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Szejner P, Tang Y, Angove C, Schiestl-Aalto P, Sahlstedt E, Young G, Nelson DB, Kahmen A, Saurer M, Rinne-Garmston KT. Opposing seasonal trends in source water and sugar dampen intra-annual variability in tree rings oxygen isotopes. THE NEW PHYTOLOGIST 2025. [PMID: 40391701 DOI: 10.1111/nph.70223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2025] [Accepted: 04/18/2025] [Indexed: 05/22/2025]
Abstract
Variations of oxygen isotopes δ18O in tree rings provide critical insights into past climate and tree physiological processes, yet the mechanisms shaping the intra-annual δ18O signals remain incompletely understood. To address this gap, we investigated how seasonal changes in source water, leaf water, and sugars influence δ18O recorded along the tree rings of Pinus sylvestris in Finland. We conducted a seasonal analysis measuring δ18O from needle water, source water, and phloem sugars and investigated the fraction of oxygen isotope exchange during wood formation. We found that seasonal δ18O amplitudes are significantly reduced from leaf water to tree rings, driven by opposing seasonal patterns in increasing source water δ18O and decreasing evaporative enrichment as relative humidity increases. Additionally, the isotope exchange between source water and phloem sugars further dampens seasonal δ18O signals in the rings. Our findings show that oxygen isotope exchange is critical in shaping δ18O signals, influencing the role of source water and relative humidity recorded on intra-annual resolution. This refined understanding helps interpret tree physiological responses under changing conditions and improves climate reconstructions based on tree rings using intra-annual resolution.
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Affiliation(s)
- Paul Szejner
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Latokartanonkaari 9, FI-00790, Helsinki, Finland
| | - Yu Tang
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Latokartanonkaari 9, FI-00790, Helsinki, Finland
- College of Urban and Environmental Sciences, Peking University, Beijing, 100871, China
| | - Charlotte Angove
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Latokartanonkaari 9, FI-00790, Helsinki, Finland
| | - Pauliina Schiestl-Aalto
- Institute for Atmospheric and Earth System Research (INAR)/Physics, Faculty of Science, University of Helsinki, PO Box 68, FI-00014, Helsinki, Finland
| | - Elina Sahlstedt
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Latokartanonkaari 9, FI-00790, Helsinki, Finland
| | - Giles Young
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Latokartanonkaari 9, FI-00790, Helsinki, Finland
| | - Daniel B Nelson
- Department of Environmental Sciences - Botany, University of Basel, 4056, Basel, Switzerland
| | - Ansgar Kahmen
- Department of Environmental Sciences - Botany, University of Basel, 4056, Basel, Switzerland
| | - Matthias Saurer
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, 8903, Birmensdorf, Switzerland
| | - Katja T Rinne-Garmston
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Latokartanonkaari 9, FI-00790, Helsinki, Finland
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2
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Bailey K, Szejner P, Strange B, Nabours R, Monson RK, Hu J. The aridity influence on oxygen isotopes recorded in tree rings. TREE PHYSIOLOGY 2025; 45:tpaf044. [PMID: 40192226 DOI: 10.1093/treephys/tpaf044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2024] [Accepted: 03/22/2025] [Indexed: 05/15/2025]
Abstract
The stable isotopes of oxygen in wood cellulose (δ18Ocell) have been widely used to reconstruct historical source water use in trees or changes in atmospheric humidity. However, in many cases, the δ18O of source water use is assumed to reflect that of precipitation, which is often not the case in semi-arid to arid ecosystems where trees use deeper and older water from previous precipitation events (or even groundwater). Furthermore, the degree to which δ18Ocell reflects source water and atmospheric aridity depends on pex, normally defined as the proportion of oxygen atoms that exchange between isotopically enriched carbohydrates from the leaf and unenriched xylem water during cellulose synthesis. Many studies treat pex as a constant. However, pex can only be estimated with direct measurements of δ18Ocell and the δ18O of tree source water and sucrose. Additionally, other physiological mechanisms (e.g., photosynthate translocation) can alter the isotopic signal before cellulose is produced. Thus, determining this 'apparent pex' (apex; which includes those other physiological mechanisms such as photosynthate translocation plus the exchange of oxygen atoms during cellulose synthesis), can be difficult. In this study, we collected δ18O of xylem water and δ18O of wood cellulose from seven stands of Ponderosa pine situated at the northern boundary of the North American Monsoon (NAM) climate system to assess how potential variability in apex influenced how source water and aridity were recorded in δ18Ocell. We compared measured and modeled values of δ18Ocell and found that more arid sites under-represented the vapor pressure deficit (VPD) signal in cellulose while wetter sites over-represented the VPD signal in cellulose. We also found that apex varied as a function of site aridity, where low precipitation and high VPD led to high apex, while high precipitation and low VPD led to low apex. Future studies can use our emerging understanding of the aridity-apex relationship in different portions of the annual ring to better disentangle the source water and VPD signals in cellulose, particularly for regions such as the NAM region.
