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For: Schena M, Shalon D, Davis RW, Brown PO. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 1995;270:467-70. [PMID: 7569999 DOI: 10.1126/science.270.5235.467] [Citation(s) in RCA: 5091] [Impact Index Per Article: 169.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Number Cited by Other Article(s)
1
Abdel-Hady GN, Hino T, Murakami H, Miwa A, Thi Thuy Cao L, Kuroki T, Nimura-Matsune K, Ikeda T, Ishida T, Funabashi H, Watanabe S, Kuroda A, Hirota R. Laboratory evolution and characterization of nitrate-resistant phosphite dehydrogenase (PtxD) for enhanced cyanobacterial cultivation. J Biotechnol 2025;402:59-68. [PMID: 40086668 DOI: 10.1016/j.jbiotec.2025.03.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2024] [Revised: 02/28/2025] [Accepted: 03/08/2025] [Indexed: 03/16/2025]
2
Phan N, Li Y, Yang M, Liu F. Tear Fluid Derived Extracellular Vesicles for New Biomarker Discovery. Ocul Surf 2025:S1542-0124(25)00062-X. [PMID: 40368029 DOI: 10.1016/j.jtos.2025.05.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2025] [Revised: 04/23/2025] [Accepted: 05/05/2025] [Indexed: 05/16/2025]
3
Mao X, Wang J, Xu J, Xu P, Hu H, Li L, Zhang Z, Song Y. Current diagnosing strategies for Mycobacterium tuberculosis and its drug resistance: a review. J Appl Microbiol 2025;136:lxaf100. [PMID: 40343775 DOI: 10.1093/jambio/lxaf100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2025] [Revised: 04/21/2025] [Accepted: 05/08/2025] [Indexed: 05/11/2025]
4
Zhang Y, Chen Y, Hou C, Wang C, Mu C. Analysis of cDNA microarrays revealed the effects of mating on the ovary and hepatopancreas of female swimming crab (Portunus trituberculatus) during the late stage of ovarian development. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. PART D, GENOMICS & PROTEOMICS 2025;55:101520. [PMID: 40315711 DOI: 10.1016/j.cbd.2025.101520] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2024] [Revised: 04/21/2025] [Accepted: 04/21/2025] [Indexed: 05/04/2025]
5
Singh A, Yasheshwar, Kaushik NK, Kala D, Nagraik R, Gupta S, Kaushal A, Walia Y, Dhir S, Noorani MS. Conventional and cutting-edge advances in plant virus detection: emerging trends and techniques. 3 Biotech 2025;15:100. [PMID: 40151342 PMCID: PMC11937476 DOI: 10.1007/s13205-025-04253-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Accepted: 02/20/2025] [Indexed: 03/29/2025]  Open
6
Kim YK, Ramalho-Santos M. 20 years of stemness: From stem cells to hypertranscription and back. Stem Cell Reports 2025;20:102406. [PMID: 39919752 PMCID: PMC11960510 DOI: 10.1016/j.stemcr.2025.102406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2024] [Revised: 01/08/2025] [Accepted: 01/09/2025] [Indexed: 02/09/2025]  Open
7
Rodov A, Baniadam H, Zeiser R, Amit I, Yosef N, Wertheimer T, Ingelfinger F. Towards the Next Generation of Data-Driven Therapeutics Using Spatially Resolved Single-Cell Technologies and Generative AI. Eur J Immunol 2025;55:e202451234. [PMID: 39964048 PMCID: PMC11834372 DOI: 10.1002/eji.202451234] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2024] [Revised: 01/28/2025] [Accepted: 02/03/2025] [Indexed: 02/21/2025]
8
Hasuike A, Easter QT, Clark D, Byrd KM. Application of Single-Cell Genomics to Animal Models of Periodontitis and Peri-Implantitis. J Clin Periodontol 2025;52:268-279. [PMID: 39695834 PMCID: PMC11743042 DOI: 10.1111/jcpe.14093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2024] [Revised: 11/13/2024] [Accepted: 11/25/2024] [Indexed: 12/20/2024]
9
