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Yuan G, Zheng Y, Sun X. Unveiling Microbial Dynamics: How Forest Aging Shapes the Microbial Communities of Pinus massoniana. Ecol Evol 2025; 15:e71132. [PMID: 40071151 PMCID: PMC11896641 DOI: 10.1002/ece3.71132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2024] [Revised: 02/10/2025] [Accepted: 02/28/2025] [Indexed: 03/14/2025] Open
Abstract
Plants host diverse microbial communities essential for nutrient acquisition, growth, and responses to biotic and abiotic stresses. Despite their importance, the variation and stability of these communities during forest succession remain poorly understood. This study investigated the microbial communities in Pinus massoniana forests at different stand ages (12, 22, 30, and 40 years). Results showed that the phyllosphere and roots of P. massoniana harbor diverse microbial communities, which shift dynamically with forest aging. Bacterial species diversity consistently surpassed fungal diversity across all habitats. Forest aging significantly influenced the alpha diversity of phyllosphere and soil microbes, whereas root-associated microbial diversity remained stable. Co-occurrence network analysis revealed that bacterial communities formed more complex networks than fungal communities and exhibited greater stability. Functional annotation confirmed that bacterial communities were functionally more stable, predominantly involving metabolic processes. In contrast, endophytes dominated the phyllosphere fungi, while ectomycorrhizal fungi were prevalent in root and soil fungal communities. Environmental factors, including total nitrogen, total phosphorus, available potassium, and pH, emerged as key drivers of microbial dynamics. These findings provide novel insights into the differing responses of bacterial and fungal communities to forest aging, highlighting the critical role of ecological niches in shaping microbial dynamics.
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Affiliation(s)
- Guiyun Yuan
- Institute for Forest Resources and Environment of GuizhouGuizhou UniversityGuiyangChina
- Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou ProvinceGuizhou UniversityGuiyangGuizhouChina
- College of ForestryGuizhou UniversityGuiyangChina
| | - Yang Zheng
- Institute for Forest Resources and Environment of GuizhouGuizhou UniversityGuiyangChina
- Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou ProvinceGuizhou UniversityGuiyangGuizhouChina
- College of ForestryGuizhou UniversityGuiyangChina
| | - Xueguang Sun
- Institute for Forest Resources and Environment of GuizhouGuizhou UniversityGuiyangChina
- Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou ProvinceGuizhou UniversityGuiyangGuizhouChina
- College of ForestryGuizhou UniversityGuiyangChina
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2
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Jörgensen K, Clemmensen KE, Wallander H, Lindahl BD. Ectomycorrhizal fungi are more sensitive to high soil nitrogen levels in forests exposed to nitrogen deposition. THE NEW PHYTOLOGIST 2024; 242:1725-1738. [PMID: 38213001 DOI: 10.1111/nph.19509] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Accepted: 12/11/2023] [Indexed: 01/13/2024]
Abstract
Ectomycorrhizal fungi are essential for nitrogen (N) cycling in many temperate forests and responsive to anthropogenic N addition, which generally decreases host carbon (C) allocation to the fungi. In the boreal region, however, ectomycorrhizal fungal biomass has been found to correlate positively with soil N availability. Still, responses to anthropogenic N input, for instance through atmospheric deposition, are commonly negative. To elucidate whether variation in N supply affects ectomycorrhizal fungi differently depending on geographical context, we investigated ectomycorrhizal fungal communities along fertility gradients located in two nemo-boreal forest regions with similar ranges in soil N : C ratios and inorganic N availability but contrasting rates of N deposition. Ectomycorrhizal biomass and community composition remained relatively stable across the N gradient with low atmospheric N deposition, but biomass decreased and the community changed more drastically with increasing N availability in the gradient subjected to higher rates of N deposition. Moreover, potential activities of enzymes involved in ectomycorrhizal mobilisation of organic N decreased as N availability increased. In forests with low external input, we propose that stabilising feedbacks in tree-fungal interactions maintain ectomycorrhizal fungal biomass and communities even in N-rich soils. By contrast, anthropogenic N input seems to impair ectomycorrhizal functions.
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Affiliation(s)
- Karolina Jörgensen
- Department of Soil and Environment, Swedish University of Agricultural Sciences, Box 7014, SE-750 07, Uppsala, Sweden
| | - Karina E Clemmensen
- Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, SE-750 07, Uppsala, Sweden
| | - Håkan Wallander
- Department of Biology, Lund University, Sölvegatan 37, 223 26, Lund, Sweden
| | - Björn D Lindahl
- Department of Soil and Environment, Swedish University of Agricultural Sciences, Box 7014, SE-750 07, Uppsala, Sweden
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3
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Scartazza A, Sbrana C, D'Andrea E, Matteucci G, Rezaie N, Lauteri M. Above- and belowground interplay: Canopy CO 2 uptake, carbon and nitrogen allocation and isotope fractionation along the plant-ectomycorrhiza continuum. PLANT, CELL & ENVIRONMENT 2023; 46:889-900. [PMID: 36541420 DOI: 10.1111/pce.14519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 12/02/2022] [Accepted: 12/17/2022] [Indexed: 06/17/2023]
Abstract
In forests, mycorrhizal fungi regulate carbon (C) and nitrogen (N) dynamics. We evaluated the interplay among ectomycorrhizas (ECM), ecosystem C fluxes, tree productivity, C and N exchange and isotopic fractionation along the soil-ECM-plant continuum in a Mediterranean beech forest. From bud break to leaf shedding, we monitored: net ecosystem exchange (NEE, a measure of the net exchange of C between an ecosystem and the atmosphere), leaf area index, stem growth, N concentration, δ13 C and δ15 N in rhizosphere soil, ectomycorrhizal fine root tips (ERT), ECM-free fine root portions (NCR) and leaves. Seasonal changes in ERT relative biomass were strictly related to NEE and mimicked those detected in the radial growth. The analysis of δ13 C in ERT, leaves and NCR highlighted the impact of canopy photosynthesis on ERT development and an asynchronous seasonal C allocation strategy between ERT and NCR at the root tips level. Concerning N, δ15 N of leaves was negatively related to that of ERT and dependent on seasonal 15 N differences between ERT and NCR. Our results unravel a synchronous C allocation towards ERT and tree stem driven by the increasing NEE in spring-early summer. Moreover, they highlighted a phenology-dependent 15 N fractionation during N transfer from ECM to their hosts. This evidence, obtained in mature beech trees under natural conditions, may improve the knowledge of Mediterranean forests functionality.
