Relatedness defies biogeography: the tale of two island endemics (Acacia heterophylla and A. koa)

The impact of landscape and prey on psyllophagous ladybird communities in a tropical environment

This study examines the community composition and structure of psyllophagous ladybirds in a tropical environment, focusing on their interactions with psyllids as a food resource. It investigates the effects of prey availability and landscape composition on the structure of all ladybird species associated with psyllids and on the presence and abundance of species whose life cycles depend on psyllids. Sampling was conducted in Reunion island on two psyllid-infested plant species, Leucaena leucocephala and Acacia heterophylla. Ladybirds and psyllids were regularly collected during two years using a thermal aspirator, and visual inspection was conducted at eleven sites visited monthly. In this study, 16 ladybird species were identified, and only juveniles from Coccinella septempunctata, Exochomus laeviusculus, and Olla v-nigrum were frequently present, suggesting they can complete their biological cycle on psyllids. The structure of psyllophagous ladybird communities in a tropical environment is driven by the psyllid host plant and the monthly average temperature. When studied separately, food resources or landscape variables did not affect significantly the communities. The distribution of Coccinella septempunctata is limited to high elevations, where it is recognized as an aphid-eating species, mainly in its juvenile form. Conversely, at low elevation, we encountered juvenile individuals of the generalist species Exochomus laeviusculus and the specialist species Olla v-nigrum. The presence and abundance of the generalist was positively influenced by the landscape and the presence of the specialist positively by prey abundance only.

Recent fieldwork and fungarium studies double known diversity of Chlorosplenium and improve understanding of species distributions

Chlorosplenium is a small genus comprising five species of inoperculate discomycetes in the order Helotiales (Leotiomycetes) often recognizable by their bright yellowish-green colors and gregarious growth on wood. In this study, we describe five new species-C. aotearoa, C. australiense, C. cusucoense, C. epimorsicum, and C. hawaiiense-based on a combination of recent fieldwork and examination of previously collected fungarium specimens. We use an integrative taxonomic approach to support the distinction of new species, incorporating morphology and DNA sequence data with biogeography. Macro- and micromorphological features of apothecia for all species and culture characteristics for four of the five new species are documented. A multilocus phylogeny based on nuc rDNA internal transcribed spacer region ITS1-5.8S-ITS2, partial large subunit nuc ribosomal DNA (28S nuc rDNA), and A-B regions of the largest subunit of RNA polymerase II (RPB1) gene is presented. Additionally, we report Chlorosplenium chlora from Europe for the first time and expand our knowledge of the diversity and distributions of species in this genus in America, Australia, and New Zealand.

The alignment of projects dealing with wetland restoration and alien control: A challenge for conservation management in South Africa

An inventory of wetland vegetation across the country generated a list of the most common invasive alien plants across South Africa. Many of the plants on that list do not correspond with the priorities in the programmes for alien control across the country, as they are not listed on a government produced list that guides the priorities for alien control. We explore the reasons for this situation. We argue that because wetlands are such important parts of the landscape, invasive aliens in wetlands are of special concern, and there should be more alignment between alien control programmes and wetland rehabilitation programmes. This alignment starts by considering the full number of species that form a threat to wetland habitats, but also considers which pesticides to use, erosion and recolonisation in wetlands, planting indigenous vegetation after aliens have been removed, and strategising by working from upstream to downstream. Existing alien control programmes for specific grasses (some relatively new to the country and in the phase of early detection) and floating aquatic plants may guide how to tackle the invasions of grasses and forbs that have been established in South African wetlands for an extended period of time.