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Affiliation(s)
- Kinzie Bailey
- School of Natural Resources and the Environment, University of Arizona, 1064 East Lowell Street, Tucson, AZ 85721, USA
- Laboratory of Tree Ring Research, University of Arizona, 1215 East Lowell Street, Tucson, AZ 85721, USA
- Northern Prairie Wildlife Research Center, US Geological Survey, 820 Columbus Street, Rapid City, SD 57701, USA
| | - Paul Szejner
- Bioeconomy and Environment Unit, Natural Resources Institute Finland, Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Brandon Strange
- School of Natural Resources and the Environment, University of Arizona, 1064 East Lowell Street, Tucson, AZ 85721, USA
- Laboratory of Tree Ring Research, University of Arizona, 1215 East Lowell Street, Tucson, AZ 85721, USA
- School of Informatics, Norther Arizona University, 1295 Knoles Drive, Flagstaff, AZ 86011, USA
| | - Rhiannon Nabours
- School of Natural Resources and the Environment, University of Arizona, 1064 East Lowell Street, Tucson, AZ 85721, USA
| | - Russell K Monson
- Laboratory of Tree Ring Research, University of Arizona, 1215 East Lowell Street, Tucson, AZ 85721, USA
- Department of Evolutionary Biology, University of Arizona, 1041 East Lowell Street, Tucson, AZ 85721, USA
| | - Jia Hu
- School of Natural Resources and the Environment, University of Arizona, 1064 East Lowell Street, Tucson, AZ 85721, USA
- Laboratory of Tree Ring Research, University of Arizona, 1215 East Lowell Street, Tucson, AZ 85721, USA
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Angove C, Wiesenberg GLB, Lehmann MM, Saurer M, Tang Y, Sahlstedt E, Speckert TC, Schiestl‐Aalto PP, Rinne‐Garmston KT. Time-integrated δ 2H in n-alkanes and carbohydrates from boreal needles reveal intra-annual physiological and environmental signals. THE NEW PHYTOLOGIST 2025; 246:498-514. [PMID: 39981661 PMCID: PMC11923416 DOI: 10.1111/nph.20448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2024] [Accepted: 12/19/2024] [Indexed: 02/22/2025]
Abstract
Reliable insights from key δ2H bioindicators, n-alkanes and carbohydrates, are hindered by our limited understanding of isotope fractionation processes related to leaf water and primary assimilates. We addressed this with the first study to investigate time-integrated intra-annual δ2H signals of n-alkanes and carbohydrates in a natural forest. We sampled 1-yr-old needles (1N) and current-year needles (0N) from five Scots Pine trees in a coniferous forest in Hyytiälä, Finland, biweekly during 2019. The δ2H of their n-alkanes (δ2Halkane), water-soluble carbohydrates (δ2HWSC) and starch (δ2Hstarch) were evaluated for time-integrated physiological (gas-exchange) and environmental (hydrological) signals. Time integration was critical for interpreting δ2HWSC and δ2Halkane. Time-integrated net assimilation rate (T:An), the strongest signal in δ2HWSC, correlated negatively with 1N δ2HWSC (early season) and positively with 0N δ2HWSC (late season). Unexpectedly, δ2Halkane exhibited stronger environmental signals in 1N than in 0N, with the most pronounced being physiologically mediated hydrological signals. T:An is a major signal in intra-annual δ2HWSC in a boreal forest, subject to seasonal interactions with needle age and δ2Hstarch. There could be enough de novo n-alkane synthesis in situ to enhance the reliability of δ2Halkane as a hydrological indicator, bringing promise to interpretations of the n-alkane palaeohydrological record.
