1
|
Wang J, He M, Cao T, Zhu S. Pyrone Isomerization Enabled Divergent Access to Multisubstituted Biaryl Phenol via Relay Claisen Rearrangement. Org Lett 2025; 27:4865-4869. [PMID: 40310990 DOI: 10.1021/acs.orglett.5c01077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2025]
Abstract
Arene isomerization can simultaneously edit the arene backbone and its periphery, thereby bridging the independent chemistry of two distinct arenes. Herein, a facile pyrone isomerization approach for the divergent synthesis of five- and sixfold-substituted biaryl phenols is achieved by using a relay Claisen rearrangement as a crucial step. This catalyst-free isomerization reaction features high step, atom, and redox economy by transferring the innate oxidation state of pyrone into the biaryl phenols. Additionally, an intriguing self-activation phenomenon was observed, which enabled the selective dienone-phenol rearrangement of the aryl group.
Collapse
Affiliation(s)
- Jialin Wang
- Key Lab of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China
| | - Mingluo He
- Key Lab of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China
| | - Tongxiang Cao
- Key Lab of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China
| | - Shifa Zhu
- Key Lab of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China
| |
Collapse
|
2
|
Kim SF, Amber C, Bartholomew GL, Sarpong R. Skeletal Editing Strategies Driven by Total Synthesis. Acc Chem Res 2025. [PMID: 40373286 DOI: 10.1021/acs.accounts.5c00174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/17/2025]
Abstract
ConspectusSingle-atom skeletal editing strategies that precisely modify the core frameworks of molecules have the potential to streamline and accelerate organic synthesis by enabling conceptually simple, but otherwise synthetically challenging, retrosynthetic disconnections. In contrast to broader skeletal remodeling and rearrangement strategies, these methodologies more specifically target single-atom changes with high selectivity, even within complex molecules such as natural products or pharmaceuticals. For the past several years, our laboratory has developed several skeletal editing methodologies, including single-atom ring contractions, expansions, and transpositions of both saturated and unsaturated heterocycles, as well as other carbon scaffolds. This Account details the evolution of "skeletal editing logic" within the context of our extensive work on natural product total synthesis.Early work in the Sarpong group leveraged metal-mediated C-C bond cleavage of in situ-generated strained intermediates to accomplish total syntheses of natural products, such as the icetexane diterpenoids and cyathane diterpenes. Continuing our focus on leveraging C-C bond cleavage through "break-it-to-make-it" strategies, we then developed carvone remodeling strategies to access a variety of terpenoids (including longiborneol sesquiterpenoids, phomactins, and xishacorenes) from hydroxylated pinene derivatives. In applying this skeletal remodeling and C-C cleavage framework to alkaloid natural products, such as the preparaherquimides and lycodine-type alkaloids, we recognized that single-atom changes to the saturated nitrogen-containing rings within these natural products would enable the direct conversion between distinct but structurally related natural product families. Thus, we began developing methods that selectively modify the core frameworks of N-heterocycles; this focus led to our work on the deconstructive fluorination and diversification of piperidines and ultimately to our recent body of work on direct, single-atom core framework modifications (single-atom skeletal editing). In the context of saturated heterocycles, we developed photomediated enantioselective ring contractions of α-acylated motifs and reductive ring contractions of cyclic hydroxylamines. For unsaturated heterocycles, we have developed ring contractions of azines (e.g., pyrimidine to pyrazole), 15N isotopic labeling of azines, and phototranspositions of indazoles to benzimidazoles. To direct our focus on reaction development, a cheminformatic analysis of heteroaromatic skeletal edits served to quantitatively inform which transformations would most significantly expand the accessible chemical space. Apart from heterocycles, we also reported single-nitrogen insertion through the reductive amination of carbonyl C-C bonds. Ultimately, the goal of this research is to develop mild and selective skeletal editing methodologies that can be applied to total synthesis and organic synthesis more generally. While recent total syntheses from our group have targeted simplified retrosyntheses through single-atom skeletal editing logic (e.g., daphenylline and harringtonolide), multiple steps were still required to achieve the formal desired "edit". As such, the continued development of truly single-step, mild, and selective reactions that can edit the cores of highly complex molecules remains highly desirable.
Collapse
Affiliation(s)
- Sojung F Kim
- Department of Chemistry, University of California-Berkeley, Berkeley, California 94720, United States
| | - Charis Amber
- Department of Chemistry, University of California-Berkeley, Berkeley, California 94720, United States
| | - G Logan Bartholomew
- Department of Chemistry, University of California-Berkeley, Berkeley, California 94720, United States
| | - Richmond Sarpong
- Department of Chemistry, University of California-Berkeley, Berkeley, California 94720, United States
| |
Collapse
|
3
|
Al-Ahmad R, Dai M. Advancing Total Synthesis Through Skeletal Editing. Acc Chem Res 2025; 58:1392-1406. [PMID: 40209068 PMCID: PMC12060283 DOI: 10.1021/acs.accounts.5c00030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2025] [Revised: 03/15/2025] [Accepted: 03/19/2025] [Indexed: 04/12/2025]
Abstract
ConspectusTotal synthesis has long been a proving ground for advancing chemical thought, pushing chemists to develop strategies that not only replicate nature's complexity but often surpass it. The pursuit of efficiency, practicality, and elegance continues to challenge and reshape the guiding principles of total synthesis. In recent years, skeletal editing has emerged as a powerful strategy for reconfiguring skeletal frameworks in ways that were previously difficult to imagine. Unlike conventional chemical synthesis approaches, which primarily rely on the logic of bond construction reactions and functional group manipulations, skeletal editing introduces elements that allow for atom insertion, deletion, and exchange and skeletal rearrangement/reorganization by harnessing the potential energy and reactivity of certain structural motifs and morphing them into new electronic and spatial configurations. The logic of modern skeletal editing has been fueling the development of new editing methods and advancing the fields of total synthesis, medicinal chemistry, materials science, and others.In this Account, we detail our program using skeletal editing-based retrosynthetic logic to facilitate natural product synthesis. We first highlight two one-carbon insertion editing strategies utilizing the Ciamician-Dennstedt rearrangement and the Büchner-Curtius-Schlotterbeck ring expansion to streamline the total syntheses of complanadine and phleghenrine Lycopodium alkaloids. We next present our synthesis of crinipellin and gibberellin diterpenes by leveraging the facile synthesis and intrinsic strain of cyclobutanes as precursors to challenging cyclopentanes via cut-and-insert editing (crinipellins) or C-C bond migratory ring expansion (GA18). Toward the end, we describe our early efforts in orchestrating structural rearrangement and functional group pairing reactions to access seven monoterpene indole alkaloids and highlight the divergent potential of skeletal editing. Each of the five examples follows a build-edit-decorate workflow, inspired by Schreiber's build-couple-pair in diversity-oriented synthesis. In the build stage, key scaffolds are efficiently assembled from starting materials with matched reactivity. The edit stage morphs these scaffolds to the desired but more challenging ones encoded by the target molecules, reminiscent of Corey's application of rearrangement transforms as a topological strategy. The decorate stage introduces additional functional groups and adjusts oxidation states to complete the total synthesis, similar to the oxidase phase of Baran's two-phase synthesis. The essence of skeletal editing-based retrosynthetic analysis is to identify latent structural relationships between the readily assembled key scaffolds constructed in the build stage and the desired ones encoded by the target molecules as well as proper editing methods to transform the former into the latter with precision. The build-edit-decorate approach parallels the dynamism of biosynthesis, enabling rapid building of complexity with great efficiency and step economy, as analyzed by the spacial scores (SPS) of each case. Drawing on these principles, chemists can adopt skeletal editing-based retrosynthetic logic by identifying latent intermediates and employing and developing strategic editing methods to overcome synthetic bottlenecks.
Collapse
Affiliation(s)
- Reem Al-Ahmad
- Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Mingji Dai
- Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| |
Collapse
|
4
|
Tan TD, Zhou F, Quirion KP, Wang YQ, Ng DZW, Luo X, Chan ECY, Liu P, Koh MJ. Catalytic difluorocarbene insertion enables access to fluorinated oxetane isosteres. Nat Chem 2025; 17:719-726. [PMID: 39979412 DOI: 10.1038/s41557-024-01730-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Accepted: 12/19/2024] [Indexed: 02/22/2025]
Abstract
Skeletal editing of heterocyclic building blocks offers an appealing way to expand the accessible chemical space by diversifying molecular scaffolds for drug discovery. Despite the recent boom in this area, catalytic strategies that directly introduce fluorine into the backbone of small-ring heterocycles remain rare owing to the challenges of strain-induced ring cleavage and defluorination. Here we describe a copper-catalysed approach for skeletal expansion of oxygen heterocycles by reaction with a difluorocarbene species generated in situ to induce carbon atom insertion. The α,α-difluoro-oxetane products are potential surrogates of oxetane, β-lactone and carbonyl pharmacophores on the basis of their computed molecular properties and electrostatic potential maps. The utility of this approach is highlighted by synthesis of various drug-like molecules and fluorinated isosteres of biologically active compounds. Experimental and computational investigations provide insight into the mechanism and the unique role of the copper catalyst in promoting both ring-opening and cyclization steps of the reaction.
Collapse
Affiliation(s)
- Tong-De Tan
- Department of Chemistry, National University of Singapore, Singapore, Singapore
| | - Fang Zhou
- Department of Chemistry, National University of Singapore, Singapore, Singapore
| | - Kevin P Quirion
- Department of Chemistry, University of Pittsburgh, Pittsburgh, PA, USA
| | - Yu-Qi Wang
- Department of Chemistry, National University of Singapore, Singapore, Singapore
| | - Daniel Zhi Wei Ng
- Department of Pharmacy and Pharmaceutical Sciences, National University of Singapore, Singapore, Singapore
| | - Xiaohua Luo
- Department of Chemistry, National University of Singapore, Singapore, Singapore
| | - Eric Chun Yong Chan
- Department of Pharmacy and Pharmaceutical Sciences, National University of Singapore, Singapore, Singapore.
| | - Peng Liu
- Department of Chemistry, University of Pittsburgh, Pittsburgh, PA, USA.
| | - Ming Joo Koh
- Department of Chemistry, National University of Singapore, Singapore, Singapore.
| |
Collapse
|
5
|
Zeng G, Fu Z, Yin B, Huang L. Visible Light-Induced Single-Atom Insertion of Indenes via Aerobic Ring Scission-Condensation-Rearomatization. Chemistry 2025; 31:e202403828. [PMID: 40098588 DOI: 10.1002/chem.202403828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2025] [Revised: 03/15/2025] [Accepted: 03/17/2025] [Indexed: 03/19/2025]
Abstract
In this study, we present a photocatalyzed single-atom insertion of indenes, involving an aerobic ring scission into dicarbonyl intermediates, which subsequently undergo condensation and rearomatization to efficiently synthesize isoquinoline and naphthalene derivatives. The use of an inexpensive organic dye as the photocatalyst under aerobic conditions with cheap ammonium acetate (NH4OAc) as the nitrogen source makes this method very practical and environmentally friendly to access isoquinoline. Alternatively, an intramolecular carbon-atom-insertion process, involving the Aldol reaction of the dicarbonyl intermediates, affords the naphthalenamine and naphthalen-2-ol derivatives. Mechanistic studies support that the superoxide anion radical species mediates the C═C double bond scission of indenes rather than the singlet oxygen intermediate.
Collapse
Affiliation(s)
- Guohui Zeng
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
| | - Zeyuan Fu
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
| | - Biaolin Yin
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
| | - Liangbin Huang
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
| |
Collapse
|
6
|
Fanourakis A, Ali Y, Chen L, Kelly PQ, Bracken AJ, Kelly CB, Levin MD. Strategic atom replacement enables regiocontrol in pyrazole alkylation. Nature 2025; 641:646-652. [PMID: 40179959 DOI: 10.1038/s41586-025-08951-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2025] [Accepted: 03/27/2025] [Indexed: 04/05/2025]
Abstract
Pyrazoles are heterocycles commonly found as key substructures in agrochemicals and medicinally active compounds alike1,2. Despite their pervasiveness, established methods fall notably short in delivering complex pyrazoles selectively due to issues of differentiation during either assembly or N-functionalization3. This is a direct consequence of a dominant synthetic strategy that attempts to control selectivity-determining bonds between poorly differentiated starting materials. To overcome this longstanding challenge, we here describe a prototypical example of an alternative conceptual approach, 'strategic atom replacement', in which we synthesize N-alkyl pyrazoles from isothiazoles. The net forward transformation is a 'swap' of the isothiazole sulfur atom with a nitrogen atom and its associated alkyl fragment to deliver the alkylated pyrazole4,5. Linking the two azoles is an orphaned heterocycle class, 1,2,3-thiadiazine-S-oxides, whose synthetic potential has yet to be tapped6. By proceeding through these unusual heterocycles, the typical selectivity and separation challenges associated with exclusively bond-based pyrazole preparations are circumvented, and even minimally differentiated peripheral substituents can be discriminated to afford isomerically pure products.
