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Wang K, Zhang J, Li M, Zhu S, Pan T. From Antagonism to Enhancement: Triton X-100 Surfactant Affects Phenanthrene Interfacial Biodegradation by Mycobacteria through a Shift in Uptake Mechanisms. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:11106-11115. [PMID: 38745419 DOI: 10.1021/acs.langmuir.4c00655] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2024]
Abstract
Polycyclic aromatic hydrocarbons (PAHs), as persistent environmental pollutants, often reside in nonaqueous-phase liquids (NAPLs). Mycobacterium sp. WY10, boasting highly hydrophobic surfaces, can adsorb to the oil-water interface, stabilizing the Pickering emulsion and directly accessing PAHs for biodegradation. We investigated the impact of Triton X-100 (TX100) on this interfacial uptake of phenanthrene (PHE) by Mycobacteria, using n-tetradecane (TET) and bis-(2-ethylhexyl) phthalate (DEHP) as NAPLs. Interfacial tension, phase behavior, and emulsion stability studies, alongside confocal laser scanning microscopy and electron microscope observations, unveiled the intricate interplay. In surfactant-free systems, Mycobacteria formed stable W/O Pickering emulsions, directly degrading PHE within the NAPLs because of their intimate contact. Introducing low-dose TX100 disrupted this relationship. Preferentially binding to the cells, the surfactant drastically increased the cell hydrophobicity, triggering desorption from the interface and phase separation. Consequently, PAH degradation plummeted due to hindered NAPL access. Higher TX100 concentrations flipped the script, creating surfactant-stabilized O/W emulsions devoid of interfacial cells. Surprisingly, PAH degradation remained efficient. This paradox can be attributed to NAPL emulsification, driven by the surfactant, which enhanced mass transfer and brought the substrate closer to the cells, despite their absence at the interface. This study sheds light on the complex effect of surfactants on Mycobacteria and PAH uptake, revealing an antagonistic effect at low concentrations that ultimately leads to enhanced degradation through emulsification at higher doses. These findings offer valuable insights into optimizing bioremediation strategies in PAH-contaminated environments.
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Affiliation(s)
- Kai Wang
- Jiangxi Provincial Key Laboratory of Environmental Pollution Prevention and Control in Mining and Metallurgy, and School of Resource and Environmental Engineering, Jiangxi University of Science and Technology, Ganzhou 341000, China
| | - Jiameng Zhang
- Jiangxi Provincial Key Laboratory of Environmental Pollution Prevention and Control in Mining and Metallurgy, and School of Resource and Environmental Engineering, Jiangxi University of Science and Technology, Ganzhou 341000, China
| | - Meishu Li
- School of Life Sciences, Jiangxi University of Science and Technology, Ganzhou 341000, China
| | - Shuting Zhu
- School of Life Sciences, Jiangxi University of Science and Technology, Ganzhou 341000, China
| | - Tao Pan
- Jiangxi Provincial Key Laboratory of Environmental Pollution Prevention and Control in Mining and Metallurgy, and School of Resource and Environmental Engineering, Jiangxi University of Science and Technology, Ganzhou 341000, China
- School of Life Sciences, Jiangxi University of Science and Technology, Ganzhou 341000, China
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Seagren EA, Hollander DJ, Stahl DA, Rittmann BE. An integrated evaluation of bioenhanced in situ LNAPL dissolution. JOURNAL OF CONTAMINANT HYDROLOGY 2024; 264:104338. [PMID: 38692145 DOI: 10.1016/j.jconhyd.2024.104338] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Revised: 02/29/2024] [Accepted: 03/25/2024] [Indexed: 05/03/2024]
Abstract
Performance evaluation of in situ bioremediation processes in the field is difficult due to uncertainty created by matrix and contaminant heterogeneity, inaccessibility to direct observation, expense of sampling, and limitations of some measurements. The goal of this research was to develop a strategy for evaluating in situ bioremediation of light nonaqueous-phase liquid (LNAPL) contamination and demonstrating the occurrence of bioenhanced LNAPL dissolution by: (1) integrating a suite of analyses into a rational evaluation strategy; and (2) demonstrating the strategy's application in intermediate-scale flow-cell (ISFC) experiments simulating an aquifer contaminated with a pool of LNAPL (naphthalene dissolved in dodecane). Two ISFCs were operated to evaluate how the monitored parameters changed between a "no bioremediation" scenario and an "intrinsic in situ bioremediation" scenario. Key was incorporating different measures of microbial activity and contaminant degradation relevant to bioremediation: contaminant loss; consumption of electron acceptors; and changes in total alkalinity, pH, dissolved total inorganic carbon, carbon-stable isotopes, microorganisms, and intermediate metabolites. These measurements were integrated via mass-flux modeling and mass-balance analyses to document that in situ biodegradation of naphthalene was strongly accelerated in the "intrinsic in situ bioremediation" scenario versus "no bioremediation." Furthermore, the integrated strategy provided consistent evidence of bioenhancement of LNAPL dissolution through intrinsic bioremediation by a factor of approximately 2 due to the biodegradation of the naphthalene near the pool/water interface.
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Affiliation(s)
- Eric A Seagren
- Department of Civil and Environmental Engineering, Northwestern University, Evanston, IL 60208, USA.
| | - David J Hollander
- Department of Earth and Planetary Sciences, Northwestern University, Evanston, IL 60208, USA
| | - David A Stahl
- Department of Civil and Environmental Engineering, Northwestern University, Evanston, IL 60208, USA
| | - Bruce E Rittmann
- Department of Civil and Environmental Engineering, Northwestern University, Evanston, IL 60208, USA
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3
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Biodegradation of Crystalline and Nonaqueous Phase Liquid-Dissolved ATRAZINE by Arthrobacter sp. ST11 with Cd2+ Resistance. Catalysts 2022. [DOI: 10.3390/catal12121653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
A newly isolated cadmium (Cd)-resistant bacterial strain from herbicides-polluted soil in China could use atrazine as the sole carbon, nitrogen, and energy source for growth in a mineral salt medium (MSM). Based on 16S rRNA gene sequence analysis and physiochemical tests, the bacterium was identified as Arthrobacter sp. and named ST11. The biodegradation of atrazine by ST11 was investigated in experiments, with the compound present either as crystals or dissolved in di(2-ethylhexyl) phthalate (DEHP) as a non-aqueous phase liquid (NAPL). After 48 h, ST11 consumed 68% of the crystalline atrazine in MSM. After being dissolved in DEHP, the degradation ratio of atrazine was reduced to 55% under the same conditions. Obviously, the NAPL-dissolved atrazine has lower bioavailability than the crystalline atrazine. Cd2+ at concentrations of 0.05–1.5 mmol/L either had no effect (<0.3 mmol/L), slight effects (0.5–1.0 mmol/L), or significantly (1.5 mmol/L) inhibited the growth of ST11 in Luria-Bertani medium. Correspondingly, in the whole concentration range (0.05–1.5 mmol/L), Cd2+ promoted ST11 to degrade atrazine, whether crystalline or dissolved in DEHP. Refusal to adsorb Cd2+ may be the main mechanism of high Cd resistance in ST11 cells. These results may provide valuable insights for the microbial treatment of arable soil co-polluted by atrazine and Cd.
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Cavelan A, Golfier F, Colombano S, Davarzani H, Deparis J, Faure P. A critical review of the influence of groundwater level fluctuations and temperature on LNAPL contaminations in the context of climate change. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 806:150412. [PMID: 34562757 DOI: 10.1016/j.scitotenv.2021.150412] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Revised: 08/27/2021] [Accepted: 09/13/2021] [Indexed: 06/13/2023]
Abstract
The intergovernmental panel on climate change (IPCC) predicts significant changes in precipitation patterns, an increase in temperature, and groundwater level variations by 2100. These changes are expected to alter light non-aqueous phase liquid (LNAPL) impacts since groundwater level fluctuations and temperature are known to influence both the mobility and release of LNAPL compounds to air and groundwater. Knowledge of these potential effects is currently dispersed in the literature, hindering a clear vision of the processes at play. This review aims to synthesize and discuss the possible effects of the increase in temperature and groundwater level fluctuations on the behavior of LNAPL and its components in a climate change context. In summary, a higher amplitude of groundwater table variations and higher temperatures will probably increase biodegradation processes, the LNAPL mobility, and spreading across the smear zone, favoring the release of LNAPL compounds to the atmosphere and groundwater but decreasing the LNAPL mass and its longevity. Outcomes will, nevertheless, vary greatly across arid, cold, or humid coastal environments, where different effects of climate change are expected. The effects of the climate change factors linked to soil heterogeneities, local conditions, and weathering processes will govern LNAPL behavior and need to be further clarified.