Intraspecific Variation Along an Elevational Gradient Alters Seed Scarification Responses in the Polymorphic Tree Species Acacia koa

Physical dormancy in seeds can challenge restoration efforts where scarification conditions for optimal germination and seedling vigor are unknown. For species that occur along wide environmental gradients, optimal scarification conditions may also differ by seed source. We examined intraspecific variation in optimal scarification conditions for germination and seedling performance in koa (Acacia koa), which occurs across a wide range of environmental conditions. To evaluate scarification responses, we recorded imbibition percentage, germination percentage, germination time, seedling abnormalities, early mortality, seedling growth, and seedling survivorship. From these, we developed a scarification index (SI) that integrates these measures simultaneously. We hypothesized that seeds from lower elevation sources exposed to higher temperatures would have harder seed coats and would require more intense scarification treatments. To test this hypothesis, we repeatedly exposed seeds to hot water differing in temperature and time until seeds imbibed. Supporting the hypothesis, seeds from lower elevation sources generally required more intense scarification, although we found substantial variation among sources. Koa seeds germinated in about a week following imbibition. Boiling seeds (i.e., maintaining at 100°C) was effective for imbibing seeds but it also substantially reduced germination percentages. Repeated exposure to 90 to 100°C water did not reduce germination percentage but decreased seedling performance and increased early mortality. No seeds remained unimbibed after six attempts of boiling germinated whereas seeds remaining unimbibed after 15 attempts of exposure to 90 to 100°C water showed high germination percentages. Abnormalities in seedling development were rare but increased with treatment intensity. Exposure to 100°C water for 1 min overall generated the best SI values but the best treatment differed by elevation, and the treatment with the best SI was rarely predicted from the highest germination percentages. Seeds that imbibed without any treatment germinated at the same level as manually filed seeds but produced poor seedling quality. Variation in mother tree environments along an elevational gradient can lead to differences in seed coat characteristics, which may explain differing responses to treatments. Scarification treatments affected processes beyond imbibition and germination and using an index like SI may improve efficiency by identifying optimal scarification treatments while reducing seed waste.

Botryosphaeriaceae associated with Acacia heterophylla (La Réunion) and Acacia koa (Hawaii)

Acacia koa and A. heterophylla are commonly occurring native trees on the Hawaiian Islands and La Réunion, respectively. A recent phylogenetic study suggested that A. heterophylla renders A. koa paraphyletic, and that the former likely arose from the Hawaiian Islands around 1.4 million years ago. An intriguing question is whether their microbiota is similar, although they occur naturally in two very distant geographical locations. In this study, we compared the fungi in the Botryosphaeriaceae isolated from natural populations of A. koa and A. heterophylla. These fungi were chosen because they commonly occur on woody plants and some are important pathogens. They are also known to have been moved globally on asymptomatic plant materials. Isolates were identified based on comparisons of DNA sequence data for the rDNA-ITS, TEF1-α and β-tubulin loci. Ten Botryosphaeriaceae species were identified, of which four species were specific to A. koa from the Hawaiian Islands and five to A. heterophylla in La Réunion. Only one species, Neofusicoccumparvum, which is known to have a wide global distribution, was common to both hosts. The overall results of this study suggest that although A. koa and A.heterophylla share a recent evolutionary history, they have established independent microbiota, at least in terms of the Botryosphaeriaceae.

Genetic analysis suggests extensive gene flow within and between catchments in a common and ecologically significant dryland river shrub species; Duma florulenta (Polygonaceae)

AIM

The conservation of plant species biodiversity has been identified as a crucial factor for the resilience of dryland ecosystems in the face of climate change and desertification. Duma florulenta (lignum) is a keystone species that facilitates biodiversity in the floodplains and wetlands of Australia's dryland river systems. This paper explores spatial genetic structure of lignum and investigates factors influencing dispersal and gene flow within and among river catchments of the northern Murray-Darling Basin.

LOCATION

Northern Murray-Darling Basin, eastern Australia.

METHODS

A total of 122 individual plants from subpopulations located on rivers in four adjacent catchments were genotyped using 10 microsatellite markers. Microsatellite data were then analyzed using population genetic techniques to evaluate levels of gene flow and genetic structure and identify factors influencing dispersal.

