites. Our results support the recent idea that the long-term dynamics of tropical forests are impacted by large-scale disturbance-recovery cycles, similar to those driving temperate forest dynamics.

Land-use intensification effects on functional properties in tropical plant communities

There is consensus that plant diversity and ecosystem processes are negatively affected by land-use intensification (LUI), but, at the same time, there is empirical evidence that a large heterogeneity can be found in the responses. This heterogeneity is especially poorly understood in tropical ecosystems. We evaluated changes in community functional properties across five common land-use types in the wet tropics with different land-use intensity: mature forest, logged forest, secondary forest, agricultural land, and pastureland, located in the lowlands of Bolivia. For the dominant plant species, we measured 12 functional response traits related to their life history, acquisition and conservation of resources, plant domestication, and breeding. We used three single-trait metrics to describe community functional properties: community abundance-weighted mean (CWM) traits values, coefficient of variation, and kurtosis of distribution. The CWM of all 12 traits clearly responded to LUI. Overall, we found that an increase in LUI resulted in communities dominated by plants with acquisitive leaf trait values. However, contrary to our expectations, secondary forests had more conservative trait values (i.e., lower specific leaf area) than mature and logged forest, probably because they were dominated by palm species. Functional variation peaked at intermediate land-use intensity (high coefficient of variation and low kurtosis), which included secondary forest but, unexpectedly, also agricultural land, which is an intensely managed system. The high functional variation of these systems is due to a combination of how response traits (and species) are filtered out by biophysical filters and how management practices introduced a range of exotic species and their trait values into the local species pool. Our results showed that, at local scales and depending on prevailing environmental and management practices, LUI does not necessarily result in communities with more acquisitive trait values or with less functional variation. Instead of the widely expected negative impacts of LUI on plant diversity, we found varying responses of functional variation, with possible repercussions on many ecosystem services. These findings provide a background for actively mitigating negative effects of LUI while meeting the needs of local communities that rely mainly on provisioning ecosystem services for their livelihoods.

(15)N in tree rings as a bio-indicator of changing nitrogen cycling in tropical forests: an evaluation at three sites using two sampling methods

Anthropogenic nitrogen deposition is currently causing a more than twofold increase of reactive nitrogen input over large areas in the tropics. Elevated (15)N abundance (δ(15)N) in the growth rings of some tropical trees has been hypothesized to reflect an increased leaching of (15)N-depleted nitrate from the soil, following anthropogenic nitrogen deposition over the last decades. To find further evidence for altered nitrogen cycling in tropical forests, we measured long-term δ(15)N values in trees from Bolivia, Cameroon, and Thailand. We used two different sampling methods. In the first, wood samples were taken in a conventional way: from the pith to the bark across the stem of 28 large trees (the "radial" method). In the second, δ(15)N values were compared across a fixed diameter (the "fixed-diameter" method). We sampled 400 trees that differed widely in size, but measured δ(15)N in the stem around the same diameter (20 cm dbh) in all trees. As a result, the growth rings formed around this diameter differed in age and allowed a comparison of δ(15)N values over time with an explicit control for potential size-effects on δ(15)N values. We found a significant increase of tree-ring δ(15)N across the stem radius of large trees from Bolivia and Cameroon, but no change in tree-ring δ(15)N values over time was found in any of the study sites when controlling for tree size. This suggests that radial trends of δ(15)N values within trees reflect tree ontogeny (size development). However, for the trees from Cameroon and Thailand, a low statistical power in the fixed-diameter method prevents to conclude this with high certainty. For the trees from Bolivia, statistical power in the fixed-diameter method was high, showing that the temporal trend in tree-ring δ(15)N values in the radial method is primarily caused by tree ontogeny and unlikely by a change in nitrogen cycling. We therefore stress to account for tree size before tree-ring δ(15)N values can be properly interpreted.

