Empty forest or empty rivers? A century of commercial hunting in Amazonia

The Importance of Studying Infectious and Parasitic Diseases of Wild Animals in the Amazon Biome with a Focus on One Health

The Amazon Biome is home to an extraordinary diversity of wildlife, many of which are reservoirs or vectors for infectious and parasitic diseases that can impact not only the health of wild animals but also human and domestic animal populations. This narrative review highlights the critical importance of studying infectious and parasitic diseases in wild animals within the Amazon, particularly in the context of the One Health approach, which recognizes the interconnectedness of human, animal, and environmental health. This narrative review examines key pathogens, including viruses, bacteria, and parasites, that pose significant risks to wildlife conservation and public health. Through a synthesis of recent literature, this article emphasizes the need for comprehensive surveillance, research, and collaboration between the veterinary, medical, and environmental sectors. The results underscore the urgent necessity for an integrated response to emerging diseases, particularly as environmental changes and human activities increasingly disrupt ecosystems in the region. The conclusions advocate for the reinforcement of One Health initiatives in the Amazon Biome to ensure the protection of biodiversity and the prevention of zoonotic disease transmission to human populations.

Floodplain forests drive fruit-eating fish diversity at the Amazon Basin-scale

Unlike most rivers globally, nearly all lowland Amazonian rivers have unregulated flow, supporting seasonally flooded floodplain forests. Floodplain forests harbor a unique tree species assemblage adapted to flooding and specialized fauna, including fruit-eating fish that migrate seasonally into floodplains, favoring expansive floodplain areas. Frugivorous fish are forest-dependent fauna critical to forest regeneration via seed dispersal and support commercial and artisanal fisheries. We implemented linear mixed effects models to investigate drivers of species richness among specialized frugivorous fishes across the ~6,000,000 km2 Amazon Basin, analyzing 29 species from 9 families (10,058 occurrences). Floodplain predictors per subbasin included floodplain forest extent, tree species richness (309,540 occurrences for 2,506 species), water biogeochemistry, flood duration, and elevation, with river order controlling for longitudinal positioning along the river network. We observed heterogeneous patterns of frugivorous fish species richness, which were positively correlated with floodplain forest extent, tree species richness, and flood duration. The natural hydrological regime facilitates fish access to flooded forests and controls fruit production. Thus, the ability of Amazonian floodplain ecosystems to support frugivorous fish assemblages hinges on extensive and diverse seasonally flooded forests. Given the low functional redundancy in fish seed dispersal networks, diverse frugivorous fish assemblages disperse and maintain diverse forests; vice versa, diverse forests maintain more fish species, underscoring the critically important taxonomic interdependencies that embody Amazonian ecosystems. Effective management strategies must acknowledge that access to diverse and hydrologically functional floodplain forests is essential to ensure the long-term survival of frugivorous fish and, in turn, the long-term sustainability of floodplain forests.

Endoparasite survey in Amazonian manatees (Trichechus inunguis) under rehabilitation in the Peruvian Amazon

Manatee populations are declining worldwide, and all currently existing species are considered vulnerable by the IUCN. The most common problems during nurturing young Amazonian manatees, Trichechus inunguis, in rescue centres are of gastrointestinal nature leading to inappetence, diarrhoea, cachexia and even death. Endoparasites play an important role in the well-being of wildlife in captivity as well as in the wild, though information about relevant protozoan and metazoan endoparasites in Amazonian manatees is still scarce. Therefore, this study aimed to find endoparasites in T. inunguis by analyzing faecal samples from 23 Amazonian manatees which were kept in rescue centres in the Peruvian Amazon. The samples were screened for protozoan and metazoan parasites using coproscopical analysis and molecular tools. Out of twenty juvenile animals eleven were positive for at least one Eimeriidae. Two morphologically different, not yet genetically described Eimeria species were identified. One of them seems to be Eimeria trichechi which has only been described once in 1984 in Amazonian manatees from Brazil. It was not found to lead to clinical symptoms of coccidiosis in this study. The second, Eimeria sp. Type B was associated with clinical coccidiosis in a young Amazonian manatee, which showed gastrointestinal symptoms including diarrhoea, inappetence and cachexia. No other protozoan or metazoan parasite were detected in any of the samples. The present study is the first to investigate endoparasites in Amazonian manatees using molecular tools and is the first to identify an Eimeria species that could be associated with clinical symptoms in T. inunguis. With information from our study rescue centres can improve monitoring of parasites more effectively to reduce morbidity and mortality rates among rehabilitated manatees as well as improve the health status and fitness of animals for a successful release back into the wild.

