Catalytic resonance of ammonia synthesis by simulated dynamic ruthenium crystal strain

Catalytic resonance theory: the catalytic mechanics of programmable ratchets

Catalytic reaction networks of multiple elementary steps operating under dynamic conditions via a programmed input oscillation are difficult to interpret and optimize due to reaction system complexity. To understand these dynamic systems, individual elementary catalytic reactions oscillating between catalyst states were evaluated to identify their three fundamental characteristics that define their ability to promote reactions away from equilibrium. First, elementary catalytic reactions exhibit directionality to promote reactions forward or backward from equilibrium as determined by a ratchet directionality metric comprised of the input oscillation duty cycle and the reaction rate constants. Second, catalytic ratchets are defined by the catalyst state of strong or weak binding that permits reactants to proceed through the transition state. Third, elementary catalytic ratchets exhibit a cutoff frequency which defines the transition in applied frequency for which the catalytic ratchet functions to promote chemistry away from equilibrium. All three ratchet characteristics are calculated from chemical reaction parameters including rate constants derived from linear scaling parameters, reaction conditions, and catalyst electronic state. The characteristics of the reaction network's constituent elementary catalytic reactions provided an interpretation of complex reaction networks and a method of predicting the behavior of dynamic surface chemistry on oscillating catalysts.

Molecular Ratchets and Kinetic Asymmetry: Giving Chemistry Direction

Over the last two decades ratchet mechanisms have transformed the understanding and design of stochastic molecular systems-biological, chemical and physical-in a move away from the mechanical macroscopic analogies that dominated thinking regarding molecular dynamics in the 1990s and early 2000s (e.g. pistons, springs, etc), to the more scale-relevant concepts that underpin out-of-equilibrium research in the molecular sciences today. Ratcheting has established molecular nanotechnology as a research frontier for energy transduction and metabolism, and has enabled the reverse engineering of biomolecular machinery, delivering insights into how molecules 'walk' and track-based synthesisers operate, how the acceleration of chemical reactions enables energy to be transduced by catalysts (both motor proteins and synthetic catalysts), and how dynamic systems can be driven away from equilibrium through catalysis. The recognition of molecular ratchet mechanisms in biology, and their invention in synthetic systems, is proving significant in areas as diverse as supramolecular chemistry, systems chemistry, dynamic covalent chemistry, DNA nanotechnology, polymer and materials science, molecular biology, heterogeneous catalysis, endergonic synthesis, the origin of life, and many other branches of chemical science. Put simply, ratchet mechanisms give chemistry direction. Kinetic asymmetry, the key feature of ratcheting, is the dynamic counterpart of structural asymmetry (i.e. chirality). Given the ubiquity of ratchet mechanisms in endergonic chemical processes in biology, and their significance for behaviour and function from systems to synthesis, it is surely just as fundamentally important. This Review charts the recognition, invention and development of molecular ratchets, focussing particularly on the role for which they were originally envisaged in chemistry, as design elements for molecular machinery. Different kinetically asymmetric systems are compared, and the consequences of their dynamic behaviour discussed. These archetypal examples demonstrate how chemical systems can be driven inexorably away from equilibrium, rather than relax towards it.

Clarifying mechanisms and kinetics of programmable catalysis

Programmable catalysis-the purposeful oscillation of catalytic potential energy surfaces (PES)-has emerged as a promising method for the acceleration of catalyzed reaction rates. However, theoretical study of programmable catalysis has been limited by onerous computational demands of integrating the stiff differential equations that describe periodic cycling between PESs. This work details methods that reduce the computational cost of finding the limit cycle by ≳108×. These methods produce closed-form analytical solutions for didactic case studies, examination of which provides physical insights of programmable catalysis mechanisms. Generalization of these analyses to more complex reaction networks, including CO oxidation on Pt (111) surfaces, exposes the key catalyst properties required to achieve enhanced rates and conversions via one of two programmable catalysis mechanisms: quasi-static (high frequency) and stepwise (intermediate frequency). Analytical description of each mechanism is critical in understanding the consequences of the Sabatier principle on achievable rate enhancement through programmed catalysis.