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Affiliation(s)
- Andrea Scartazza
- Research Institute on Terrestrial Ecosystems, National Research Council of Italy (CNR-IRET), Pisa, Italy
- National Biodiversity Future Center (NBFC), Palermo, Italy
| | - Cristiana Sbrana
- Institute of Agricultural Biology and Biotechnology, National Research Council of Italy (CNR-IBBA), Pisa, Italy
| | - Ettore D'Andrea
- National Biodiversity Future Center (NBFC), Palermo, Italy
- Research Institute on Terrestrial Ecosystems, National Research Council of Italy (CNR-IRET), Porano, Italy
| | - Giorgio Matteucci
- National Biodiversity Future Center (NBFC), Palermo, Italy
- Institute for BioEconomy, National Research Council of Italy (CNR-IBE), Sesto Fiorentino, Italy
| | - Negar Rezaie
- Research Institute on Terrestrial Ecosystems, National Research Council of Italy (CNR-IRET), Napoli, Italy
| | - Marco Lauteri
- Research Institute on Terrestrial Ecosystems, National Research Council of Italy (CNR-IRET), Porano, Italy
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4
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Khalid M, Tan H, Ali M, Rehman A, Liu X, Su L, Zhao C, Li X, Hui N. Karst rocky desertification diverged the soil residing and the active ectomycorrhizal fungal communities thereby fostering distinctive extramatrical mycelia. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 807:151016. [PMID: 34666083 DOI: 10.1016/j.scitotenv.2021.151016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Revised: 10/09/2021] [Accepted: 10/12/2021] [Indexed: 06/13/2023]
Abstract
Ectomycorrhizal fungi (EMF) are mutualists that play crucial roles in liberation, nutrient acquisition, transfer of growth-limiting resources and provision of water to host plants in terrestrial ecosystems, particularly in stressed prone climates. In this study, a field-based experiment was performed in Yunnan, China to assess the effect of karst rocky desertification (KRD) and natural forests (non-KRD) sites on the richness and composition of EMF communities. Inert sand-filled mesh bags were employed to characterize the active EMF and quantify the production of extramatrical mycelium (EMM). Results indicated that, EMF exhibited a significant differentiation among KRD and non-KRD sites, richness and diversity were higher across KRD areas, whereas the evenness showed the opposite trend. Ascomycota and Zygomycota were greater across KRD sites, however, Basidiomycota showed no difference across both study sites. The relative abundance of Clavaria, Butyriboletus, Odontia, Phyloporus, Helvella, Russula and Tomentella were higher across the KRD sites, whereas, Clavulinopsis, Endogone, Amanita, Inocybe and Clavulina were higher across the non-KRD sites. It's worth noting that, saprophytic (SAP) fungal community was found to be more abundant in the soil than the mesh bags at both sites particularly at KRD sites, which likely provide more free space and less competition for the EMF to thrive well in the mesh bags. In similar pattern, ergosterol concentration in mesh bags was observed relatively higher at KRD sites than the non-KRD sites. The Entoloma, Amanita, and Sebacina were found to be substantially higher in mesh bags than soil across both sites. Delicatula, Helvella and Tomentella on the other hand, showed higher relative abundance in mesh bags than soil over KRD sites, however they did not differ across non-KRD sites. Taken together, the presented results highlight relationship between the EMF community and the complex KRD environment, which is very important for the restoration of disturbed karst landscapes.
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Affiliation(s)
- Muhammad Khalid
- Key Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Haoxin Tan
- Key Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Mehran Ali
- School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Asad Rehman
- School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Xinxin Liu
- Key Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Lantian Su
- Key Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Chang Zhao
- Key Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Xiaoxiao Li
- Key Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Nan Hui
- Key Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China; Shanghai Yangtze River Delta Eco-Environmental Change and Management Observation and Research Station, Ministry of Science and Technology, Ministry of Education, 800 Dongchuan Rd, Shanghai 200240, China; Shanghai Urban Forest Ecosystem Research Station, National Forestry and Grassland Administration, 800 Dongchuan Rd., Shanghai 200240, China.
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5
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Gorfer M, Mayer M, Berger H, Rewald B, Tallian C, Matthews B, Sandén H, Katzensteiner K, Godbold DL. High Fungal Diversity but Low Seasonal Dynamics and Ectomycorrhizal Abundance in a Mountain Beech Forest. MICROBIAL ECOLOGY 2021; 82:243-256. [PMID: 33755773 PMCID: PMC8282586 DOI: 10.1007/s00248-021-01736-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Accepted: 03/10/2021] [Indexed: 05/05/2023]
Abstract
Forests on steep slopes constitute a significant proportion of European mountain areas and are important as production and protection forests. This study describes the soil fungal community structure in a European beech-dominated mountain forest stands in the Northern Calcareous Alps and investigates how it is determined by season and soil properties. Samples were collected at high spatial resolution in an area of ca. 100 m × 700 m in May (spring) and August (summer). Illumina MiSeq high-throughput sequencing of the ITS2-region revealed distinct patterns for the soil fungal communities. In contrast to other studies from temperate European beech forest stands, Ascomycota dominated the highly diverse fungal community, while ectomycorrhizal fungi were of lower abundance. Russulaceae, which are often among the dominant ectomycorrhizal fungi associated with European beech, were absent from all samples. Potentially plant pathogenic fungi were more prevalent than previously reported. Only subtle seasonal differences were found between fungal communities in spring and summer. Especially, dominant saprotrophic taxa were largely unaffected by season, while slightly stronger effects were observed for ectomycorrhizal fungi. Soil characteristics like pH and organic carbon content, on the other hand, strongly shaped abundant taxa among the saprotrophic fungal community.
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Affiliation(s)
- Markus Gorfer
- Bioresources Unit, Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria
| | - Mathias Mayer
- Forest Ecology, Dept. of Forest and Soil Sciences, University of Natural Resources and Life Sciences (BOKU), Peter-Jordan-Strasse 82, 1190, Vienna, Austria
- Forest Soils and Biogeochemistry, Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Birmensdorf, Switzerland
| | | | - Boris Rewald
- Forest Ecology, Dept. of Forest and Soil Sciences, University of Natural Resources and Life Sciences (BOKU), Peter-Jordan-Strasse 82, 1190, Vienna, Austria.