Collapse
Affiliation(s)
| | - Yahia Ali
- Department of Chemistry, University of Chicago, Chicago, IL, USA
| | - Liao Chen
- Department of Chemistry, University of Chicago, Chicago, IL, USA
| | - Patrick Q Kelly
- Department of Chemistry, University of Chicago, Chicago, IL, USA
| | | | - Christopher B Kelly
- Discovery Process Research, Johnson & Johnson Innovative Medicine, Spring House, PA, USA.
| | - Mark D Levin
- Department of Chemistry, University of Chicago, Chicago, IL, USA.
| |
Collapse
|
7
|
Cui FH, Gao LH, Ruan K, Li F, Meng M, Ma K, Lu Z, Fei J, Tian H, Liu LL, Lin YM, Xia H. Fusion of Four Aromatic Rings via an Atom-Mutual-Embedding Strategy to Form a Tetrahexacyclic System. J Am Chem Soc 2025; 147:13601-13609. [PMID: 40227147 DOI: 10.1021/jacs.5c00697] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/15/2025]
Abstract
Skeletal manipulation of aromatic compounds has emerged as a potent tool in synthetic chemistry, but simultaneous multiring manipulation remains largely unexplored due to the inherent complexities of ring and site selectivity. Herein, we report an unprecedented multiring skeletal manipulation that fuses four 5-membered aromatic rings, comprising two organic and two metal-containing aromatic systems, into a novel metal-bridged 6/6/6/6-membered ring scaffold. The sequential ring fusion is accomplished through an atom-mutual-embedding strategy; this strategy entails the stepwise insertion of two nitrogen atoms into separate metal-carbon bonds and simultaneously integrates a metal atom as a bridge across two isoxazole moieties. The presence of a central metal atom is crucial for ensuring precise substrate alignment and enhancing both the ring and site specificity. The resulting tetrahexacyclic products exhibit remarkable stability and superior near-infrared (NIR) functional properties, surpassing those of the precursor compounds. This work not only establishes a conceptual foundation for designing versatile substrate molecules amenable to intricate editing but also contributes to the rational and performance-targeted manipulation of molecular architectures.
Collapse
Affiliation(s)
- Fei-Hu Cui
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources, School of Chemistry and Pharmaceutical Sciences, Guangxi Normal University, Guilin 541004, China
| | - Le-Han Gao
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
| | - Kaidong Ruan
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
| | - Fei Li
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
| | - Meng Meng
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
| | - Kexin Ma
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
| | - Zhengyu Lu
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
| | - Jiawei Fei
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
| | - Huayu Tian
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
| | - Liu Leo Liu
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
| | - Yu-Mei Lin
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
| | - Haiping Xia
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
| |
Collapse
|
8
|
Zhang Y, Han F, Yin Z, Cai Y, Zhang X, Zhang H. Fluorescent pyridine phosphonium salts via transmutation of metallabenzenes. Nat Commun 2025; 16:3632. [PMID: 40240770 PMCID: PMC12003804 DOI: 10.1038/s41467-025-58855-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2024] [Accepted: 03/31/2025] [Indexed: 04/18/2025] Open
Abstract
Metallabenzenes are recognized as a unique class of aromatic compounds, not only of structural and theoretical interest but also as platforms to design powerful transformations. Here, we report the successful transmutation of a metallabenzene for pyridine synthesis. This 'metal-to-nitrogen swapping' process utilizes readily available ruthenabenzene phosphonium salts and commercially available 2-aminopyridines under mild conditions. The isolation of ruthena-azepines, containing a planar seven-membered aza-metallacycle, along with DFT calculations, supports the nitrogen insertion/metal deletion cascade driven by aromatization. Additionally, we investigate the tunable photophysical properties of the resulting pyridine phosphonium salts.
Collapse
Affiliation(s)
- Yaowei Zhang
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, China
| | - Feifei Han
- School of Chemical Engineering, Dalian University of Technology, Dalian, China
| | - Zhihong Yin
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, China
| | - Yapeng Cai
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, China
| | - Xiaoyan Zhang
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, China
| | - Hong Zhang
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, China.
| |
Collapse
|
9
|
Liu LJ, Tian MY, Lang ZY, Wang YL, He CY, Chen YZ, Han WY. Indole-Quinoline Transmutation Enabled by a Formal Rhodium Carbynoid. Angew Chem Int Ed Engl 2025:e202501966. [PMID: 40207390 DOI: 10.1002/anie.202501966] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2025] [Revised: 04/09/2025] [Accepted: 04/09/2025] [Indexed: 04/11/2025]
Abstract
Skeleton editing is an emerging and powerful tool in organic chemistry because it can simplify synthetic procedures towards complex molecules. Herein, we present an approach for indole-quinoline transmutation through rhodium-catalyzed single-carbon insertion into the C2(sp2)─C3(sp2) bond of an indole with an α-diazotrifluoroethyl sulfonium salt that we developed. This protocol involves a formal trifluoromethyl rhodium carbynoid (CF3C+ = Rh) resembling a trifluoromethyl cationic carbyne (CF3C+:), allowing facile access to an array of quinolines in moderate to high yields. Potential applications in the late-stage skeletal editing of pharmaceutical and natural product derivatives, preparation of adapalene analogs, scaled-up synthesis, and transformations of products are highlighted. Finally, a computational study was conducted to support the envisioned mechanism.
Collapse
Affiliation(s)
- Lu-Jie Liu
- Guizhou Provincial Key Laboratory of Innovation and Manufacturing for Pharmaceuticals, School of Pharmacy, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
| | - Meng-Yang Tian
- Guizhou Provincial Key Laboratory of Innovation and Manufacturing for Pharmaceuticals, School of Pharmacy, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
| | - Zhi-Yu Lang
- Guizhou Provincial Key Laboratory of Innovation and Manufacturing for Pharmaceuticals, School of Pharmacy, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
| | - Yong-Li Wang
- Guizhou Provincial Key Laboratory of Innovation and Manufacturing for Pharmaceuticals, School of Pharmacy, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
| | - Chun-Yang He
- Guizhou Provincial Key Laboratory of Innovation and Manufacturing for Pharmaceuticals, School of Pharmacy, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
- Key Laboratory of Basic Pharmacology of Ministry of Education and Joint International Research Laboratory of Ethnomedicine of Ministry of Education, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
| | - Yong-Zheng Chen
- Guizhou Provincial Key Laboratory of Innovation and Manufacturing for Pharmaceuticals, School of Pharmacy, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
- Key Laboratory of Basic Pharmacology of Ministry of Education and Joint International Research Laboratory of Ethnomedicine of Ministry of Education, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
| | - Wen-Yong Han
- Guizhou Provincial Key Laboratory of Innovation and Manufacturing for Pharmaceuticals, School of Pharmacy, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
- Key Laboratory of Basic Pharmacology of Ministry of Education and Joint International Research Laboratory of Ethnomedicine of Ministry of Education, Zunyi Medical University, No. 6 West Xuefu Rd., Zunyi, 563006, China
| |
Collapse
|
10
|
Zhang Y, Lu H, Chang J, Xu PF, Li H, Jin Y, Wei H. Direct Conversion of Aromatic Lactones into Bioisosteres by Carbonyl-to-Boranol Exchange. Angew Chem Int Ed Engl 2025:e202500921. [PMID: 40193063 DOI: 10.1002/anie.202500921] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2025] [Revised: 04/06/2025] [Accepted: 04/07/2025] [Indexed: 04/15/2025]
Abstract
Bioisosteric replacement is an important strategy in drug discovery and is commonly practiced in medicinal chemistry; however, the incorporation of bioisosteres typically requires laborious multistep de novo synthesis. The direct conversion of a functional group into its corresponding bioisostere is of particular significance in evaluating structure-property relationships. Herein, we report a functional-group-exchange strategy that enables the direct conversion of aromatic lactones, a prevalent motif in bioactive molecules, into their corresponding cyclic hemiboronic acid bioisosteres. Scope evaluation and product derivatization experiments demonstrate the synthetic value and broad functional-group compatibility of this strategy, while the application of this methodology to the rapid remodeling of chromenone cores in bioactive molecules highlights its utility.
Collapse
Affiliation(s)
- Yu Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Hong Lu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Jie Chang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Peng-Fei Xu
- State Key Laboratory of Applied Organic Chemistry College of Chemistry and Chemical Engineering, Lanzhou University, Lanzhou, 730000, China
| | - Hang Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Yuan Jin
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Hao Wei
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| |
Collapse
|
11
|
Bartholomew GL, Karas LJ, Eason RM, Yeung CS, Sigman MS, Sarpong R. Cheminformatic Analysis of Core-Atom Transformations in Pharmaceutically Relevant Heteroaromatics. J Med Chem 2025; 68:6027-6040. [PMID: 40053676 DOI: 10.1021/acs.jmedchem.4c02839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2025]
Abstract
Heteroaromatics are the basis for many pharmaceuticals. The ability to modify these structures through selective core-atom transformations, or "skeletal edits", can dramatically expand the landscape for drug discovery and development. However, despite the importance of core-atom modifications, the quantitative impact of such transformations on accessible chemical space remains undefined. Here, we report a cheminformatic platform to analyze which skeletal edits would most increase access to novel chemical space. This study underscores the significance of emerging single and multiple core-atom transformations of heteroaromatics in enhancing chemical diversity, for example, at a late-stage of a drug discovery campaign. Our findings provide a quantitative framework for prioritizing core-atom modifications in heteroaromatic structural motifs, calling for the development of new methods to achieve these types of transformations.
Collapse
Affiliation(s)
- G Logan Bartholomew
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
| | - Lucas J Karas
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| | - Reilly M Eason
- Modeling & Informatics, Merck & Co., Inc., Boston, Massachusetts 02115, United States
| | - Charles S Yeung
- Discovery Chemistry, Merck & Co., Inc., Boston, Massachusetts 02115, United States
| | - Matthew S Sigman
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| | - Richmond Sarpong
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
| |
Collapse
|
12
|
Hsu H, Kang S, Chen C, Sk MR, Thomas AA. Functionalization of Pyridines at the C4 Position via Metalation and Capture. Angew Chem Int Ed Engl 2025; 64:e202424172. [PMID: 39752240 PMCID: PMC11933531 DOI: 10.1002/anie.202424172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2024] [Indexed: 01/18/2025]
Abstract
The functionalization of pyridines at positions remote to the N-atom remains an outstanding problem in organic synthesis. The inherent challenges associated with overriding the influence of the embedded N-atom within pyridines was overcome using n-butylsodium, which provided an avenue to deprotonate and functionalize the C4-position over traditionally observed addition products that are formed with organolithium bases. In this work, we show that freshly generated 4-sodiopyrdines could undergo transition metal free alkylation reactions directly with a variety of primary alkyl halides bearing diverse functional groups. In addition, after transmetalation to zinc chloride a simple and efficient Negishi cross-coupling protocol was formulated for a variety of aromatic and heteroaromatic halides. The robustness of this protocol was demonstrated through the late-stage installation of 4-pyridyl fragments into a variety of complex active pharmaceutical ingredients including loratadine and prochlorperazine. Furthermore, through rapid injection NMR investigations, we are able to directly observe the evolution of anionic intermediates and determined that two distinct mechanistic pathways lead to the observed site selectivity: (1) the C4-H within 2,6-disubstituted pyridines could be removed directly and (2) the C4 selectivity of unsubstituted pyridine originates from the intermolecular exchange of metalation sites via a thermodynamic pathway.