Fabrication of Large-Area Metal-on-Carbon Catalytic Condensers for Programmable Catalysis

Catalytic condensers stabilize charge on either side of a high-k dielectric film to modulate the electronic states of a catalytic layer for the electronic control of surface reactions. Here, carbon sputtering provided for fast, large-scale fabrication of metal-carbon catalytic condensers required for industrial application. Carbon films were sputtered on HfO2 dielectric/p-type Si with different thicknesses (1, 3, 6, and 10 nm), and the enhancement of conductance and capacitance of carbon films was observed upon increasing the carbon thickness following thermal treatment at 400 °C. After Pt deposition on the carbon films, the Pt catalytic condenser exhibited a high capacitance of ∼210 nF/cm2 that was maintained at a frequency ∼1000 Hz, satisfying the requirement for a dynamic catalyst to implement catalytic resonance. Temperature-programmed desorption of carbon monoxide yielded CO desorption peaks that shifted in temperature with the varying potential applied to the condenser (-6 or +6 V), indicating a shift in the binding energy of carbon monoxide on the Pt condenser surface. A substantial increase in capacitance (∼2000 nF/cm2) of the Pt-on-carbon devices was observed at elevated temperatures of 400 °C that can modulate ∼10% of charge per metal atom when 10 V potential was applied. A large catalytic condenser of 42 cm2 area Pt/C/HfO2/Si exhibited a high capacitance of 9393 nF with a low leakage current/capacitive current ratio (<0.1), demonstrating the practicality and versatility of the facile, large-scale fabrication method for metal-carbon catalytic condensers.

Flexible and Extensive Platinum Ion Gel Condensers for Programmable Catalysis

Catalytic condensers composed of ion gels separating a metal electrode from a platinum-on-carbon active layer were fabricated and characterized to achieve more powerful, high surface area dynamic heterogeneous catalyst surfaces. Ion gels comprised of poly(vinylidene difluoride)/1-ethyl-3-methylimidazolium bis(trifluoromethylsulfonyl) imide were spin coated as a 3.8 μm film on a Au surface, after which carbon sputtering of a 1.8 nm carbon film and electron-beam evaporation of 2 nm Pt clusters created an active surface exposed to reactant gases. Electronic characterization indicated that most charge condensed within the Pt nanoclusters upon application of a potential bias, with the condenser device achieving a capacitance of ∼20 μF/cm2 at applied frequencies of up to 120 Hz. The maximum charge of ∼1014 |e-| cm-2 was condensed under stable device conditions at 200 °C on catalytic films with ∼1015 sites cm-2. Grazing incidence infrared spectroscopy measured carbon monoxide adsorption isobars, indicating a change in the CO* binding energy of ∼19 kJ mol-1 over an applied potential bias of only 1.25 V. Condensers were also fabricated on flexible, large area Kapton substrates allowing stacked or tubular form factors that facilitate high volumetric active site densities, ultimately enabling a fast and powerful catalytic condenser that can be fabricated for programmable catalysis applications.

Ratcheting synthesis

Synthetic chemistry has traditionally relied on reactions between reactants of high chemical potential and transformations that proceed energetically downhill to either a global or local minimum (thermodynamic or kinetic control). Catalysts can be used to manipulate kinetic control, lowering activation energies to influence reaction outcomes. However, such chemistry is still constrained by the shape of one-dimensional reaction coordinates. Coupling synthesis to an orthogonal energy input can allow ratcheting of chemical reaction outcomes, reminiscent of the ways that molecular machines ratchet random thermal motion to bias conformational dynamics. This fundamentally distinct approach to synthesis allows multi-dimensional potential energy surfaces to be navigated, enabling reaction outcomes that cannot be achieved under conventional kinetic or thermodynamic control. In this Review, we discuss how ratcheted synthesis is ubiquitous throughout biology and consider how chemists might harness ratchet mechanisms to accelerate catalysis, drive chemical reactions uphill and programme complex reaction sequences.