Trends in Urban Wild Meat Trade of Chelonians (Turtles and Tortoises) in the Peruvian Amazon

Culturally, chelonians are important sources of nutrition and income for rural and urban people in tropical rainforests, but urban trade can cause declines in wild populations. This study analyses the urban chelonian trade and its trends to better understand the impact on free-living populations in the Northern Peruvian Amazon. We studied the urban trade of wild chelonians by conducting 526 days of participant observation and structured questionnaires with the main chelonian vendors in the wet markets of Iquitos between 2006 and 2018. The trade of chelonians decreased by -161.6%, from 22,694 individuals in 2006/07 to 8657 individuals in 2017/18. Chelonoidis denticulatus was the species sold the most (86.3%), followed by Podocnemis unifilis (13.6%). Podocnemis expansa was only sold in 2006/07. River turtle sales increased in the dry season, while sales of Chelonoidis denticulatus decreased. Turtles were the most expensive meat sold in urban markets: 49.7% more expensive than the most frequently consumed fish, Prochilodus nigricans, and 48.4% more expensive than poultry. Turtles represented only 0.19% (SD 0.23) of the index of domestic meat and fish consumption per capita. River turtle eggs are sold by a different set of vendors, and in 2017/18, 570,229 eggs were traded in the market of Belén in Iquitos, equivalent to an approximate lay of 10,418 P. unifilis and 1178 P. expansa females. The high magnitude of the trade of river turtle eggs together with the reduction in their meat trade suggests a prioritization of egg sales, which should improve the conservation of adults, since meat sales can be detrimental to chelonian populations.

The Andes-Amazon-Atlantic pathway: A foundational hydroclimate system for social-ecological system sustainability

The Amazon River Basin's extraordinary social-ecological system is sustained by various water phases, fluxes, and stores that are interconnected across the tropical Andes mountains, Amazon lowlands, and Atlantic Ocean. This "Andes-Amazon-Atlantic" (AAA) pathway is a complex hydroclimatic system linked by the regional water cycle through atmospheric circulation and continental hydrology. Here, we aim to articulate the AAA hydroclimate pathway as a foundational system for research, management, conservation, and governance of aquatic systems of the Amazon Basin. We identify and describe the AAA pathway as an interdependent, multidirectional, and multiscale hydroclimate system. We then present an assessment of recent (1981 to 2020) changes in the AAA pathway, primarily reflecting an acceleration in the rates of hydrologic fluxes (i.e., water cycle intensification). We discuss how the changing AAA pathway orchestrates and impacts social-ecological systems. We conclude with four recommendations for the sustainability of the AAA pathway in ongoing research, management, conservation, and governance.

Pre-contact and post-colonial ecological legacies shape Surinamese rainforests

Disturbances in tropical forests can have long-lasting ecological impacts, but their manifestations (ecological legacies) in modern forests are uncertain. Many Amazonian forests bear the mark of past soil modifications, species enrichments, and fire events, but the trajectories of ecological legacies from the pre-contact or post-colonial period remain relatively unexplored. We assessed the fire and vegetation history from 15 soil cores ranging from 0 to 10 km from a post-colonial Surinamese archaeological site. We show that (1) fires occurred from 96 bc to recent times and induced significant vegetation change, (2) persistent ecological legacies from pre-contact and post-colonial fire and deforestation practices were mainly within 1 km of the archaeological site, and (3) palm enrichment of Attalea, Oenocarpus and Astrocaryum occurred within 0, 1, and 8 km of the archaeological site, respectively. Our results challenge the notion of spatially extensive and persistent ecological legacies. Instead, our data indicate that the persistence and extent of ecological legacies are dependent on their timing, frequency, type, and intensity. Examining the mechanisms and manifestations of ecological legacies is crucial in assessing forest resilience and Indigenous and local land rights in the highly threatened Amazonian forests.

Extinction risk of the world's freshwater mammals

The continued loss of freshwater habitats poses a significant threat to global biodiversity. We reviewed the extinction risk of 166 freshwater aquatic and semiaquatic mammals-a group rarely documented as a collective. We used the International Union for the Conservation of Nature Red List of Threatened Species categories as of December 2021 to determine extinction risk. Extinction risk was then compared among taxonomic groups, geographic areas, and biological traits. Thirty percent of all freshwater mammals were listed as threatened. Decreasing population trends were common (44.0%), including a greater rate of decline (3.6% in 20 years) than for mammals or freshwater species as a whole. Aquatic freshwater mammals were at a greater risk of extinction than semiaquatic freshwater mammals (95% CI -7.20 to -1.11). Twenty-nine species were data deficient or not evaluated. Large species (95% CI 0.01 to 0.03) with large dispersal distances (95% CI 0.03 to 0.15) had a higher risk of extinction than small species with small dispersal distances. The number of threatening processes associated with a species compounded their risk of extinction (95% CI 0.28 to 0.77). Hunting, land clearing for logging and agriculture, pollution, residential development, and habitat modification or destruction from dams and water management posed the greatest threats to these species. The basic life-history traits of many species were poorly known, highlighting the need for more research. Conservation of freshwater mammals requires a host of management actions centered around increased protection of riparian areas and more conscientious water management to aid the recovery of threatened species.