Collapse
Affiliation(s)
- Han‐Hsiang Hsu
- Department of ChemistryTexas A&M UniversityPO Box 30012College StationTX 77842-30012
| | - Seokmin Kang
- Department of ChemistryTexas A&M UniversityPO Box 30012College StationTX 77842-30012
| | - Cheng‐Chun Chen
- Department of ChemistryTexas A&M UniversityPO Box 30012College StationTX 77842-30012
| | - Md Raja Sk
- Department of ChemistryTexas A&M UniversityPO Box 30012College StationTX 77842-30012
| | - Andy A. Thomas
- Department of ChemistryTexas A&M UniversityPO Box 30012College StationTX 77842-30012
| |
Collapse
|
13
|
Lu H, Chang J, Wei H. Transition Metal-Catalyzed Nitrogen Atom Insertion into Carbocycles. Acc Chem Res 2025; 58:933-946. [PMID: 40008653 DOI: 10.1021/acs.accounts.4c00854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2025]
Abstract
ConspectusN-Heterocycles are essential in pharmaceutical engineering, materials science, and synthetic chemistry. Recently, skeletal editing, which involves making specific point changes to the core of a molecule through single-atom insertion, deletion, or transmutation, has gained attention for its potential to modify complex substrates. In this context, the insertion of nitrogen atoms into carbocycles to form N-heterocycles has emerged as a significant research focus in modern synthetic chemistry owing to its novel synthetic logic. This distinctive retrosynthetic approach enables late-stage modification of molecular skeletons and provides a different pathway for synthesizing multiply substituted N-heterocycles. Nevertheless, nitrogen atom insertion into carbocycles has proven challenging because of the inherent inertness of carbon-based skeletons and difficulty in cleaving C-C bonds. Therefore, selective insertion of nitrogen atoms for skeletal editing remains a challenging and growing field in synthetic chemistry. This Account primarily highlights the contributions of our laboratory to this active field and acknowledges the key contributions from other researchers. It is organized into two sections based on the type of the carbocycle. The first section explores the insertion of nitrogen atoms into cycloalkenes. Recent Co-catalyzed oxidative azidation strategies have enabled nitrogen atom insertion into cyclobutenes, cyclopentenes, and cyclohexenes, facilitating the synthesis of polysubstituted pyridines, which has been conventionally challenging through pyridine cross-coupling. The subsequent section highlights our discovery in the realm of nitrogen atom insertion into arenes. The site-selective skeletal editing of stable arenes is challenging in synthetic chemistry. We developed a method for the intramolecular insertion of nitrogen atoms into the benzene rings of 2-amino biaryls by suppressing the competing C-H insertion process by using a paddlewheel dirhodium catalyst. In addition, to address the challenging site-selective issues in nitrogen atom insertion, we employed arenols as substrates, which could act as selective controlling elements in site-selective skeletal editing. We reported a Cu-catalyzed nitrogen atom insertion into arenols, which proceeds through a dearomative azidation/aryl migration process, enabling the site-selective incorporation of nitrogen atoms into arenes. Inspired by this result, we recently extended the reaction model by using a Fe-catalyst to facilitate the ring contraction of the nitrogen-inserted product, achieving the carbon-to-nitrogen transmutation of arenols. Various complex polyaromatic arenols could effectively undergo the desired atom's transmutation, presenting considerable potential for various applications in materials chemistry. In this Account, we present an overview of our achievements in nitrogen atom insertion reactions, with a focus on the reaction scopes, mechanistic features, and synthetic applications. We anticipate that this Account will provide valuable insights and propel the development of innovative methodologies in both skeletal editing and N-heterocycle synthesis.
Collapse
Affiliation(s)
- Hong Lu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710069, China
| | - Jie Chang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710069, China
| | - Hao Wei
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710069, China
| |
Collapse
|
14
|
Cheng Z, Hu Z, Jiao N. Molecular Ring Remodeling through C-C Bond Cleavage. Acc Chem Res 2025; 58:1003-1022. [PMID: 40014373 DOI: 10.1021/acs.accounts.4c00846] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/28/2025]
Abstract
ConspectusStable and inert C-C bonds form the fundamental framework of organic compounds. Consequently, direct transformations involving C-C bond cleavage present an innovative approach for the rapid modification and remodeling of molecular skeletons. In recent years, the concept of molecular skeletal editing has garnered widespread attention and has been significantly developed, providing new opportunities for the late-stage modification of bioactive molecules, the high-value transformation of bulk chemicals, and a revolution in the traditional fragment coupling strategies of chemical synthesis. Notable advancements in this field have focused on C-C bond cleavage and the remodeling of cyclic molecules, including ring expansion, ring contraction, and ring-opening reactions, thereby enriching the synthetic toolbox available to chemists. However, selective C-C bond transformation remains a formidable challenge, especially in the remodeling of complex molecules, due to the high bond dissociation energy and the difficulty in achieving precise selectivity control. Over the past few years, our group has made efforts to address these challenges. We have demonstrated the potential of cyclic molecule remodeling reactions as an efficient strategy for the synthesis and modification of complex molecules.Herein, we present two major thematic advancements achieved by our group, utilizing cascade activation and entropy-driven reconstruction strategies for molecular ring remodeling via C-C bond cleavage. These strategies are characterized by mild conditions, the accessibility of catalysts and reagents, and exceptional functional group compatibility, thereby emerging as novel approaches for molecular ring remodeling through atom-incorporation reactions mainly on nitrogenation, oxygenation, and halogenation to synthesize pharmaceuticals, natural products, and material molecules. (1) Ring expansion reactions: We developed novel reactions that enable the insertion of C-, N-, and O-containing units into molecular rings. These methodologies offer practical and efficient routes for synthesizing amides, amines, lactones, and nitrogen-containing heterocycles. (2) Ring-opening reactions: C-C bond cleavage in ring-opening reactions enables the efficient construction of distally difunctionalized molecular frameworks. By utilizing a transition metal catalysis and radical-mediated process, we have successfully achieved the cleavage of both C-C single bonds and C═C double bonds within molecular rings. Furthermore, we have tackled the highly challenging arene ring-opening (ARO) reaction, enabling the construction of stereoselective conjugated systems through the unsaturation liberation of aromatic systems. Mechanistic studies and DFT calculations have provided critical insights into these processes. We have also identified key intermediates involved in C-C bond cleavage, including benzyl azide, O-acetyl hydroxylamine, β-azido peroxyl radical, copper bisnitrene, and 2-nitrene indazole. These findings have deepened our understanding of the mechanisms and the entropy-driven reconstruction strategy, which has further promoted the discovery of related C-C bond transformations of acyclic substrates.
Collapse
Affiliation(s)
- Zengrui Cheng
- State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
| | - Zhibin Hu
- State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
| | - Ning Jiao
- State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
- Changping Laboratory, Yard 28, Science Park Road, Changping District, Beijing 102206, China
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, East China Normal University, Shanghai 200062, China
| |
Collapse
|
15
|
Oladeji SM, Conteh DN, Bello LA, Adegboyega AE, Shokunbi OS. Rational Design and Optimization of Novel PDE5 Inhibitors for Targeted Colorectal Cancer Therapy: An In Silico Approach. Int J Mol Sci 2025; 26:1937. [PMID: 40076563 PMCID: PMC11899891 DOI: 10.3390/ijms26051937] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2025] [Revised: 02/14/2025] [Accepted: 02/20/2025] [Indexed: 03/14/2025] Open
Abstract
Colorectal cancer (CRC) is one of the leading causes of cancer-related deaths globally. Current treatment options including chemotherapy and targeted therapies face challenges such as resistance and toxicity. Cyclic guanosine monophosphate (cGMP)-specific phosphodiesterase 5 (PDE5) has emerged as a promising target for CRC therapy due to its role in regulating cellular processes like proliferation and apoptosis. This study focuses on the in silico design of a novel PDE5 inhibitor MS01 derived from the lead compound exisulind which has shown apoptotic effects but failed due to hepatotoxicity. Using Schrödinger's Induced Fit Docking (IFD) and molecular dynamic simulations, MS01 was designed to enhance binding affinity and reduce toxicity. The docking studies showed that MS01 exhibits stronger interactions with key PDE5 residues, particularly Gln817 and Phe820. ADMET predictions indicate favorable pharmacokinetic profiles, with reduced risk of drug-drug interactions and improved bioavailability. Toxicity assessments revealed that MS01 and its analogs have moderate toxicity, with MS20 and MS21 demonstrating lower hepatotoxicity compared to exisulind. These findings suggest that MS01 has the potential to be a more effective and safer PDE5 inhibitor for CRC treatment pending further experimental validation.
Collapse
Affiliation(s)
| | - Deborah Ngozi Conteh
- Department of Medicine and Surgery, University of Ilorin, P.M.B, Ilorin 1515, Nigeria;
| | - Lukman Abidemi Bello
- Department of Chemistry, Purdue University, West Lafayette, IN 47907, USA; (S.M.O.); (L.A.B.)
| | - Abayomi Emmanuel Adegboyega
- Department of Biological Sciences, Structural and Computational Biology, Purdue University, West Lafayette, IN 47907, USA;
- Jaris Computational Biology Centre, Bioinformatics Unit, Jos 930241, Nigeria
| | - Oluwatosin Sarah Shokunbi
- Department of Basic Sciences, Babcock University, School of Science and Technology, Babcock University, Ilishan-Remo 121003, Nigeria
| |
Collapse
|
16
|
Alcarazo M. Dibenzothiophenium Salts: Practical Alternatives to Hypervalent I(III)-Based Reagents. Acc Chem Res 2025; 58:635-646. [PMID: 39895033 PMCID: PMC11840934 DOI: 10.1021/acs.accounts.4c00804] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2024] [Revised: 01/12/2025] [Accepted: 01/17/2025] [Indexed: 02/04/2025]
Abstract
ConspectusDuring the past few years, the interest among organic synthesis practitioners in the use of sulfonium salts has exponentially growth. This can arguably be attributed to a series of specific factors: (a) The recent development of more direct and efficient protocols for the synthesis of these species, which make sulfonium reagents of a wide structural variety easily available in multigram scale. (b) The recognition that the reactivity of these salts resembles that of hypervalent iodine compounds, and therefore, they can be used as effective replacement of such species in most of their applications. (c) Their intrinsic thermal stability and tolerance to air and moisture, which clearly surpass that of I(III)-reagents of analogue reactivity, and facilitate their purification, isolation as well-defined species, storage, and safely handling on larger scale. (d) Finally, the possibility to further functionalize sulfonium salts once the sulfur-containing platform has been incorporated. Specifically, this last synthetic approach is not trivial when working with hypervalent I(III)-species and facilitates the access to sulfonium salts with no counterpart in the I(III) realm.This renewed interest in sulfonium salts has led to the improvement of already existing transformations as well as to the discovery of unprecedented ones; in particular, by the development of protocols that incorporate sulfonium salts as partners in traditional cross-coupling and C-H activation steps or combine them with more modern technologies such as photocatalysis or electrosynthesis. In this Account, the reactivity of a series of sulfonium salts originally prepared in our laboratory will be outlined and compared to their I(III)-counterparts. Some of these reagents are now commercially available, and their use has started to spread widely across the synthetic chemistry community, helping to speed the process of identification of potentially bioactive products or new functionaliced materials. However, challenges still remain. The development of sulfonium reagents characterized by an optimal balance between reactivity and site-selectivity, or showing broader compatibility toward sensitive functional groups is still a need. In addition, the intrinsic stability of sulfonium salts often makes necessary the use of (sophisticated) catalysts that activate the latent reactivity hidden in their structures. Although a priori one can see this fact as a disadvantage, it might actually be decisive to harvest the full synthetic potential of sulfonium salts because their thermal stability will surely facilitate the preparation of operational reagents with no counterpart in the context of I(III)-chemistry. If this becomes true, sulfonium salts may contribute to the expediting of retrosynthetic disconnections that, to date, are impossible.
Collapse
Affiliation(s)
- Manuel Alcarazo
- Institut für Organische und
Biomolekulare Chemie, Georg-August-Universität
Göttingen, Tammannstr 2, 37077 Göttingen, Germany
| |
Collapse
|
17
|
Bro FS, Laraia L. Unifying principles for the design and evaluation of natural product-inspired compound collections. Chem Sci 2025; 16:2961-2979. [PMID: 39906386 PMCID: PMC11788825 DOI: 10.1039/d4sc08017c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2024] [Accepted: 01/24/2025] [Indexed: 02/06/2025] Open
Abstract
Natural products play a major role in the discovery of novel bioactive compounds. In this regard, the synthesis of natural product-inspired and -derived analogues is an active field that is further developing. Several strategies and principles for the design of such compounds have been developed to streamline their access and synthesis. This perspective describes how individual strategies or their elements can be combined depending on the project goal. Illustrative examples are shown that demonstrate the blurred lines between approaches and how they can work in concert to discover new biologically active molecules. Lastly, a general set of guidelines for choosing an appropriate strategy combination for the specific purpose is presented.