Programmable catalysis by support polarization: elucidating and breaking scaling relations

The Sabatier principle and the scaling relations have been widely used to search for and screen new catalysts in the field of catalysis. However, these powerful tools can also serve as limitations of catalyst control and breakthrough. To overcome this challenge, this work proposes an efficient method of studying catalyst control by support polarization from first-principles. The results demonstrate that the properties of catalysts are determined by support polarization, irrespective of the magnitude of spontaneous polarization of support. The approach enables elucidating the scaling relations between binding energies at various polarization values of support. Moreover, we observe the breakdown of scaling relations for the surface controlled by support polarization. By studying the surface electronic structure and decomposing the induced charge into contributions from different atoms and orbitals, we identify the inherent structural property of the interface that leads to the breaking of the scaling relations. Specifically, the displacements of the underlying oxide support impose its symmetry on the catalyst, causing the scaling relations between different adsorption sites to break.

Artificial Molecular Ratchets: Tools Enabling Endergonic Processes

Non-equilibrium chemical systems underpin multiple domains of contemporary interest, including supramolecular chemistry, molecular machines, systems chemistry, prebiotic chemistry, and energy transduction. Experimental chemists are now pioneering the realization of artificial systems that can harvest energy away from equilibrium. In this tutorial Review, we provide an overview of artificial molecular ratchets: the chemical mechanisms enabling energy absorption from the environment. By focusing on the mechanism type-rather than the application domain or energy source-we offer a unifying picture of seemingly disparate phenomena, which we hope will foster progress in this fascinating domain of science.

Deep Learning-Assisted Investigation of Electric Field-Dipole Effects on Catalytic Ammonia Synthesis

External electric fields can modify binding energies of reactive surface species and enhance catalytic performance of heterogeneously catalyzed reactions. In this work, we used density functional theory (DFT) calculations-assisted and accelerated by a deep learning algorithm-to investigate the extent to which ruthenium-catalyzed ammonia synthesis would benefit from application of such external electric fields. This strategy allows us to determine which electronic properties control a molecule's degree of interaction with external electric fields. Our results show that (1) field-dependent adsorption/reaction energies are closely correlated to the dipole moments of intermediates over the surface, (2) a positive field promotes ammonia synthesis by lowering the overall energetics and decreasing the activation barriers of the potential rate-limiting steps (e.g., NH2 hydrogenation) over Ru, (3) a positive field (>0.6 V/Å) favors the reaction mechanism by avoiding kinetically unfavorable N≡N bond dissociation over Ru(1013), and (4) local adsorption environments (i.e., dipole moments of the intermediates in the gas phase, surface defects, and surface coverage of intermediates) influence the resulting surface adsorbates' dipole moments and further modify field-dependent reaction energetics. The deep learning algorithm developed here accelerates field-dependent energy predictions with acceptable accuracies by five orders of magnitudes compared to DFT alone and has the capacity of transferability, which can predict field-dependent energetics of other catalytic surfaces with high-quality performance using little training data.