Blood Biochemical Reference Intervals of Black Caimans (Melanosuchus niger) and Spectacled Caimans (Caiman crocodilus) in the Brazilian Amazon Region

Reference intervals for physiologic parameters, crucial for assessing the health status of animals, have been documented for various crocodilian species across the globe. Nonetheless, the establishment of plasma biochemical reference intervals specific to Amazonian crocodilians remains incomplete. In an effort to address this gap, we procured blood samples from 65 black caimans (Melanosuchus niger) and 58 spectacled caimans (Caiman crocodilus) during the period of September-December 2019 within the Anavilhanas National Park in the Brazilian Amazon region We aimed to define reference intervals for 11 key plasma variables measured, namely glucose, triglycerides, total cholesterol, calcium, magnesium, sodium, potassium, albumin, total protein, uric acid, and urea. In general, the determined blood reference intervals aligned closely with those established for other crocodilian species. Some specific measurements, such as total cholesterol, sodium, and magnesium, exhibited distinct variations based on the species. Furthermore, female black caimans showcased elevated cholesterol levels compared with their male counterparts. Within the spectacled caimans, disparities related to sex were evident solely in the case of electrolytes sodium and potassium, with males demonstrating higher levels compared with females. These reference intervals not only provide data for assessing potential fluctuations in the health of wild or captive Amazonian crocodilians but also hold value for veterinary management.

The historical ecology of the world's largest tropical country uniquely chronicled by its municipal coat-of-arms symbology

Coats-of-arms representing municipal counties express local patterns of rural economics, natural resource and land use, features of the natural capital, and the cultural heritage of either aborigines or colonists. We reconstruct the subnational economic and political timeline of the world's largest tropical country using municipal coats-of-arms to reinterpret Brazil's historical ecology. We assessed all natural resource, biophysical, agricultural, and ethnocultural elements of 5,197 coats-of-arms (93.3%) distributed throughout Brazil. We extracted socioenvironmental co-variables for any municipality to understand and predict the relationships between social inequality, environmental degradation, and the historical ecology symbology. We analyzed data via ecological networks and structural equation models. Our results show that the portfolio of political-administrative symbology in coats-of-arms is an underutilized tool to understand the history of colonization frontiers. Although Brazil is arguably Earth's most species-rich country, generations of political leaders have historically failed to celebrate this biodiversity, instead prioritizing a symbology depicted by icons of frontier conquest and key natural resources. Brazilian historical ecology reflects the relentless depletion of the natural resource capital while ignoring profound social inequalities. Degradation of natural ecosystems is widespread in Brazilian economy, reflecting a legacy of boom-and-bust rural development that so far has failed to deliver sustainable socioeconomic prosperity.

Ethnoprimatology of the Shipibo of the upper Ucayali River, Perú

In the Anthropocene, primate conservation can only take place when considering human culture, perspectives, and needs. Such approaches are increasingly important under the growing impact of anthropogenic activities and increasing number of threatened primates. The Amazon rainforest, rich in cultural and biological diversity, where indigenous people play a crucial role in primate conservation, provides ample opportunity to study human-primate interactions and the sociocultural context in which they occur. Human activities threaten the Amazon's fragile ecosystems and its primates, which play a key role in its maintenance and regeneration. This study focuses on one of the largest indigenous groups in the Peruvian Amazon: the Shipibo. Interviews and participant observation were used to investigate local perceptions of animal presence and depletion, food preferences, and how primates are incorporated into daily life and culture. Since time immemorial and still today, primates remain important in Shipibo culture, mythology, and subsistence. Local Shipibo participants consistently identified the presence of 13 species of primate. Primates were among the preferred species for consumption, pet keeping, and held a fundamental role in mythology, traditional knowledge, and storytelling. Large-bodied primates were often mentioned as being locally extinct, with reports and observations suggesting increasing consumption of smaller-bodied primates. Commonly perceived reasons for primate depletion include noise disturbance, hunting, and population growth, often in parallel. This study sheds light on the cultural context of an area rich in biodiversity, where primates, essential for ecological balance and integral to Shipibo lives and identity, are being depleted. We highlight the need for an inclusive ethnoprimatological approach to conserving primates and preserving indigenous heritage while improving local livelihoods.

Multi-lingual multi-platform investigations of online trade in jaguar parts

We conducted research to understand online trade in jaguar parts and develop tools of utility for jaguars and other species. Our research took place to identify potential trade across 31 online platforms in Spanish, Portuguese, English, Dutch, French, Chinese, and Vietnamese. We identified 230 posts from between 2009 and 2019. We screened the images of animal parts shown in search results to verify if from jaguar; 71 posts on 12 different platforms in four languages were accompanied by images identified as definitely jaguar, including a total of 125 jaguar parts (50.7% posts in Spanish, 25.4% Portuguese, 22.5% Chinese and 1.4% French). Search effort varied among languages due to staff availability. Standardizing for effort across languages by dividing number of posts advertising jaguars by search time and number of individual searches completed via term/platform combinations changed the proportions the rankings of posts adjusted for effort were led by Portuguese, Chinese, and Spanish. Teeth were the most common part; 156 posts offered at least 367 teeth and from these, 95 were assessed as definitely jaguar; 71 of which could be linked to a location, with the majority offered for sale from Mexico, China, Bolivia, and Brazil (26.8, 25.4, 16.9, and 12.7% respectively). The second most traded item, skins and derivative items were only identified from Latin America: Brazil (7), followed by Peru (6), Bolivia (3), Mexico (2 and 1 skin piece), and Nicaragua and Venezuela (1 each). Whether by number of posts or pieces, the most commonly parts were: teeth, skins/pieces of skins, heads, and bodies. Our research took place within a longer-term project to assist law enforcement in host countries to better identify potential illegal trade and presents a snapshot of online jaguar trade and methods that also may have utility for many species traded online.