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Affiliation(s)
- Charlotte Angove
- Stable Isotope Laboratory of Luke (SILL)Natural Resources Institute Finland (Luke)Helsinki00790Finland
- University of HelsinkiHelsinki00790Finland
| | | | - Marco M. Lehmann
- Forest Soils and Biogeochemistry, Swiss Federal Institute for ForestSnow and Landscape Research (WSL)Birmensdorf8903Switzerland
| | - Matthias Saurer
- Forest Soils and Biogeochemistry, Swiss Federal Institute for ForestSnow and Landscape Research (WSL)Birmensdorf8903Switzerland
| | - Yu Tang
- College of Urban and Environmental SciencesPeking UniversityBeijing100871China
| | - Elina Sahlstedt
- Stable Isotope Laboratory of Luke (SILL)Natural Resources Institute Finland (Luke)Helsinki00790Finland
| | | | - Pauliina P. Schiestl‐Aalto
- Faculty of Science, Institute for Atmospheric and Earth System Research (INAR)/PhysicsUniversity of HelsinkiHelsinki00014Finland
| | - Katja T. Rinne‐Garmston
- Stable Isotope Laboratory of Luke (SILL)Natural Resources Institute Finland (Luke)Helsinki00790Finland
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4
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Tang Y, Sahlstedt E, Rissanen K, Bäck J, Schiestl-Aalto P, Angove C, Richter A, Saurer M, Aalto J, Dukat P, Lintunen A, Rinne-Garmston KT. Resin acid δ 13C and δ 18O as indicators of intra-seasonal physiological and environmental variability. PLANT, CELL & ENVIRONMENT 2024; 47:5411-5423. [PMID: 39189985 DOI: 10.1111/pce.15108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 07/31/2024] [Accepted: 08/11/2024] [Indexed: 08/28/2024]
Abstract
Understanding the dynamics of δ13C and δ18O in modern resin is crucial for interpreting (sub)fossilized resin records and resin production dynamics. We measured the δ13C and δ18O offsets between resin acids and their precursor molecules in the top-canopy twigs and breast-height stems of mature Pinus sylvestris trees. We also investigated the physiological and environmental signals imprinted in resin δ13C and δ18O at an intra-seasonal scale. Resin δ13C was c. 2‰ lower than sucrose δ13C, in both twigs and stems, likely due to the loss of 13C-enriched C-1 atoms of pyruvate during isoprene formation and kinetic isotope effects during diterpene synthesis. Resin δ18O was c. 20‰ higher than xylem water δ18O and c. 20‰ lower than δ18O of water-soluble carbohydrates, possibly caused by discrimination against 18O during O2-based diterpene oxidation and 35%-50% oxygen atom exchange with water. Resin δ13C and δ18O recorded a strong signal of soil water potential; however, their overall capacity to infer intraseasonal environmental changes was limited by their temporal, within-tree and among-tree variations. Future studies should validate the potential isotope fractionation mechanisms associated with resin synthesis and explore the use of resin δ13C and δ18O as a long-term proxy for physiological and environmental changes.