| | - Claudia Tallian
- Bioresources Unit, Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria
| | - Bradley Matthews
- Forest Ecology, Dept. of Forest and Soil Sciences, University of Natural Resources and Life Sciences (BOKU), Peter-Jordan-Strasse 82, 1190, Vienna, Austria
- Environment Agency Austria, Vienna, Austria
| | - Hans Sandén
- Forest Ecology, Dept. of Forest and Soil Sciences, University of Natural Resources and Life Sciences (BOKU), Peter-Jordan-Strasse 82, 1190, Vienna, Austria
| | - Klaus Katzensteiner
- Forest Ecology, Dept. of Forest and Soil Sciences, University of Natural Resources and Life Sciences (BOKU), Peter-Jordan-Strasse 82, 1190, Vienna, Austria
| | - Douglas L Godbold
- Forest Ecology, Dept. of Forest and Soil Sciences, University of Natural Resources and Life Sciences (BOKU), Peter-Jordan-Strasse 82, 1190, Vienna, Austria
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6
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Mundra S, Kjønaas OJ, Morgado LN, Krabberød AK, Ransedokken Y, Kauserud H. Soil depth matters: shift in composition and inter-kingdom co-occurrence patterns of microorganisms in forest soils. FEMS Microbiol Ecol 2021; 97:fiab022. [PMID: 33547899 PMCID: PMC7948073 DOI: 10.1093/femsec/fiab022] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Accepted: 02/04/2021] [Indexed: 02/01/2023] Open
Abstract
Soil depth represents a strong physiochemical gradient that greatly affects soil-dwelling microorganisms. Fungal communities are typically structured by soil depth, but how other microorganisms are structured is less known. Here, we tested whether depth-dependent variation in soil chemistry affects the distribution and co-occurrence patterns of soil microbial communities. This was investigated by DNA metabarcoding in conjunction with network analyses of bacteria, fungi, as well as other micro-eukaryotes, sampled in four different soil depths in Norwegian birch forests. Strong compositional turnover in microbial assemblages with soil depth was detected for all organismal groups. Significantly greater microbial diversity and fungal biomass appeared in the nutrient-rich organic layer, with sharp decrease towards the less nutrient-rich mineral zones. The proportions of copiotrophic bacteria, Arthropoda and Apicomplexa were markedly higher in the organic layer, while patterns were opposite for oligotrophic bacteria, Cercozoa, Ascomycota and ectomycorrhizal fungi. Network analyses indicated more intensive inter-kingdom co-occurrence patterns in the upper mineral layer (0-5 cm) compared to the above organic and the lower mineral soil, signifying substantial influence of soil depth on biotic interactions. This study supports the view that different microbial groups are adapted to different forest soil strata, with varying level of interactions along the depth gradient.
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Affiliation(s)
- Sunil Mundra
- Section for Genetics and Evolutionary Biology (EvoGene), Department of Biosciences, University of Oslo, NO-0316 Oslo, Norway
- Department of Biology, College of Science, United Arab Emirates University, Al-Ain, Abu-Dhabi, UAE
| | - O Janne Kjønaas
- NIBIO, Department of Terrestrial Ecology, NO-1431 Ås, Norway
| | - Luis N Morgado
- Section for Genetics and Evolutionary Biology (EvoGene), Department of Biosciences, University of Oslo, NO-0316 Oslo, Norway
- Naturalis Biodiversity Center, 2300 RA Leiden, the Netherlands
| | - Anders Kristian Krabberød
- Section for Genetics and Evolutionary Biology (EvoGene), Department of Biosciences, University of Oslo, NO-0316 Oslo, Norway
| | - Yngvild Ransedokken
- Faculty of Environmental and Natural Resource Management, Norwegian University of Life Sciences, NO-1432 Ås, Norway
| | - Håvard Kauserud
- Section for Genetics and Evolutionary Biology (EvoGene), Department of Biosciences, University of Oslo, NO-0316 Oslo, Norway
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7
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Fernandez CW, See CR, Kennedy PG. Decelerated carbon cycling by ectomycorrhizal fungi is controlled by substrate quality and community composition. THE NEW PHYTOLOGIST 2020; 226:569-582. [PMID: 31622518 DOI: 10.1111/nph.16269] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2019] [Accepted: 10/07/2019] [Indexed: 05/27/2023]
Abstract
Interactions between symbiotic ectomycorrhizal (EM) and free-living saprotrophs can result in significant deceleration of leaf litter decomposition. While this phenomenon is widely cited, its generality remains unclear, as both the direction and magnitude of EM fungal effects on leaf litter decomposition have been shown to vary among studies. Here we explicitly examine how contrasting leaf litter types and EM fungal communities may lead to differential effects on carbon (C) and nitrogen (N) cycling. Specifically, we measured the response of soil nutrient cycling, litter decay rates, litter chemistry and fungal community structure to the reduction of EM fungi (via trenching) with a reciprocal litter transplant experiment in adjacent Pinus- or Quercus-dominated sites. We found clear evidence of EM fungal suppression of C and N cycling in the Pinus-dominated site, but no suppression in the Quercus-dominated site. Additionally, in the Pinus-dominated site, only the Pinus litter decay rates were decelerated by EM fungi and were associated with decoupling of litter C and N cycling. Our results support the hypothesis that EM fungi can decelerate C cycling via N competition, but strongly suggest that the 'Gadgil effect' is dependent on both substrate quality and EM fungal community composition. We argue that understanding tree host traits as well as EM fungal functional diversity is critical to a more mechanistic understanding of how EM fungi mediate forest soil biogeochemical cycling.
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Affiliation(s)
- Christopher W Fernandez
- Department of Plant and Microbial Biology, University of Minnesota, Saint Paul, MN, 55108, USA
| | - Craig R See
- Department of Ecology, Evolution and Behavior, University of Minnesota, Saint Paul, MN, 55108, USA
| | - Peter G Kennedy
- Department of Plant and Microbial Biology, University of Minnesota, Saint Paul, MN, 55108, USA
- Department of Ecology, Evolution and Behavior, University of Minnesota, Saint Paul, MN, 55108, USA
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8
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Stephens RB, Trowbridge AM, Ouimette AP, Knighton WB, Hobbie EA, Stoy PC, Rowe RJ. Signaling from below: rodents select for deeper fruiting truffles with stronger volatile emissions. Ecology 2020; 101:e02964. [PMID: 31872867 DOI: 10.1002/ecy.2964] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/26/2019] [Revised: 10/15/2019] [Accepted: 11/05/2019] [Indexed: 11/11/2022]
Abstract
Many plant and fungal species use volatile organic compounds (VOCs) as chemical signals to convey information about the location or quality of their fruits or fruiting bodies to animal dispersers. Identifying the environmental factors and biotic interactions that shape fruit selection by animals is key to understanding the evolutionary processes that underpin chemical signaling. Using four Elaphomyces truffle species, we explored the role of fruiting depth, VOC emissions, and protein content in selection by five rodent species. We used stable isotope analysis of nitrogen (δ15 N) in truffles to estimate fruiting depth, proton-transfer-reaction mass spectrometry to determine volatile emission composition, and nitrogen concentrations to calculate digestible protein of truffles. We coupled field surveys of truffle availability with truffle spore loads in rodent scat to determine selection by rodents. Despite presumably easier access to the shallow fruiting species, E. americanus (0.5-cm depth) and E. verruculosus (2.5-cm depth), most rodents selected for truffles fruiting deeper in the soil, E. macrosporus (4.1-cm depth) and E. bartlettii (5.0-cm depth). The deeper fruiting species had distinct VOC profiles and produced significantly higher quantities of odiferous compounds. Myodes gapperi (southern red-backed vole), a fungal specialist, also selected for truffles with high levels of digestible protein, E. verruculosus and E. macrosporus. Our results highlight the importance of chemical signals in truffle selection by rodents and suggest that VOCs are under strong selective pressures relative to protein rewards. Strong chemical signals likely allow detection of truffles deep within the soil and reduce foraging effort by rodents. For rodents that depend on fungi as a major food source, protein content may also be important in selecting truffles.