Large-scale population disappearances and cycling in the white-lipped peccary, a tropical forest mammal

Many vertebrate species undergo population fluctuations that may be random or regularly cyclic in nature. Vertebrate population cycles in northern latitudes are driven by both endogenous and exogenous factors. Suggested causes of mysterious disappearances documented for populations of the Neotropical, herd-forming, white-lipped peccary (Tayassu pecari, henceforth "WLP") include large-scale movements, overhunting, extreme floods, or disease outbreaks. By analyzing 43 disappearance events across the Neotropics and 88 years of commercial and subsistence harvest data for the Amazon, we show that WLP disappearances are widespread and occur regularly and at large spatiotemporal scales throughout the species' range. We present evidence that the disappearances represent 7-12-year troughs in 20-30-year WLP population cycles occurring synchronously at regional and perhaps continent-wide spatial scales as large as 10,000-5 million km2. This may represent the first documented case of natural population cyclicity in a Neotropical mammal. Because WLP populations often increase dramatically prior to a disappearance, we posit that their population cycles result from over-compensatory, density-dependent mortality. Our data also suggest that the increase phase of a WLP cycle is partly dependent on recolonization from proximal, unfragmented and undisturbed forests. This highlights the importance of very large, continuous natural areas that enable source-sink population dynamics and ensure re-colonization and local population persistence in time and space.

Global importance of Indigenous Peoples, their lands, and knowledge systems for saving the world's primates from extinction

Primates, represented by 521 species, are distributed across 91 countries primarily in the Neotropic, Afrotropic, and Indo-Malayan realms. Primates inhabit a wide range of habitats and play critical roles in sustaining healthy ecosystems that benefit human and nonhuman communities. Approximately 68% of primate species are threatened with extinction because of global pressures to convert their habitats for agricultural production and the extraction of natural resources. Here, we review the scientific literature and conduct a spatial analysis to assess the significance of Indigenous Peoples' lands in safeguarding primate biodiversity. We found that Indigenous Peoples' lands account for 30% of the primate range, and 71% of primate species inhabit these lands. As their range on these lands increases, primate species are less likely to be classified as threatened or have declining populations. Safeguarding Indigenous Peoples' lands, languages, and cultures represents our greatest chance to prevent the extinction of the world's primates.

The global contribution of invasive vertebrate eradication as a key island restoration tool

Islands are global hotspots for biodiversity and extinction, representing ~ 5% of Earth's land area alongside 40% of globally threatened vertebrates and 61% of global extinctions since the 1500s. Invasive species are the primary driver of native biodiversity loss on islands, though eradication of invasive species from islands has been effective at halting or reversing these trends. A global compendium of this conservation tool is essential for scaling best-practices and enabling innovations to maximize biodiversity outcomes. Here, we synthesize over 100 years of invasive vertebrate eradications from islands, comprising 1550 eradication attempts on 998 islands, with an 88% success rate. We show a significant growth in eradication activity since the 1980s, primarily driven by rodent eradications. The annual number of eradications on islands peaked in the mid-2000s, but the annual area treated continues to rise dramatically. This trend reflects increases in removal efficacy and project complexity, generating increased conservation gains. Our synthesis demonstrates the collective contribution of national interventions towards global biodiversity outcomes. Further investment in invasive vertebrate eradications from islands will expand biodiversity conservation while strengthening biodiversity resilience to climate change and creating co-benefits for human societies.

Socioecological vulnerability and the risk of zoonotic disease emergence in Brazil

In developing countries, outbreaks of zoonotic diseases (ZDs) result from intertwined ecological, socioeconomic, and demographic processes that shape conditions for (i) increased contact between vulnerable human population and wildlife in areas undergoing environmental degradation and (ii) the rapid geographic spread of infections across socially vulnerable regions. In Brazil, recent increases in environmental and social vulnerabilities, amplified by economic and political crises, are potential triggers for outbreaks. We discuss Brazilian features that favor outbreaks and show a novel quantitative method for zoonotic risk assessment. Using data on nine ZDs from 2001 to 2019, we found that the most significant causal variables were vegetation cover and city remoteness. Furthermore, 8 of 27 states presented low-level risk of ZD outbreaks. Given the ZD-bushmeat connection, we identified central hunted mammals that should be surveilled to prevent spillover events. The current challenge is to coordinate intersectoral collaboration for effective One Health management in megadiverse countries with high social vulnerability and growing environmental degradation like Brazil.