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Affiliation(s)
- Amélie Cavelan
- Université de Lorraine, CNRS, LIEC, F-54000 Nancy, France.
| | - Fabrice Golfier
- Université de Lorraine, CNRS, GeoRessources, F-54000 Nancy, France
| | | | | | | | - Pierre Faure
- Université de Lorraine, CNRS, LIEC, F-54000 Nancy, France
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5
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Akbari A, Kasprzyk A, Galvez R, Ghoshal S. A rhamnolipid biosurfactant increased bacterial population size but hindered hydrocarbon biodegradation in weathered contaminated soils. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 778:145441. [PMID: 33725602 DOI: 10.1016/j.scitotenv.2021.145441] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2020] [Revised: 01/20/2021] [Accepted: 01/22/2021] [Indexed: 06/12/2023]
Abstract
Surfactants are used to enhance the bioavailability of recalcitrant residual petroleum contamination during bioremediation. However, surfactants in some cases inhibit biodegradation, which is often attributed to their toxicity. Herein, we show that a rhamnolipid biosurfactant likely served as a carbon source and exhibited physiological inhibition on petroleum biodegradation. The addition of biosurfactants in mixed, batch, slurry bioreactors with soils from a petroleum-contaminated site led to a dose-dependent shift in the microbial community with a decrease in diversity and increase in population size and delayed biodegradation. Microbial community analysis indicated the enrichment of Alphaproteobacteria affiliated taxa such as Sphingomonadaceae in systems amended with biosurfactant. The diversity was significantly lower in systems with higher doses of biosurfactants compared to systems without biosurfactant. Droplet Digital PCR indicated a 30-90 fold increase in 16S rRNA copy numbers in systems with higher doses of biosurfactant than control systems without surfactant and nutrients, whereas the nutrient amendment alone led to a two-fold increase in population size. Total petroleum hydrocarbon analysis showed that the biodegradation extent was negatively impacted by rhamnolipid at the highest dose compared to lower doses (23% vs. 40%) or without the biosurfactant. Indigenous isolates cultivated from the oil-amended soil exhibited growth on rhamnolipid as a sole carbon source. A novel insight gained is how dose-dependent responses of microbial communities to biosurfactants alter the biodegradation time profile of hydrocarbons. The study highlights the significance of microbial assessment prior to surfactant-mediated bioremediation practices.
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Affiliation(s)
- Ali Akbari
- Department of Civil Engineering, McGill University, Montreal, Quebec H3A 0C3, Canada.
| | - Aleksandra Kasprzyk
- Department of Civil Engineering, McGill University, Montreal, Quebec H3A 0C3, Canada
| | - Rosa Galvez
- Department of Civil and Water Engineering, Laval University, Quebec, Quebec G1V 0A6, Canada
| | - Subhasis Ghoshal
- Department of Civil Engineering, McGill University, Montreal, Quebec H3A 0C3, Canada
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6
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Influence of Triton X-100 and β-cyclodextrin on the bioavailability and biodegradation of crystalline phenanthrene covered with biofilms. Process Biochem 2021. [DOI: 10.1016/j.procbio.2020.12.019] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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7
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Influence of Triton X-100 and β-cyclodextrin on the bioavailability and biodegradation of crystalline phenanthrene covered with biofilms. Process Biochem 2021. [DOI: 10.1016/j.procbio.2021.01.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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8
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Sivadon P, Barnier C, Urios L, Grimaud R. Biofilm formation as a microbial strategy to assimilate particulate substrates. ENVIRONMENTAL MICROBIOLOGY REPORTS 2019; 11:749-764. [PMID: 31342619 DOI: 10.1111/1758-2229.12785] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Revised: 07/15/2019] [Accepted: 07/21/2019] [Indexed: 06/10/2023]
Abstract
In most ecosystems, a large part of the organic carbon is not solubilized in the water phase. Rather, it occurs as particles made of aggregated hydrophobic and/or polymeric natural or man-made organic compounds. These particulate substrates are degraded by extracellular digestion/solubilization implemented by heterotrophic bacteria that form biofilms on them. Organic particle-degrading biofilms are widespread and have been observed in aquatic and terrestrial natural ecosystems, in polluted and man-driven environments and in the digestive tracts of animals. They have central ecological functions as they are major players in carbon recycling and pollution removal. The aim of this review is to highlight bacterial adhesion and biofilm formation as central mechanisms to exploit the nutritive potential of organic particles. It focuses on the mechanisms that allow access and assimilation of non-dissolved organic carbon, and considers the advantage provided by biofilms for gaining a net benefit from feeding on particulate substrates. Cooperative and competitive interactions taking place in biofilms feeding on particulate substrates are also discussed.
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Affiliation(s)
- Pierre Sivadon
- CNRS/Université de Pau et des Pays de l'Adour/E2S UPPA, Institut des Sciences Analytiques et de Physico-Chimie pour l'Environnement et les Matériaux UMR5254, Pau, 64000, France
| | - Claudie Barnier
- CNRS/Université de Pau et des Pays de l'Adour/E2S UPPA, Institut des Sciences Analytiques et de Physico-Chimie pour l'Environnement et les Matériaux UMR5254, Pau, 64000, France
| | - Laurent Urios
- CNRS/Université de Pau et des Pays de l'Adour/E2S UPPA, Institut des Sciences Analytiques et de Physico-Chimie pour l'Environnement et les Matériaux UMR5254, Pau, 64000, France
| | - Régis Grimaud
- CNRS/Université de Pau et des Pays de l'Adour/E2S UPPA, Institut des Sciences Analytiques et de Physico-Chimie pour l'Environnement et les Matériaux UMR5254, Pau, 64000, France
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9
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Marozava S, Meyer AH, Pérez-de-Mora A, Gharasoo M, Zhuo L, Wang H, Cirpka OA, Meckenstock RU, Elsner M. Mass Transfer Limitation during Slow Anaerobic Biodegradation of 2-Methylnaphthalene. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2019; 53:9481-9490. [PMID: 31262174 DOI: 10.1021/acs.est.9b01152] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Affiliation(s)
- Sviatlana Marozava
- Institute of Groundwater Ecology, Helmholtz Zentrum München-German Research Center for Environmental Health, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany
| | - Armin H. Meyer
- Institute of Groundwater Ecology, Helmholtz Zentrum München-German Research Center for Environmental Health, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany
| | - Alfredo Pérez-de-Mora
- Institute of Groundwater Ecology, Helmholtz Zentrum München-German Research Center for Environmental Health, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany
| | - Mehdi Gharasoo
- Institute of Groundwater Ecology, Helmholtz Zentrum München-German Research Center for Environmental Health, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany
- University of Waterloo, Department of Earth and Environmental Sciences, Ecohydrology, 200 University Avenue West, Waterloo, Ontario N2L 3G1, Canada
| | - Lin Zhuo
- Institute of Groundwater Ecology, Helmholtz Zentrum München-German Research Center for Environmental Health, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany
| | - He Wang
- Institute of Groundwater Ecology, Helmholtz Zentrum München-German Research Center for Environmental Health, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany
| | - Olaf A. Cirpka
- University of Tübingen, Center for Applied Geoscience, Hölderlinstrasse 12, 72074 Tübingen, Germany
| | - Rainer U. Meckenstock
- University Duisburg-Essen, Biofilm Centre, Universitätsstrasse 5, D-45141 Essen, Germany
| | - Martin Elsner
- Institute of Groundwater Ecology, Helmholtz Zentrum München-German Research Center for Environmental Health, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany
- Technical University of Munich, Chair of Analytical Chemistry and Water Chemistry, Marchioninistrasse 17, 81377 Munich, Germany
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Pan T, Wang R, Xiao K, Ye W, Dong W, Xu M. Continuous degradation of phenanthrene in cloud point system by reuse of Sphingomonas polyaromaticivorans cells. AMB Express 2019; 9:8. [PMID: 30661204 PMCID: PMC6339633 DOI: 10.1186/s13568-019-0736-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2019] [Accepted: 01/11/2019] [Indexed: 11/10/2022] Open
Abstract
Extractive biodegradation of phenanthrene by Sphingomonas polyaromaticivorans was previously carried out in cloud point system (CPS). In this study, we explored the possibility of further increasing the efficiency of the culture by repeatedly reusing cells and the system for biodegradation. Three different recycling strategies were adopted. In reuse of cells plus CPS, cells were reused for 3 times while maintaining high degradation rates (> 90%). Thereafter, the accumulation of metabolites in the dilute phase resulted in a decrease in cell viability. This inhibition was avoided in recycling the cells plus coacervate phase by replacing the dilute phase with fresh Medium. However, due to the slow adaptation of the cells to the new degradation environment and the reduction in the volume of the coacervate phase, the cells were only reused twice and their activity decreased. However, the same long degradation cycle (5 days) as the reuse of cells plus coacervate phase reduced the overall degradation efficiency of phenanthrene. Finally, a combined strategy of 3 times of cells plus CPS reuse and individual cells reuse once was employed and run for two cycles. 3 rounds of reuse of cells plus CPS improved cells utilization and phenanthrene degradation efficiency. Then, the subsequent round of reuse of cells alone relieved the effect of increasing metabolites on cell viability. This study provides a potential application for reusing cells to continuously degrade phenanthrene in soil and water in CPS.