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Affiliation(s)
- Yu Tang
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Helsinki, Finland
- College of Urban and Environmental Sciences, Peking University, Beijing, China
| | - Elina Sahlstedt
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Helsinki, Finland
| | - Kaisa Rissanen
- Département des Sciences Biologiques, Centre for Forest Research, Université du Québec à Montréal, Montréal, Québec, Canada
| | - Jaana Bäck
- Institute for Atmospheric and Earth System Research (INAR)/Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, Helsinki, Finland
| | - Pauliina Schiestl-Aalto
- Institute for Atmospheric and Earth System Research (INAR)/Physics, Faculty of Science, University of Helsinki, Helsinki, Finland
| | - Charlotte Angove
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Helsinki, Finland
| | - Andreas Richter
- Centre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria
| | - Matthias Saurer
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Birmensdorf, Switzerland
| | - Juho Aalto
- Institute for Atmospheric and Earth System Research (INAR)/Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, Helsinki, Finland
| | - Paulina Dukat
- Institute for Atmospheric and Earth System Research (INAR)/Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, Helsinki, Finland
| | - Anna Lintunen
- Institute for Atmospheric and Earth System Research (INAR)/Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, Helsinki, Finland
- Institute for Atmospheric and Earth System Research (INAR)/Physics, Faculty of Science, University of Helsinki, Helsinki, Finland
| | - Katja T Rinne-Garmston
- Stable Isotope Laboratory of Luke (SILL), Natural Resources Institute Finland (Luke), Helsinki, Finland
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5
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Yu YZ, Ma WT, Wang X, Tcherkez G, Schnyder H, Gong XY. Reconciling water-use efficiency estimates from carbon isotope discrimination of leaf biomass and tree rings: nonphotosynthetic fractionation matters. THE NEW PHYTOLOGIST 2024; 244:2225-2238. [PMID: 39360441 DOI: 10.1111/nph.20170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Accepted: 09/16/2024] [Indexed: 10/04/2024]
Abstract
Carbon isotope discrimination (∆) in leaf biomass (∆BL) and tree rings (∆TR) provides important proxies for plant responses to climate change, specifically in terms of intrinsic water-use efficiency (iWUE). However, the nonphotosynthetic 12C/13C fractionation in plant tissues has rarely been quantified and its influence on iWUE estimation remains uncertain. We derived a comprehensive, ∆ based iWUE model (iWUEcom) which includes nonphotosynthetic fractionations (d) and characterized tissue-specific d-values based on global compilations of data of ∆BL, ∆TR and real-time ∆ in leaf photosynthesis (∆online). iWUEcom was further validated with independent datasets. ∆BL was larger than ∆online by 2.53‰, while ∆BL and ∆TR showed a mean offset of 2.76‰, indicating that ∆TR is quantitatively very similar to ∆online. Applying the tissue-specific d-values (dBL = 2.5‰, dTR = 0‰), iWUE estimated from ∆BL aligned well with those estimated from ∆TR or gas exchange. ∆BL and ∆TR showed a consistent iWUE trend with an average CO2 sensitivity of 0.15 ppm ppm-1 during 1975-2015. Accounting for nonphotosynthetic fractionations improves the estimation of iWUE based on isotope records in leaf biomass and tree rings, which is ultimate for inferring changes in carbon and water cycles under historical and future climate.
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Affiliation(s)
- Yong Zhi Yu
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, College of Geographical Sciences, Fujian Normal University, Fuzhou, 350007, China
| | - Wei Ting Ma
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, College of Geographical Sciences, Fujian Normal University, Fuzhou, 350007, China
| | - Xuming Wang
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, College of Geographical Sciences, Fujian Normal University, Fuzhou, 350007, China
| | - Guillaume Tcherkez
- Institut de Recherche en Horticulture et Semences, Université d'Angers, 42 rue Georges Morel, Beaucouzé, 49070, France
- Research School of Biology, ANU College of Sciences, Australian National University, Canberra, ACT, 2601, Australia
| | - Hans Schnyder
- Lehrstuhl für Grünlandlehre, Technische Universität München, Alte Akademie 12, Freising, 85354, Germany
| | - Xiao Ying Gong
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, College of Geographical Sciences, Fujian Normal University, Fuzhou, 350007, China
- Fujian Provincial Key Laboratory for Plant Eco-physiology, Fuzhou, 350007, China
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6
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Vitali V, Schuler P, Holloway-Phillips M, D'Odorico P, Guidi C, Klesse S, Lehmann MM, Meusburger K, Schaub M, Zweifel R, Gessler A, Saurer M. Finding balance: Tree-ring isotopes differentiate between acclimation and stress-induced imbalance in a long-term irrigation experiment. GLOBAL CHANGE BIOLOGY 2024; 30:e17237. [PMID: 38488024 DOI: 10.1111/gcb.17237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 02/05/2024] [Accepted: 02/09/2024] [Indexed: 03/19/2024]