Temporal and Spatial Stability on the Population Structure of Consumed and Illegally Traded Big-Headed Amazon River Turtle in the Negro River Basin, Central Amazon, Brazil

Freshwater turtles are a valuable food resource for riverine human communities and have been historically overharvested throughout all major tropical large river basins, with consequent gradual population decreases. Even species considered to be abundant are declining, and in many cases were brought to a condition of near extinction. The collection of adult females during breeding season on nesting beaches is considered a major factor in population decline and subsequent loss of food sources for humans. There is growing consensus that adult females constitute the category which turtle populations can least afford to lose. In the Negro River Basin, the podocnemidid big-headed Amazon River turtle, Peltocephalus dumerilianus, is heavily exploited for consumption and poached for illegal trade among riverine communities and cities. Between 1997 and 2002 and in 2019, we measured live turtles and carapaces of big-headed turtles in the city of Barcelos and its surroundings, and among the riverine families living in the Jaú National Park. We compared body sizes and sex ratios between areas, periods, and between consumed and traded individuals. We found no differences between areas, even those close to Barcelos and the ones belonging to remote areas where pressure levels are lower. The individuals consumed in Jaú National Park are larger than those poached for illegal trade in both areas. There was an increase in average size between 1997 and 2002. Sex ratio was slightly skewed toward males, which were larger, and did not differ between areas and periods. Results indicate stability on size of harvested populations, which may be supporting current extraction levels. Data suggest this could be related to the absence of adult female capture during nesting for this species. We recommend protection strategies for other Amazon Podocnemidid species that focus on the protection of nesting beaches and surrounding areas where adults occupy, specifically in areas under communal protection.

Community-Based Conservation and Management of Chelonians in the Amazon

Chelonians represent an important resource in the Amazon, either as a source of protein at the base of the food chain of aquatic and transition ecosystems, or in the dispersion of seeds of plants from floodplains and flooded forests. The consumption and predatory exploitation of their meat and eggs by local populations has been, and still is, one of the main threats to these animals. Community-based conservation projects allied to official protection programs have been restoring populations of chelonians of the genus Podocnemis throughout the Amazon since 1974. In this study, we analyzed the historical time series of protection data of Podocnemis expansa, P. unifilis, P. sextuberculata and P. erythrocephala in areas protected by the government and communities in the Amazonas state and northwest of Pará state. Between 1974 and 2019, 230,444 nests and 21,350,201 hatchlings of P. expansa, 170,076 nests and 3,229,821 hatchlings of P. unifilis, 647,715 nests and 6,410,092 hatchlings of P. sextuberculata and 24,617 nests and 168,856 hatchlings of P. erythrocephala were protected. Community protection schemes emerged in 1990, and covered 80.7% of the areas and produced 64.2% of P. unifilis hatchlings and 44.6% of P. sextuberculata hatchlings. The areas with the highest production of P. expansa remain under government protection (57.4%). Using the time series of production of nests and hatchlings per beach, logistic growth curves were estimated, and the values of r and K were compared between the two protection systems (government and community). Beaches controlled by the government showed higher support capacity in the production of nests (1,910.7 ± 1,035) and hatchlings (211,513 ± 93,031) of P. expansa and P. sextuberculata (81,160 ± 34,924 hatchlings). However, the communities were more efficient in protecting nests (r = 0.102 ± 0.2315) and hatchlings (r = 0.282 ± 0.166) of P. unifilis. Community-based protection and monitoring programs are an important component that should be incorporated by the government’s environmental agencies for the management and conservation of turtles in the Amazon.

Impacts of meander migration on the Amazon riverine communities using Landsat time series and cloud computing

River meander migration is a process that maintains biodiverse riparian ecosystems by producing highly sinuous rivers, and oxbow lakes. However, although the floodplains support communities with fish and other practices in the region, meandering rivers can directly affect the life of local communities. For example, erosion of river banks promotes the loss of land on community shores, while sedimentation increases the distance from house to the river. Therefore, communities living along the Juruá River, one of the most sinuous rivers on Earth, are vulnerable to long-term meander migration. In this study, the river meander migration was detected by using Landsat 5-8 data from 1984 to 2020. A per-pixel Water Surface Change Detection Algorithm (WSCDA) was developed to classify regions subject to erosion and sedimentation processes by applying temporal regressions on the water index, called Modified Normalized Difference Water Index (mNDWI). The WSCDA classified the meander migration with omission and commission errors lower than 13.44% and 7.08%, respectively. Then, the number of riparian communities was mapped using high spatial resolution SPOT images. A total of 369 communities with no road access were identified, the majority of which living in stable regions (58.8%), followed by sedimentation (26.02%) and erosion (15.18%) areas. Furthermore, we identified that larger communities (>20 houses) tend to live in more stable locations (70%) compared to smaller communities (1-10 houses) with 55.6%. A theoretical model was proposed to illustrate the main impacts of meander migration on the communities, related to Inundation, Mobility Change, and Food Security. This is the first study exploring the relationship between meander migration and riverine communities at watershed-level, and the results support the identification of vulnerable communities to improve local planning and floodplain conservation.