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Affiliation(s)
- Ryan B Stephens
- Natural Resources and the Environment, University of New Hampshire, 114 James Hall, 56 College Road, Durham, New Hampshire, 03824, USA
| | - Amy M Trowbridge
- Department of Entomology, University of Wisconsin, Madison, Wisconsin, 53706, USA
| | - Andrew P Ouimette
- Earth Systems Research Center, University of New Hampshire, Morse Hall, 8 College Road, Durham, New Hampshire, 03824, USA
| | - W Berk Knighton
- Department of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, 59717, USA
| | - Erik A Hobbie
- Earth Systems Research Center, University of New Hampshire, Morse Hall, 8 College Road, Durham, New Hampshire, 03824, USA
| | - Paul C Stoy
- Department of Biological Systems Engineering, University of Wisconsin, Madison, Wisconsin, 53706, USA
| | - Rebecca J Rowe
- Natural Resources and the Environment, University of New Hampshire, 114 James Hall, 56 College Road, Durham, New Hampshire, 03824, USA
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9
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Accounting for Carbon Flux to Mycorrhizal Fungi May Resolve Discrepancies in Forest Carbon Budgets. Ecosystems 2019. [DOI: 10.1007/s10021-019-00440-3] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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10
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Tedersoo L, Bahram M. Mycorrhizal types differ in ecophysiology and alter plant nutrition and soil processes. Biol Rev Camb Philos Soc 2019; 94:1857-1880. [PMID: 31270944 DOI: 10.1111/brv.12538] [Citation(s) in RCA: 108] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Revised: 05/27/2019] [Accepted: 05/30/2019] [Indexed: 12/13/2022]
Abstract
Mycorrhizal fungi benefit plants by improved mineral nutrition and protection against stress, yet information about fundamental differences among mycorrhizal types in fungi and trees and their relative importance in biogeochemical processes is only beginning to accumulate. We critically review and synthesize the ecophysiological differences in ectomycorrhizal, ericoid mycorrhizal and arbuscular mycorrhizal symbioses and the effect of these mycorrhizal types on soil processes from local to global scales. We demonstrate that guilds of mycorrhizal fungi display substantial differences in genome-encoded capacity for mineral nutrition, particularly acquisition of nitrogen and phosphorus from organic material. Mycorrhizal associations alter the trade-off between allocation to roots or mycelium, ecophysiological traits such as root exudation, weathering, enzyme production, plant protection, and community assembly as well as response to climate change. Mycorrhizal types exhibit differential effects on ecosystem carbon and nutrient cycling that affect global elemental fluxes and may mediate biome shifts in response to global change. We also note that most studies performed to date have not been properly replicated and collectively suffer from strong geographical sampling bias towards temperate biomes. We advocate that combining carefully replicated field experiments and controlled laboratory experiments with isotope labelling and -omics techniques offers great promise towards understanding differences in ecophysiology and ecosystem services among mycorrhizal types.
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Affiliation(s)
- Leho Tedersoo
- Natural History Museum, University of Tartu, 14a Ravila, 50411 Tartu, Estonia.,Institute of Ecology and Earth Sciences, University of Tartu, 14a Ravila, 50411 Tartu, Estonia
| | - Mohammad Bahram
- Institute of Ecology and Earth Sciences, University of Tartu, 14a Ravila, 50411 Tartu, Estonia.,Department of Ecology, Swedish University of Agricultural Sciences, Ulls väg 16, 756 51 Uppsala, Sweden
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11
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Chen J, Heikkinen J, Hobbie E, Rinne-Garmston K, Penttilä R, Mäkipää R. Strategies of carbon and nitrogen acquisition by saprotrophic and ectomycorrhizal fungi in Finnish boreal Picea abies-dominated forests. Fungal Biol 2019; 123:456-464. [DOI: 10.1016/j.funbio.2019.03.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2019] [Accepted: 03/20/2019] [Indexed: 10/27/2022]
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12
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Fertilization alters nitrogen isotopes and concentrations in ectomycorrhizal fungi and soil in pine forests. FUNGAL ECOL 2019. [DOI: 10.1016/j.funeco.2018.12.013] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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13
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Effect of Deadwood on Ectomycorrhizal Colonisation of Old-Growth Oak Forests. FORESTS 2019. [DOI: 10.3390/f10060480] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Although the importance of coarse woody debris (CWD) for species diversity is recognized, the effects of coarse woody debris decay class on species composition have received little attention. We examined how the species composition of ectomycorrhizal fungi (ECM) changes with CWD decay. We describe ectomycorrhizal root tips and the diversity of mycorrhizal fungal species at three English oak (Quercus robur L.) sites. DNA barcoding revealed a total of 17 ECM fungal species. The highest degree of mycorrhizal colonization was found in CWDadvanced (27.2%) and CWDearly (27.1%). Based on exploration types, ectomycorrhizae were classified with respect to ecologically relevant soil features. The short distance type was significantly correlated with soil P2O5, while the contact type was correlated with soil C/N. The lowest mean content of soil Corg was found in the CWDabsent site. The difference in total soil N between sites decreased with increasing CWD decomposition, whereas total C/N increased correspondingly. In this study we confirmed that soil CWD stimulates ectomycorrhizal fungi, representing contact or short-distance exploration types of mycelium.
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14
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Yang N, Butenschoen O, Rana R, Köhler L, Hertel D, Leuschner C, Scheu S, Polle A, Pena R. Leaf litter species identity influences biochemical composition of ectomycorrhizal fungi. MYCORRHIZA 2019; 29:85-96. [PMID: 30547252 DOI: 10.1007/s00572-018-0876-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Revised: 10/25/2018] [Accepted: 12/04/2018] [Indexed: 06/09/2023]
Abstract
In forest ecosystems, ectomycorrhizal (ECM) fungi are important for plant growth and soil biogeochemical processes. The biochemical composition of ECM mycelium is an important fungal effect trait with consequences for its decomposition rate, and consequently on soil carbon pools and plant nutrition. Although the link between ECM fungi and leaf litter-released nutrients is well known, the response of ECM fungal biochemical composition to different leaf litter species remains poorly understood. To determine how leaf litter quality influences ECM fungi's biochemical profiles, we planted young beech trees in an oak forest and replaced the natural leaf litter with that of European beech (Fagus sylvatica), ash (Fraxinus excelsior), maple (Acer pseudoplatanus), or lime (Tilia cordata). We assessed the biochemical profiles of ECM root tips colonized by common fungal taxa in temperate forests (i.e., Cenococcum geophilum, Inocybe sp., and Lactarius subdulcis), using attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR). ECM fungal biochemical composition changed with leaf litter species. Changes were apparent in the infrared absorption bands assigned to functional groups of lipids, amides, and carbohydrates. C. geophilum and L. subdulcis exhibited large spectral differences corresponding to the initial pattern of leaf litter chemical composition between samples collected in the beech and ash leaf litter treatments. In contrast, Inocybe sp. was influenced by lime, but with no differences between samples from ash or beech leaf litter treatments. Although the spectral bands affected by leaf litter type differed among ECM fungi, they were mainly related to amides, indicating a dynamic response of the fungal proteome to soil nutritional changes. Overall, the results indicate that the biochemical response of ECM fungi to leaf litter species varies among ECM fungal species and suggests that the biochemical composition of ECM mycelium is a fungal response trait, sensitive to environmental changes such as shifts in leaf litter species.