Collapse
Affiliation(s)
- Frederik Simonsen Bro
- Department of Chemistry, Technical University of Denmark 2800 Kongens Lyngby Denmark
| | - Luca Laraia
- Department of Chemistry, Technical University of Denmark 2800 Kongens Lyngby Denmark
| |
Collapse
|
18
|
Bossonnet A, Garner RA, O'Brien J, Trujillo C, Trowbridge AD. Oxenoid Reactivity Enabled by Targeted Photoactivation of Periodate. Angew Chem Int Ed Engl 2025; 64:e202417402. [PMID: 39423248 DOI: 10.1002/anie.202417402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2024] [Revised: 10/15/2024] [Accepted: 10/17/2024] [Indexed: 10/21/2024]
Abstract
The chemistry of low-valent intermediates continues to inspire new modes of reactivity across synthetic chemistry. But while the generation and reactivity of both carbenes and nitrenes are well-established, difficulties in accessing oxene, their oxygen-based congener, has severely hampered its application in synthesis. Here, we report a conceptually novel approach towards oxenoid reactivity through the violet-light photolysis of tetrabutylammonium periodate. Computational studies reveal an unexpected geometric change upon periodate photoexcitation that facilitates intersystem crossing and near-barrierless dissociation of triplet periodate into oxene. Under these operationally simple conditions, we have demonstrated the epoxidation of a wide range of substituted olefins, revealing unprecedented functional group compatibility. By overcoming the historic challenges associated with employing oxene as an intermediate in organic chemistry, we believe that this platform will inspire the development of new reactive oxygen-based methodologies across industry and academia.
Collapse
Affiliation(s)
- Andre Bossonnet
- Department of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, U.K
| | - Ruth A Garner
- Department of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, U.K
| | - James O'Brien
- Department of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, U.K
| | - Cristina Trujillo
- Department of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, U.K
| | - Aaron D Trowbridge
- Department of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, U.K
| |
Collapse
|
19
|
Kelly PQ, Keramati NR, Kaplin KR, Lynch‐Colameta T, Phelan JP, Levin MD. Redox-Tunable Ring Expansion Enabled By A Single-Component Electrophilic Nitrogen Atom Synthon. Angew Chem Int Ed Engl 2025; 64:e202420664. [PMID: 39527698 PMCID: PMC11796328 DOI: 10.1002/anie.202420664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2024] [Revised: 11/08/2024] [Accepted: 11/11/2024] [Indexed: 11/16/2024]
Abstract
Controllable installation of a single nitrogen atom is central to many major goals in skeletal editing, with progress often gated by the availability of an appropriate N-atom source. Here we introduce a novel reagent, termed DNIBX, based on dibenzoazabicycloheptadiene (dbabh), which allows the electrophilic installation of dbabh to organic substrates. When indanone β-ketoesters are aminated by DNIBX, the resulting products undergo divergent ring expansions depending on the mode of activation, producing heterocycles in differing oxidation states under thermal and photochemical conditions. The mechanism of each transformation is discussed, and the different reactivity modes of the indanone-dbabh adducts are compared to other nitrogenous precursors.
Collapse
Affiliation(s)
- Patrick Q. Kelly
- Department of ChemistryUniversity of ChicagoChicagoIL 60637United States
| | - Nikki R. Keramati
- Department of ChemistryUniversity of ChicagoChicagoIL 60637United States
| | - Kate R. Kaplin
- Department of ChemistryUniversity of ChicagoChicagoIL 60637United States
| | - Tessa Lynch‐Colameta
- GSKDepartment of Medicinal Chemistry1250 South Collegeville RoadCollegevillePA 19426United States
| | - James P. Phelan
- GSKDepartment of Medicinal Chemistry1250 South Collegeville RoadCollegevillePA 19426United States
| | - Mark D. Levin
- Department of ChemistryUniversity of ChicagoChicagoIL 60637United States
| |
Collapse
|
20
|
Zhang X, Song Q, Liu S, Sivaguru P, Liu Z, Yang Y, Ning Y, Anderson EA, de Ruiter G, Bi X. Asymmetric dearomative single-atom skeletal editing of indoles and pyrroles. Nat Chem 2025; 17:215-225. [PMID: 39609530 DOI: 10.1038/s41557-024-01680-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 10/23/2024] [Indexed: 11/30/2024]
Abstract
Heterocycle skeletal editing has recently emerged as a powerful tactic for achieving heterocycle-to-heterocycle transmutation without the need for multistep de novo heterocycle synthesis. However, the enantioselective skeletal editing of heteroarenes through single-atom logic remains challenging. Here we report the enantiodivergent dearomative skeletal editing of indoles and pyrroles via an asymmetric carbon-atom insertion, using trifluoromethyl N-triftosylhydrazones as carbene precursors. This strategy provides a straightforward methodology to access enantiomerically enriched six-membered N-heterocycles containing a trifluoromethylated quaternary stereocentre from planar N-heteroarenes. The synthetic utility of this enantiodivergent methodology was demonstrated by a broad evaluation of reaction scope, product derivatization and concise syntheses of drug analogues. Mechanistic studies reveal that the excellent asymmetric induction arises from the initial cyclopropanation step. The asymmetric single-atom insertion strategy is expected to have a broad impact on the field of single-atom skeletal editing and catalytic asymmetric dearomatization of aromatic compounds.
Collapse
Affiliation(s)
- Xiaolong Zhang
- Department of Chemistry, Northeast Normal University, Changchun, China
| | - Qingmin Song
- Department of Chemistry, Northeast Normal University, Changchun, China
| | - Shaopeng Liu
- Department of Chemistry, Northeast Normal University, Changchun, China
| | | | - Zhaohong Liu
- Department of Chemistry, Northeast Normal University, Changchun, China.
| | - Yong Yang
- Department of Chemistry, Northeast Normal University, Changchun, China
| | - Yongyue Ning
- Department of Chemistry, Northeast Normal University, Changchun, China
| | - Edward A Anderson
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford, UK
| | - Graham de Ruiter
- Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Haifa, Israel
| | - Xihe Bi
- Department of Chemistry, Northeast Normal University, Changchun, China.
- State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin, China.
| |
Collapse
|
21
|
Zhu T, Cui X, Ma W, Qi X, Wei H. Synthesis of naphthalene derivatives via nitrogen-to-carbon transmutation of isoquinolines. SCIENCE ADVANCES 2025; 11:eads5928. [PMID: 39879292 PMCID: PMC11777194 DOI: 10.1126/sciadv.ads5928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2024] [Accepted: 12/30/2024] [Indexed: 01/31/2025]
Abstract
Heteroarene skeletal editing is gaining popularity in synthetic chemistry. Transmuting single atoms generates molecules that have distinctly varied properties, thereby fostering potent molecular exchanges that can be extensively used to synthesize functional molecules. Herein, we present a convenient protocol for nitrogen-carbon single-atom transmutations in isoquinolines, which is inspired by the Wittig reaction and enables easy access to substituted naphthalene derivatives. The reaction uses an inexpensive and commercially available phosphonium ylide as the carbon source to furnish a wide range of substituted naphthalenes. The key to the success of this transformation is the formation of a triene intermediate through ring opening, which undergoes 6π-electrocyclization and elimination processes to afford the naphthalene product. Furthermore, this strategy enables the facile synthesis of 13C-labeled naphthalenes using 13CH3PPh3I as a commercial 13C source and facilitates modifying the directing group for C─H functionalization.
Collapse
Affiliation(s)
- Tongtong Zhu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi’an 710069, China
| | - Xuhui Cui
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi’an 710069, China
| | - Wenjun Ma
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi’an 710069, China
| | - Xiujuan Qi
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi’an 710072, China
| | - Hao Wei
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi’an 710069, China
| |
Collapse
|
22
|
Shen Y, Huang A, Lu X, Jia A, Luo S, Li XX, Tang S. Substituent-Controlled Regiodivergent Rearrangement of Gramine Ammonium Ylide. J Org Chem 2025. [PMID: 39882839 DOI: 10.1021/acs.joc.4c02698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2025]
Abstract
The complicated mechanism makes the regiodivergent rearrangement of ammonium ylide seem to be out of reach. Herein, we reported a regiodivergent rearrangement of gramine ammonium ylide well controlled by the substituents. Density functional theory studies reveal that the ammonium ylide with a more steric hindrance substituent 2-diazo-2-arylacetate goes through a stepwise mechanism to yield both a kinetically and thermodynamically preferred [1,2]-rearrangement product. In contrast, the ammonium ylide with a less steric hindrance ethyl diazoacetate goes through a concerted mechanism to generate the [2,3]-rearrangement product, which is kinetically favored as a result of the release of the ring strain in the transition state. This study would open up avenues to grasp the rearrangement of ammonium ylide, which will promote application in the skeletal editing and synthesis of complex natural products.
Collapse
Affiliation(s)
- Yu Shen
- Key Laboratory of Tropical Biological Resources of Ministry of Education, School of Pharmaceutical Sciences, Hainan University, Haikou 570228, P.R. China
| | - Ao Huang
- Key Laboratory of Tropical Biological Resources of Ministry of Education, School of Pharmaceutical Sciences, Hainan University, Haikou 570228, P.R. China
| | - Xiyao Lu
- Key Laboratory of Tropical Biological Resources of Ministry of Education, School of Pharmaceutical Sciences, Hainan University, Haikou 570228, P.R. China
| | - Aiqun Jia
- Hainan General Hospital, Hainan Affiliated Hospital of Hainan Medical University, Haikou 570311, P.R. China
| | - Shuang Luo
- Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, 190 Kaiyuan Avenue, Guangzhou 510530, P.R. China
| | - Xiao-Xi Li
- Institute of Frontier Chemistry, School of Chemistry and Chemical Engineering, Shandong University, Qingdao 266237, P.R. China
| | - Shi Tang
- Key Laboratory of Tropical Biological Resources of Ministry of Education, School of Pharmaceutical Sciences, Hainan University, Haikou 570228, P.R. China
| |
Collapse
|
23
|
Han J, Fan Y, Yang X, Zhu Y, Zhang X, Zhang F, Hao G, Jiang Y. Synthesis of Functionalized Cycloheptadienones Starting from Phenols and Using a Rhodium/Boron Asymmetric Catalytic System. Angew Chem Int Ed Engl 2025; 64:e202416468. [PMID: 39496563 DOI: 10.1002/anie.202416468] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2024] [Revised: 10/11/2024] [Accepted: 11/04/2024] [Indexed: 11/06/2024]
Abstract
Skeletal editing offers a unique route to assemble complex architectures from simple feedstocks that are otherwise difficult to obtain. However, the asymmetric version of skeletal editing has not been widely studied. Herein, we present a modular rhodium/boron asymmetric catalytic system that enables ring-expansion of phenols with cyclopropenes to synthesize highly functionalized cycloheptadienones in excellent chemo- and regioselectivities. This unique protocol features with low-catalyst loading, atom and step-economies, and mild neutral reaction conditions. Isotope-labelling experiments and DFT calculations have been conducted to reveal that boron reagent plays a vital role in the whole catalytic cycle.
Collapse
Affiliation(s)
- Jiabin Han
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University Guizhou University, Guiyang, 550025, China
- Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Nanjing Tech University, Nanjing, 211816, China
| | - Yaxin Fan
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University Guizhou University, Guiyang, 550025, China
| | - Xiaoyan Yang
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University Guizhou University, Guiyang, 550025, China
| | - Yuanhao Zhu
- Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Nanjing Tech University, Nanjing, 211816, China
| | - Xuheng Zhang
- Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Nanjing Tech University, Nanjing, 211816, China
| | - Fukuan Zhang
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University Guizhou University, Guiyang, 550025, China
| | - Gefei Hao
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University Guizhou University, Guiyang, 550025, China
| | - Yaojia Jiang
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University Guizhou University, Guiyang, 550025, China
| |
Collapse
|
24
|
Kim SF, Liles JP, Lux MC, Park H, Jurczyk J, Soda Y, Yeung CS, Sigman MS, Sarpong R. Interrogation of Enantioselectivity in the Photomediated Ring Contractions of Saturated Heterocycles. J Am Chem Soc 2025; 147:1851-1866. [PMID: 39746148 PMCID: PMC12081160 DOI: 10.1021/jacs.4c13999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2025]
Abstract
We recently reported a chiral phosphoric acid (CPA) catalyzed enantioselective photomediated ring contraction of piperidines and other saturated heterocycles. By extruding a single heteroatom from a ring, this transformation builds desirable C(sp3)-C(sp3) bonds in the ring contracted products; however, the origins of enantioselectivity remain poorly understood. In this work, enantioselectivity of the ring contraction has been explored across an expanded structurally diverse substrate scope, revealing a wide range of enantioselectivities (0-99%) using two distinct CPA catalysts. Mechanistic investigations support rate-determining excitation that generates short-lived achiral intermediates that are intercepted by the CPA in an enantiodetermining ring closure. The effects of competitive uncatalyzed reactivity and light-driven reversibility of the enantiodetermining ring closure on enantioselectivity have been elucidated. Statistical models were built by regressing the range of enantioselectivities from the substrate scope against key structural features of the products for both CPA catalysts. The resultant models suggested distinct factors that influence the enantioselectivity response for each catalyst and enabled rational modification of a pharmaceutically relevant target molecule to improve enantioselectivity. Finally, density functional theory (DFT)-based transition state analysis identified distinct noncovalent interactions with each catalyst that correlated with the unique selectivity-relevant features uncovered through statistical modeling. Our findings not only offer comprehensive insight into the origins of enantioselectivity in this system but should also aid future development of related photomediated CPA-catalyzed reactions.