Human-wildlife conflicts with crocodilians, cetaceans and otters in the tropics and subtropics

Conservation of freshwater biodiversity and management of human-wildlife conflicts are major conservation challenges globally. Human-wildlife conflict occurs due to attacks on people, depredation of fisheries, damage to fishing equipment and entanglement in nets. Here we review the current literature on conflicts with tropical and subtropical crocodilians, cetaceans and otters in freshwater and brackish habitats. We also present a new multispecies case study of conflicts with four freshwater predators in the Western Amazon: black caiman (Melanosuchus niger), giant otter (Pteronura brasiliensis), boto (Inia geoffrensis) and tucuxi (Sotalia fluviatilis). Documented conflicts occur with 34 crocodilian, cetacean and otter species. Of the species reviewed in this study, 37.5% had conflicts frequently documented in the literature, with the saltwater crocodile (Crocodylus porosus) the most studied species. We found conflict severity had a positive relationship with species body mass, and a negative relationship with IUCN Red List status. In the Amazonian case study, we found that the black caiman was ranked as the greatest ‘problem’ followed by the boto, giant otter and tucuxi. There was a significant difference between the responses of local fishers when each of the four species were found entangled in nets. We make recommendations for future research, based on the findings of the review and Amazon case study, including the need to standardise data collection.

Eighty-four per cent of all Amazonian arboreal plant individuals are useful to humans

Plants have been used in Amazonian forests for millennia and some of these plants are disproportionally abundant (hyperdominant). At local scales, people generally use the most abundant plants, which may be abundant as the result of management of indigenous peoples and local communities. However, it is unknown whether plant use is also associated with abundance at larger scales. We used the population sizes of 4,454 arboreal species (trees and palms) estimated from 1946 forest plots and compiled information about uses from 29 Amazonian ethnobotany books and articles published between 1926 and 2013 to investigate the relationship between species usefulness and their population sizes, and how this relationship is influenced by the degree of domestication of arboreal species across Amazonia. We found that half of the arboreal species (2,253) are useful to humans, which represents 84% of the estimated individuals in Amazonian forests. Useful species have mean populations sizes six times larger than non-useful species, and their abundance is related with the probability of usefulness. Incipiently domesticated species are the most abundant. Population size was weakly related to specific uses, but strongly related with the multiplicity of uses. This study highlights the enormous usefulness of Amazonian arboreal species for local peoples. Our findings support the hypothesis that the most abundant plant species have a greater chance to be useful at both local and larger scales, and suggest that although people use the most abundant plants, indigenous people and local communities have contributed to plant abundance through long-term management.

Using crime script analysis to understand wildlife poaching in Vietnam

Poaching can contribute to the failure of biodiversity conservation efforts and inflict diverse harms on human livelihoods. We applied crime script analysis to the case of snare poaching-an illegal hunting activity-in three Vietnamese protected areas. Our goal was to enhance the understanding about the opportunity structure underlying snare poaching to advance the suite of community-based crime prevention activities. We analyzed crime scripts for three types of poachers across nine stages of the poaching process using expert-based elicitation with 13 workshop participants in Vinh, Vietnam, 2018. Five stages were similar, clustered toward the early stages, and two were different, clustered around middle crime stages. Analysis produced systematic crime-specific insight about the procedural aspects and requirements for poaching from preparation to hunt to selling one's catch. Stages identify multiple entry points to apply prevention techniques and match techniques with different types of snare poaching or poachers. Although this research focused on protected areas, the interdisciplinary approach applied herein may be adapted to other conservation contexts.

Community-based conservation with formal protection provides large collateral benefits to Amazonian migratory waterbirds

Populations of migratory waterbirds are facing dramatic declines worldwide due to illegal hunting, habitat loss and climate change. Conservation strategies to reverse these trends are imperative, especially in tropical developing countries, which almost invariably allocate insufficient levels of investment for environmental protection. Here, we compared the effectiveness of sustainable-use Protected Areas (PAs) and Community-based Conservation (CBC) arrangements for the conservation of migratory waterbirds that breed on seasonal riverine sandy beaches in Brazilian Amazonia. We modeled local population responses of four migratory waterbird species on 155 beaches along a ~1,600 km section of a major tributary of the Amazon, as a function of community enforcement, official protection status, human pressure and landscape features. We show that 21 community-protected beaches within the study area host more than 80% of all sampled birds. Black Skimmers showed the most dramatic response, with breeding numbers 135-fold larger in CBC arrangements compared to beaches with no official protection status. The same pattern was observed for nesting Large-Billed and Yellow-Billed Terns. For the Near Threatened Orinoco Goose, PA status was the strongest predictor of local population size. These dramatic results demonstrate the value of protected refugia, achieved through the concerted action of participating local communities, to support breeding populations of key waterbird species. This highly-effective and low-cost conservation model can potentially be replicated in other regions of the developing world experiencing increasingly intensive exploitation of riverine natural resources.