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Affiliation(s)
- Nan Yang
- Forest Botany and Tree Physiology, University of Goettingen, Buesgenweg 2, 37077, Goettingen, Germany
- College of Biology and the Environment, Nanjing Forestry University, Nanjing, China
| | - Olaf Butenschoen
- J. F. Blumenbach Institute of Zoology and Anthropology, University of Goettingen, Untere Karspüle 2, 37073, Goettingen, Germany
- Senckenberg Biodiversity and Climate Research Centre BiK-F, Georg-Voigt-Straße 14-16, 60325, Frankfurt am Main, Germany
| | - Rumana Rana
- Forest Botany and Tree Physiology, University of Goettingen, Buesgenweg 2, 37077, Goettingen, Germany
- Forestry and Wood Technology Discipline, Khulna University, Khulna, 9208, Bangladesh
| | - Lars Köhler
- Plant Ecology and Ecosystem Research, University of Goettingen, Untere Karspüle 2, 37073, Goettingen, Germany
| | - Dietrich Hertel
- Plant Ecology and Ecosystem Research, University of Goettingen, Untere Karspüle 2, 37073, Goettingen, Germany
| | - Christoph Leuschner
- Plant Ecology and Ecosystem Research, University of Goettingen, Untere Karspüle 2, 37073, Goettingen, Germany
| | - Stefan Scheu
- J. F. Blumenbach Institute of Zoology and Anthropology, University of Goettingen, Untere Karspüle 2, 37073, Goettingen, Germany
- Centre of Biodiversity and Sustainable Land Use, University of Goettingen, 37073, Goettingen, Germany
| | - Andrea Polle
- Forest Botany and Tree Physiology, University of Goettingen, Buesgenweg 2, 37077, Goettingen, Germany
- Centre of Biodiversity and Sustainable Land Use, University of Goettingen, 37073, Goettingen, Germany
| | - Rodica Pena
- Forest Botany and Tree Physiology, University of Goettingen, Buesgenweg 2, 37077, Goettingen, Germany.
- Centre of Biodiversity and Sustainable Land Use, University of Goettingen, 37073, Goettingen, Germany.
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15
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Halbwachs H, Easton GL, Bol R, Hobbie EA, Garnett MH, Peršoh D, Dixon L, Ostle N, Karasch P, Griffith GW. Isotopic evidence of biotrophy and unusual nitrogen nutrition in soil-dwelling Hygrophoraceae. Environ Microbiol 2018; 20:3573-3588. [PMID: 30105856 PMCID: PMC6849620 DOI: 10.1111/1462-2920.14327] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2017] [Revised: 06/14/2018] [Accepted: 06/14/2018] [Indexed: 02/04/2023]
Abstract
Several lines of evidence suggest that the agaricoid, non-ectomycorrhizal members of the family Hygrophoraceae (waxcaps) are biotrophic with unusual nitrogen nutrition. However, methods for the axenic culture and lab-based study of these organisms remain to be developed, so our current knowledge is limited to field-based investigations. Addition of nitrogen, lime or organophosphate pesticide at an experimental field site (Sourhope) suppressed fruiting of waxcap basidiocarps. Furthermore, stable isotope natural abundance in basidiocarps were unusually high in 15 N and low in 13 C, the latter consistent with mycorrhizal nutritional status. Similar patterns were found in waxcap basidiocarps from diverse habitats across four continents. Additional data from 14 C analysis of basidiocarps and 13 C pulse label experiments suggest that these fungi are not saprotrophs but rather biotrophic endophytes and possibly mycorrhizal. The consistently high but variable δ15 N values (10-20‰) of basidiocarps further indicate that N acquisition or processing differ from other fungi; we suggest that N may be derived from acquisition of N via soil fauna high in the food chain.
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Affiliation(s)
- Hans Halbwachs
- Bavarian Forest National ParkFreyunger Str. 2, 94481, GrafenauGermany
| | - Gary L. Easton
- Institute of Biological, Environmental and Rural Sciences, Aberystwyth UniversityAdeilad Cledwyn, Penglais, Aberystwyth, Ceredigion, SY23 3DD, WalesUK
| | - Roland Bol
- Institute of Bio‐ and Geosciences, Agrosphere (IBG‐3). Forschungszentrum Jülich GmbHWilhelm‐Johnen‐Straße, 52428, JülichGermany
| | - Erik A. Hobbie
- Earth Systems Research Center, Morse HallUniversity of New Hampshire8 College Road, DurhamNH, 03824‐3525USA
| | - Mark H Garnett
- NERC Radiocarbon FacilityScottish Enterprise Technology ParkRankine Avenue, East Kilbride, G75 0QFScotland, UK
| | - Derek Peršoh
- Department of GeobotanyRuhr‐Universität BochumGebäude ND 03/170, Universitätsstraße 150, 44780, BochumGermany
| | - Liz Dixon
- Sustainable Soils and Grassland Systems, Rothamsted ResearchNorth Wyke, Okehampton, Devon, EX20 2SBEngland, UK
| | - Nick Ostle
- Lancaster Environment CentreLancaster UniversityLancaster, LA1 4YQEngland, UK
| | - Peter Karasch
- German Mycological SocietyKirchl 78. D‐94545, HohenauGermany
| | - Gareth W. Griffith
- Institute of Biological, Environmental and Rural Sciences, Aberystwyth UniversityAdeilad Cledwyn, Penglais, Aberystwyth, Ceredigion, SY23 3DD, WalesUK
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16
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Antibus RK, Hobbie EA, Cripps CL. Sporocarp δ15N and use of inorganic and organic nitrogen in vitro differ among host-specific suilloid fungi associated with high elevation five-needle pines. MYCOSCIENCE 2018. [DOI: 10.1016/j.myc.2017.11.007] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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17
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Hobbie EA, Rice SF, Weber NS, Smith JE. Isotopic evidence indicates saprotrophy in post-fire Morchella in Oregon and Alaska. Mycologia 2017; 108:638-45. [DOI: 10.3852/15-281] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2015] [Accepted: 02/10/2016] [Indexed: 11/10/2022]
Affiliation(s)
| | - Samuel F. Rice
- Earth Systems Research Center, University of New Hampshire, Durham, New Hampshire 03824
| | - Nancy S. Weber
- Department of Forest Ecosystems and Society, Oregon State University, 2160 NW Beechwood Place, Corvallis, Oregon 97330
| | - Jane E. Smith
- US Department of Agriculture, Forest Service, Pacific Northwest Research Station, Forestry Sciences Laboratory, 3200 SW Jefferson Way, Corvallis, Oregon 97331
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18
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Trappe MJ, Smith ME, Hobbie EA. Exploring the phylogenetic affiliations and the trophic mode of Sedecula pulvinata (Sedeculaceae). Mycologia 2017; 107:688-96. [DOI: 10.3852/14-110] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2014] [Accepted: 02/02/2015] [Indexed: 11/10/2022]