Liu Y, Rao S, Hoskins I, Geng M, Zhao Q, Chacko J, Ghatpande V, Qi K, Persyn L, Wang J, Zheng D, Zhong Y, Park D, Cenik ES, Agarwal V, Ozadam H, Cenik C. Translation efficiency covariation across cell types is a conserved organizing principle of mammalian transcriptomes. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2024.08.11.607360. [PMID: 39149359 PMCID: PMC11326257 DOI: 10.1101/2024.08.11.607360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 08/17/2024]
10
Ayling K, Vedhara K, Fairclough L. Measuring Vaccine Responses in the Multiplex Era. Methods Mol Biol 2025;2868:149-162. [PMID: 39546230 DOI: 10.1007/978-1-0716-4200-9_9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2024]
11
Rani S, Ramesh V, Khatoon M, Shijili M, Archana CA, Anand J, Sagar N, Sekar YS, Patil AV, Palavesam A, Barman NN, Patil SS, Hemadri D, Suresh KP. Identification of molecular and cellular infection response biomarkers associated with anthrax infection through comparative analysis of gene expression data. Comput Biol Med 2025;184:109431. [PMID: 39556915 DOI: 10.1016/j.compbiomed.2024.109431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2024] [Revised: 10/16/2024] [Accepted: 11/11/2024] [Indexed: 11/20/2024]
12
Fang Z, Peltz G. Twenty-first century mouse genetics is again at an inflection point. Lab Anim (NY) 2025;54:9-15. [PMID: 39592878 PMCID: PMC11695262 DOI: 10.1038/s41684-024-01491-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Accepted: 11/12/2024] [Indexed: 11/28/2024]
13
Baumann A, Ahmadi N, Wolfien M. A Current Perspective of Medical Informatics Developments for a Clinical Translation of (Non-coding)RNAs and Single-Cell Technologies. Methods Mol Biol 2025;2883:31-51. [PMID: 39702703 DOI: 10.1007/978-1-0716-4290-0_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2024]
14
Cipurko D, Ueda T, Mei L, Chevrier N. Repurposing large-format microarrays for scalable spatial transcriptomics. Nat Methods 2025;22:145-155. [PMID: 39562752 PMCID: PMC11984966 DOI: 10.1038/s41592-024-02501-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 10/08/2024] [Indexed: 11/21/2024]
15
Kong W, Li T, Li Y, Zhang L, Xie J, Liu X. Transgenic Cotton Expressing dsAgCYP6CY3 Significantly Delays the Growth and Development of Aphis gossypii by Inhibiting Its Glycolysis and TCA Cycle. Int J Mol Sci 2024;26:264. [PMID: 39796120 PMCID: PMC11720249 DOI: 10.3390/ijms26010264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2024] [Revised: 12/18/2024] [Accepted: 12/26/2024] [Indexed: 01/13/2025]  Open
16
Dong H, Ma B, Meng Y, Wu Y, Liu Y, Zeng T, Huang J. GRNMOPT: Inference of gene regulatory networks based on a multi-objective optimization approach. Comput Biol Chem 2024;113:108223. [PMID: 39340962 DOI: 10.1016/j.compbiolchem.2024.108223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2024] [Revised: 08/21/2024] [Accepted: 09/20/2024] [Indexed: 09/30/2024]
17
Jerald I, Ravindran J, Babu MM. Fish in focus: Navigating organ damage assessment through analytical avenues - A comprehensive review. Toxicol Rep 2024;13:101841. [PMID: 39717851 PMCID: PMC11665677 DOI: 10.1016/j.toxrep.2024.101841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2024] [Revised: 11/16/2024] [Accepted: 11/26/2024] [Indexed: 12/25/2024]  Open
18
Kutchy NA, Morenikeji OB, Memili A, Ugur MR. Deciphering sperm functions using biological networks. Biotechnol Genet Eng Rev 2024;40:3743-3767. [PMID: 36722689 DOI: 10.1080/02648725.2023.2168912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2022] [Indexed: 02/02/2023]
19
Wu J, Koelzer VH. Towards generative digital twins in biomedical research. Comput Struct Biotechnol J 2024;23:3481-3488. [PMID: 39435342 PMCID: PMC11491725 DOI: 10.1016/j.csbj.2024.09.030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2024] [Revised: 09/30/2024] [Accepted: 09/30/2024] [Indexed: 10/23/2024]  Open
20