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11
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Jimenez-Sanchez C, Wick LY, Ortega-Calvo JJ. Impact of Chemoeffectors on Bacterial Motility, Transport, and Contaminant Degradation in Sand-Filled Percolation Columns. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018; 52:10673-10679. [PMID: 30113820 DOI: 10.1021/acs.est.8b02370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Chemoeffector-mediated bacterial motility and tactic swimming are major drivers for contaminant accessibility and biodegradation at submillimeter scales. In sand-filled percolated columns we tested how and to what degree chemoeffectors influenced bacterial transport and thereby promoted accessibility and degradation of distantly located 14C-naphthalene (NAH) at the centimeter scale. Sunflower root exudates and silver nanoparticles (AgNPs) were used as chemoeffectors to stimulate opposing effects of motility and tactic swimming of NAH-degrading Pseudomonas putida G7. Sunflower exudates prompted smooth bacterial movement and positive taxis, while AgNPs induced tortuous movement and repellent responses. Compared to chemoeffector-free controls exudates reduced deposition and stimulated bacterial transport during percolation experiments. AgNPs, however, provoked bacterial deposition and concomitant saturation of the collector surfaces (filter blocking) that led to progressively increased percolation of cells. Despite mechanistic differences, both motility patterns supported bacterial transport and promoted mineralization rates of NAH desorbing from a source placed at the column outlet. Observed mineralization rates in the presence of the chemoeffectors were 5-fold higher than those in their absence and similar to NAH-mineralization in well-stirred batch assays. Our results indicate that chemically mediated, small-scale bacterial motility patterns may become relevant for long-distance bacterial transport and the biodegradation of patchy contaminants at higher scales, respectively.
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Affiliation(s)
- Celia Jimenez-Sanchez
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS-CSIC) , Avenida Reina Mercedes, 10 , E-41012 - Seville , Spain
| | - Lukas Y Wick
- UFZ Helmholtz Centre for Environmental Research , Permosertraße 15 , D-04318 Leipzig , Germany
| | - Jose-Julio Ortega-Calvo
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS-CSIC) , Avenida Reina Mercedes, 10 , E-41012 - Seville , Spain
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12
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Ghosal D, Ghosh S, Dutta TK, Ahn Y. Current State of Knowledge in Microbial Degradation of Polycyclic Aromatic Hydrocarbons (PAHs): A Review. Front Microbiol 2016; 7:1369. [PMID: 27630626 PMCID: PMC5006600 DOI: 10.3389/fmicb.2016.01369] [Citation(s) in RCA: 249] [Impact Index Per Article: 31.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2016] [Accepted: 08/18/2016] [Indexed: 12/22/2022] Open
Abstract
Polycyclic aromatic hydrocarbons (PAHs) include a group of organic priority pollutants of critical environmental and public health concern due to their toxic, genotoxic, mutagenic and/or carcinogenic properties and their ubiquitous occurrence as well as recalcitrance. The increased awareness of their various adverse effects on ecosystem and human health has led to a dramatic increase in research aimed toward removing PAHs from the environment. PAHs may undergo adsorption, volatilization, photolysis, and chemical oxidation, although transformation by microorganisms is the major neutralization process of PAH-contaminated sites in an ecologically accepted manner. Microbial degradation of PAHs depends on various environmental conditions, such as nutrients, number and kind of the microorganisms, nature as well as chemical property of the PAH being degraded. A wide variety of bacterial, fungal and algal species have the potential to degrade/transform PAHs, among which bacteria and fungi mediated degradation has been studied most extensively. In last few decades microbial community analysis, biochemical pathway for PAHs degradation, gene organization, enzyme system, genetic regulation for PAH degradation have been explored in great detail. Although, xenobiotic-degrading microorganisms have incredible potential to restore contaminated environments inexpensively yet effectively, but new advancements are required to make such microbes effective and more powerful in removing those compounds, which were once thought to be recalcitrant. Recent analytical chemistry and genetic engineering tools might help to improve the efficiency of degradation of PAHs by microorganisms, and minimize uncertainties of successful bioremediation. However, appropriate implementation of the potential of naturally occurring microorganisms for field bioremediation could be considerably enhanced by optimizing certain factors such as bioavailability, adsorption and mass transfer of PAHs. The main purpose of this review is to provide an overview of current knowledge of bacteria, halophilic archaea, fungi and algae mediated degradation/transformation of PAHs. In addition, factors affecting PAHs degradation in the environment, recent advancement in genetic, genomic, proteomic and metabolomic techniques are also highlighted with an aim to facilitate the development of a new insight into the bioremediation of PAH in the environment.
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Affiliation(s)
- Debajyoti Ghosal
- Environmental Engineering Laboratory, Department of Civil Engineering, Yeungnam UniversityGyeongsan, South Korea
| | - Shreya Ghosh
- Disasters Prevention Research Institute, Yeungnam UniversityGyeongsan, South Korea
| | - Tapan K. Dutta
- Department of Microbiology, Bose InstituteKolkata, India
| | - Youngho Ahn
- Environmental Engineering Laboratory, Department of Civil Engineering, Yeungnam UniversityGyeongsan, South Korea
- Disasters Prevention Research Institute, Yeungnam UniversityGyeongsan, South Korea
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13
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Comparison of bacterial and archaeal communities in depth-resolved zones in an LNAPL body. Appl Microbiol Biotechnol 2015; 100:3347-60. [PMID: 26691516 DOI: 10.1007/s00253-015-7106-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2015] [Revised: 10/13/2015] [Accepted: 10/15/2015] [Indexed: 10/22/2022]
Abstract
Advances in our understanding of the microbial ecology at sites impacted by light non-aqueous phase liquids (LNAPLs) are needed to drive development of optimized bioremediation technologies, support longevity models, and develop culture-independent molecular tools. In this study, depth-resolved characterization of geochemical parameters and microbial communities was conducted for a shallow hydrocarbon-impacted aquifer. Four distinct zones were identified based on microbial community structure and geochemical data: (i) an aerobic, low-contaminant mass zone at the top of the vadose zone; (ii) a moderate to high-contaminant mass, low-oxygen to anaerobic transition zone in the middle of the vadose zone; (iii) an anaerobic, high-contaminant mass zone spanning the bottom of the vadose zone and saturated zone; and (iv) an anaerobic, low-contaminant mass zone below the LNAPL body. Evidence suggested that hydrocarbon degradation is mediated by syntrophic fermenters and methanogens in zone III. Upward flux of methane likely contributes to promoting anaerobic conditions in zone II by limiting downward flux of oxygen as methane and oxygen fronts converge at the top of this zone. Observed sulfate gradients and microbial communities suggested that sulfate reduction and methanogenesis both contribute to hydrocarbon degradation in zone IV. Pyrosequencing revealed that Syntrophus- and Methanosaeta-related species dominate bacterial and archaeal communities, respectively, in the LNAPL body below the water table. Observed phylotypes were linked with in situ anaerobic hydrocarbon degradation in LNAPL-impacted soils.
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14
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Akbari A, Ghoshal S. Bioaccessible Porosity in Soil Aggregates and Implications for Biodegradation of High Molecular Weight Petroleum Compounds. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2015; 49:14368-14375. [PMID: 26522627 DOI: 10.1021/acs.est.5b03618] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
We evaluated the role of soil aggregate pore size on biodegradation of essentially insoluble petroleum hydrocarbons that are biodegraded primarily at the oil-water interface. The size and spatial distribution of pores in aggregates sampled from biodegradation experiments of a clayey, aggregated, hydrocarbon-contaminated soil with relatively high bioremediation end point were characterized by image analyses of X-ray micro-CT scans and N2 adsorption. To determine the bioaccessible pore sizes, we performed separate experiments to assess the ability of hydrocarbon degrading bacteria isolated from the soil to pass through membranes with specific sized pores and to access hexadecane (model insoluble hydrocarbon). Hexadecane biodegradation occurred only when pores were 5 μm or larger, and did not occur when pores were 3 μm and smaller. In clayey aggregates, ∼ 25% of the aggregate volume was attributed to pores larger than 4 μm, which was comparable to that in aggregates from a sandy, hydrocarbon-contaminated soil (~23%) scanned for comparison. The ratio of volumes of inaccessible pores (<4 μm) to bioaccessible pores (>4 μm) in the clayey aggregates was 0.32, whereas in the sandy aggregates it was approximately 10 times lower. The role of soil microstructure on attainable bioremediation end points could be qualitatively assessed in various soils by the aggregate characterization approach outlined herein.
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Affiliation(s)
- Ali Akbari
- Department of Civil Engineering, McGill University , Montreal, Quebec H3A 0C3, Canada
| | - Subhasis Ghoshal
- Department of Civil Engineering, McGill University , Montreal, Quebec H3A 0C3, Canada
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15
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Sungthong R, van West P, Cantos M, Ortega-Calvo JJ. Development of eukaryotic zoospores within polycyclic aromatic hydrocarbon (PAH)-polluted environments: a set of behaviors that are relevant for bioremediation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2015; 511:767-776. [PMID: 25617701 DOI: 10.1016/j.scitotenv.2014.12.089] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2014] [Revised: 12/26/2014] [Accepted: 12/26/2014] [Indexed: 06/04/2023]
Abstract
In this study, we assessed the development (formation, taxis and settlement) of eukaryotic zoospores under different regimes of exposure to polycyclic aromatic hydrocarbons (PAHs), which imitated environmental scenarios of pollution and bioremediation. With this aim, we used an oomycete, Pythium aphanidermatum, as a source of zoospores and two PAH-degrading bacteria (Mycobacterium gilvum VM552 and Pseudomonas putida G7). The oomycete and both bacteria were not antagonistic, and zoospore formation was diminished only in the presence of the highest bacterial cell density (10(8)-10(10) colony-forming units mL(-1)). A negative influence of PAHs on zoospore formation and taxis was observed when PAHs were exposed in combination with organic solutions and polar solvents. Co-exposure of PAHs with non-polar solvents [hexadecane (HD) and 2,2,4,4,6,8,8-heptamethylnonane (HMN)] did not affect zoospore settlement at the interfaces of the organic solvents and water. However, zoospores settled and created mycelial networks only at HD-water interfaces. Both bacteria diminished the toxic influence of PAHs on zoospore formation and taxis, and they did not interrupt zoospore settlement. The results suggest that zoospore development could be applicable for toxicity assessment of PAHs and enhancement of their bioavailability. Microbial interactions during both swimming modes and community formation at pollutant interfaces were revealed as major factors that have potential relevance to bioremediation.