Collapse
Affiliation(s)
- Sojung F. Kim
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
| | - Jordan P. Liles
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| | - Michaelyn C. Lux
- Department of Discovery Chemistry, Merck & Co., Inc., Boston, Massachusetts 02115, United States; Present Address: Pfizer Research & Development, Cambridge, Massachusetts 02139, United States
| | - Hojoon Park
- Department of Discovery Chemistry, Merck & Co., Inc., Boston, Massachusetts 02115, United States
| | - Justin Jurczyk
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States; Present Address: Gilead Sciences, Inc., 333 Lakeside Drive, Foster City, California 94404, United States
| | - Yasuki Soda
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States; Present Address: Gilead Sciences, Inc., 333 Lakeside Drive, Foster City, California 94404, United States; Present Address: The Warren and Katharine Schlinger Laboratory for Chemistry and Chemical Engineering, Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Charles S. Yeung
- Department of Discovery Chemistry, Merck & Co., Inc., Boston, Massachusetts 02115, United States
| | - Matthew S. Sigman
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| | - Richmond Sarpong
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
| |
Collapse
|
25
|
Borkovic I, Ferjancic Z, Bihelovic F. A Formal 1,2-Stevens Rearrangement of Thioester Ylides as a Single-Atom Molecular Editing Tool. Org Lett 2025; 27:488-492. [PMID: 39715338 DOI: 10.1021/acs.orglett.4c04495] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2024]
Abstract
A rhodium-catalyzed reaction of thioesters with diazo reagents was recognized as a powerful and unprecedented tool for single-atom molecular editing by the insertion of a single carbon atom into the C(O)─S thioester bond, thereby leading to various α-thioketones possessing a quaternary carbon atom. A selective and precise defunctionalization of the polyfunctionalized products further demonstrated the synthetic utility of the reaction for the synthesis of more common structural classes of compounds.
Collapse
Affiliation(s)
- Ivan Borkovic
- University of Belgrade, Faculty of Chemistry, Studentski trg 16, P.O. Box 51, 11158 Belgrade 118, Serbia
| | - Zorana Ferjancic
- University of Belgrade, Faculty of Chemistry, Studentski trg 16, P.O. Box 51, 11158 Belgrade 118, Serbia
| | - Filip Bihelovic
- University of Belgrade, Faculty of Chemistry, Studentski trg 16, P.O. Box 51, 11158 Belgrade 118, Serbia
| |
Collapse
|
26
|
Zhou Y, Lei SG, Abudureheman B, Wang LS, Yu ZC, Xiang JC, Wu AX. Transforming an azaarene into the spine of fusedbicyclics via cycloaddition-induced scaffold hopping of 5-Hydroxypyrazoles. Nat Commun 2024; 15:10907. [PMID: 39738133 DOI: 10.1038/s41467-024-55312-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2024] [Accepted: 12/05/2024] [Indexed: 01/01/2025] Open
Abstract
Skeleton editing for heteroarenes, especially pyrazoles, is challenging and remains scarce because these non-strained aromatics exhibit inert reactivities, making them relatively inactive for performing a dearomatization/cleavage sequence. Here, we disclose a cycloaddition-induced scaffold hopping of 5-hydroxypyrazoles to access the pyrazolopyridopyridazin-6-one skeleton through a single-operation protocol. By converting a five-membered aza-arene into a five-unit spine of a 6/6 fused-bicyclic, this work unlocks a ring-opening reactivity of the pyrazole core that involves a formal C = N bond cleavage while retaining the highly reactive N-N bond in the resulting product. A [4 + 2] cycloaddition of a temporarily dearomatized 5-hydroxypyrrole with an in situ generated aza-1,3-diene, followed by oxidative C-N bond cleavage, constitutes the domino pathway. A library of pyrazolopyridopyridazin-6-ones, which are medicinally relevant nitrogen-atom-rich tricyclics, is obtained efficiently from readily available materials.
Collapse
Affiliation(s)
- You Zhou
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, College of Chemistry, Central China Normal University, Wuhan, P.R. China
| | - Shuang-Gui Lei
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, College of Chemistry, Central China Normal University, Wuhan, P.R. China
| | - Baihetiguli Abudureheman
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, College of Chemistry, Central China Normal University, Wuhan, P.R. China
| | - Li-Sheng Wang
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, College of Chemistry, Central China Normal University, Wuhan, P.R. China
| | - Zhi-Cheng Yu
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, College of Chemistry, Central China Normal University, Wuhan, P.R. China
| | - Jia-Chen Xiang
- School of Chemistry and Chemical Engineering, Southeast University, Nanjing, P.R. China.
| | - An-Xin Wu
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, College of Chemistry, Central China Normal University, Wuhan, P.R. China.
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou, P. R. China.
| |
Collapse
|
27
|
Baró EL, Catti F, Estarellas C, Ghashghaei O, Lavilla R. Drugs from drugs: New chemical insights into a mature concept. Drug Discov Today 2024; 29:104212. [PMID: 39442750 DOI: 10.1016/j.drudis.2024.104212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2024] [Revised: 10/01/2024] [Accepted: 10/14/2024] [Indexed: 10/25/2024]
Abstract
Developing new drugs from marketed ones is a well-established and successful approach in drug discovery. We offer a unified view of this field, focusing on the new chemical aspects of the involved approaches: (a) chemical transformation of the original drugs (late-stage modifications, molecular editing), (b) prodrug strategies, and (c) repurposing as a tool to develop new hits/leads. Special focus is placed on the molecular structure of the drugs and their synthetic feasibility. The combination of experimental advances and new computational approaches, including artificial intelligence methods, paves the way for the evolution of the drugs from drugs concept.
Collapse
Affiliation(s)
- Eloy Lozano Baró
- Laboratory of Medicinal Chemistry, Faculty of Pharmacy and Food Sciences, University of Barcelona and Institute of Biomedicine UB (IBUB), Av. Joan XXIII, 27-31, 08028 Barcelona, Spain
| | - Federica Catti
- Faculty of Science and Mathematics, Arkansas State University Campus Querétaro, Carretera Estatal 100, km 17.5. C.P. 76270, Municipio de Colón, Estado de Querétaro, Mexico
| | - Carolina Estarellas
- Departament de Nutrició, Ciències de l'Alimentació i Gastronomia, Institut de Química Teòrica i Computacional, University of Barcelona, Barcelona, Spain
| | - Ouldouz Ghashghaei
- Laboratory of Medicinal Chemistry, Faculty of Pharmacy and Food Sciences, University of Barcelona and Institute of Biomedicine UB (IBUB), Av. Joan XXIII, 27-31, 08028 Barcelona, Spain.
| | - Rodolfo Lavilla
- Laboratory of Medicinal Chemistry, Faculty of Pharmacy and Food Sciences, University of Barcelona and Institute of Biomedicine UB (IBUB), Av. Joan XXIII, 27-31, 08028 Barcelona, Spain.
| |
Collapse
|
28
|
Bhatti P, Gupta A, Chaudhari SB, Valmiki RK, Laha JK, Manna S. Skeletal Editing via Transition-Metal-Catalyzed Nitrene Insertion. CHEM REC 2024; 24:e202400184. [PMID: 39607383 DOI: 10.1002/tcr.202400184] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2024] [Revised: 11/20/2024] [Indexed: 11/29/2024]
Abstract
Metal-nitrenes are valuable reactive intermediates for synthesis and are widely used to construct biologically relevant scaffolds, complexes and functionalized molecules. The ring expansion of cyclic molecules via single-nitrogen-atom insertion via nitrene or metal-nitrenoid intermediates has emerged as a promising modern strategy for driving advantageous nitrogen-rich compound synthesis. In recent years, the catalytic insertion of a single nitrogen atom into carbocycles, leading to N-heterocycles, has become an important focus of modern synthetic approaches with applications in medicinal chemistry, materials science, and industry. Catalytic single-nitrogen-atom insertions have been increasing in prominence in modern organic synthesis due to their capability to construct high-value added nitrogen-containing heterocycles from simple feedstocks. In this review, we will discuss the rapidly growing field of skeletal editing via single-nitrogen-atom insertion using transition metal catalysis to access nitrogen-containing heterocycles, with a focus on nitrogen insertion across a wide spectrum of carbocycles.
Collapse
Affiliation(s)
- Pratibha Bhatti
- Department of Pharmaceutical Technology (Process Chemistry), National Institute of Pharmaceutical Education and Research, Sector-67, S. A. S., 160062, Nagar, Punjab, India
| | - Anjali Gupta
- Department of Pharmaceutical Technology (Process Chemistry), National Institute of Pharmaceutical Education and Research, Sector-67, S. A. S., 160062, Nagar, Punjab, India
| | - Shubham B Chaudhari
- Department of Pharmaceutical Technology (Process Chemistry), National Institute of Pharmaceutical Education and Research, Sector-67, S. A. S., 160062, Nagar, Punjab, India
| | - Rahul K Valmiki
- Department of Pharmaceutical Technology (Process Chemistry), National Institute of Pharmaceutical Education and Research, Sector-67, S. A. S., 160062, Nagar, Punjab, India
| | - Joydev K Laha
- Department of Pharmaceutical Technology (Process Chemistry), National Institute of Pharmaceutical Education and Research, Sector-67, S. A. S., 160062, Nagar, Punjab, India
| | - Srimanta Manna
- Department of Pharmaceutical Technology (Process Chemistry), National Institute of Pharmaceutical Education and Research, Sector-67, S. A. S., 160062, Nagar, Punjab, India
| |
Collapse
|
29
|
Leinert M, Irrgang T, Kempe R. A Catalytic Version of the Knorr Pyrrole Synthesis Permits Access to Pyrroles and Pyridines. J Am Chem Soc 2024; 146:32098-32104. [PMID: 39526919 DOI: 10.1021/jacs.4c13266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2024]
Abstract
Aromatic N-heterocycles, such as pyrroles and pyridines, are important natural products and bulk and fine chemicals with numerous applications as active ingredients of pharmaceuticals and agrochemicals, as catalysts, and in materials sciences. We report here a catalytic version of the Knorr pyrrole synthesis in which simple and diversely available starting materials, such as 1,2-amino alcohols or 1,3-amino alcohols and keto esters, undergo a dehydrogenative coupling to form pyrroles and pyridines, respectively. Our reaction forms hydrogen as a collectible (and usable) byproduct and is mediated by a well-defined Mn catalyst. The synthesis of highly functionalized heterocycles and applications was demonstrated, and 35 compounds, not yet reported in the literature, were introduced.
Collapse
Affiliation(s)
- Max Leinert
- Lehrstuhl Anorganische Chemie II - Katalysatordesign, Sustainable Chemistry Centre, Universität Bayreuth, Bayreuth 95440, Germany
| | - Torsten Irrgang
- Lehrstuhl Anorganische Chemie II - Katalysatordesign, Sustainable Chemistry Centre, Universität Bayreuth, Bayreuth 95440, Germany
| | - Rhett Kempe
- Lehrstuhl Anorganische Chemie II - Katalysatordesign, Sustainable Chemistry Centre, Universität Bayreuth, Bayreuth 95440, Germany
| |
Collapse
|
30
|
Dong X, Shao Y, Liu Z, Huang X, Xue XS, Chen Y. Radical 6-Endo Addition Enables Pyridine Synthesis under Metal-Free Conditions. Angew Chem Int Ed Engl 2024; 63:e202410297. [PMID: 39031447 DOI: 10.1002/anie.202410297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 07/09/2024] [Accepted: 07/16/2024] [Indexed: 07/22/2024]
Abstract
Metal-free synthesis of heterocycles is highly sought after in the pharmaceutical industry and has garnered widespread attention due to eliminating the need to remove trace metal catalysts from the reaction. We report a radical 6-endo addition method for pyridine synthesis from cyclopropylamides and alkynes under metal-free conditions. Various terminal and substituted alkynes are inserted as C2 units into cyclopropylamides to synthesize versatile pyridines with 57 examples. Mechanistic investigations and computational studies indicate the unprecedented 6-endo-trig addition of vinyl radicals to the imine nitrogen atom rather than the conventional 5-exo-trig addition to the imine carbon atom, in which the hypervalent iodine(III) plays a critical role. This reaction easily scales up with excellent functional group compatibility and suits the late-stage pyridine installation on complex molecules.