RESULTS

Results suggest high levels of gene flow between lignum subpopulations of the northern Murray-Darling Basin. AMOVA revealed small but significant differences between subpopulations, and STRUCTURE analysis did not detect meaningful structure when sampling information was not provided. However, when sampling information was supplied using the LOCPRIOR model, three genetic clusters were identified. All Lower Balonne subpopulations were assigned to cluster 1 while a number of the other subpopulations showed mixed ancestry. Weak relationships were identified between pairwise genetic distance and geographic as well as river distance, although the R 2 value of the former was only half that of the latter.

MAIN CONCLUSIONS

Patterns of genetic variation suggest frequent long-distance overland gene flow largely as a result of the movement of seeds via floodwater. Therefore, maintenance of natural variability in flow regime is key both to maintain conditions favorable to recruitment and to promote dispersal and gene flow across the landscape. However, given future climate change projections persistence may be more reliant on the species ability to endure long periods of drought between flood events.

Ancestral range reconstruction of remote oceanic island species of Plantago (Plantaginaceae) reveals differing scales and modes of dispersal

AIM

The aim of this study was to resolve the phylogenetic placement of island taxa, reconstruct ancestral origins and resolve competing hypotheses of dispersal patterns and biogeographical histories for oceanic island endemic taxa within subgenus Plantago (Plantaginaceae).

LOCATION

Juan Fernández Islands, the Auckland Islands, Lord Howe Island, New Amsterdam Island, New Zealand, Tasmania, Falkland Islands, Rapa Iti and the Hawaiian Islands.

TAXON

Island endemics within Plantago (Plantaginaceae), a globally distributed taxonomic group comprising approximately 250 species.

METHODS

We use Bayesian phylogenetic and divergence time analyses and historical biogeographical analysis of molecular sequence data to infer the ancestral origins of the oceanic island species in Plantago.

RESULTS

Taxa within subgenus Plantago form clades based on geographic proximities and challenge previous phylogenetic relationships and classification based on morphology. We infer that biogeographic histories of oceanic island taxa from multiple islands were shaped by dispersal at different scales and possibly by different types of birds. The highly remote Hawaiian Islands and Rapa Iti were colonized from North American taxa in a pattern corresponding to known migration routes of large marine birds, rather than from New Zealand as previously hypothesized. The island endemics of Juan Fernández, the Falkland Islands, Lord Howe, Auckland Islands and New Zealand are found to have sources in the nearest continental areas. The analyses confirm recent speciation within subgenus Plantago - which is particularly heightened in island lineages in Hawaii and Rapa Iti - but show slightly older divergence times than previous molecular dating studies.

MAIN CONCLUSIONS

Using molecular data to infer ancestral ranges for plants with uncertain taxonomic relationships can greatly improve our understanding of biogeographical histories and help elucidate origins, dispersal modes and routes in widespread lineages with complex distribution patterns such as Plantago. We improve understanding of important floristic exchange areas between continents and islands as a result of long-distance dispersal. We infer that a combination of both stepping stone dispersal and extreme long-distance dispersal can shape insular floras, and that multiple floristic areas can be the sources of closely related island taxa. However, despite the successful dispersal of Plantago, radiation in island archipelagos is generally limited suggesting specific traits may limit diversification.

Vagrant birds as a dispersal vector in transoceanic range expansion of vascular plants

Birds are thought to be important vectors underlying the disjunct distribution patterns of some terrestrial biota. Here, we investigate the role of birds in the colonisation by Ochetophila trinervis (Rhamnaceae), a vascular plant from the southern Andes, of sub-Antarctic Marion Island. The location of O. trinervis on the island far from human activities, in combination with a reconstruction of island visitors' travel history, precludes an anthropogenic introduction. Notably, three bird species occurring in the southern Andes inland have been observed as vagrants on Marion Island, with the barn swallow Hirundo rustica as the most common one. This vagrant displays long-distance migratory behaviour, eats seeds when insects are in short supply, and has started breeding in South America since the 1980s. Since naturalised O. trinervis has never been found outside the southern Andes and its diaspores are incapable of surviving in seawater or dispersing by wind, a natural avian dispersal event from the Andes to Marion Island, a distance of >7500 km, remains the only probable explanation. Although one self-incompatible shrub seems doomed to remain solitary, its mere establishment on a Southern Ocean island demonstrates the potential of vagrancy as a driver of extreme long-distance dispersal of terrestrial biota.