Tyszka AS, Larson DA, Walker JF. Sequencing historical RNA: unrealized potential to increase understanding of the plant tree of life. TRENDS IN PLANT SCIENCE 2024:S1360-1385(24)00305-4. [PMID: 39613559 DOI: 10.1016/j.tplants.2024.11.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2024] [Revised: 10/22/2024] [Accepted: 11/04/2024] [Indexed: 12/01/2024]
21
Khan B, Qahwaji R, Alfaifi MS, Athar T, Khan A, Mobashir M, Ashankyty I, Imtiyaz K, Alahmadi A, Rizvi MMA. Deciphering molecular landscape of breast cancer progression and insights from functional genomics and therapeutic explorations followed by in vitro validation. Sci Rep 2024;14:28794. [PMID: 39567714 PMCID: PMC11579425 DOI: 10.1038/s41598-024-80455-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2024] [Accepted: 11/19/2024] [Indexed: 11/22/2024]  Open
22
Taub L, Hampton TH, Sarkar S, Doing G, Neff SL, Finger CE, Ferreira Fukutani K, Stanton BA. E.PathDash, pathway activation analysis of publicly available pathogen gene expression data. mSystems 2024;9:e0103024. [PMID: 39422483 PMCID: PMC11575265 DOI: 10.1128/msystems.01030-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2024] [Accepted: 09/20/2024] [Indexed: 10/19/2024]  Open
23
Bahraini M, Fazeli A, Dorgalaleh A. Laboratory Diagnosis of Activated Protein C Resistance and Factor V Leiden. Semin Thromb Hemost 2024;50:1067-1083. [PMID: 37429328 DOI: 10.1055/s-0043-1770773] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/12/2023]
24
Fiorini MR, Dilliott AA, Thomas RA, Farhan SMK. Transcriptomics of Human Brain Tissue in Parkinson's Disease: a Comparison of Bulk and Single-cell RNA Sequencing. Mol Neurobiol 2024;61:8996-9015. [PMID: 38578357 PMCID: PMC11496323 DOI: 10.1007/s12035-024-04124-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Accepted: 03/12/2024] [Indexed: 04/06/2024]
25
Creighton CJ. Clinical proteomics towards multiomics in cancer. MASS SPECTROMETRY REVIEWS 2024;43:1255-1269. [PMID: 36495097 DOI: 10.1002/mas.21827] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
26
Ananth AL, Lopez MA. A review of neurogenetics in fetal and neonatal clinical medicine. Semin Fetal Neonatal Med 2024;29:101550. [PMID: 39551661 DOI: 10.1016/j.siny.2024.101550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2024]
27
Park KH, Lee H, Lee JH, Yon DK, Choi YI, Chung HJ, Jung J, Jeong NY. Unique and Shared Molecular Mechanisms of Alcoholic and Non-Alcoholic Liver Cirrhosis Identified Through Transcriptomics Data Integration. OMICS : A JOURNAL OF INTEGRATIVE BIOLOGY 2024;28:537-547. [PMID: 39417237 DOI: 10.1089/omi.2024.0168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2024]
28
Peña-Martín MC, Marcos-Vadillo E, García-Berrocal B, Heredero-Jung DH, García-Salgado MJ, Lorenzo-Hernández SM, Larrue R, Lenski M, Drevin G, Sanz C, Isidoro-García M. A Comparison of Molecular Techniques for Improving the Methodology in the Laboratory of Pharmacogenetics. Int J Mol Sci 2024;25:11505. [PMID: 39519058 PMCID: PMC11546559 DOI: 10.3390/ijms252111505] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2024] [Revised: 10/20/2024] [Accepted: 10/24/2024] [Indexed: 11/16/2024]  Open
29
Cunningham AG, Gorospe M. Striving for clarity in language about gene expression. Nucleic Acids Res 2024;52:10747-10753. [PMID: 39271127 PMCID: PMC11472038 DOI: 10.1093/nar/gkae764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2024] [Revised: 08/15/2024] [Accepted: 08/21/2024] [Indexed: 09/15/2024]  Open
30
Alkhateeb MA, Aljarba NH, Yousafi Q, Anwar F, Biswas P. Elucidating gastric cancer mechanisms and therapeutic potential of Adociaquinone A targeting EGFR: A genomic analysis and Computer Aided Drug Design (CADD) approach. J Cell Mol Med 2024;28:e70133. [PMID: 39434198 PMCID: PMC11493557 DOI: 10.1111/jcmm.70133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Revised: 05/05/2024] [Accepted: 09/09/2024] [Indexed: 10/23/2024]  Open