Collapse
Affiliation(s)
- Xiaojuan Dong
- Central China Normal University, 152 Luoyu Road, Wuhan, Hubei, 430079, China
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - Yingbo Shao
- College of Chemistry, Nankai University, Tianjin, 300071, China
| | - Zhengyi Liu
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - Xia Huang
- Central China Normal University, 152 Luoyu Road, Wuhan, Hubei, 430079, China
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - Xiao-Song Xue
- School of Chemistry and Material Sciences, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, 1 Sub-lane Xiangshan, Hangzhou, 310024, China
- Key Laboratory of Fluorine and Nitrogen Chemistry and Advanced Materials, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - Yiyun Chen
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
- School of Physical Science and Technology, Shanghai Tech University, 100 Haike Road, Shanghai, 201210, China
- School of Chemistry and Material Sciences, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, 1 Sub-lane Xiangshan, Hangzhou, 310024, China
| |
Collapse
|
31
|
Qin Q, Zhang L, Wei J, Qiu X, Hao S, An XD, Jiao N. Direct oxygen insertion into C-C bond of styrenes with air. Nat Commun 2024; 15:9015. [PMID: 39424824 PMCID: PMC11489579 DOI: 10.1038/s41467-024-53266-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Accepted: 10/08/2024] [Indexed: 10/21/2024] Open
Abstract
Skeletal editing of single-atom insertion to basic chemicals has been demonstrated as an efficient strategy for the discovery of structurally diversified compounds. Previous endeavors in skeletal editing have successfully facilitated the insertion of boron, nitrogen, and carbon atoms. Given the prevalence of oxygen atoms in biologically active molecules, the direct oxygenation of C-C bonds through single-oxygen-atom insertion like Baeyer-Villiger reaction is of particular significance. Herein, we present an approach for the skeletal modification of styrenes using O2 via oxygen insertion, resulting in the formation of aryl ether frameworks under mild reaction conditions. The broad functional-group tolerance and the excellent chemo- and regioselectivity are demonstrated in this protocol. A preliminary mechanistic study indicates the potential involvement of 1,2-aryl radical migration in this reaction.
Collapse
Affiliation(s)
- Qixue Qin
- College of Chemistry and Pharmaceutical Sciences, Qingdao Agricultural University, Chang Cheng Rd. 700, Qingdao, Shandong, China.
| | - Liang Zhang
- College of Chemistry and Pharmaceutical Sciences, Qingdao Agricultural University, Chang Cheng Rd. 700, Qingdao, Shandong, China
| | - Jialiang Wei
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Chemical Biology Center, Peking University, Beijing, China
| | - Xu Qiu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Chemical Biology Center, Peking University, Beijing, China
| | - Shuanghong Hao
- College of Chemistry and Pharmaceutical Sciences, Qingdao Agricultural University, Chang Cheng Rd. 700, Qingdao, Shandong, China
| | - Xiao-De An
- College of Chemistry and Pharmaceutical Sciences, Qingdao Agricultural University, Chang Cheng Rd. 700, Qingdao, Shandong, China
| | - Ning Jiao
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Chemical Biology Center, Peking University, Beijing, China.
| |
Collapse
|
32
|
Tanimoto H, Tomohiro T. Spot the difference in reactivity: a comprehensive review of site-selective multicomponent conjugation exploiting multi-azide compounds. Chem Commun (Camb) 2024; 60:12062-12100. [PMID: 39302239 DOI: 10.1039/d4cc03359k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/22/2024]
Abstract
Going beyond the conventional approach of pairwise conjugation between two molecules, the integration of multiple components onto a central scaffold molecule is essential for the development of high-performance molecular materials with multifunctionality. This approach also facilitates the creation of functionalized molecular probes applicable in diverse fields ranging from pharmaceuticals to polymeric materials. Among the various click functional groups, the azido group stands out as a representative click functional group due to its steric compactness, high reactivity, handling stability, and easy accessibility in the context of multi-azide scaffolds. However, the azido groups in multi-azide scaffolds have not been well exploited for site-specific use in molecular conjugation. In fact, multi-azide compounds have been well used to conjugate to the same multiple fragments. To circumvent problems of promiscuous and random coupling of multiple different fragments to multiple azido positions, it is imperative to distinguish specific azido positions and use them orthogonally for molecular conjugation. This review outlines methods and strategies to exploit specific azide positions for molecular conjugation in the presence of multiple azido groups. Illustrative examples covering di-, tri- and tetraazide click scaffolds are included.
Collapse
Affiliation(s)
- Hiroki Tanimoto
- Faculty of Pharmaceutical Sciences, University of Toyama, 2630 Sugitani, Toyama 930-0194, Japan.
| | - Takenori Tomohiro
- Faculty of Pharmaceutical Sciences, University of Toyama, 2630 Sugitani, Toyama 930-0194, Japan.
| |
Collapse
|
33
|
Koronatov A, Sakharov P, Ranolia D, Kaushansky A, Fridman N, Gandelman M. Triazenolysis of alkenes as an aza version of ozonolysis. Nat Chem 2024:10.1038/s41557-024-01653-3. [PMID: 39394263 DOI: 10.1038/s41557-024-01653-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2023] [Accepted: 09/11/2024] [Indexed: 10/13/2024]
Abstract
Alkenes are broadly used in synthetic applications, thanks to their abundance and versatility. Ozonolysis is one of the most canonical transformations that converts alkenes into molecules bearing carbon-oxygen motifs via C=C bond cleavage. Despite its extensive use in both industrial and laboratory settings, the aza version-cleavage of alkenes to form carbon-nitrogen bonds-remains elusive. Here we report the conversion of alkenes into valuable amines via complete C=C bond disconnection. This process, which we have termed 'triazenolysis', is initiated by a (3 + 2) cycloaddition of triazadienium cation to an alkene. The triazolinium salt formed accepts hydride from borohydride anion and spontaneously decomposes to create new C-N motifs upon further reduction. The developed reaction is applicable to a broad range of cyclic alkenes to produce diamines, while various acyclic C=C bonds may be broken to generate two separate amine units. Computational analysis provides insights into the mechanism, including identification of the key step and elucidating the significance of Lewis acid catalysis.
Collapse
Affiliation(s)
- Aleksandr Koronatov
- Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Israel
| | - Pavel Sakharov
- Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Israel
| | - Deepak Ranolia
- Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Israel
| | - Alexander Kaushansky
- Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Israel
| | - Natalia Fridman
- Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Israel
| | - Mark Gandelman
- Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Israel.
| |
Collapse
|
34
|
Zhang BS, Homölle SL, Bauch T, Oliveira JCA, Warratz S, Yuan B, Gou XY, Ackermann L. Electrochemical Skeletal Indole Editing via Nitrogen Atom Insertion by Sustainable Oxygen Reduction Reaction. Angew Chem Int Ed Engl 2024; 63:e202407384. [PMID: 38959168 DOI: 10.1002/anie.202407384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Revised: 07/01/2024] [Accepted: 07/01/2024] [Indexed: 07/05/2024]
Abstract
Skeletal molecular editing gained considerable recent momentum and emerged as a uniquely powerful tool for late-stage diversifications. Thus far, superstoichiometric amounts of costly hypervalent iodine(III) reagents were largely required for skeletal indole editing. In contrast, we herein show that electricity enables sustainable nitrogen atom insertion reactions to give bio-relevant quinazoline scaffolds without stoichiometric chemical redox-waste product. The transition metal-free electro-editing was enabled by the oxygen reduction reaction (ORR) and proved robust on scale, while tolerating a variety of valuable functional groups.
Collapse
Affiliation(s)
- Bo-Sheng Zhang
- Wöhler-Research Institute for Sustainable Chemistry (WISCh), Georg-August-Universität, Tammannstrasse 2, 37077, Göttingen, Germany
| | - Simon L Homölle
- Wöhler-Research Institute for Sustainable Chemistry (WISCh), Georg-August-Universität, Tammannstrasse 2, 37077, Göttingen, Germany
| | - Tristan Bauch
- Wöhler-Research Institute for Sustainable Chemistry (WISCh), Georg-August-Universität, Tammannstrasse 2, 37077, Göttingen, Germany
| | - João C A Oliveira
- Wöhler-Research Institute for Sustainable Chemistry (WISCh), Georg-August-Universität, Tammannstrasse 2, 37077, Göttingen, Germany
| | - Svenja Warratz
- Wöhler-Research Institute for Sustainable Chemistry (WISCh), Georg-August-Universität, Tammannstrasse 2, 37077, Göttingen, Germany
| | - Binbin Yuan
- Wöhler-Research Institute for Sustainable Chemistry (WISCh), Georg-August-Universität, Tammannstrasse 2, 37077, Göttingen, Germany
| | - Xue-Ya Gou
- Wöhler-Research Institute for Sustainable Chemistry (WISCh), Georg-August-Universität, Tammannstrasse 2, 37077, Göttingen, Germany
| | - Lutz Ackermann
- Wöhler-Research Institute for Sustainable Chemistry (WISCh), Georg-August-Universität, Tammannstrasse 2, 37077, Göttingen, Germany
| |
Collapse
|
35
|
Botlik BB, Weber M, Ruepp F, Kawanaka K, Finkelstein P, Morandi B. Streamlining the Synthesis of Pyridones through Oxidative Amination of Cyclopentenones. Angew Chem Int Ed Engl 2024; 63:e202408230. [PMID: 38934574 DOI: 10.1002/anie.202408230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Revised: 06/12/2024] [Accepted: 06/18/2024] [Indexed: 06/28/2024]
Abstract
Herein we report the development of an oxidative amination process for the streamlined synthesis of pyridones from cyclopentenones. Cyclopentenone building blocks can undergo in situ silyl enol ether formation, followed by the introduction of a nitrogen atom into the carbon skeleton with successive aromatisation to yield pyridones. The reaction sequence is operationally simple, rapid, and carried out in one pot. The reaction proceeds under mild conditions, exhibits broad functional group tolerance, complete regioselectivity, and is well scalable. The developed method provides facile access to the synthesis of 15N-labelled targets, industrially relevant pyridone products and their derivatives in a fast and efficient way.
Collapse
Affiliation(s)
- Bence B Botlik
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir Prelog Weg 3, HCI, 8093, Zürich, Switzerland
| | - Micha Weber
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir Prelog Weg 3, HCI, 8093, Zürich, Switzerland
| | - Florian Ruepp
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir Prelog Weg 3, HCI, 8093, Zürich, Switzerland
| | - Kazuki Kawanaka
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir Prelog Weg 3, HCI, 8093, Zürich, Switzerland
| | - Patrick Finkelstein
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir Prelog Weg 3, HCI, 8093, Zürich, Switzerland
| | - Bill Morandi
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir Prelog Weg 3, HCI, 8093, Zürich, Switzerland
| |
Collapse
|
36
|
Wu FP, Lenz M, Suresh A, Gogoi AR, Tyler JL, Daniliuc CG, Gutierrez O, Glorius F. Nitrogen-to-functionalized carbon atom transmutation of pyridine. Chem Sci 2024; 15:d4sc04413d. [PMID: 39246332 PMCID: PMC11372446 DOI: 10.1039/d4sc04413d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Accepted: 08/25/2024] [Indexed: 09/10/2024] Open
Abstract
The targeted and selective replacement of a single atom in an aromatic system represents a powerful strategy for the rapid interconversion of molecular scaffolds. Herein, we report a pyridine-to-benzene transformation via nitrogen-to-carbon skeletal editing. This approach proceeds via a sequence of pyridine ring-opening, imine hydrolysis, olefination, electrocyclization, and aromatization to achieve the desired transmutation. The most notable features of this transformation are the ability to directly install a wide variety of versatile functional groups in the benzene scaffolding, including ester, ketone, amide, nitrile, and phosphate ester fragments, as well as the inclusion of meta-substituted pyridines which have thus far been elusive for related strategies.