Even well-studied groups of alien species might be poorly inventoried: Australian Acacia species in South Africa as a case study

Understanding the status and extent of spread of alien plants is crucial for effective management. We explore this issue using Australian Acacia species (wattles) in South Africa (a global hotspot for wattle introductions and tree invasions). The last detailed inventory of wattles in South Africa was based on data collated forty years ago. This paper aimed to determine: 1) how many Australian Acacia species have been introduced to South Africa; 2) which species are still present; and 3) the status of naturalised taxa that might be viable targets for eradication. All herbaria in South Africa with specimens of introduced Australian Acacia species were visited and locality records were compared with records from literature sources, various databases, and expert knowledge. For taxa not already known to be widespread invaders, field surveys were conducted to determine whether plants are still present, and detailed surveys were undertaken of all naturalised populations. To confirm the putative identities of the naturalised taxa, we also sequenced one nuclear and one chloroplast gene. We found evidence that 141 Australian Acacia species have been introduced to South Africa (approximately double the estimate from previous work), but we could only confirm the current presence of 33 species. Fifteen wattle species are invasive (13 are in category E and two in category D2 in the Unified Framework for Biological Invasions); five have naturalised (C3); and 13 are present but there was no evidence that they had produced reproductive offspring (B2 or C1). DNA barcoding provided strong support for only 23 taxa (including two species not previously recorded from South Africa), the current name ascribed was not supported for three species and, for a further three species, there was no voucher specimen on GenBank against which their identity could be checked. Given the omissions and errors found during this systematic re-evaluation of historical records, it is clear that analyses of the type conducted here are crucial if the status of even well-studied groups of alien taxa is to be accurately determined.

Inferring spatial patterns and drivers of population divergence of Neolitsea sericea (Lauraceae), based on molecular phylogeography and landscape genomics

The relative roles of geography, climate and ecology in driving population divergence and (incipient) speciation has so far been largely neglected in studies addressing the evolution of East Asia's island flora. Here, we employed chloroplast and ribosomal DNA sequences and restriction site-associated DNA sequencing (RADseq) loci to investigate the phylogeography and drivers of population divergence of Neolitsea sericea. These data sets support the subdivision of N. sericea populations into the Southern and Northern lineages across the 'Tokara gap'. Two distinct sublineages were further identified for the Northern lineage of N. sericea from the RADseq data. RADseq was also used along with approximate Bayesian computation to show that the current distribution and differentiation of N. sericea populations resulted from a combination of relatively ancient migration and successive vicariant events that likely occurred during the mid to late Pleistocene. Landscape genomic analyses showed that, apart from geographic barriers, barrier, potentially local adaptation to different climatic conditions appears to be one of the major drivers for lineage diversification of N. sericea.

High diversity, high insular endemism and recent origin in the lichen genus Sticta (lichenized Ascomycota, Peltigerales) in Madagascar and the Mascarenes

Lichen biodiversity and its generative evolutionary processes are practically unknown in the MIOI (Madagascar and Indian Ocean Islands) biodiversity hotspot. We sought to test the hypothesis that lichenized fungi in this region have undergone a rapid radiation, following a single colonization event, giving rise to narrow endemics, as is characteristic of other lineages of plants. We extensively sampled specimens of the lichen genus Sticta in the Mascarene archipelago (mainly Réunion) and in Madagascar, mainly in the northern range (Amber Mt and Marojejy Mt) and produced the fungal ITS barcode sequence for 148 thalli. We further produced a four-loci data matrix for 68 of them, representing the diversity and geographical distribution of ITS haplotypes. We reconstructed the phylogenetic relationships within this group, established species boundaries with morphological context, and estimated the date of the most recent common ancestor. Our inferences resolve a robust clade comprising 31 endemic species of Sticta that arose from the diversification following a single recent (c. 11 Mya) colonization event. All but three species have a very restricted range, endemic to either the Mascarene archipelago or a single massif in Madagascar. The first genus of lichens to be studied with molecular data in this region underwent a recent radiation, exhibits micro-endemism, and thus exemplifies the biodiversity characteristics found in other taxa in Madagascar and the Mascarenes.