Abstract
Scots pine (Pinus sylvestris L.) is a common European tree species, and understanding its acclimation to the rapidly changing climate through physiological, biochemical or structural adjustments is vital for predicting future growth. We investigated a long-term irrigation experiment at a naturally dry forest in Switzerland, comparing Scots pine trees that have been continuously irrigated for 17 years (irrigated) with those for which irrigation was interrupted after 10 years (stop) and non-irrigated trees (control), using tree growth, xylogenesis, wood anatomy, and carbon, oxygen and hydrogen stable isotope measurements in the water, sugars and cellulose of plant tissues. The dendrochronological analyses highlighted three distinct acclimation phases to the treatments: irrigated trees experienced (i) a significant growth increase in the first 4 years of treatment, (ii) high growth rates but with a declining trend in the following 8 years and finally (iii) a regression to pre-irrigation growth rates, suggesting the development of a new growth limitation (i.e. acclimation). The introduction of the stop treatment resulted in further growth reductions to below-control levels during the third phase. Irrigated trees showed longer growth periods and lower tree-ring δ13 C values, reflecting lower stomatal restrictions than control trees. Their strong tree-ring δ18 O and δ2 H (O-H) relationship reflected the hydrological signature similarly to the control. On the contrary, the stop trees had lower growth rates, conservative wood anatomical traits, and a weak O-H relationship, indicating a physiological imbalance. Tree vitality (identified by crown transparency) significantly modulated growth, wood anatomical traits and tree-ring δ13 C, with low-vitality trees of all treatments performing similarly regardless of water availability. We thus provide quantitative indicators for assessing physiological imbalance and tree acclimation after environmental stresses. We also show that tree vitality is crucial in shaping such responses. These findings are fundamental for the early assessment of ecosystem imbalances and decline under climate change.
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Affiliation(s)
- Valentina Vitali
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Philipp Schuler
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | | | - Petra D'Odorico
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Claudia Guidi
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Stefan Klesse
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Marco M Lehmann
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Katrin Meusburger
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Marcus Schaub
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Roman Zweifel
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Arthur Gessler
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
- Institute of Terrestrial Ecosystems, ETH Zurich, Zurich, Switzerland
| | - Matthias Saurer
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
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Tikkasalo OP, Leppä K, Launiainen S, Peltoniemi M, Mäkipää R, Rinne-Garmston KT, Sahlstedt E, Young GHF, Bokareva A, Lohila A, Korkiakoski M, Schiestl-Aalto P, Lehtonen A. Modeling the response of Norway spruce tree-ring carbon and oxygen isotopes to selection harvest on a drained peatland forest. TREE PHYSIOLOGY 2024; 44:tpad119. [PMID: 37756632 PMCID: PMC10993295 DOI: 10.1093/treephys/tpad119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 08/22/2023] [Accepted: 09/19/2023] [Indexed: 09/29/2023]
Abstract
Continuous cover forestry (CCF) has gained interest as an alternative to even-aged management particularly on drained peatland forests. However, relatively little is known about the physiological response of suppressed trees when larger trees are removed as a part of CCF practices. Consequently, studies concentrating on process-level modeling of the response of trees to selection harvesting are also rare. Here, we compared, modeled and measured harvest response of previously suppressed Norway spruce (Picea abies) trees to a selection harvest. We quantified the harvest response by collecting Norway spruce tree-ring samples in a drained peatland forest site and measuring the change in stable carbon and oxygen isotopic ratios of wood formed during 2010-20, including five post-harvest years. The measured isotopic ratios were compared with ecosystem-level process model predictions for ${\kern0em }^{13}$C discrimination and ${\kern0em }^{18}$O leaf water enrichment. We found that the model predicted similar but lower harvest response than the measurements. Furthermore, accounting for mesophyll conductance was important for capturing the variation in ${\kern0em }^{13}$C discrimination. In addition, we performed sensitivity analysis on the model, which suggests that the modeled ${\kern0em }^{13}$C discrimination is sensitive to parameters related to CO2 transport through stomata to the mesophyll.