Affiliation(s)
- Matthew J. Trappe
- Department of Forest Ecosystems and Society, 321 Richardson Hall, Oregon State University, Corvallis, Oregon 97331
| | - Matthew E. Smith
- Department of Plant Pathology, University of Florida, 2517 Fifield Hall, Gainesville, Florida 32611
| | - Erik A. Hobbie
- Earth Systems Research Center, University of New Hampshire, Durham, New Hampshire 03824
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19
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Chen J, Hofmockel KS, Hobbie EA. Isotopic Analysis of Sporocarp Protein and Structural Material Improves Resolution of Fungal Carbon Sources. Front Microbiol 2016; 7:1994. [PMID: 28082951 PMCID: PMC5183622 DOI: 10.3389/fmicb.2016.01994] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Accepted: 11/28/2016] [Indexed: 11/13/2022] Open
Abstract
Fungal acquisition of resources is difficult to assess in the field. To determine whether fungi received carbon from recent plant photosynthate, litter or soil-derived organic (C:N bonded) nitrogen, we examined differences in δ13C among bulk tissue, structural carbon, and protein extracts of sporocarps of three fungal types: saprotrophic fungi, fungi with hydrophobic ectomycorrhizae, or fungi with hydrophilic ectomycorrhizae. Sporocarps were collected from experimental plots of the Duke Free-air CO2 enrichment experiment during and after CO2 enrichment. The differential 13C labeling of ecosystem pools in CO2 enrichment experiments was tracked into fungi and provided novel insights into organic nitrogen use. Specifically, sporocarp δ13C as well as δ15N of protein and structural material indicated that fungi with hydrophobic ectomycorrhizae used soil-derived organic nitrogen sources for protein carbon, fungi with hydrophilic ectomycorrhizae used recent plant photosynthates for protein carbon and both fungal groups used photosynthates for structural carbon. Saprotrophic fungi depended on litter produced during fumigation for both protein and structural material.
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Affiliation(s)
- Janet Chen
- Earth, Oceans and Space, Earth Systems Research Center, University of New HampshireDurham, NH, USA
- Soil and Water Management and Crop Nutrition Laboratory, FAO/IAEA Agriculture and Biotechnology LaboratoriesSeibersdorf, Austria
| | - Kirsten S. Hofmockel
- Department of Ecology, Evolution and Organismal Biology, Iowa State UniversityAmes, IA, USA
- Environmental Molecular Sciences Laboratory and Biological Sciences Division, Pacific Northwest National LaboratoryRichland, WA, USA
| | - Erik A. Hobbie
- Earth, Oceans and Space, Earth Systems Research Center, University of New HampshireDurham, NH, USA
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20
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Kumla J, Hobbie EA, Suwannarach N, Lumyong S. The ectomycorrhizal status of a tropical black bolete, Phlebopus portentosus, assessed using mycorrhizal synthesis and isotopic analysis. MYCORRHIZA 2016; 26:333-343. [PMID: 26671421 DOI: 10.1007/s00572-015-0672-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2015] [Accepted: 11/30/2015] [Indexed: 06/05/2023]
Abstract
Phlebopus portentosus is one of the most popular wild edible mushrooms in Thailand and can produce sporocarps in the culture without a host plant. However, it is still unclear whether Phlebopus portentosus is a saprotrophic, parasitic, or ectomycorrhizal (ECM) fungus. In this study, Phlebopus portentosus sporocarps were collected from northern Thailand and identified based on morphological and molecular characteristics. We combined mycorrhizal synthesis and stable isotopic analysis to investigate the trophic status of this fungus. In a greenhouse experiment, ECM-like structures were observed in Pinus kesiya at 1 year after inoculation with fungal mycelium, and the association of Phlebopus portentosus and other plant species showed superficial growth over the root surface. Fungus-colonized root tips were described morphologically and colonization confirmed by molecular methods. In stable isotope measurements, the δ(13)C and δ(15)N of natural samples of Phlebopus portentosus differed from saprotrophic fungi. Based on the isotopic patterns of Phlebopus portentosus and its ability to form ECM-like structures in greenhouse experiments, we conclude that Phlebopus portentosus could be an ECM fungus.
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Affiliation(s)
- Jaturong Kumla
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand
| | - Erik A Hobbie
- Earth Systems Research Center, Morse Hall, University of New Hampshire, Durham, NH, 03824, USA
| | - Nakarin Suwannarach
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand
| | - Saisamorn Lumyong
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
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21
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Hendricks JJ, Mitchell RJ, Kuehn KA, Pecot SD. Ectomycorrhizal fungal mycelia turnover in a longleaf pine forest. THE NEW PHYTOLOGIST 2016; 209:1693-1704. [PMID: 26537020 DOI: 10.1111/nph.13729] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2015] [Accepted: 09/25/2015] [Indexed: 06/05/2023]
Abstract
Elucidation of the patterns and controls of carbon (C) flow and nitrogen (N) cycling in forests has been hindered by a poor understanding of ectomycorrhizal fungal mycelia (EFM) dynamics. In this study, EFM standing biomass (based on soil ergosterol concentrations), production (based on ergosterol accrual in ingrowth cores), and turnover rate (the quotient of annual production and average standing biomass estimates) were assessed in a 25-yr-old longleaf pine (Pinus palustris) plantation where C flow was manipulated by foliar scorching and N fertilization for 5 yr before study initiation. In the controls, EFM standing biomass was 30 ± 7 g m(-2) , production was 279 ± 63 g m(-2) yr(-1) , and turnover rate was 10 ± 3 times yr(-1) . The scorched × fertilized treatment had significantly higher EFM standing biomass (38 ± 8 g m(-2) ), significantly lower production (205 ± 28 g m(-2) yr(-1) ), and a trend of decreased turnover rate (6 ± 1 times yr(-1) ). The EFM turnover estimates, which are among the first reported for natural systems, indicate that EFM are a dynamic component of ecosystems, and that conventional assessments have probably underestimated the role of EFM in C flow and nutrient cycling.