Carbon stock loss from deforestation through 2013 in Brazilian Amazonia

The largest carbon stock in tropical vegetation is in Brazilian Amazonia. In this ~5 million km(2) area, over 750,000 km(2) of forest and ~240,000 km(2) of nonforest vegetation types had been cleared through 2013. We estimate current carbon stocks and cumulative gross carbon loss from clearing of premodern vegetation in Brazil's 'Legal Amazonia' and 'Amazonia biome' regions. Biomass of 'premodern' vegetation (prior to major increases in disturbance beginning in the 1970s) was estimated by matching vegetation classes mapped at a scale of 1 : 250,000 and 29 biomass means from 41 published studies for vegetation types classified as forest (2317 1-ha plots) and as either nonforest or contact zones (1830 plots and subplots of varied size). Total biomass (above and below-ground, dry weight) underwent a gross reduction of 18.3% in Legal Amazonia (13.1 Pg C) and 16.7% in the Amazonia biome (11.2 Pg C) through 2013, excluding carbon loss from the effects of fragmentation, selective logging, fires, mortality induced by recent droughts and clearing of forest regrowth. In spite of the loss of carbon from clearing, large amounts of carbon were stored in stands of remaining vegetation in 2013, equivalent to 149 Mg C ha(-1) when weighted by the total area covered by each vegetation type in Legal Amazonia. Native vegetation in Legal Amazonia in 2013 originally contained 58.6 Pg C, while that in the Amazonia biome contained 56 Pg C. Emissions per unit area from clearing could potentially be larger in the future because previously cleared areas were mainly covered by vegetation with lower mean biomass than the remaining vegetation. Estimates of original biomass are essential for estimating losses to forest degradation. This study offers estimates of cumulative biomass loss, as well as estimates of premodern carbon stocks that have not been represented in recent estimates of deforestation impacts.

Soil texture and altitude, respectively, largely determine the floristic gradient of the most diverse fog oasis in the Peruvian desert

Studying species turnover along gradients is a key topic in tropical ecology. Crucial drivers, among others, are fog deposition and soil properties. In northern Peru, a fog-dependent vegetation formation develops on mountains along the hyper-arid coast. Despite their uniqueness, these fog oases are largely uninvestigated. This study addresses the influence of environmental factors on the vegetation of these unique fog oases. Accordingly, vegetation and soil properties were recorded on 66 4 × 4-m plots along an altitudinal gradient ranging from 200 to 950 m asl. Ordination and modelling techniques were used to study altitudinal vegetation belts and floristic composition. Four vegetation belts were identified: a low-elevation Tillandsia belt, a herbaceous belt, a bromeliad belt showing highest species richness and an uppermost succulent belt. Different altitudinal levels might reflect water availability, which is highest below the temperature inversion at around 700 m asl. Altitude alone explained 96% of the floristic composition. Soil texture and salinity accounted for 88%. This is in contrast with more humid tropical ecosystems where soil nutrients appear to be more important. Concluding, this study advances the understanding of tropical gradients in fog-dependent and ENSO-affected ecosystems.

Neotropical primary productivity affects biomass of the leaf-litter herpetofaunal assemblage

Soil fertility and plant productivity are known to vary across the Amazon Basin partially as a function of geomorphology and age of soils. Using data on herpetofaunal abundance collected from 5 × 5 m and 6 × 6 m plots in mature tropical forests, we tested whether variation in community biomass of litter frogs and lizards across ten Neotropical sites could be explained by cation exchange capacity, primary productivity or stem turnover rate. About half of the variation in frog biomass (48%) could be attributed to stem turnover rate, while over two-thirds of the variation in lizard biomass (69%) was explained by primary productivity. Biomass variation in frogs resulted from variation in abundance and size, and abundance was related to cation exchange capacity (45% of variation explained), but size was not. Lizard biomass across sites varied mostly with individual lizard size, but not with abundance, and size was highly dependent on primary productivity (85% of variation explained). Soil fertility and plant productivity apparently affect secondary consumers like frogs and lizards through food webs, as biomass is transferred from plants to herbivorous arthropods to secondary consumers.