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Affiliation(s)
- Olli-Pekka Tikkasalo
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Kersti Leppä
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Samuli Launiainen
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Mikko Peltoniemi
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Raisa Mäkipää
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Katja T Rinne-Garmston
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Elina Sahlstedt
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Giles H F Young
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Aleksandra Bokareva
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
| | - Annalea Lohila
- Finnish Meteorological Institute, P.O. Box 503, FI-00101 Helsinki, Finland
- Institute for Atmospheric and Earth System Research (INAR)/Physics, Faculty of Sciences, University of Helsinki, P.O. Box 68, FI-00014 Helsinki, Finland
| | - Mika Korkiakoski
- Finnish Meteorological Institute, P.O. Box 503, FI-00101 Helsinki, Finland
| | - Pauliina Schiestl-Aalto
- Institute for Atmospheric and Earth System Research (INAR)/Physics, Faculty of Sciences, University of Helsinki, P.O. Box 68, FI-00014 Helsinki, Finland
| | - Aleksi Lehtonen
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, FI-00790 Helsinki, Finland
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8
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Ubierna N, Holloway-Phillips MM, Wingate L, Ogée J, Busch FA, Farquhar GD. Using Carbon Stable Isotopes to Study C 3 and C 4 Photosynthesis: Models and Calculations. Methods Mol Biol 2024; 2790:163-211. [PMID: 38649572 DOI: 10.1007/978-1-0716-3790-6_10] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/25/2024]
Abstract
Stable carbon isotopes are a powerful tool to study photosynthesis. Initial applications consisted of determining isotope ratios of plant biomass using mass spectrometry. Subsequently, theoretical models relating C isotope values to gas exchange characteristics were introduced and tested against instantaneous online measurements of 13C photosynthetic discrimination. Beginning in the twenty-first century, laser absorption spectroscopes with sufficient precision for determining isotope mixing ratios became commercially available. This has allowed collection of large data sets at lower cost and with unprecedented temporal resolution. More data and accompanying knowledge have permitted refinement of 13C discrimination model equations, but often at the expense of increased model complexity and difficult parametrization. This chapter describes instantaneous online measurements of 13C photosynthetic discrimination, provides recommendations for experimental setup, and presents a thorough compilation of equations available to researchers. We update our previous 2018 version of this chapter by including recently improved descriptions of (photo)respiratory processes and associated fractionations. We discuss the capabilities and limitations of the diverse 13C discrimination model equations and provide guidance for selecting the model complexity needed for different applications.
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Affiliation(s)
- Nerea Ubierna
- Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Unité Mixte de Recherche (UMR)1391 ISPA, Villenave D'Ornon, France
| | - Meisha-Marika Holloway-Phillips
- Research Unit of Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmendsorf, Switzerland
| | - Lisa Wingate
- Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Unité Mixte de Recherche (UMR)1391 ISPA, Villenave D'Ornon, France
| | - Jérôme Ogée
- Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Unité Mixte de Recherche (UMR)1391 ISPA, Villenave D'Ornon, France
| | - Florian A Busch
- School of Biosciences and The Birmingham Institute of Forest Research, University of Birmingham, Birmingham, UK
| | - Graham D Farquhar
- Research School of Biology, Australian National University, Canberra, ACT, Australia
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9
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Salomón RL, Rodríguez-Calcerrada J, De Roo L, Miranda JC, Bodé S, Boeckx P, Steppe K. Carbon isotope composition of respired CO2 in woody stems and leafy shoots of three tree species along the growing season: physiological drivers for respiratory fractionation. TREE PHYSIOLOGY 2023; 43:1731-1744. [PMID: 37471648 DOI: 10.1093/treephys/tpad091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Revised: 07/10/2023] [Accepted: 07/17/2023] [Indexed: 07/22/2023]
Abstract
The carbon isotope composition of respired CO2 (δ13CR) and bulk organic matter (δ13CB) of various plant compartments informs about the isotopic fractionation and substrate of respiratory processes, which are crucial to advance the understanding of carbon allocation in plants. Nevertheless, the variation across organs, species and seasons remains poorly understood. Cavity Ring-Down Laser Spectroscopy was applied to measure δ13CR in leafy shoots and woody stems of maple (Acer platanoides L.), oak (Quercus robur L.) and cedar (Thuja occidentalis L.) trees during spring and late summer. Photosynthesis, respiration, growth and non-structural carbohydrates were measured in parallel to evaluate potential drivers for respiratory fractionation. The CO2 respired by maple and oak shoots was 13C-enriched relative to δ13CB during spring, but not late summer or in the stem. In cedar, δ13CR did not vary significantly throughout organs and seasons, with respired CO2 being 13C-depleted relative to δ13CB. Shoot δ13CR was positively related to leaf starch concentration in maple, while stem δ13CR was inversely related to stem growth. These relations were not significant for oak or cedar. The variability in δ13CR suggests (i) different contributions of respiratory pathways between organs and (ii) seasonality in the respiratory substrate and constitutive compounds for wood formation in deciduous species, less apparent in evergreen cedar, whose respiratory metabolism might be less variable.