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Affiliation(s)
- Rungroch Sungthong
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS-CSIC), Apartado 1052, 41080 Seville, Spain
| | - Pieter van West
- Aberdeen Oomycete Laboratory, University of Aberdeen, Institute of Medical Sciences, Foresterhill, AB25 2ZD Aberdeen UK
| | - Manuel Cantos
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS-CSIC), Apartado 1052, 41080 Seville, Spain
| | - Jose Julio Ortega-Calvo
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS-CSIC), Apartado 1052, 41080 Seville, Spain.
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Tejeda-Agredano MC, Mayer P, Ortega-Calvo JJ. The effect of humic acids on biodegradation of polycyclic aromatic hydrocarbons depends on the exposure regime. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2014; 184:435-442. [PMID: 24121418 DOI: 10.1016/j.envpol.2013.09.031] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2013] [Revised: 09/15/2013] [Accepted: 09/18/2013] [Indexed: 06/02/2023]
Abstract
Binding of polycyclic aromatic hydrocarbons (PAHs) to dissolved organic matter (DOM) can reduce the freely dissolved concentration, increase apparent solubility or enhance diffusive mass transfer. To study the effects of DOM on biodegradation, we used phenanthrene and pyrene as model PAHs, soil humic acids as model DOM and a soil Mycobacterium strain as a representative degrader organism. Humic acids enhanced the biodegradation of pyrene when present as solid crystals but not when initially dissolved or provided by partitioning from a polymer. Synchronous fluorescence spectrophotometry, scintillation counting and a microscale diffusion technique were applied in order to determine the kinetics of dissolution and diffusive mass transfer of pyrene. We suggest that humic acids can enhance or inhibit biodegradation as a result of the balance of two opposite effects, namely, solubilization of the chemicals on the one hand and inhibition of cell adhesion to the pollutant source on the other.
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Affiliation(s)
- Maria-Carmen Tejeda-Agredano
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS-CSIC), Apartado 1052, E-41080 Seville, Spain; Department of Environmental Science, Aarhus University, P.O. Box 358, 4000 Roskilde, Denmark
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Ortega-Calvo JJ, Tejeda-Agredano MC, Jimenez-Sanchez C, Congiu E, Sungthong R, Niqui-Arroyo JL, Cantos M. Is it possible to increase bioavailability but not environmental risk of PAHs in bioremediation? JOURNAL OF HAZARDOUS MATERIALS 2013; 261:733-45. [PMID: 23583067 DOI: 10.1016/j.jhazmat.2013.03.042] [Citation(s) in RCA: 71] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2012] [Revised: 02/28/2013] [Accepted: 03/16/2013] [Indexed: 05/21/2023]
Abstract
The current poor predictability of end points associated with the bioremediation of polycyclic aromatic hydrocarbons (PAHs) is a large limitation when evaluating its viability for treating contaminated soils and sediments. However, we have seen a wide range of innovations in recent years, such as an the improved use of surfactants, the chemotactic mobilization of bacterial inoculants, the selective biostimulation at pollutant interfaces, rhizoremediation and electrobioremediation, which increase the bioavailability of PAHs but do not necessarily increase the risk to the environment. The integration of these strategies into practical remediation protocols would be beneficial to the bioremediation industry, as well as improve the quality of the environment.
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Affiliation(s)
- J J Ortega-Calvo
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS-CSIC), Apartado 1052, E-41080 Seville, Spain.
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Ortega-Calvo JJ, Marchenko AI, Vorobyov AV, Borovick RV. Chemotaxis in polycyclic aromatic hydrocarbon-degrading bacteria isolated from coal-tar- and oil-polluted rhizospheres. FEMS Microbiol Ecol 2012; 44:373-81. [PMID: 19719618 DOI: 10.1016/s0168-6496(03)00092-8] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
Abstract
Abstract The limited mass transfer in polycyclic aromatic hydrocarbon (PAH)-contaminated soils during bioremediation treatments often impedes the achievement of regulatory decontamination end-points. Little is known about bioavailability of these hydrophobic pollutants in phytoremediation systems. This work attempts to evaluate, for the first time, chemotaxis as a bioavailability-promoting trait in PAH-degrading bacteria from the rhizosphere. For this aim, 20 motile strains capable of degrading different PAHs were isolated from rhizosphere soils contaminated with coal tar and oil. Three representative Pseudomonas strains were selected, on the basis of their faster growth and/or range of PAHs degraded, for detailed chemotaxis studies with PAHs (naphthalene, phenanthrene, anthracene, and pyrene), bacterial lipopolysaccharide and root exudates from seven different plants. The chemotactic response was quantified with a new densitometric method. The results indicate that chemotaxis is a relevant mobilizing factor for PAH-degrading rhizosphere bacteria.
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Affiliation(s)
- J J Ortega-Calvo
- Instituto de Recursos Naturales y Agrobiología, CSIC, Avenida Reina Mercedes 10, E-41080 Sevilla, Spain
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Abbasnezhad H, Gray M, Foght JM. Influence of adhesion on aerobic biodegradation and bioremediation of liquid hydrocarbons. Appl Microbiol Biotechnol 2011; 92:653-75. [DOI: 10.1007/s00253-011-3589-4] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2011] [Revised: 08/27/2011] [Accepted: 09/15/2011] [Indexed: 01/14/2023]
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Petersen EJ, Tang J, Weber WJ. Effects of aging and mixed nonaqueous-phase liquid sources in soil systems on earthworm bioaccumulation, microbial degradation, sequestration, and aqueous desorption of pyrene. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2011; 30:988-996. [PMID: 21309023 DOI: 10.1002/etc.470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2010] [Revised: 09/13/2010] [Accepted: 11/26/2010] [Indexed: 05/30/2023]
Abstract
The effects of loading and aging pyrene in soils in the presence of four environmentally common nonaqueous-phase liquids (NAPLs) (hexadecane, 2,2,4,4,6,8,8-heptamethylnonane [HMN], toluene, and dimethyl phthalate [DMP]) on its subsequent desorption from those soils, earthworm accumulation, biodegradation, and extractability were tested by using two dissimilar soils. The presence of each of the four NAPLs increased fractions and rates of pyrene desorption, and hexadecane slowed the effects of aging on these same parameters. Loading with hexadecane and HMN caused earthworm accumulation of pyrene to decrease. These results contrast with generally observed faster desorption rates resulting from NAPL addition, suggesting that additional factors (e.g., association of pyrene with NAPL phases and NAPL toxicities to earthworms) may impact bioaccumulation. The presence of HMN and toluene increased pyrene biodegradation, whereas hexadecane and DMP had the opposite effects. These results correlate with changes in the extractability of pyrene from the soils. After aging and biodegradation, hexadecane and DMP substantially increased pyrene residues extractable by methanol and decreased nonextractable fractions, whereas HMN and toluene had the opposite effects.
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Affiliation(s)
- Elijah J Petersen
- Department of Chemical Engineering, The University of Michigan, Ann Arbor, Michigan, USA
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Bueno-Montes M, Springael D, Ortega-Calvo JJ. Effect of a nonionic surfactant on biodegradation of slowly desorbing PAHs in contaminated soils. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2011; 45:3019-3026. [PMID: 21375290 DOI: 10.1021/es1035706] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
The influence of the nonionic surfactant Brij 35 on biodegradation of slowly desorbing polycyclic aromatic hydrocarbons (PAHs) was determined in contaminated soils. We employed a soil originated from a creosote-polluted site, and a manufactured gas plant soil that had been treated by bioremediation. The two soils differed in their total content in five indicator 3-, 4-, and 5-ring PAHs (2923 mg kg(-1) and 183 mg kg(-1) in the creosote-polluted and bioremediated soils, respectively) but had a similar content (140 mg kg(-1) vs 156 mg kg(-1)) of slowly desorbing PAHs. The PAHs present in the bioremediated soil were highly recalcitrant. The surfactant at a concentration above its critical micelle concentration enhanced the biodegradation of slowly desorbing PAHs in suspensions of both soils, but it was especially efficient with bioremediated soil, causing a 62% loss of the total PAH content. An inhibition of biodegradation was observed with the high-molecular-weight PAHs pyrene and benzo[a]pyrene in the untreated soil, possibly due to competition effects with other solubilized PAHs present at relatively high concentrations. We suggest that nonionic surfactants may improve bioremediation performance with soils that have previously undergone extensive bioremediation to enrich for a slowly desorbing profile.