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Affiliation(s)
- Joseph J Hendricks
- Department of Biology, University of West Georgia, 1601 Maple Street, Carrollton, GA, 30118, USA
| | - Robert J Mitchell
- Joseph W. Jones Ecological Research Center at Ichauway, 3988 Jones Center Drive, Newton, GA, 39870, USA
| | - Kevin A Kuehn
- Department of Biological Sciences, The University of Southern Mississippi, 118 College Drive, Hattiesburg, MS, 39406, USA
| | - Stephen D Pecot
- Joseph W. Jones Ecological Research Center at Ichauway, 3988 Jones Center Drive, Newton, GA, 39870, USA
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22
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Mujic AB, Durall DM, Spatafora JW, Kennedy PG. Competitive avoidance not edaphic specialization drives vertical niche partitioning among sister species of ectomycorrhizal fungi. THE NEW PHYTOLOGIST 2016; 209:1174-83. [PMID: 26391726 DOI: 10.1111/nph.13677] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2015] [Accepted: 08/20/2015] [Indexed: 05/25/2023]
Abstract
Soil depth partitioning is thought to promote the diversity of ectomycorrhizal (EM) fungal communities, but little is known about whether it is controlled by abiotic or biotic factors. In three bioassay experiments, we tested the role of vertical soil heterogeneity in determining the distributions and competitive outcomes of the EM sister species Rhizopogon vinicolor and Rhizopogon vesiculosus. We planted Pseudotsuga menziesii seedlings into soils that were either a homogenized mix of upper and lower depths or vertically stratified combinations mimicking natural field conditions. We found that both species colonized the upper or lower soil depths in the absence of competition, suggesting that their distributions were not limited by abiotic edaphic factors. In competition within homogeneous soils, R. vesiculosus completely excluded colonization by R. vinicolor, but R. vinicolor was able to persist when soils were stratified. The amount of colonization by R. vinicolor in the stratified soils was also significantly correlated with the number of multilocus genotypes present. Taken together, our findings suggest that the differential vertical distributions of R. vinicolor and R. vesiculosus in natural settings are probably attributable to competition rather than edaphic specialization, but that soil heterogeneity may play a key role in promoting EM fungal diversity.
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Affiliation(s)
- Alija B Mujic
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97330, USA
| | - Daniel M Durall
- Department of Biology, University of British Columbia Okanagan, Kelowna, BC, Canada, V1V1V7
| | - Joseph W Spatafora
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97330, USA
| | - Peter G Kennedy
- Departments of Plant Biology and Ecology, Evolution, and Behavior, University of Minnesota, St Paul, MN, 55108, USA
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23
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Ágreda T, Águeda B, Olano JM, Vicente-Serrano SM, Fernández-Toirán M. Increased evapotranspiration demand in a Mediterranean climate might cause a decline in fungal yields under global warming. GLOBAL CHANGE BIOLOGY 2015; 21:3499-3510. [PMID: 25930066 DOI: 10.1111/gcb.12960] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2015] [Accepted: 04/10/2015] [Indexed: 06/04/2023]
Abstract
Wild fungi play a critical role in forest ecosystems, and its recollection is a relevant economic activity. Understanding fungal response to climate is necessary in order to predict future fungal production in Mediterranean forests under climate change scenarios. We used a 15-year data set to model the relationship between climate and epigeous fungal abundance and productivity, for mycorrhizal and saprotrophic guilds in a Mediterranean pine forest. The obtained models were used to predict fungal productivity for the 2021-2080 period by means of regional climate change models. Simple models based on early spring temperature and summer-autumn rainfall could provide accurate estimates for fungal abundance and productivity. Models including rainfall and climatic water balance showed similar results and explanatory power for the analyzed 15-year period. However, their predictions for the 2021-2080 period diverged. Rainfall-based models predicted a maintenance of fungal yield, whereas water balance-based models predicted a steady decrease of fungal productivity under a global warming scenario. Under Mediterranean conditions fungi responded to weather conditions in two distinct periods: early spring and late summer-autumn, suggesting a bimodal pattern of growth. Saprotrophic and mycorrhizal fungi showed differences in the climatic control. Increased atmospheric evaporative demand due to global warming might lead to a drop in fungal yields during the 21st century.
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Affiliation(s)
- Teresa Ágreda
- Genius Medioambiente, C/.Campaneros 26, 42200 Almazán, Soria, Spain
- Área de Botánica, Departamento de Ciencias Agroforestales, EU de Ingenierías Agrarias, Universidad de Valladolid, Campus Duques de Soria, 42004, Soria, Spain
| | - Beatriz Águeda
- Área de Botánica, Departamento de Ciencias Agroforestales, EU de Ingenierías Agrarias, Universidad de Valladolid, Campus Duques de Soria, 42004, Soria, Spain
| | - José M Olano
- Área de Botánica, Departamento de Ciencias Agroforestales, EU de Ingenierías Agrarias, Universidad de Valladolid, Campus Duques de Soria, 42004, Soria, Spain
- Sustainable Forest Management Research Institute, Universidad de Valladolid and INIA, Avda. de Madrid 44, 34004, Palencia, Spain
| | - Sergio M Vicente-Serrano
- Instituto Pirenaico de Ecología, Consejo Superior de Investigaciones Científicas (IPE-CSIC), Avda. Montañana 1005, 50059, Zaragoza, Spain
| | - Marina Fernández-Toirán
- Departamento de Producción Vegetal y Recursos Forestales, EU de Ingenierías Agrarias, Universidad de Valladolid, Campus Duques de Soria, 42004, Soria, Spain
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24
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Morgado LN, Semenova TA, Welker JM, Walker MD, Smets E, Geml J. Summer temperature increase has distinct effects on the ectomycorrhizal fungal communities of moist tussock and dry tundra in Arctic Alaska. GLOBAL CHANGE BIOLOGY 2015; 21:959-72. [PMID: 25156129 PMCID: PMC4322476 DOI: 10.1111/gcb.12716] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2014] [Revised: 07/19/2014] [Accepted: 07/28/2014] [Indexed: 05/22/2023]
Abstract
Arctic regions are experiencing the greatest rates of climate warming on the planet and marked changes have already been observed in terrestrial arctic ecosystems. While most studies have focused on the effects of warming on arctic vegetation and nutrient cycling, little is known about how belowground communities, such as fungi root-associated, respond to warming. Here, we investigate how long-term summer warming affects ectomycorrhizal (ECM) fungal communities. We used Ion Torrent sequencing of the rDNA internal transcribed spacer 2 (ITS2) region to compare ECM fungal communities in plots with and without long-term experimental warming in both dry and moist tussock tundra. Cortinarius was the most OTU-rich genus in the moist tundra, while the most diverse genus in the dry tundra was Tomentella. On the diversity level, in the moist tundra we found significant differences in community composition, and a sharp decrease in the richness of ECM fungi due to warming. On the functional level, our results indicate that warming induces shifts in the extramatrical properties of the communities, where the species with medium-distance exploration type seem to be favored with potential implications for the mobilization of different nutrient pools in the soil. In the dry tundra, neither community richness nor community composition was significantly altered by warming, similar to what had been observed in ECM host plants. There was, however, a marginally significant increase in OTUs identified as ECM fungi with the medium-distance exploration type in the warmed plots. Linking our findings of decreasing richness with previous results of increasing ECM fungal biomass suggests that certain ECM species are favored by warming and may become more abundant, while many other species may go locally extinct due to direct or indirect effects of warming. Such compositional shifts in the community might affect nutrient cycling and soil organic C storage.