31
So KWL, Su Z, Cheung JPY, Choi SW. Single-Cell Analysis of Bone-Marrow-Disseminated Tumour Cells. Diagnostics (Basel) 2024;14:2172. [PMID: 39410576 PMCID: PMC11475990 DOI: 10.3390/diagnostics14192172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Revised: 09/17/2024] [Accepted: 09/18/2024] [Indexed: 10/20/2024]  Open
32
Pfeiffer P, Nilsson J, Gallud A, Baladi T, Le HN, Bood M, Lemurell M, Dahlén A, Grøtli M, Esbjörner E, Wilhelmsson L. Metabolic RNA labeling in non-engineered cells following spontaneous uptake of fluorescent nucleoside phosphate analogues. Nucleic Acids Res 2024;52:10102-10118. [PMID: 39162218 PMCID: PMC11417403 DOI: 10.1093/nar/gkae722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 07/04/2024] [Accepted: 08/07/2024] [Indexed: 08/21/2024]  Open
33
Subhashini N, Kerler Y, Menger MM, Böhm O, Witte J, Stadler C, Griberman A. Enhancing Colorimetric Detection of Nucleic Acids on Nitrocellulose Membranes: Cutting-Edge Applications in Diagnostics and Forensics. BIOSENSORS 2024;14:430. [PMID: 39329805 PMCID: PMC11429540 DOI: 10.3390/bios14090430] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2024] [Revised: 08/30/2024] [Accepted: 08/30/2024] [Indexed: 09/28/2024]
34
Ashraf MA, Raza MA, Amjad MN, Ud Din G, Yue L, Shen B, Chen L, Dong W, Xu H, Hu Y. A comprehensive review of influenza B virus, its biological and clinical aspects. Front Microbiol 2024;15:1467029. [PMID: 39296301 PMCID: PMC11408344 DOI: 10.3389/fmicb.2024.1467029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2024] [Accepted: 08/22/2024] [Indexed: 09/21/2024]  Open
35
Pavlou A, Mulenge F, Gern OL, Busker LM, Greimel E, Waltl I, Kalinke U. Orchestration of antiviral responses within the infected central nervous system. Cell Mol Immunol 2024;21:943-958. [PMID: 38997413 PMCID: PMC11364666 DOI: 10.1038/s41423-024-01181-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2024] [Accepted: 05/05/2024] [Indexed: 07/14/2024]  Open
36
Zhu G, Wang X, Wang Y, Huang T, Zhang X, He J, Shi N, Chen J, Zhang J, Zhang M, Li J. Comparative transcriptomic study on the ovarian cancer between chicken and human. Poult Sci 2024;103:104021. [PMID: 39002367 PMCID: PMC11298922 DOI: 10.1016/j.psj.2024.104021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Revised: 06/05/2024] [Accepted: 06/19/2024] [Indexed: 07/15/2024]  Open
37
Khaledi M, Khatami M, Hemmati J, Bakhti S, Hoseini SA, Ghahramanpour H. Role of Small Non-Coding RNA in Gram-Negative Bacteria: New Insights and Comprehensive Review of Mechanisms, Functions, and Potential Applications. Mol Biotechnol 2024:10.1007/s12033-024-01248-w. [PMID: 39153013 DOI: 10.1007/s12033-024-01248-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2024] [Accepted: 08/02/2024] [Indexed: 08/19/2024]
38
Sato Y. Transcriptome analysis: a powerful tool to understand individual microbial behaviors and interactions in ecosystems. Biosci Biotechnol Biochem 2024;88:850-856. [PMID: 38749545 DOI: 10.1093/bbb/zbae064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2024] [Accepted: 05/06/2024] [Indexed: 07/23/2024]
39
Wen Y, Yang H, Hong Y. Transcriptomic Approaches to Cardiomyocyte-Biomaterial Interactions: A Review. ACS Biomater Sci Eng 2024;10:4175-4194. [PMID: 38934720 DOI: 10.1021/acsbiomaterials.4c00303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/28/2024]
40
Kazmi SSUH, Tayyab M, Pastorino P, Barcelò D, Yaseen ZM, Grossart HP, Khan ZH, Li G. Decoding the molecular concerto: Toxicotranscriptomic evaluation of microplastic and nanoplastic impacts on aquatic organisms. JOURNAL OF HAZARDOUS MATERIALS 2024;472:134574. [PMID: 38739959 DOI: 10.1016/j.jhazmat.2024.134574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Revised: 04/30/2024] [Accepted: 05/08/2024] [Indexed: 05/16/2024]