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Affiliation(s)
- Marisa Bueno-Montes
- Instituto de Recursos Naturales y Agrobiología, C.S.I.C., Apartado 1052, E-41080-Seville, Spain
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Tejeda-Agredano MC, Gallego S, Niqui-Arroyo JL, Vila J, Grifoll M, Ortega-Calvo JJ. Effect of interface fertilization on biodegradation of polycyclic aromatic hydrocarbons present in nonaqueous-phase liquids. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2011; 45:1074-1081. [PMID: 21166450 DOI: 10.1021/es102418u] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
The main goal of this study was to use an oleophilic biostimulant (S-200) to target possible nutritional limitations for biodegradation of polycyclic aromatic hydrocarbons (PAHs) at the interface between nonaqueous-phase liquids (NAPLs) and the water phase. Biodegradation of PAHs present in fuel-containing NAPLs was slow and followed zero-order kinetics, indicating bioavailability restrictions. The biostimulant enhanced the biodegradation, producing logistic (S-shaped) kinetics and 10-fold increases in the rate of mineralization of phenanthrene, fluoranthene, and pyrene. Chemical analysis of residual fuel oil also evidenced an enhanced biodegradation of the alkyl-PAHs and n-alkanes. The enhancement was not the result of an increase in the rate of partitioning of PAHs into the aqueous phase, nor was it caused by the compensation of any nutritional deficiency in the medium. We suggest that biodegradation of PAH by bacteria attached to NAPLs can be limited by nutrient availability due to the simultaneous consumption of NAPL components, but this limitation can be overcome by interface fertilization.
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Affiliation(s)
- M C Tejeda-Agredano
- Instituto de Recursos Naturales y Agrobiología, Consejo Superior de Investigaciones Científicas, Avenida Reina Mercedes, 10, 41012 Sevilla, Spain
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A non-invasive fluorescent staining procedure allows Confocal Laser Scanning Microscopy based imaging of Mycobacterium in multispecies biofilms colonizing and degrading polycyclic aromatic hydrocarbons. J Microbiol Methods 2010; 83:317-25. [DOI: 10.1016/j.mimet.2010.09.014] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2010] [Revised: 09/12/2010] [Accepted: 09/13/2010] [Indexed: 01/20/2023]
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Abbasnezhad H, Foght JM, Gray MR. Adhesion to the hydrocarbon phase increases phenanthrene degradation by Pseudomonas fluorescens LP6a. Biodegradation 2010; 22:485-96. [DOI: 10.1007/s10532-010-9421-5] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2010] [Accepted: 09/16/2010] [Indexed: 11/29/2022]
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Influence of low oxygen tensions and sorption to sediment black carbon on biodegradation of pyrene. Appl Environ Microbiol 2010; 76:4430-7. [PMID: 20472733 DOI: 10.1128/aem.00461-10] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Sorption to sediment black carbon (BC) may limit the aerobic biodegradation of polycyclic aromatic hydrocarbons (PAHs) in resuspension events and intact sediment beds. We examined this hypothesis experimentally under conditions that were realistic in terms of oxygen concentrations and BC content. A new method, based on synchronous fluorescence observations of (14)C-pyrene, was developed for continuously measuring the uptake of dissolved pyrene by Mycobacterium gilvum VM552, a representative degrader of PAHs. The effect of oxygen and pyrene concentrations on pyrene uptake followed Michaelis-Menten kinetics, resulting in a dissolved oxygen half-saturation constant (K(om)) of 14.1 microM and a dissolved pyrene half-saturation constant (K(pm)) of 6 nM. The fluorescence of (14)C-pyrene in air-saturated suspensions of sediments and induced cells followed time courses that reflected simultaneous desorption and biodegradation of pyrene, ultimately causing a quasi-steady-state concentration of dissolved pyrene balancing desorptive inputs and biodegradation removals. The increasing concentrations of (14)CO(2) in these suspensions, as determined with liquid scintillation, evidenced the strong impact of sorption to BC-rich sediments on the biodegradation rate. Using the best-fit parameter values, we integrated oxygen and sorption effects and showed that oxygen tensions far below saturation levels in water are sufficient to enable significant decreases in the steady-state concentrations of aqueous-phase pyrene. These findings may be relevant for bioaccumulation scenarios that consider the effect of sediment resuspension events on exposure to water column and sediment pore water, as well as the direct uptake of PAHs from sediments.
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Owsianiak M, Szulc A, Chrzanowski Ł, Cyplik P, Bogacki M, Olejnik-Schmidt AK, Heipieper HJ. Biodegradation and surfactant-mediated biodegradation of diesel fuel by 218 microbial consortia are not correlated to cell surface hydrophobicity. Appl Microbiol Biotechnol 2009; 84:545-53. [DOI: 10.1007/s00253-009-2040-6] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2009] [Revised: 05/09/2009] [Accepted: 05/10/2009] [Indexed: 10/20/2022]
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Biodegradation of 2-ethylhexyl nitrate by Mycobacterium austroafricanum IFP 2173. Appl Environ Microbiol 2008; 74:6187-93. [PMID: 18723659 DOI: 10.1128/aem.01142-08] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
2-Ethyhexyl nitrate (2-EHN) is a major additive of fuel that is used to increase the cetane number of diesel. Because of its wide use and possible accidental release, 2-EHN is a potential pollutant of the environment. In this study, Mycobacterium austroafricanum IFP 2173 was selected from among several strains as the best 2-EHN degrader. The 2-EHN biodegradation rate was increased in biphasic cultures where the hydrocarbon was dissolved in an inert non-aqueous-phase liquid, suggesting that the transfer of the hydrophobic substrate to the cells was a growth-limiting factor. Carbon balance calculation, as well as organic-carbon measurement, indicated a release of metabolites in the culture medium. Further analysis by gas chromatography revealed that a single metabolite accumulated during growth. This metabolite had a molecular mass of 114 Da as determined by gas chromatography/mass spectrometry and was provisionally identified as 4-ethyldihydrofuran-2(3H)-one by liquid chromatography-tandem mass spectrometry analysis. Identification was confirmed by analysis of the chemically synthesized lactone. Based on these results, a plausible catabolic pathway is proposed whereby 2-EHN is converted to 4-ethyldihydrofuran-2(3H)-one, which cannot be metabolized further by strain IFP 2173. This putative pathway provides an explanation for the low energetic efficiency of 2-EHN degradation and its poor biodegradability.
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Peng RH, Xiong AS, Xue Y, Fu XY, Gao F, Zhao W, Tian YS, Yao QH. Microbial biodegradation of polyaromatic hydrocarbons. FEMS Microbiol Rev 2008; 32:927-55. [PMID: 18662317 DOI: 10.1111/j.1574-6976.2008.00127.x] [Citation(s) in RCA: 393] [Impact Index Per Article: 24.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are widespread in various ecosystems and are pollutants of great concern due to their potential toxicity, mutagenicity and carcinogenicity. Because of their hydrophobic nature, most PAHs bind to particulates in soil and sediments, rendering them less available for biological uptake. Microbial degradation represents the major mechanism responsible for the ecological recovery of PAH-contaminated sites. The goal of this review is to provide an outline of the current knowledge of microbial PAH catabolism. In the past decade, the genetic regulation of the pathway involved in naphthalene degradation by different gram-negative and gram-positive bacteria was studied in great detail. Based on both genomic and proteomic data, a deeper understanding of some high-molecular-weight PAH degradation pathways in bacteria was provided. The ability of nonligninolytic and ligninolytic fungi to transform or metabolize PAH pollutants has received considerable attention, and the biochemical principles underlying the degradation of PAHs were examined. In addition, this review summarizes the information known about the biochemical processes that determine the fate of the individual components of PAH mixtures in polluted ecosystems. A deeper understanding of the microorganism-mediated mechanisms of catalysis of PAHs will facilitate the development of new methods to enhance the bioremediation of PAH-contaminated sites.
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Affiliation(s)
- Ri-He Peng
- Shanghai Key Laboratory of Agricultural Genetics and Breeding, Agro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, China
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Abbasnezhad H, Gray MR, Foght JM. Two different mechanisms for adhesion of Gram-negative bacterium, Pseudomonas fluorescens LP6a, to an oil–water interface. Colloids Surf B Biointerfaces 2008; 62:36-41. [DOI: 10.1016/j.colsurfb.2007.09.023] [Citation(s) in RCA: 57] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2007] [Revised: 09/16/2007] [Accepted: 09/16/2007] [Indexed: 11/28/2022]
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Keane A, Lau PCK, Ghoshal S. Use of a whole-cell biosensor to assess the bioavailability enhancement of aromatic hydrocarbon compounds by nonionic surfactants. Biotechnol Bioeng 2008; 99:86-98. [PMID: 17570716 DOI: 10.1002/bit.21524] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
The whole-cell bioluminescent biosensor Pseudomonas putida F1G4 (PpF1G4), which contains a chromosomally-based sep-lux transcriptional fusion, was used as a tool for direct measurement of the bioavailability of hydrophobic organic compounds (HOCs) partitioned into surfactant micelles. The increased bioluminescent response of PpF1G4 in micellar solutions (up to 10 times the critical micellar concentration) of Triton X-100 and Brij 35 indicated higher intracellular concentrations of the test compounds, toluene, naphthalene, and phenanthrene, compared to control systems with no surfactants present. In contrast, Brij 30 caused a decrease in the bioluminescent response to the test compounds in single-solute systems, without adversely affecting cell growth. The decrease in bioluminescent response in the presence of Brij 30 did not occur in the presence of multiple HOCs extracted into the surfactant solutions from crude oil and creosote. The effect of the micellar solutions on the toluene biodegradation rate was consistent with the bioluminescent response in single-solute systems. None of the surfactants were toxic to PpF1G4 at the doses employed in this study, and PpF1G4 did not produce a bioluminescent response to the surfactants nor utilize them as growth substrates. TEM images suggest that the surfactants did not rupture the cell membranes. The results demonstrate that for Pseudomonas putida F1, nonionic surfactants such as Triton X-100 and Brij 35, at doses between 2 and 10 CMC, may increase the bioavailability and direct uptake of micellar phase HOCs that are common pollutants at contaminated sites.