Genetic diversity and differentiation among insular honey bee populations in the southwest Indian Ocean likely reflect old geographical isolation and modern introductions

With globalization the Western honey bee has become a nearly cosmopolitan species, but it was originally restricted to the Old World. This renowned model of biodiversity has diverged into five evolutionary lineages and several geographic “subspecies.” If Apis mellifera unicolor is indubitably an African subspecies endemic to Madagascar, its relationship with honey bees from three archipelagos in the southwest Indian Ocean (SWIO) hotspot of biodiversity is misunderstood. We compared recent mtDNA diversity data to an original characterization of the nuclear diversity from honey bees in the Mascarenes and Comoros archipelagos, using 14 microsatellites, but also additional mtDNA tRNA^Leu-cox2 analysis. Our sampling offers the most comprehensive dataset for the SWIO populations with a total of 3,270 colonies from 10 islands compared with 855 samples from Madagascar, 113 from Africa, and 138 from Europe. Comprehensive mitochondrial screening confirmed that honey bees from La Réunion, Mauritius, and Comoros archipelagos are mainly of African origin (88.1% out of 2,746 colonies) and that coexistence with European lineages occurs only in the Mascarenes. PCA, Bayesian, and genetic differentiation analysis showed that African colonies are not significantly distinct on each island, but have diversified among islands and archipelagos. F_ST levels progressively decreased in significance from European and African continental populations, to SWIO insular and continental populations, and finally among islands from the same archipelago. Among African populations, Madagascar shared a nuclear background with and was most closely related to SWIO island populations (except Rodrigues). Only Mauritius Island presented clear cytoplasmic disequilibrium and genetic structure characteristic of an admixed population undergoing hybridization, in this case, between A. m. unicolor and A. m. ligustica, A. m. carnica and A. m. mellifera-like individuals. Finally, global genetic clustering analysis helped to better depict the colonization and introduction pattern of honey bee populations in these archipelagos.

Applying landscape genomic tools to forest management and restoration of Hawaiian koa (Acacia koa) in a changing environment

Identifying and quantifying the importance of environmental variables in structuring population genetic variation can help inform management decisions for conservation, restoration, or reforestation purposes, in both current and future environmental conditions. Landscape genomics offers a powerful approach for understanding the environmental factors that currently associate with genetic variation, and given those associations, where populations may be most vulnerable under future environmental change. Here, we applied genotyping by sequencing to generate over 11,000 single nucleotide polymorphisms from 311 trees and then used nonlinear, multivariate environmental association methods to examine spatial genetic structure and its association with environmental variation in an ecologically and economically important tree species endemic to Hawaii, Acacia koa. Admixture and principal components analyses showed that trees from different islands are genetically distinct in general, with the exception of some genotypes that match other islands, likely as the result of recent translocations. Gradient forest and generalized dissimilarity models both revealed a strong association between genetic structure and mean annual rainfall. Utilizing a model for projected future climate on the island of Hawaii, we show that predicted changes in rainfall patterns may result in genetic offset, such that trees no longer may be genetically matched to their environment. These findings indicate that knowledge of current and future rainfall gradients can provide valuable information for the conservation of existing populations and also help refine seed transfer guidelines for reforestation or replanting of koa throughout the state.