Investigating the risks of removing wild meat from global food systems

The COVID-19 pandemic has brought humanity’s strained relationship with nature into sharp focus, with calls for cessation of wild meat trade and consumption, to protect public health and biodiversity.^1,2 However, the importance of wild meat for human nutrition, and its tele-couplings to other food production systems, mean that the complete removal of wild meat from diets and markets would represent a shock to global food systems.3, 4, 5, 6 The negative consequences of this shock deserve consideration in policy responses to COVID-19. We demonstrate that the sudden policy-induced loss of wild meat from food systems could have negative consequences for people and nature. Loss of wild meat from diets could lead to food insecurity, due to reduced protein and nutrition, and/or drive land-use change to replace lost nutrients with animal agriculture, which could increase biodiversity loss and emerging infectious disease risk. We estimate the magnitude of these consequences for 83 countries, and qualitatively explore how prohibitions might play out in 10 case study places. Results indicate that risks are greatest for food-insecure developing nations, where feasible, sustainable, and socially desirable wild meat alternatives are limited. Some developed nations would also face shocks, and while high-capacity food systems could more easily adapt, certain places and people would be disproportionately impacted. We urge decision-makers to consider potential unintended consequences of policy-induced shocks amidst COVID-19; and take holistic approach to wildlife trade interventions, which acknowledge the interconnectivity of global food systems and nature, and include safeguards for vulnerable people.

The socio-cultural significance of mineral licks to the Maijuna of the Peruvian Amazon: implications for the sustainable management of hunting

BACKGROUND

The overhunting of wild species is a major threat to biodiversity in the Amazon; yet, managed, sustainable hunting is widely considered part of the solution to conserving wildlife populations. Hunting is both a culturally important activity for Indigenous people and provides an important food source. Mineral licks, a focal point of hunting in Amazonia, are naturally occurring areas in the forest where animals come to obtain essential minerals or clays that are thought to neutralize plant-based alkaloids. We sought to better understand the socio-cultural importance of mineral licks to the Maijuna Indigenous group to inform the sustainable management of this habitat and associated wildlife populations.

METHODS

Semi-structured interviews, focus groups, and participatory mapping were carried out with hunters to assess the significance of mineral licks and their associated animal resources as well as to determine how the relationship that the Maijuna have with mineral licks has changed over time.

RESULTS

Mineral licks are culturally significant and useful to the Maijuna in a variety of ways. Hunters target these areas year-round both during the day and night, and animals killed are consumed for subsistence and sold to generate income. The spatial use of mineral licks across the landscape is determined on the generational family level, with families maintaining exclusive use of selected mineral licks and excluding access by other hunters. The Maijuna also have traditional beliefs for why animals visit mineral licks, which is linked to the traditional Maijuna story of the creation of the first tapir. The relationship that the Maijuna have with mineral licks has changed considerably over time, which is observed through changes in hunting technologies and methods as well as the loss of traditional knowledge and beliefs.

CONCLUSIONS

Traditional and current Maijuna hunting conventions, in which families maintain exclusive use of selected mineral licks, likely reduce the probability of overexploitation of animal populations. Community-based management plans for mineral licks in Maijuna lands and beyond must incorporate and account for the multiple cultural and economic needs of local communities while also striving toward ecological sustainability. Country-wide strategies to conserving forests and using them sustainably should aim to ensure land tenure for rural peoples and encourage management that incorporates traditional sustainable hunting conventions.

Extent, intensity and drivers of mammal defaunation: a continental-scale analysis across the Neotropics

Neotropical mammal diversity is currently threatened by several chronic human-induced pressures. We compiled 1,029 contemporary mammal assemblages surveyed across the Neotropics to quantify the continental-scale extent and intensity of defaunation and understand their determinants based on environmental covariates. We calculated a local defaunation index for all assemblages-adjusted by a false-absence ratio-which was examined using structural equation models. We propose a hunting index based on socioenvironmental co-variables that either intensify or inhibit hunting, which we used as an additional predictor of defaunation. Mammal defaunation intensity across the Neotropics on average erased 56.5% of the local source fauna, with ungulates comprising the most ubiquitous losses. The extent of defaunation is widespread, but more incipient in hitherto relatively intact major biomes that are rapidly succumbing to encroaching deforestation frontiers. Assemblage-wide mammal body mass distribution was greatly reduced from a historical 95th-percentile of ~ 14 kg to only ~ 4 kg in modern assemblages. Defaunation and depletion of large-bodied species were primarily driven by hunting pressure and remaining habitat area. Our findings can inform guidelines to design transnational conservation policies to safeguard native vertebrates, and ensure that the "empty ecosystem" syndrome will be deterred from reaching much of the New World tropics.

Habitat use of the ocelot (Leopardus pardalis) in Brazilian Amazon

Amazonia forest plays a major role in providing ecosystem services for human and sanctuaries for wildlife. However, ongoing deforestation and habitat fragmentation in the Brazilian Amazon has threatened both. The ocelot is an ecologically important mesopredator and a potential conservation ambassador species, yet there are no previous studies on its habitat preference and spatial patterns in this biome. From 2010 to 2017, twelve sites were surveyed, totaling 899 camera trap stations, the largest known dataset for this species. Using occupancy modeling incorporating spatial autocorrelation, we assessed habitat use for ocelot populations across the Brazilian Amazon. Our results revealed a positive sigmoidal correlation between remote-sensing derived metrics of forest cover, disjunct core area density, elevation, distance to roads, distance to settlements and habitat use, and that habitat use by ocelots was negatively associated with slope and distance to river/lake. These findings shed light on the regional scale habitat use of ocelots and indicate important species-habitat relationships, thus providing valuable information for conservation management and land-use planning.