Alumina Graphene Catalytic Condenser for Programmable Solid Acids

Precise control of electron density at catalyst active sites enables regulation of surface chemistry for the optimal rate and selectivity to products. Here, an ultrathin catalytic film of amorphous alumina (4 nm) was integrated into a catalytic condenser device that enabled tunable electron depletion from the alumina active layer and correspondingly stronger Lewis acidity. The catalytic condenser had the following structure: amorphous alumina/graphene/HfO₂ dielectric (70 nm)/p-type Si. Application of positive voltages up to +3 V between graphene and the p-type Si resulted in electrons flowing out of the alumina; positive charge accumulated in the catalyst. Temperature-programmed surface reaction of thermocatalytic isopropanol (IPA) dehydration to propene on the charged alumina surface revealed a shift in the propene formation peak temperature of up to ΔT _peak∼50 °C relative to the uncharged film, consistent with a 16 kJ mol^-1 (0.17 eV) reduction in the apparent activation energy. Electrical characterization of the thin amorphous alumina film by ultraviolet photoelectron spectroscopy and scanning tunneling microscopy indicates that the film is a defective semiconductor with an appreciable density of in-gap electronic states. Density functional theory calculations of IPA binding on the pentacoordinate aluminum active sites indicate significant binding energy changes (ΔBE) up to 60 kJ mol^-1 (0.62 eV) for 0.125 e^- depletion per active site, supporting the experimental findings. Overall, the results indicate that continuous and fast electronic control of thermocatalysis can be achieved with the catalytic condenser device.

Reaction Mechanisms, Kinetics, and Improved Catalysts for Ammonia Synthesis from Hierarchical High Throughput Catalyst Design

The Haber-Bosch (HB) process is the primary chemical synthesis technique for industrial production of ammonia (NH₃) for manufacturing nitrate-based fertilizer and as a potential hydrogen carrier. The HB process alone is responsible for over 2% of all global energy usage to produce more than 160 million tons of NH₃ annually. Iron catalysts are utilized to accelerate the reaction, but high temperatures and pressures of atmospheric nitrogen gas (N₂) and hydrogen gas (H₂) are required. A great deal of research has aimed at increased performance over the last century, but the rate of progress has been slow. This Account focuses on determining the atomic-level reaction mechanism for HB synthesis of NH₃ on the Fe catalysts used in industry and how to use this knowledge to suggest greatly improved catalysts via a novel paradigm of catalyst rational design.We determined the full reaction mechanism on the two most active surfaces for the HB process, Fe(111) and Fe(211)R. We used density functional theory (DFT) to predict the free-energy barriers for all 12 important reactions and the 34 most important 2 × 2 surface configurations. Then we incorporated the mechanism into kinetic Monte Carlo (kMC) simulations run for several hours of real time to predict turnover frequencies (TOFs). The predicted TOFs are within experimental error, indicating that the predicted barriers are within 0.04 eV of experiment.With this level of accuracy, we are poised to use DFT to improve the catalyst. Rather than forming bulk alloys with uniform concentration, we aimed at finding additives that strongly prefer near-surface sites so that minor amounts of the additive might lead to dramatic improvements. However, even for a single additive, the combinations of surface species and reactions multiplies significantly, with ∼48 reaction steps to examine and nearly 100 surface configurations per 2 × 2 site. To make it practical to examine tens of dopant candidates, we developed the hierarchical high-throughput catalysis screening (HHTCS) approach, which we applied to both the Fe(111) and Fe(211) surfaces. For HHTCS, we identified the most important 4 reaction steps out of 12 for the two surfaces to examine >50 dopant cases, where we required performance at each step no worse than for pure Fe. With HHTCS, the computational cost is about 1% of that for doing the full reaction mechanism, allowing us to do ≈50 cases in about 1/2 the time it took to do pure Fe(111). The new leads identified with HHTCS are then validated with full mechanistic studies.For Fe(111), we predict three high-performance dopants that strongly prefer the second layer: Co with a rate 8 times higher, Ni with a rate 16 times higher, and Si with a rate 43 times higher, at 400 °C and 20 atm. We also found four dopants that strongly prefer the top layer and improve performance: Pt or Rh 3 times faster and Pd or Cu 2 times faster. For Fe(211), the best dopant was found to be second-layer Co with a rate 3 times faster than that for the undoped surface.The DFT/kMC data were used to predict reshaping of the catalyst particles under reaction conditions and how to tune dopant content so as to maximize catalytic area and thus activity. Finally, we show how to validate our mechanistic modeling via a comparison between theoretical and experimental operando spectroscopic signatures.