41
Ramos YFM, Rice SJ, Ali SA, Pastrello C, Jurisica I, Rai MF, Collins KH, Lang A, Maerz T, Geurts J, Ruiz-Romero C, June RK, Thomas Appleton C, Rockel JS, Kapoor M. Evolution and advancements in genomics and epigenomics in OA research: How far we have come. Osteoarthritis Cartilage 2024;32:858-868. [PMID: 38428513 DOI: 10.1016/j.joca.2024.02.656] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 01/29/2024] [Accepted: 02/25/2024] [Indexed: 03/03/2024]
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Rolando JC, Melkonian AV, Walt DR. The Present and Future Landscapes of Molecular Diagnostics. ANNUAL REVIEW OF ANALYTICAL CHEMISTRY (PALO ALTO, CALIF.) 2024;17:459-474. [PMID: 38360553 DOI: 10.1146/annurev-anchem-061622-015112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
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Adamer MF, Brüningk SC, Chen D, Borgwardt K. Biomarker identification by interpretable maximum mean discrepancy. Bioinformatics 2024;40:i501-i510. [PMID: 38940158 PMCID: PMC11211810 DOI: 10.1093/bioinformatics/btae251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/29/2024]  Open
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Roy SD, Ramasamy S, Obbineni JM. An evaluation of nucleic acid-based molecular methods for the detection of plant viruses: a systematic review. Virusdisease 2024;35:357-376. [PMID: 39071869 PMCID: PMC11269559 DOI: 10.1007/s13337-024-00863-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Accepted: 04/15/2024] [Indexed: 07/30/2024]  Open
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Bonilla DA, Orozco CA, Forero DA, Odriozola A. Techniques, procedures, and applications in host genetic analysis. ADVANCES IN GENETICS 2024;111:1-79. [PMID: 38908897 DOI: 10.1016/bs.adgen.2024.05.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/24/2024]
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Procopio N, Bonicelli A. From flesh to bones: Multi-omics approaches in forensic science. Proteomics 2024;24:e2200335. [PMID: 38683823 DOI: 10.1002/pmic.202200335] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2023] [Revised: 03/12/2024] [Accepted: 03/26/2024] [Indexed: 05/02/2024]
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Mani K, Rajaguru H. A framework for performance enhancement of classifiers in detection of prostate cancer from microarray gene. Heliyon 2024;10:e29630. [PMID: 38720727 PMCID: PMC11076651 DOI: 10.1016/j.heliyon.2024.e29630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Revised: 03/26/2024] [Accepted: 04/11/2024] [Indexed: 05/12/2024]  Open
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Guan Q, Yan X, Wu Y, Zhou D, Hu J. Biclustering analysis on tree-shaped time-series single cell gene expression data of Caenorhabditis elegans. BMC Bioinformatics 2024;25:183. [PMID: 38724908 PMCID: PMC11080145 DOI: 10.1186/s12859-024-05800-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2024] [Accepted: 05/01/2024] [Indexed: 05/13/2024]  Open
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Barreiro C, Albillos SM, García-Estrada C. Penicillium chrysogenum: Beyond the penicillin. ADVANCES IN APPLIED MICROBIOLOGY 2024;127:143-221. [PMID: 38763527 DOI: 10.1016/bs.aambs.2024.02.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2024]
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Rentzsch P, Kollotzek A, Mohammadi P, Lappalainen T. Recalibrating differential gene expression by genetic dosage variance prioritizes functionally relevant genes. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.10.588830. [PMID: 38645217 PMCID: PMC11030425 DOI: 10.1101/2024.04.10.588830] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/23/2024]
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