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Affiliation(s)
- Angela Keane
- Department of Civil Engineering, McGill University, Macdonald Engineering Bldg, 817 Sherbrooke Street West, Montreal, Quebec, Canada
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López Z, Vila J, Ortega-Calvo JJ, Grifoll M. Simultaneous biodegradation of creosote-polycyclic aromatic hydrocarbons by a pyrene-degrading Mycobacterium. Appl Microbiol Biotechnol 2007; 78:165-72. [PMID: 18074131 DOI: 10.1007/s00253-007-1284-2] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2007] [Revised: 11/12/2007] [Accepted: 11/13/2007] [Indexed: 11/28/2022]
Abstract
When incubated with a creosote-polycyclic aromatic hydrocarbons (PAHs) mixture, the pyrene-degrading strain Mycobacterium sp. AP1 acted on three- and four-ring components, causing the simultaneous depletion of 25% of the total PAHs in 30 days. The kinetics of disappearance of individual PAHs was consistent with differences in aqueous solubility. During the incubation, a number of acid metabolites indicative of distinctive reactions carried out by high-molecular-weight PAH-degrading mycobacteria accumulated in the medium. Most of these metabolites were dicarboxylic aromatic acids formed as a result of the utilization of growth substrates (phenanthrene, pyrene, or fluoranthene) by multibranched pathways including meta- and ortho-ring-cleavage reactions: phthalic acid, naphthalene-1,8-dicarboxylic acid, phenanthrene-4,5-dicarboxylic acid, diphenic acid, Z-9-carboxymethylenefluorene-1-carboxylic acid, and 6,6'-dihydroxy-2,2'-biphenyl dicarboxylic acid. Others were dead-end products resulting from cometabolic oxidations on nongrowth substrates (fluorene meta-cleavage product). These results contribute to the general knowledge of the biochemical processes that determine the fate of the individual components of PAH mixtures in polluted soils. The identification of the partially oxidized compounds will facilitate to develop analytical methods to determine their potential formation and accumulation in contaminated sites.
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Affiliation(s)
- Zaira López
- Departament de Microbiologia, Universitat de Barcelona, Diagonal 645, 08028, Barcelona, Spain
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Lee S. Enhanced dissolution of TCE in NAPL by TCE-degrading bacteria in wetland soils. JOURNAL OF HAZARDOUS MATERIALS 2007; 145:17-22. [PMID: 17126487 DOI: 10.1016/j.jhazmat.2006.10.073] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2006] [Revised: 10/24/2006] [Accepted: 10/25/2006] [Indexed: 05/12/2023]
Abstract
The influence of trichloroethene (TCE) dechlorinating mixed cultures in dissolution of TCE in nonaqueous phase liquid (NAPL) via biodegradation was observed. Experiments were conducted in batch reactor system with and without marsh soils under 10 and 20 degrees C for 2 months. The dissolution phenomenon in biotic reactors containing mixed cultures was showed temporal increases compared to abiotic reactors treated with biocide. Effective NAPL-water transfer rate (K(m)) calculated in this study showed more than four times higher in biotic reactors than that in abiotic reactors. The results might be attributed to the biologically enhanced dissolution process via dechlorination in reactors. Temperature would be a factor to determine the dissolution rate by controlling bacterial activity. The TCE dechlorination occurred even in an interface of TCE-NAPL that demonstrated no previous TCE biodegradation, suggesting that microbes may be useful in developing source-zone bioremediation system. In conclusion, dechlorinating mixed culture could enhance dissolution in NAPL that may be useful in the application of source zone bioremediation.
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Affiliation(s)
- Sangjin Lee
- Research and Development Center, Korea Coast Guard, 3-8 Bunji, Songdo-Dong, Yunsu-Gu, Incheon 406-130, South Korea.
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Stroud JL, Paton GI, Semple KT. Microbe-aliphatic hydrocarbon interactions in soil: implications for biodegradation and bioremediation. J Appl Microbiol 2007; 102:1239-53. [PMID: 17448159 DOI: 10.1111/j.1365-2672.2007.03401.x] [Citation(s) in RCA: 92] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Aliphatic hydrocarbons make up a substantial portion of organic contamination in the terrestrial environment. However, most studies have focussed on the fate and behaviour of aromatic contaminants in soil. Despite structural differences between aromatic and aliphatic hydrocarbons, both classes of contaminants are subject to physicochemical processes, which can affect the degree of loss, sequestration and interaction with soil microflora. Given the nature of hydrocarbon contamination of soils and the importance of bioremediation strategies, understanding the fate and behaviour of aliphatic hydrocarbons is imperative, particularly microbe-contaminant interactions. Biodegradation by microbes is the key removal process of hydrocarbons in soils, which is controlled by hydrocarbon physicochemistry, environmental conditions, bioavailability and the presence of catabolically active microbes. Therefore, the aims of this review are (i) to consider the physicochemical properties of aliphatic hydrocarbons and highlight mechanisms controlling their fate and behaviour in soil; (ii) to discuss the bioavailability and bioaccessibility of aliphatic hydrocarbons in soil, with particular attention being paid to biodegradation, and (iii) to briefly consider bioremediation techniques that may be applied to remove aliphatic hydrocarbons from soil.
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Affiliation(s)
- J L Stroud
- Department of Environmental Science, Faculty of Science and Technology, Lancaster University, Lancaster, UK
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Tehrani DM, Minooi S, Dehkordi FA, Herfatmane A. The Effect of Triton X-100 on Biodegradation of Aliphatic and Aromatic Fractions of Crude Oil in Soil. ACTA ACUST UNITED AC 2006. [DOI: 10.3923/jas.2006.1756.1761] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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35
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Di Gennaro P, Conforti P, Lasagni M, Bestetti G, Bernasconi S, Orsini F, Sello G. Dioxygenation of naphthalene byPseudomonas fluorescens N3 dioxygenase: Optimization of the process parameters. Biotechnol Bioeng 2006; 93:511-8. [PMID: 16193519 DOI: 10.1002/bit.20736] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
The bioconversion of naphthalene to the 1,2-dihydro-1,2-dihydroxy derivative was performed in good yield using an Escherichia coli recombinant strain carrying Pseudomonas fluorescens N3 dioxygenase. However, the efficiency of such transformation is affected by many process parameters, and their optimization is essential to the scaling up of the process. The following process parameters were considered for optimization: cell concentration together with the corresponding glucose concentration (DCW/L); pH of medium; temperature; stirring speed; air flow; substrate concentration; Fe(2+) concentration; microelements concentration; reaction volume. We used a two-step multivariate experimental design to select important variables and assign them optimal values. The most significant parameters were selected by adopting a Plackett-Burman design, and were then correlated, using a full factorial design, with the experimental results. The experimental results illustrate that the optimized process of recombinant whole cell biotransformation in two-liquid phase systems enhances the naphthalene dihydrodiol yield threefold. This biotransformation opens the way to future experiments involving different substrates.
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Affiliation(s)
- P Di Gennaro
- Department of Environmental Sciences, University of Milano-Bicocca, Italy
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Sello G, Bernasconi S, Orsini F, Tansi M, Galli E, Di Gennaro P, Bestetti G. Organic phase effect in the biphasic bioconversion of substituted naphthalenes by engineered E. coli containing P. fluorescens N3 dioxygenase. ACTA ACUST UNITED AC 2004. [DOI: 10.1016/j.molcatb.2003.10.013] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Bernasconi S, Orsini F, Sello G, Di Gennaro P. Bacterial monooxygenase mediated preparation of nonracemic chiral oxiranes: study of the effects of substituent nature and position. ACTA ACUST UNITED AC 2004. [DOI: 10.1016/j.tetasy.2004.04.005] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Abstract
Bacterial chemotaxis has the potential to increase the rate of degradation of chemoattractants, but its influence on degradation of hydrophobic attractants initially dissolved in a non-aqueous-phase liquid (NAPL) has not been examined. We studied the effect of chemotaxis by Pseudomonas putida G7 on naphthalene mass transfer and degradation in a system in which the naphthalene was dissolved in a model NAPL. Chemotaxis by wild-type P. putida G7 increased the rates of naphthalene desorption and degradation relative to rates observed with nonchemotactic and nonmotile mutant strains. While biodegradation alone influenced the rate of substrate desorption by increasing the concentration gradient against which desorption occurred, chemotaxis created an even steeper gradient as the cells accumulated near the NAPL source. The extent to which chemotaxis affected naphthalene desorption and degradation depended on the initial bacterial and naphthalene concentrations, reflecting the influences of these variables on concentration gradients and on the relative rates of mass transfer and biodegradation. The results of this study suggest that chemotaxis can substantially increase the rates of mass transfer and degradation of NAPL-associated hydrophobic pollutants.