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Affiliation(s)
- Roberto L Salomón
- Department of Plants and Crops, Faculty of Bioscience Engineering, Laboratory of Plant Ecology, Ghent University, Coupure links 653, Ghent 9000, Belgium
- Departamento de Sistemas y Recursos Naturales, Research Group FORESCENT, Universidad Politécnica de Madrid, Jose Antonio Novais 10, 28040, Madrid, Spain
| | - Jesús Rodríguez-Calcerrada
- Departamento de Sistemas y Recursos Naturales, Research Group FORESCENT, Universidad Politécnica de Madrid, Jose Antonio Novais 10, 28040, Madrid, Spain
| | - Linus De Roo
- Department of Plants and Crops, Faculty of Bioscience Engineering, Laboratory of Plant Ecology, Ghent University, Coupure links 653, Ghent 9000, Belgium
| | - José Carlos Miranda
- Departamento de Sistemas y Recursos Naturales, Research Group FORESCENT, Universidad Politécnica de Madrid, Jose Antonio Novais 10, 28040, Madrid, Spain
| | - Samuel Bodé
- Department of Green Chemistry and Technology, Faculty of Bioscience Engineering, Isotope Bioscience Laboratory - ISOFYS, Ghent University, Coupure links 653, Gent 9000, Belgium
| | - Pascal Boeckx
- Department of Green Chemistry and Technology, Faculty of Bioscience Engineering, Isotope Bioscience Laboratory - ISOFYS, Ghent University, Coupure links 653, Gent 9000, Belgium
| | - Kathy Steppe
- Department of Plants and Crops, Faculty of Bioscience Engineering, Laboratory of Plant Ecology, Ghent University, Coupure links 653, Ghent 9000, Belgium
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10
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Tang Y, Schiestl-Aalto P, Lehmann MM, Saurer M, Sahlstedt E, Kolari P, Leppä K, Bäck J, Rinne-Garmston KT. Estimating intra-seasonal photosynthetic discrimination and water use efficiency using δ13C of leaf sucrose in Scots pine. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:321-335. [PMID: 36255219 PMCID: PMC9786842 DOI: 10.1093/jxb/erac413] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Accepted: 10/17/2022] [Indexed: 05/31/2023]
Abstract
Sucrose has a unique role in recording environmental and physiological signals during photosynthesis in its carbon isotope composition (δ13C) and transport of the signal to tree rings. Yet, instead of sucrose, total organic matter (TOM) or water-soluble carbohydrates (WSC) are typically analysed in studies that follow δ13C signals within trees. To study how the choice of organic material may bias the interpretation of δ13C records, we used mature field-grown Scots pine (Pinus sylvestris) to compare for the first time δ13C of different leaf carbon pools with δ13C of assimilates estimated by a chamber-Picarro system (δ13CA_Picarro), and a photosynthetic discrimination model (δ13CA_model). Compared with sucrose, the other tested carbon pools, such as TOM and WSC, poorly recorded the seasonal trends or absolute values of δ13CA_Picarro and δ13CA_model. Consequently, in comparison with the other carbon pools, sucrose δ13C was superior for reconstructing changes in intrinsic water use efficiency (iWUE), agreeing in both absolute values and intra-seasonal variations with iWUE estimated from gas exchange. Thus, deriving iWUE and environmental signals from δ13C of bulk organic matter can lead to misinterpretation. Our findings underscore the advantage of using sucrose δ13C to understand plant physiological responses in depth.