Chance long-distance or human-mediated dispersal? How Acacia s.l. farnesiana attained its pan-tropical distribution

Acacia s.l. farnesiana, which originates from Mesoamerica, is the most widely distributed Acacia s.l. species across the tropics. It is assumed that the plant was transferred across the Atlantic to southern Europe by Spanish explorers, and then spread across the Old World tropics through a combination of chance long-distance and human-mediated dispersal. Our study uses genetic analysis and information from historical sources to test the relative roles of chance and human-mediated dispersal in its distribution. The results confirm the Mesoamerican origins of the plant and show three patterns of human-mediated dispersal. Samples from Spain showed greater genetic diversity than those from other Old World tropics, suggesting more instances of transatlantic introductions from the Americas to that country than to other parts of Africa and Asia. Individuals from the Philippines matched a population from South Central Mexico and were likely to have been direct, trans-Pacific introductions. Australian samples were genetically unique, indicating that the arrival of the species in the continent was independent of these European colonial activities. This suggests the possibility of pre-European human-mediated dispersal across the Pacific Ocean. These significant findings raise new questions for biogeographic studies that assume chance or transoceanic dispersal for disjunct plant distributions.

Overseas seed dispersal by migratory birds

Long-distance dispersal (LDD) promotes the colonization of isolated and remote habitats, and thus it has been proposed as a mechanism for explaining the distributions of many species. Birds are key LDD vectors for many sessile organisms such as plants, yet LDD beyond local and regional scales has never been directly observed nor quantified. By sampling birds caught while in migratory flight by GPS-tracked wild falcons, we show that migratory birds transport seeds over hundreds of kilometres and mediate dispersal from mainland to oceanic islands. Up to 1.2% of birds that reached a small island of the Canary Archipelago (Alegranza) during their migration from Europe to Sub-Saharan Africa carried seeds in their guts. The billions of birds making seasonal migrations each year may then transport millions of seeds. None of the plant species transported by the birds occurs in Alegranza and most do not occur on nearby Canary Islands, providing a direct example of the importance of environmental filters in hampering successful colonization by immigrant species. The constant propagule pressure generated by these LDD events might, nevertheless, explain the colonization of some islands. Hence, migratory birds can mediate rapid range expansion or shifts of many plant taxa and determine their distribution.

Migratory Birds as Global Dispersal Vectors

Propagule dispersal beyond local scales has been considered rare and unpredictable. However, for many plants, invertebrates, and microbes dispersed by birds, long-distance dispersal (LDD) might be regularly achieved when mediated by migratory movements. Because LDD operates over spatial extents spanning hundreds to thousands of kilometers, it can promote rapid range shifts and determine species distributions. We review evidence supporting this widespread LDD service and propose a conceptual framework for estimating LDD by migratory birds. Although further research and validation efforts are still needed, we show that current knowledge can be used to make more realistic estimations of LDD mediated by regular bird migrations, thus refining current predictions of its ecological and evolutionary consequences.

Global patterns and drivers of phylogenetic structure in island floras

Islands are ideal for investigating processes that shape species assemblages because they are isolated and have discrete boundaries. Quantifying phylogenetic assemblage structure allows inferences about these processes, in particular dispersal, environmental filtering and in-situ speciation. Here, we link phylogenetic assemblage structure to island characteristics across 393 islands worldwide and 37,041 vascular plant species (representing angiosperms overall, palms and ferns). Physical and bioclimatic factors, especially those impeding colonization and promoting speciation, explained more variation in phylogenetic structure of angiosperms overall (49%) and palms (52%) than of ferns (18%). The relationships showed different or contrasting trends among these major plant groups, consistent with their dispersal- and speciation-related traits and climatic adaptations. Phylogenetic diversity was negatively related to isolation for palms, but unexpectedly it was positively related to isolation for angiosperms overall. This indicates strong dispersal filtering for the predominantly large-seeded, animal-dispersed palm family whereas colonization from biogeographically distinct source pools on remote islands likely drives the phylogenetic structure of angiosperm floras. We show that signatures of dispersal limitation, environmental filtering and in-situ speciation differ markedly among taxonomic groups on islands, which sheds light on the origin of insular plant diversity.