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Affiliation(s)
- Aaron M J Law
- Department of Environmental Sciences and Engineering, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
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39
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Lee PH, Doick KJ, Semple KT. The development of phenanthrene catabolism in soil amended with transformer oil. FEMS Microbiol Lett 2003; 228:217-23. [PMID: 14638427 DOI: 10.1016/s0378-1097(03)00751-1] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous environmental contaminants frequently associated with light non-aqueous-phase liquids (LNAPLs) in soil. Microbial degradation comprises a major loss process for PAHs in the environment. Various laboratory studies, using known degraders, have shown reduced or enhanced mineralisation of PAHs when dissolved in different LNAPLs. Effects due to the presence of LNAPLs on indigenous micro-organisms, however, are not fully understood. A pristine pasture soil was spiked with [14C]phenanthrene and transformer oil to 0, 0.01 and 0.1%, and incubated for 180 days. The catabolic potential of the soil towards phenanthrene was assessed periodically during ageing. The extent of the lag phase (prior to >5% mineralisation), maximum rates and overall extents of mineralisation observed during the course of a 14-day bioassay appeared to be dependent upon phenanthrene concentration, the presence of transformer oil, and soil-contaminant contact time. Putatively, transformer oil enhanced acclimation and facilitated the development of measurable catabolic activity towards phenanthrene in a previously uncontaminated pasture soil. Exact mechanisms for the observed enhancement, longer-term fate/degradation of the oil and residual phenanthrene, and effects of the presence of the oil on the indigenous microbes over extended time frames warrant further investigation.
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Affiliation(s)
- Philip H Lee
- Department of Environmental Science, Institute of Environmental and Natural Sciences, Lancaster University, Lancaster LA1 4YQ, UK
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Fernandes P, Prazeres DMF, Cabral JMS. Membrane-assisted extractive bioconversions. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2003; 80:115-48. [PMID: 12747543 DOI: 10.1007/3-540-36782-9_4] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
This chapter summarizes the use of membrane reactors in extractive bioconversions as process integration systems leading to in situ product recovery. Several membrane reactor configurations are analyzed, taking into account the type of bioconversion, biocatalyst type and location (either in the aqueous phase or in the membrane), membrane chemistry and morphology, solvent (extractant) type and its biocompatibility. Modeling of liquid-liquid extractive membrane bioreactors operation is also analyzed considering kinetics and mass-transfer aspects. The chapter includes examples from the authors' laboratory as well as other published in the field. Both enzyme and whole cell-based bioconversions are considered. Relevant aspects related to the solvent (extractant) toxicity and how the membrane could protect the biocatalytic activity are analyzed. Trends in this field are also given.
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Affiliation(s)
- Pedro Fernandes
- Center for Biological and Chemical Engineering, Instituto Superior Técnico, Av. Rovisco Pais,1049-001 Lisboa, Portugal
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41
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Doick KJ, Semple KT. The effect of soil: water ratios on the mineralisation of phenanthrene: LNAPL mixtures in soil. FEMS Microbiol Lett 2003; 220:29-33. [PMID: 12644224 DOI: 10.1016/s0378-1097(03)00056-9] [Citation(s) in RCA: 57] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
Abstract
Contamination of soil by polycyclic aromatic hydrocarbons is frequently associated with non-aqueous-phase liquids. Measurement of the catabolic potential of a soil or determination of the biodegradable fraction of a contaminant can be done using a slurried soil respirometric system. This work assessed the impact of increasing the concentration of transformer oil and soil:water ratio on the microbial catabolism of [(14)C]phenanthrene to (14)CO(2) by a phenanthrene-degrading inoculum. Slurrying (1:1, 1:2, 1:3 and 1:5 soil:water ratios) consistently resulted in statistically higher rates and extents of mineralisation than the non-slurried system (2:1 soil:water ratio; P<0.01). The maximum extents of mineralisation observed occurred in the 1:2-1:5 soil:water ratio microcosms irrespective of transformer oil concentration. Transformer oil concentrations investigated displayed no statistically significant effect on total mineralisation (P>0.05). Soil slurries 1:2 or greater, but less than 1:5 (soil:water), are recommended for bioassay determinations of total contaminant bioavailability due to greater overall mineralisation and improved reproducibility.
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Affiliation(s)
- Kieron J Doick
- Department of Environmental Science, Institute of Environmental and Natural Science, Lancaster University, Lancaster LA1 4YQ, UK
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42
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Gauthier E, Déziel E, Villemur R, Juteau P, Lépine F, Beaudet R. Initial characterization of new bacteria degrading high-molecular weight polycyclic aromatic hydrocarbons isolated from a 2-year enrichment in a two-liquid-phase culture system. J Appl Microbiol 2003; 94:301-11. [PMID: 12534823 DOI: 10.1046/j.1365-2672.2003.01835.x] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
AIMS To characterize some polycyclic aromatic hydrocarbons (PAH)-degrading microorganisms isolated from an enriched consortium degrading high molecular weight (HMW) PAHs in a two-liquid-phase (TLP) soil slurry bioreactor, and to determine the effect of low molecular weight (LMW) PAH on their growth and HMW PAH-degrading activity. METHODS AND RESULTS Several microorganisms were isolated from a HMW-PAH (pyrene, chrysene, benzo[a]pyrene and perylene) degrading consortium enriched in TLP cultures using silicone oil as the organic phase. From 16S rRNA analysis, four isolates were identified as Mycobacterium gilvum B1 (99% identity),Bacillus pumilus B44 (99% identity), Microbacterium esteraromaticum B21 (98% identity), and to the genus Porphyrobacter B51 (96% identity). The two latter isolates have not previously been associated with PAH degradation. Isolate B51 grew strongly in the interfacial fraction in the presence of naphthalene vapours and phenanthrene compared with cultures without LMW PAHs. Benzo[a]pyrene was degraded in cultures containing a HMW PAH mixture but pyrene had no effect on its degradation. The growth of isolates B1 and B21 was improved in the aqueous phase than in the interfacial fraction for cultures with naphthalene vapours. Pyrene was required for benzo[a]pyrene degradation by isolate B1. For isolate B21, pyrene and chrysene were degraded only in cultures without naphthalene vapours. CONCLUSION Consortium enriched in a TLP culture is composed of microorganisms with different abilities to grow at the interface or in the aqueous phase according to the culture conditions and the PAH that are present. Naphthalene vapours increased the growth of the microorganisms in TLP cultures but did not stimulate the HMW PAH degradation. SIGNIFICANCE AND IMPACT OF THE STUDY New HMW PAH-degrading microorganisms and a better understanding of the mechanisms involved in HMW PAH degradation in TLP cultures.
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Affiliation(s)
- E Gauthier
- INRS-Institut Armand-Frappier, Université du Québec, Québec, Canada
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43
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Carlstrom CJ, Tuovinen OH. Mineralization of phenanthrene and fluoranthene in yardwaste compost. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2003; 124:81-91. [PMID: 12683985 DOI: 10.1016/s0269-7491(02)00410-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
The purpose of the study was to evaluate the potential of phenanthrene and fluoranthene biodegradation in yardwaste compost materials. These polynuclear aromatic hydrocarbons were chosen for this work because they are relatively readily biodegradable and ubiquitous in the environment. Compost samples were incubated in biometers with 14C-labeled phenanthrene and the evolution of "4CO2 was assessed as a measure of mineralization. The '4CO2 evolution varied widely among replicate biometers, possibly as the result of (1) uneven and patchy colonization of phenanthrene-degrading microorganisms on compost particles, and (2) non-uniform dispersion of the labeled substrate spike into the yardwaste microenvironment. Mineralization of phenanthrene reached about 40%extent of 14CO2 evolution at best before leveling off, but the maximum varied from sample to sample and could be as low as 1%after three months. Active mineralization occurred at mesophilic and thermophilic temperatures. Methanol extraction was used to recover "4C from biometer samples that were spiked with "4C-labeled phenanthrene. Extraction for 24-48 h yielded 1-14% recovery of 14C, depending on the length of the preceding incubation. The low extraction yield and relatively low maximum mineralization(<40%) indicated that residual phenanthrene was sorbed and bound within the compost matrix in the biometer. Amendment ofbiometers with 0.05% Tween 80 or addition of water did not consistently enhance the mineralization. Variability in mineralization was greatly reduced in liquid samples taken from pre-enriched compost samples. Mineralization of 14C-labeled fluoranthene was negligible in biometers but could be stimulated by pre-enrichment with salicylate or naphthalene. Pre-enrichment also accelerated the mineralization of phenanthrene.