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Affiliation(s)
| | - Paulina Schiestl-Aalto
- Institute for Atmospheric and Earth System Research (INAR)/Physics, Faculty of Science, University of Helsinki, P.O. Box 68, 00014, Helsinki, Finland
| | - Marco M Lehmann
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Zürcherstrasse 111, 8903, Birmensdorf, Switzerland
| | - Matthias Saurer
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Zürcherstrasse 111, 8903, Birmensdorf, Switzerland
| | - Elina Sahlstedt
- Bioeconomy and Environment Unit, Natural Resources Institute Finland (Luke), Latokartanonkaari 9, 00790, Helsinki, Finland
| | - Pasi Kolari
- Institute for Atmospheric and Earth System Research (INAR)/Physics, Faculty of Science, University of Helsinki, P.O. Box 68, 00014, Helsinki, Finland
| | - Kersti Leppä
- Bioeconomy and Environment Unit, Natural Resources Institute Finland (Luke), Latokartanonkaari 9, 00790, Helsinki, Finland
| | - Jaana Bäck
- Institute for Atmospheric and Earth System Research (INAR)/Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, P.O. Box 27, 00014, Helsinki, Finland
| | - Katja T Rinne-Garmston
- Bioeconomy and Environment Unit, Natural Resources Institute Finland (Luke), Latokartanonkaari 9, 00790, Helsinki, Finland
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11
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Palmer L, Robertson I, Lavergne A, Hemming D, Loader NJ, Young G, Davies D, Rinne‐Garmston K, Los S, Williams J. Spatio-Temporal Variations in Carbon Isotope Discrimination Predicted by the JULES Land Surface Model. JOURNAL OF GEOPHYSICAL RESEARCH. BIOGEOSCIENCES 2022; 127:e2022JG007041. [PMID: 37034424 PMCID: PMC10078459 DOI: 10.1029/2022jg007041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Revised: 11/23/2022] [Accepted: 11/28/2022] [Indexed: 06/19/2023]
Abstract
Stable carbon isotopes in plants can help evaluate and improve the representation of carbon and water cycles in land-surface models, increasing confidence in projections of vegetation response to climate change. Here, we evaluated the predictive skills of the Joint UK Land Environmental Simulator (JULES) to capture spatio-temporal variations in carbon isotope discrimination (Δ13C) reconstructed by tree rings at 12 sites in the United Kingdom over the period 1979-2016. Modeled and measured Δ13C time series were compared at each site and their relationships with local climate investigated. Modeled Δ13C time series were significantly correlated (p < 0.05) with tree-ring Δ13C at eight sites, but JULES underestimated mean Δ13C values at all sites, by up to 2.6‰. Differences in mean Δ13C may result from post-photosynthetic isotopic fractionations that were not considered in JULES. Inter-annual variability in Δ13C was also underestimated by JULES at all sites. While modeled Δ13C typically increased over time across the UK, tree-ring Δ13C values increased only at five sites located in the northern regions but decreased at the southern-most sites. Considering all sites together, JULES captured the overall influence of environmental drivers on Δ13C but failed to capture the direction of change in Δ13C caused by air temperature, atmospheric CO2 and vapor pressure deficit at some sites. Results indicate that the representation of carbon-water coupling in JULES could be improved to reproduce both the trend and magnitude of interannual variability in isotopic records, the influence of local climate on Δ13C, and to reduce uncertainties in predicting vegetation-environment interactions.
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Affiliation(s)
- Lewis Palmer
- Department of GeographySwansea UniversitySwanseaUK
- Modelling and InformaticsSoils, Crops, and WaterRSK ADAS LimitedBristolUK
| | | | - Aliénor Lavergne
- Department of Geography and Environmental ScienceUniversity of ReadingReadingUK
- Department of PhysicsImperial College LondonLondonUK
| | | | | | - Giles Young
- Natural Resources Institute Finland (Luke)HelsinkiFinland
| | | | | | - Sietse Los
- Department of GeographySwansea UniversitySwanseaUK
- Wetland Conservation UnitWildfowl and Wetland Trust (WWT)GloucestershireUK
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12
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Ubierna N, Holloway‐Phillips M, Farquhar GD. Scaling from fluxes to organic matter: interpreting 13 C isotope ratios of plant material using flux models. THE NEW PHYTOLOGIST 2022; 236:2003-2008. [PMID: 36385264 PMCID: PMC9827853 DOI: 10.1111/nph.18523] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
This article is a Commentary on Leppä et al. (2022), 236: 2044–2060.
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Affiliation(s)
- Nerea Ubierna
- Research School of BiologyThe Australian National UniversityCanberraACT2601Australia
| | | | - Graham D. Farquhar
- Research School of BiologyThe Australian National UniversityCanberraACT2601Australia
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