Collapse
Affiliation(s)
- Fu-Peng Wu
- Organisch-Chemisches Institut, Universität Münster Corrensstraße 40 48149 Münster Germany
| | - Madina Lenz
- Organisch-Chemisches Institut, Universität Münster Corrensstraße 40 48149 Münster Germany
| | - Adhya Suresh
- Department of Chemistry, Texas A&M University 3255 TAMU, 580 Ross St 77843 College Station TX USA
| | - Achyut R Gogoi
- Department of Chemistry, Texas A&M University 3255 TAMU, 580 Ross St 77843 College Station TX USA
| | - Jasper L Tyler
- Organisch-Chemisches Institut, Universität Münster Corrensstraße 40 48149 Münster Germany
| | - Constantin G Daniliuc
- Organisch-Chemisches Institut, Universität Münster Corrensstraße 40 48149 Münster Germany
| | - Osvaldo Gutierrez
- Department of Chemistry, Texas A&M University 3255 TAMU, 580 Ross St 77843 College Station TX USA
| | - Frank Glorius
- Organisch-Chemisches Institut, Universität Münster Corrensstraße 40 48149 Münster Germany
| |
Collapse
|
37
|
Li QZ, He MH, Zeng R, Lei YY, Yu ZY, Jiang M, Zhang X, Li JL. Molecular Editing of Ketones through N-Heterocyclic Carbene and Photo Dual Catalysis. J Am Chem Soc 2024; 146:22829-22839. [PMID: 39086019 DOI: 10.1021/jacs.4c08163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/02/2024]
Abstract
The molecular editing of ketones represents an appealing strategy due to its ability to maximize the structural diversity of ketone compounds in a straightforward manner. However, developing efficient methods for the arbitrary modification of ketonic molecules, particularly those integrated within complex skeletons, remains a significant challenge. Herein, we present a unique strategy for ketone recasting that involves radical acylation of pre-functionalized ketones facilitated by N-heterocyclic carbene and photo dual catalysis. This protocol features excellent substrate tolerance and can be applied to the convergent synthesis and late-stage functionalization of structurally complex bioactive ketones. Mechanistic investigations, including experimental studies and density functional theory (DFT) calculations, shed light on the reaction mechanism and elucidate the basis of the regioselectivity.
Collapse
Affiliation(s)
- Qing-Zhu Li
- Anti-infective Agent Creation Engineering Research Centre of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu 610106, China
| | - Mei-Hao He
- Anti-infective Agent Creation Engineering Research Centre of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu 610106, China
| | - Rong Zeng
- Anti-infective Agent Creation Engineering Research Centre of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu 610106, China
| | - Yuan-Yuan Lei
- Anti-infective Agent Creation Engineering Research Centre of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu 610106, China
| | - Zhao-Yuan Yu
- Anti-infective Agent Creation Engineering Research Centre of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu 610106, China
| | - Min Jiang
- Anti-infective Agent Creation Engineering Research Centre of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu 610106, China
| | - Xiang Zhang
- Anti-infective Agent Creation Engineering Research Centre of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu 610106, China
| | - Jun-Long Li
- Anti-infective Agent Creation Engineering Research Centre of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu 610106, China
| |
Collapse
|
38
|
Abstract
Retrosynthetic simplicity is introduced as a metric by which methods can be evaluated. An argument in favor of reactions which are retrosynthetically simple is put forward, and recent examples in the context of skeletal editing from my own laboratory as well as contributions from others are analyzed critically through this lens.
Collapse
Affiliation(s)
- Mark D Levin
- Department of Chemistry, University of Chicago, Chicago, IL 60637, USA
| |
Collapse
|
39
|
Boswell BR, Zhao Z, Gonciarz RL, Pandya KM. Regioselective Pyridine to Benzene Edit Inspired by Water-Displacement. J Am Chem Soc 2024; 146:19660-19666. [PMID: 38996188 DOI: 10.1021/jacs.4c05999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/14/2024]
Abstract
Late-stage derivatization of drug-like functional groups can accelerate drug discovery efforts by swiftly exchanging hydrogen-bond donors with acceptors, or by modulating key physicochemical properties like logP, solubility, or polar surface area. A proven derivatization strategy to improve ligand potency is to extend the ligand to displace water molecules that are mediating the interactions with a receptor. Inspired by this application, we developed a method to regioselectively transmute the nitrogen atom from pyridine into carbon bearing an ester, a flexible functional group handle. We applied this method to a variety of substituted pyridines, as well as late-stage transformation of FDA-approved drugs.
Collapse
Affiliation(s)
- Benjamin R Boswell
- Discovery Chemistry, Exelixis Inc., Alameda, California 94502, United States
| | - Zhensheng Zhao
- Discovery Chemistry, Exelixis Inc., Alameda, California 94502, United States
| | - Ryan L Gonciarz
- Discovery Chemistry, Exelixis Inc., Alameda, California 94502, United States
| | - Keyur M Pandya
- Pharmaceutical Operations & Supply Chain, Exelixis Inc., Alameda, California 94502, United States
| |
Collapse
|
40
|
Giricheva MA, Vorobiev IG, Belikov AA, Fukin GK, Budruev AV. Synthesis of 1,3-Dicarbonyl Azepines via Photoinitiated Reactions of Aryl Azides with Carbon-Based Nucleophiles. J Org Chem 2024; 89:10283-10292. [PMID: 38981920 DOI: 10.1021/acs.joc.4c01177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/11/2024]
Abstract
A photoinduced one-pot method for the synthesis of azepines by the reaction of aryl azides with 1,3-dicarbonyl compounds under weakly basic conditions is described. This method offers a simple route for the synthesis of 1,3-dicarbonyl-substituted azepines in good to excellent yields and high regioselectivity and was tested on 1,3-dicarbonyl compounds with different acidity levels. The resulting azepines have electrophilic and nucleophilic centers of varying degrees of activity, which facilitate reactions leading to further structural transformations.
Collapse
Affiliation(s)
- Marina A Giricheva
- Department of Chemistry, Lobachevsky State University of Nizhny Novgorod, 23 Gagarin Avenue, Nizhny Novgorod 603950, Russia
| | - Ivan G Vorobiev
- Department of Chemistry, Lobachevsky State University of Nizhny Novgorod, 23 Gagarin Avenue, Nizhny Novgorod 603950, Russia
| | - Alexey A Belikov
- Institute of Organometallic Chemistry of Russian Academy of Sciences, 49 Tropinina str, Nizhny Novgorod GSP-445, Russia
| | - Georgy K Fukin
- Institute of Organometallic Chemistry of Russian Academy of Sciences, 49 Tropinina str, Nizhny Novgorod GSP-445, Russia
| | - Andrei V Budruev
- Department of Chemistry, Lobachevsky State University of Nizhny Novgorod, 23 Gagarin Avenue, Nizhny Novgorod 603950, Russia
| |
Collapse
|
41
|
Uhlenbruck BJH, Josephitis CM, de Lescure L, Paton RS, McNally A. A deconstruction-reconstruction strategy for pyrimidine diversification. Nature 2024; 631:87-93. [PMID: 38697196 PMCID: PMC11421208 DOI: 10.1038/s41586-024-07474-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Accepted: 04/26/2024] [Indexed: 05/04/2024]
Abstract
Structure-activity relationship (SAR) studies are fundamental to drug and agrochemical development, yet only a few synthetic strategies apply to the nitrogen heteroaromatics frequently encountered in small molecule candidates1-3. Here we present an alternative approach in which we convert pyrimidine-containing compounds into various other nitrogen heteroaromatics. Transforming pyrimidines into their corresponding N-arylpyrimidinium salts enables cleavage into a three-carbon iminoenamine building block, used for various heterocycle-forming reactions. This deconstruction-reconstruction sequence diversifies the initial pyrimidine core and enables access to various heterocycles, such as azoles4. In effect, this approach allows heterocycle formation on complex molecules, resulting in analogues that would be challenging to obtain by other methods. We anticipate that this deconstruction-reconstruction strategy will extend to other heterocycle classes.
Collapse
Affiliation(s)
| | | | - Louis de Lescure
- Department of Chemistry, Colorado State University, Fort Collins, CO, USA
| | - Robert S Paton
- Department of Chemistry, Colorado State University, Fort Collins, CO, USA.
| | - Andrew McNally
- Department of Chemistry, Colorado State University, Fort Collins, CO, USA.
| |
Collapse
|
42
|
Cheng Z, Xu H, Hu Z, Zhu M, Houk KN, Xue XS, Jiao N. Carbene-Assisted Arene Ring-Opening. J Am Chem Soc 2024; 146:16963-16970. [PMID: 38691630 DOI: 10.1021/jacs.4c03634] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2024]
Abstract
Despite the significant achievements in dearomatization and C-H functionalization of arenes, the arene ring-opening remains a largely unmet challenge and is underdeveloped due to the high bond dissociation energy and strong resonance stabilization energy inherent in aromatic compounds. Herein, we demonstrate a novel carbene assisted strategy for arene ring-opening. The understanding of the mechanism by our DFT calculations will stimulate wide application of bulk arene chemicals for the synthesis of value-added polyconjugated chain molecules. Various aryl azide derivatives now can be directly converted into valuable polyconjugated enynes, avoiding traditional synthesis including multistep unsaturated precursors, poor selectivity control, and subsequent transition-metal catalyzed cross-coupling reactions. The simple conditions required were demonstrated in the late-stage modification of complex molecules and fused ring compounds. This chemistry expands the horizons of carbene chemistry and provides a novel pathway for arene ring-opening.
Collapse
Affiliation(s)
- Zengrui Cheng
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, 100191 Beijing, China
| | - Haoran Xu
- Key Laboratory of Fluorine and Nitrogen Chemistry and Advanced Materials, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Zhibin Hu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, 100191 Beijing, China
| | - Minghui Zhu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, 100191 Beijing, China
| | - K N Houk
- Department of Chemistry and Biochemistry, University of California─Los Angeles, Los Angeles, California 90095-1569, United States
| | - Xiao-Song Xue
- Key Laboratory of Fluorine and Nitrogen Chemistry and Advanced Materials, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Ning Jiao
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, 100191 Beijing, China
- State Key Laboratory of Organometallic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
| |
Collapse
|
43
|
Ferrara I, Chesnokov GA, Dittmann S, Blacque O, Sievers S, Gademann K. Formal Single Atom Editing of the Glycosylated Natural Product Fidaxomicin Improves Acid Stability and Retains Antibiotic Activity. JACS AU 2024; 4:2267-2280. [PMID: 38938792 PMCID: PMC11200244 DOI: 10.1021/jacsau.4c00206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Revised: 04/15/2024] [Accepted: 05/06/2024] [Indexed: 06/29/2024]
Abstract
Fidaxomicin (Fdx) constitutes a glycosylated natural product with excellent antibacterial activity against various Gram-positive bacteria but is approved only for Clostridioides difficile infections. Poor water solubility and acid lability preclude its use for other infections. Herein, we describe our strategy to overcome the acid lability by introducing acid-stable S-linked glycosides. We describe the direct, diastereoselective modification of unprotected Fdx without the need to avoid air or moisture. Using our newly established approach, Fdx was converted to the single atom exchanged analogue S-Fdx, in which the acid labile O-glycosidic bond to the noviose sugar was replaced by the acid stable S-glycosidic bond. Studies of the antibacterial activity of a structurally diverse set of thioglycoside derivatives revealed high potency of acyl derivatives of S-Fdx against Clostridioides difficile (MIC range: 0.12-4 μg/mL) and excellent potency against Clostridium perfringens (MIC range: 0.06-0.5 μg/mL).
Collapse
Affiliation(s)
- Isabella Ferrara
- Department
of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zürich, Switzerland
| | - Gleb A. Chesnokov
- Department
of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zürich, Switzerland
| | - Silvia Dittmann
- Department
for Microbial Physiology and Molecular Biology, Institute of Microbiology,
Center for Functional Genomics of Microbes, University of Greifswald, Felix-Hausdorff-Strasse 8, 17489 Greifswald, Germany
| | - Olivier Blacque
- Department
of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zürich, Switzerland
| | - Susanne Sievers
- Department
for Microbial Physiology and Molecular Biology, Institute of Microbiology,
Center for Functional Genomics of Microbes, University of Greifswald, Felix-Hausdorff-Strasse 8, 17489 Greifswald, Germany
| | - Karl Gademann
- Department
of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zürich, Switzerland
| |
Collapse
|
44
|
Heilmann T, Lopez-Soria JM, Ulbrich J, Kircher J, Li Z, Worbs B, Golz C, Mata RA, Alcarazo M. N-(Sulfonio)Sulfilimine Reagents: Non-Oxidizing Sources of Electrophilic Nitrogen Atom for Skeletal Editing. Angew Chem Int Ed Engl 2024; 63:e202403826. [PMID: 38623698 DOI: 10.1002/anie.202403826] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Revised: 04/05/2024] [Accepted: 04/08/2024] [Indexed: 04/17/2024]
Abstract
The one-pot synthesis of λ4-dibenzothiophen-5-imino-N-dibenzothiophenium triflate (1) in multigram scale is reported. This compound reacts with Rh2(esp)2 (esp=α,α,α',α'-tetramethyl-1,3-benzenedipropionic acid) generating a Rh-coordinated sulfonitrene species, which is able to transfer the electrophilic nitrene moiety to olefins. When indenes are used as substrates, isoquinolines are obtained in good yields. We assumed that after formation of the corresponding N-sulfonio aziridine, a ring expansion occurs via selective C-C bond cleavage and concomitant elimination of dibenzothiophene. Unexpectedly, a similar protocol transforms 1-arylcyclobutenes into 1-cyano-1-arylcyclopropanes. Our calculations indicate that aziridination is not favored in this case; instead, sulfilimine-substituted cyclobutyl carbocations are initially formed, and these evolve to the isolated cyclopropanes via ring contraction. Both procedures are operationally simple, tolerate a range of functional groups, including oxidation-sensitive alcohols and aldehydes, and enable the convenient preparation of valuable 15N-labelled products. These results demonstrate the potential of 1 to provide alternative pathways for the selective transfer of N-atoms in organic molecules.