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Affiliation(s)
- Luis N Morgado
- Naturalis Biodiversity CenterP.O. Box 9517, Leiden, RA, 2300, The Netherlands
| | - Tatiana A Semenova
- Naturalis Biodiversity CenterP.O. Box 9517, Leiden, RA, 2300, The Netherlands
- Faculty of Science, Leiden UniversityP.O. Box 9502, Leiden, RA, 2300, The Netherlands
| | - Jeffrey M Welker
- Department of Biological Sciences, University of Alaska AnchorageAnchorage, USA
| | | | - Erik Smets
- Naturalis Biodiversity CenterP.O. Box 9517, Leiden, RA, 2300, The Netherlands
- Faculty of Science, Leiden UniversityP.O. Box 9502, Leiden, RA, 2300, The Netherlands
- Plant Conservation and Population Biology, KU LeuvenKasteelpark Arenberg 31, Box 2437, Leuven, 3001, Belgium
| | - József Geml
- Naturalis Biodiversity CenterP.O. Box 9517, Leiden, RA, 2300, The Netherlands
- Faculty of Science, Leiden UniversityP.O. Box 9502, Leiden, RA, 2300, The Netherlands
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25
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Mayor J, Bahram M, Henkel T, Buegger F, Pritsch K, Tedersoo L. Ectomycorrhizal impacts on plant nitrogen nutrition: emerging isotopic patterns, latitudinal variation and hidden mechanisms. Ecol Lett 2014; 18:96-107. [DOI: 10.1111/ele.12377] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2014] [Revised: 08/20/2014] [Accepted: 09/04/2014] [Indexed: 12/01/2022]
Affiliation(s)
- Jordan Mayor
- Smithsonian Tropical Research Institute; P.O. Box 0843-03092 Balboa Ancon Republic of Panama
| | - Mohammad Bahram
- Institute of Ecology and Earth Sciences; University of Tartu; 14a Ravila 50411 Tartu Estonia
| | - Terry Henkel
- Department of Biological Sciences; Humboldt State University; 1 Harpst St. Arcata CA 95521 USA
| | - Franz Buegger
- Institute of Soil Ecology; Helmholtz Zentrum München; German Research Center for Environmental Health; Ingolstaedter Landstrasße 1 D - 85764 Neuherberg Germany
| | - Karin Pritsch
- Institute of Soil Ecology; Helmholtz Zentrum München; German Research Center for Environmental Health; Ingolstaedter Landstrasße 1 D - 85764 Neuherberg Germany
| | - Leho Tedersoo
- Institute of Ecology and Earth Sciences; University of Tartu; 14a Ravila 50411 Tartu Estonia
- Natural History Museum of Tartu University; 46 Vanemuise 51005 Tartu Estonia
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26
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Hasselquist NJ, Högberg P. Dosage and duration effects of nitrogen additions on ectomycorrhizal sporocarp production and functioning: an example from two N-limited boreal forests. Ecol Evol 2014; 4:3015-26. [PMID: 25247059 PMCID: PMC4161175 DOI: 10.1002/ece3.1145] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2014] [Revised: 06/02/2014] [Accepted: 06/03/2014] [Indexed: 11/08/2022] Open
Abstract
Although it is well known that nitrogen (N) additions strongly affect ectomycorrhizal (EM) fungal community composition, less is known about how different N application rates and duration of N additions affect the functional role EM fungi play in the forest N cycle.We measured EM sporocarp abundance and species richness as well as determined the δ (15)N in EM sporocarps and tree foliage in two Pinus sylvestris forests characterized by short- and long-term N addition histories and multiple N addition treatments. After 20 and 39 years of N additions, two of the long-term N addition treatments were terminated, thereby providing a unique opportunity to examine the temporal recovery of EM sporocarps after cessation of high N loading.In general, increasing N availability significantly reduced EM sporocarp production, species richness, and the amount of N retained in EM sporocarps. However, these general responses were strongly dependent on the application rate and duration of N additions. The annual addition of 20 kg·N·ha(-1) for the past 6 years resulted in a slight increase in the production and retention of N in EM sporocarps, whereas the addition of 100 kg·N·ha(-1)·yr(-1) during the same period nearly eliminated EM sporocarps. In contrast, long-term additions of N at rates of ca. 35 or 70 kg·N·ha(-1)·yr(-1) for the past 40 years did not eliminate tree carbon allocation to EM sporocarps, although there was a decrease in the abundance and a shift in the dominant EM sporocarp taxa. Despite no immediate recovery, EM sporocarp abundance and species richness approached those of the control 20 years after terminating N additions in the most heavily fertilized treatment, suggesting a recovery of carbon allocation to EM sporocarps after cessation of high N loading.Our results provide evidence for a tight coupling between tree carbon allocation to and N retention in EM sporocarps and moreover highlight the potential use of δ (15)N in EM sporocarps as a relative index of EM fungal sink strength for N. However, nitrogen additions at high dosage rates or over long time periods appear to disrupt this feedback, which could have important ramifications on carbon and nitrogen dynamics in these forested ecosystems.
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Affiliation(s)
- Niles J Hasselquist
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences (SLU)Skogsmarksgränd, Umeå, SE-901 83, Sweden
| | - Peter Högberg
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences (SLU)Skogsmarksgränd, Umeå, SE-901 83, Sweden
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Dickie IA, Koide RT. Deep thoughts on ectomycorrhizal fungal communities. THE NEW PHYTOLOGIST 2014; 201:1083-1085. [PMID: 24491112 DOI: 10.1111/nph.12674] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Affiliation(s)
- Ian A Dickie
- Bio-Protection Research Centre, Lincoln University, Lincoln, 7640, New Zealand
| | - Roger T Koide
- Department of Biology, Brigham Young University, Provo, UT, 84602, USA
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