Not Seeing the Forest for the Trees: The Oversight of Defaunation in REDD+ and Global Forest Governance

Over the past decade, countries have strived to develop a global governance structure to halt deforestation and forest degradation, by achieving the readiness requirements for Reducing Emissions from Deforestation and forest Degradation (REDD+). Nonetheless, deforestation continues, and seemingly intact forest areas are being degraded. Furthermore, REDD+ may fail to consider the crucial ecosystem functions of forest fauna including seed dispersal and pollination. Throughout the tropics, forest animal populations are depleted by unsustainable hunting to the extent that many forests are increasingly devoid of larger mammals—a condition referred to as empty forests. Large mammals and birds, who often disperse seeds of larger more carbon-rich tree species, are preferentially targeted by hunters and the first to be depleted. Such defaunation has cascading ecosystem effects, changing forest structure and composition with implications for carbon storage capacity. Failure to address defaunation would therefore be a major oversight in REDD+, compromising its long-term viability. We carried out a desktop study reviewing REDD+ documents and national implementation efforts in Colombia, Ecuador, Nigeria, Tanzania, and Indonesia to assess the extent to which they address hunting and acknowledged the ecosystem functions of fauna. We also assessed sub-national REDD+ projects to determine whether they recognized hunting and if and how they incorporated hunting management and wildlife monitoring at the project level. Moreover, we assessed to what extent sub-national REDD+ projects addressed the long-term impacts of the sustainability of hunting on forest ecosystem function including carbon storage. We found that hunting, the risk of defaunation, and its effects have been ignored in the REDD+ policy process at both the international and national levels. At the project level, we found some reference to hunting and the risks posed by the loss of forest fauna, albeit only addressed superficially. Our results underline the fact that forest ecosystems are being reduced to their carbon content and that, despite the rhetoric of biodiversity co-benefits, fauna is not treated as a functional component of forests. This neglect threatens to undermine forest ecosystem function and service delivery as well as long-term forest carbon assimilation capacity and hence, ultimately, to compromise REDD+ objectives.

Riverine people's knowledge of the Vulnerable Amazonian manatee Trichechus inunguis in contrasting protected areas

Traditional knowledge gained through daily interactions with the environment can yield insights into processes at temporal or spatial scales that may be overlooked by conventional scientific research. Ninety interviews were conducted with riverine people in the vicinity of Anavilhanas National Park, Tapajós–Arapiuns Extractive Reserve and Tapajós National Forest in the Brazilian Amazon, with the aim to increase knowledge of the feeding habits of the Amazonian manatee Trichechus inunguis and evaluate its conservation status in contrasting protected areas. In Anavilhanas respondents identified 31 plant species consumed by the manatee, of which vines had the highest cognitive salience index value (the summed importance of each plant species), even though they are available to manatees only during the high-water season. In the Tapajós region 37 plant species were identified, with submerged species with floating leaves being the main component of the manatee's diet. Although hunting has declined it still occurs in Anavilhanas, which is susceptible to environmental crimes because of its proximity to urban centres. Manatee hunting seems to be infrequent in the Tapajós region, having little impact on the population. Given the broad knowledge within the local community about the Amazonian manatee, involvement of riverine people in manatee conservation activities is fundamental for reducing threats and increasing conservation effectiveness.

Growth rings of Brazil nut trees (Bertholletia excelsa) as a living record of historical human disturbance in Central Amazonia

The Brazil nut tree (Bertholletia excelsa) is an iconic and economically valuable species that dominates vast swathes of the Amazon Basin. This species seems to have been an important part of human subsistence strategies in the region from at least the Early Holocene, and its current distribution may be a legacy of past human settlement. Because B. excelsa is a long-lived pioneer tree it requires natural or human disturbances to increase light availability in the understory for a successful establishment. However, it remains unclear how the long-term population dynamics of this species have been shaped by pre-colonial and post-colonial human practices. Here, we use tree-ring analyses to look at changes in growing conditions over the past 400 years in a Brazil nut tree population in Central Amazonia. We identify changes in tree recruitment and growth rates associated not only with regional climatic variability, but also major political and socio-economic activities recorded by historical documents in the vicinity of Manaus. We demonstrate that the expansion of a post-colonial political center (Manaus) from the middle of the 18th century onwards coincided with a reduction in recruitment of B. excelsa. We argue that this hiatus suggests the interruption of indigenous management practices, probably due to the collapse of pre-Columbian societies. A second recruitment pulse, and unprecedented cycles of growth release and suppression, aligns with a shift to modern exploitation of the forest into the 20th century. Our findings shed light on how past histories of human-forest interactions can be revealed by the growth rings of trees in Amazonia. Future interdisciplinary analysis of these trees should enable more detailed investigation of how human forest management has changed in this part of the world, through pre-colonial, colonial, and industrial periods of human activity, with potential implications for conservation.