Collapse
Affiliation(s)
- Tobias Heilmann
- Institut für Organische und Biomolekulare Chemie, Georg-August-Universität Göttingen, Tammannstr. 2, D-37077, Göttingen, Germany
| | - Juan M Lopez-Soria
- Institut für Organische und Biomolekulare Chemie, Georg-August-Universität Göttingen, Tammannstr. 2, D-37077, Göttingen, Germany
| | - Johannes Ulbrich
- Institut für Organische und Biomolekulare Chemie, Georg-August-Universität Göttingen, Tammannstr. 2, D-37077, Göttingen, Germany
| | - Johannes Kircher
- Institut für Physikalische Chemie, Georg-August-Universität Göttingen, Tammannstr. 6, D-37077, Göttingen, Germany
| | - Zhen Li
- Department of Chemistry, Shanghai University, 99 Shangda Road, Shanghai, 200444, P. R. China
| | - Brigitte Worbs
- Institut für Organische und Biomolekulare Chemie, Georg-August-Universität Göttingen, Tammannstr. 2, D-37077, Göttingen, Germany
| | - Christopher Golz
- Institut für Organische und Biomolekulare Chemie, Georg-August-Universität Göttingen, Tammannstr. 2, D-37077, Göttingen, Germany
| | - Ricardo A Mata
- Institut für Physikalische Chemie, Georg-August-Universität Göttingen, Tammannstr. 6, D-37077, Göttingen, Germany
| | - Manuel Alcarazo
- Institut für Organische und Biomolekulare Chemie, Georg-August-Universität Göttingen, Tammannstr. 2, D-37077, Göttingen, Germany
| |
Collapse
|
45
|
Li L, Wang D, Zhang Y, Liu J, Wang H, Luan X. Diversification of Naphthol Skeletons Triggered by Aminative Dearomatization. Org Lett 2024; 26:4910-4915. [PMID: 38818971 DOI: 10.1021/acs.orglett.4c01416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2024]
Abstract
A silver-catalyzed aminative dearomatization of naphthols has been developed and integrated into a stepwise approach for subsequent skeletal diversifications including ring expansion, ring opening, ring contraction, and atom transmutation of aryl scaffolds. This approach enables the synthesis of a diverse array of azepinones, unsaturated amides, isoquinolines, and indenones from naphthol substrates. Its application in the synthesis of bioactive and functional molecules as well as the conversion of complex molecular skeletons underscores its broad potential applicability. Mechanistic investigations suggest the intermediacy of the dearomatized intermediates.
Collapse
Affiliation(s)
- Linqiang Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710127, China
| | - Dong Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710127, China
| | - Yue Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710127, China
| | - Jingjing Liu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710127, China
| | - Han Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710127, China
| | - Xinjun Luan
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an 710127, China
| |
Collapse
|
46
|
Yang Y, Song Q, Sivaguru P, Liu Z, Shi D, Tian T, de Ruiter G, Bi X. Controllable Skeletal and Peripheral Editing of Pyrroles with Vinylcarbenes. Angew Chem Int Ed Engl 2024; 63:e202401359. [PMID: 38597885 DOI: 10.1002/anie.202401359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 03/14/2024] [Accepted: 04/09/2024] [Indexed: 04/11/2024]
Abstract
The skeletal editing of azaarenes through insertion, deletion, or swapping of single atoms has recently gained considerable momentum in chemical synthesis. Here, we describe a practical skeletal editing strategy using vinylcarbenes in situ generated from trifluoromethyl vinyl N-triftosylhydrazones, leading to the first dearomative skeletal editing of pyrroles through carbon-atom insertion. Furthermore, depending on the used catalyst and substrate, three types of peripheral editing reactions of pyrroles are also disclosed: α- or γ-selective C-H insertion, and [3+2] cycloaddition. These controllable molecular editing reactions provide a powerful platform for accessing medicinally relevant CF3-containing N-heterocyclic frameworks, such as 2,5-dihydropyridines, piperidines, azabicyclo[3.3.0]octadienes, and allylated pyrroles from readily available pyrroles. Mechanistic insights from experiments and density functional theory (DFT) calculations shed light on the origin of substrate- or catalyst-controlled chemo- and regioselectivity as well as the reaction mechanism.
Collapse
Affiliation(s)
- Yong Yang
- Department of Chemistry, Northeast Normal University, Changchun, 130024, China
| | - Qingmin Song
- Department of Chemistry, Northeast Normal University, Changchun, 130024, China
| | | | - Zhaohong Liu
- Department of Chemistry, Northeast Normal University, Changchun, 130024, China
| | - Dan Shi
- Department of Chemistry, Northeast Normal University, Changchun, 130024, China
| | - Tian Tian
- Department of Chemistry, Northeast Normal University, Changchun, 130024, China
| | - Graham de Ruiter
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technol-ogy Technion City, 3200008, Haifa, Israel
| | - Xihe Bi
- Department of Chemistry, Northeast Normal University, Changchun, 130024, China
- State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin, 300071, China
| |
Collapse
|
47
|
Yount J, Morris M, Henson N, Zeller M, Byrd EFC, Piercey DG. Sequential, Electrochemical-Photochemical Synthesis of 1,2,4-Triazolo-[4,3-a]pyrazines. Chemistry 2024; 30:e202400661. [PMID: 38570880 DOI: 10.1002/chem.202400661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2024] [Revised: 03/21/2024] [Accepted: 03/22/2024] [Indexed: 04/05/2024]
Abstract
1,2,4-triazolo-[4,3-a]pyrazine was prepared via a two-step electrochemical, photochemical process. First, a 5-substituted tetrazole is electrochemically coupled to 2,6-dimethoxypyrazine to yield 1,5- and 2,5- disubstituted tetrazoles. Subsequent photochemical excitation of the 2,5-disubstituted tetrazole species using an ultraviolet lamp releases nitrogen gas and produces a short-lived nitrilimine intermediate. Subsequent cyclization of the nitrilimine intermediate yields a 1,2,4-triazolo-[4,3-a]pyrazine backbone. The scope of this reaction was explored using various tetrazoles and pyrazines. Materials produced were identified using chemical analytical techniques and computationally studied for potential application as an insensitive energetic material.
Collapse
Affiliation(s)
- Joseph Yount
- School of Materials Engineering, Purdue University, 205 Gates Road, West Lafayette, IN, 47906, USA
- Purdue Energetics Research Center, Purdue University 2, 05 Gates Road, West Lafayette, IN, 47906, USA
| | - Megan Morris
- Department of Pharmacy Practice, Purdue University, 575 Stadium Mall Dr, West Lafayette, IN, 47907, USA
| | - Noah Henson
- Department of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, IN, 47906, USA
| | - Matthias Zeller
- Department of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, IN, 47906, USA
| | - Edward F C Byrd
- Detonation Sciences & Modeling Branch, DEVCOM Army Research Laboratory, Aberdeen Proving Ground, MD, 21005, USA
| | - Davin G Piercey
- School of Materials Engineering, Purdue University, 205 Gates Road, West Lafayette, IN, 47906, USA
- Purdue Energetics Research Center, Purdue University 2, 05 Gates Road, West Lafayette, IN, 47906, USA
- School of Mechanical Engineering, Purdue University, 585 Purdue Mall, West Lafayette, IN, 47906, USA
| |
Collapse
|
48
|
Falcone NA, He S, Hoskin JF, Mangat S, Sorensen EJ. N-Oxide-to-Carbon Transmutations of Azaarene N-Oxides. Org Lett 2024; 26:4280-4285. [PMID: 38739528 DOI: 10.1021/acs.orglett.4c01263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2024]
Abstract
Reactions that change the identity of an atom within a ring system are emerging as valuable tools for the site-selective editing of molecular structures. Herein, we describe the expansion of an underdeveloped transformation that directly converts azaarene-derived N-oxides to all-carbon arenes. This ring transmutation exhibits good functional group tolerance and replaces the N-oxide moiety with either unsubstituted, substituted, or isotopically labeled carbon atoms in a single laboratory operation.
Collapse
Affiliation(s)
- Nicholas A Falcone
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Sam He
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - John F Hoskin
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Sandeep Mangat
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Erik J Sorensen
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| |
Collapse
|
49
|
Di Terlizzi L, Nicchio L, Protti S, Fagnoni M. Visible photons as ideal reagents for the activation of coloured organic compounds. Chem Soc Rev 2024; 53:4926-4975. [PMID: 38596901 DOI: 10.1039/d3cs01129a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/11/2024]
Abstract
In recent decades, the traceless nature of visible photons has been exploited for the development of efficient synthetic strategies for the photoconversion of colourless compounds, namely, photocatalysis, chromophore activation, and the formation of an electron donor/acceptor (EDA) complex. However, the use of photoreactive coloured organic compounds is the optimal strategy to boost visible photons as ideal reagents in synthetic protocols. In view of such premises, the present review aims to provide its readership with a collection of recent photochemical strategies facilitated via direct light absorption by coloured molecules. The protocols have been classified and presented according to the nature of the intermediate/excited state achieved during the transformation.
Collapse
Affiliation(s)
- Lorenzo Di Terlizzi
- PhotoGreen Lab, Department of Chemistry, University of Pavia, Viale Taramelli 12, 27100 Pavia, Italy.
| | - Luca Nicchio
- PhotoGreen Lab, Department of Chemistry, University of Pavia, Viale Taramelli 12, 27100 Pavia, Italy.
| | - Stefano Protti
- PhotoGreen Lab, Department of Chemistry, University of Pavia, Viale Taramelli 12, 27100 Pavia, Italy.
| | - Maurizio Fagnoni
- PhotoGreen Lab, Department of Chemistry, University of Pavia, Viale Taramelli 12, 27100 Pavia, Italy.
| |
Collapse
|
50
|
Lu H, Zhang Y, Wang XH, Zhang R, Xu PF, Wei H. Carbon-nitrogen transmutation in polycyclic arenol skeletons to access N-heteroarenes. Nat Commun 2024; 15:3772. [PMID: 38704373 PMCID: PMC11069502 DOI: 10.1038/s41467-024-48265-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Accepted: 04/25/2024] [Indexed: 05/06/2024] Open
Abstract
Developing skeletal editing tools is not a trivial task, and realizing the corresponding single-atom transmutation in a ring system without altering the ring size is even more challenging. Here, we introduce a skeletal editing strategy that enables polycyclic arenols, a highly prevalent motif in bioactive molecules, to be readily converted into N-heteroarenes through carbon-nitrogen transmutation. The reaction features selective nitrogen insertion into the C-C bond of the arenol frameworks by azidative dearomatization and aryl migration, followed by ring-opening, and ring-closing (ANRORC) to achieve carbon-to-nitrogen transmutation in the aromatic framework of the arenol. Using widely available arenols as N-heteroarene precursors, this alternative approach allows the streamlined assembly of complex polycyclic heteroaromatics with broad functional group tolerance. Finally, pertinent transformations of the products, including synthesis complex biheteroarene skeletons, were conducted and exhibited significant potential in materials chemistry.
Collapse
Affiliation(s)
- Hong Lu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Yu Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Xiu-Hong Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Ran Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China
| | - Peng-Fei Xu
- State Key Laboratory of Applied Organic Chemistry, College of Chemistry and Chemical Engineering, Lanzhou University, Lanzhou, 730000, China.
| | - Hao Wei
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry & Materials Science, Northwest University, Xi'an, 710069, China.
| |
Collapse
|