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Affiliation(s)
- Carolyn J Carlstrom
- Department of Microbiology, The Ohio State University, 484 West 12th Avenue, Columbus, OH 43210-1292, USA
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Seagren EA, Rittmann BE, Valocchi AJ. Bioenhancement of NAPL pool dissolution: experimental evaluation. JOURNAL OF CONTAMINANT HYDROLOGY 2002; 55:57-85. [PMID: 12000093 DOI: 10.1016/s0169-7722(01)00186-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Experiments were conducted to quantify nonaqueous phase liquid (NAPL) pool dissolution and its enhancement by in situ biodegradation. The experiments were performed using square cross-section, glass-bead packed column reactors with a small pool of a toluene-in-dodecane mixture (toluene mole fraction, X(tol) approximately 0.02 or 0.09). Experimental quasi-steady-state toluene dissolution fluxes were determined using a 14C-carbon mass-balance approach during water flushing with and without biodegradation. The experiments demonstrated a statistically significant bioenhancement of the toluene dissolution flux of up to roughly twofold at average pore water velocities of approximately 0.1 and 1 m/day when the toluene mole fraction was low ( approximately 0.02); however, little or no bioenhancement was observed with the higher mole fraction ( approximately 0.09). Although it cannot be determined conclusively, the weight of evidence based on biomass measurements and model analyses suggests that the reduced bioenhancement for the high mole fraction was due to higher dissolved toluene concentrations, which may have caused toxicity effects. Importantly, even though NAPL dissolution was not bioenhanced in every case, the biodegradation reduced toluene concentrations to low levels in the reactor effluents.
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Affiliation(s)
- Eric A Seagren
- Department of Civil and Environmental Engineering, University of Maryland, College Park 20742, USA.
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46
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Li Y, Yediler A, Ou Z, Conrad I, Kettrup A. Effects of a non-ionic surfactant (Tween-80) on the mineralization, metabolism and uptake of phenanthrene in wheat-solution-lava microcosm. CHEMOSPHERE 2001; 45:67-75. [PMID: 11572593 DOI: 10.1016/s0045-6535(00)00605-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Effects of a non-ionic surfactant (Tween-80) on the mineralization, metabolism and uptake of phenanthrene in wheat-solution-lava microcosm were studied using 14C-labeled phenanthrene. The mineralization and metabolism of phenanthrene were fast in such a system. At least 90% of the applied phenanthrene were transformed within 24 days. Only 0.3% of the applied 14C-activity were identified to be the parent phenanthrene. Most of the applied 14C-activity (70%) was recovered from wheat, in which ca. 70% were associated with wheat shoots (stems and leaves) and ca. 30% wheat roots. 33% and 20% of the applied 14C-activity had been constructed into wheat tissues of shoots and roots, respectively. The 14C-activity recovered in forms of CO2 and volatile organic chemicals (VOCs) was 12-16% and 4-5%, respectively. The major metabolites of phenanthrene were polar compounds (18% of the applied 14C) and only 2.1% were identified as non-polar metabolites. No phenanthrene was found in wheat shoots indicating that it could not be transported from roots to upper parts of the plant but in form of metabolites (mostly polar metabolites). Foliar uptake of 14C-activity via air in form of 14CO2 occurred. The presence of Tween-80 significantly enhanced the degradation of phenanthrene, which could be attributed to its increase of microbial activities in the system. Tween-80 also significantly (P < 0.05) reduced the phenanthrene level in wheat roots, which probably resulted from desorption of phenanthrene from root surface caused by the surfactant.
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Affiliation(s)
- Y Li
- Institute of Applied Ecology, Academia Sinica, Shenyang, People's Republic of China
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47
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García-Junco M, De Olmedo E, Ortega-Calvo JJ. Bioavailability of solid and non-aqueous phase liquid (NAPL)-dissolved phenanthrene to the biosurfactant-producing bacterium Pseudomonas aeruginosa 19SJ. Environ Microbiol 2001; 3:561-9. [PMID: 11683866 DOI: 10.1046/j.1462-2920.2001.00223.x] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
The biodegradation of phenanthrene by the biosurfactant-producing strain Pseudomonas aeruginosa 19SJ was investigated in experiments with the compound present either as crystals or dissolved in non-aqueous phase liquids (NAPLs). Growth on solid phenanthrene exhibited an initial phase not limited by dissolution rate and a subsequent, carbon-limited phase caused by exhaustion of the carbon source. Rhamnolipid biosurfactants were produced from solid phenanthrene and appeared in solution and particulate material (cells and phenanthrene crystals). During the carbon-limited phase, the concentration of rhamnolipids detected in culture exceeded the critical micelle concentration (CMC) determined with purified rhamnolipids. The biosurfactants caused a significant increase in dissolution rate and pseudosolubility of phenanthrene, but only at concentrations above the CMC. Externally added rhamnolipids at a concentration higher than the CMC increased the biodegradation rate of solid phenanthrene. Mineralization curves of low concentrations of phenanthrene initially dissolved in two NAPLs [2,2,4,4,6,8,8-heptamethylnonane and di(2-ethylhexyl)phthalate] were S-shaped, although no growth was observed in the population of suspended bacteria. Biosurfactants were not detected in solution under these conditions. The observed mineralization was attributed not only to suspended bacteria, but also to bacterial populations growing at the NAPL-water interface, mineralizing the compound at higher rates than predicted by abiotic partitioning. We suggest that rhamnolipid production and attachment increased the bioavailability of phenanthrene, so promoting biodegradation activity.
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Affiliation(s)
- M García-Junco
- Instituto de Recursos Naturales y Agrobiología, CSIC, Apartado 1052, E-41080 Seville, Spain
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48
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Dean SM, Jin Y, Cha DK, Wilson SV, Radosevich M. Phenanthrene degradation in soils co-inoculated with phenanthrene-degrading and biosurfactant-producing bacteria. JOURNAL OF ENVIRONMENTAL QUALITY 2001; 30:1126-1133. [PMID: 11476488 DOI: 10.2134/jeq2001.3041126x] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Contaminant sorption within the soil matrix frequently limits biodegradation. However, contaminant bioavailability can be species-specific. This study investigated bioavailability of phenanthrene (PHE) to two PHE-degrading bacteria (Pseudomonas strain R and isolate P5-2) in the presence of rhamnolipid biosurfactant and/or a biosurfactant-producing bacterium, Pseudomonas aeruginosa ATCC 9027. Pseudomonas strain R mineralized more soil-sorbed PHE than strain P5-2, but in aqueous cultures the rate and extent of PHE mineralization by P5-2 exceeded that by P. strain R. In Fallsington sandy loam (fine-loamy, mixed, active, mesic Typic Endoaquult) (high PHE-sorption capacity) the addition of rhamnolipid increased PHE mineralization by P. strain R. Phenanthrene mineralization in soils inoculated with P5-2 was minimal and no enhancement in PHE degradation was observed when biosurfactant was added. Co-inoculation of Fallsington sandy loam with the biosurfactant producer did not affect PHE mineralization by isolate P5-2, but significantly enhanced PHE mineralization by P. strain R. The enhancement of PHE mineralization could not be explained by P. aeruginosa-mediated PHE degradation. The addition of rhamnolipid at concentrations above the critical micelle concentration (CMC) resulted in enhanced PHE release from test soils. These results suggest that the PHE-degrading strains were able to access different pools of PHE and that the biosurfactant-enhanced release of PHE from soils did not result in enhanced biodegradation. The results also demonstrated that bacteria with the catabolic potential to degrade sorbed hydrophobic contaminants could interact commensally with surfactant-producing strains by an unknown mechanism to hasten the biodegradation of aromatic hydrocarbons. Thus, understanding interactions among microbes may provide opportunities to further enhance biodegradation of soil-bound organic contaminants.
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Affiliation(s)
- S M Dean
- Dep of Plant and Soil Sciences, Univ of Delaware, Newark 19717, USA
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Riis V, Brandt M, Miethe D, Babel W. Influence of special surfactants on the microbial degradation of mineral oils. CHEMOSPHERE 2000; 41:1001-1006. [PMID: 10879817 DOI: 10.1016/s0045-6535(99)00484-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Various surfactants belonging to the group of fatty acid-acylated amino acids were tested for their ability to accelerate the microbial degradation of mineral oil. Of the lauric acid-acylated amino acids, aliphatic acids and histidine were found to be the most suitable. By the aid of these compounds additional 20-60% of a residual oil fraction could be degraded. The longer the chain of the fatty acid moiety, the more effective the surfactants are. Natural L-amino acids were more effective than their D-configuration. Since the special surfactants are easily biologically degradable, multiple replenishment is required in long-term experiments. The faster, more complete degradation of mineral oil is caused solely by interfacial activity; the growth of biomass due to the function of surfactants as substrate had no effect.
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Affiliation(s)
- V Riis
- Department of Environmental Microbiology, UFZ Centre for Environmental Research Leipzig-Halle, Germany
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50
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Marcoux J, Déziel E, Villemur R, Lépine F, Bisaillon JG, Beaudet R. Optimization of high-molecular-weight polycyclic aromatic hydrocarbons' degradation in a two-liquid-phase bioreactor. J Appl Microbiol 2000; 88:655-62. [PMID: 10792524 DOI: 10.1046/j.1365-2672.2000.01011.x] [Citation(s) in RCA: 75] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
A microbial consortium degrading the high-molecular-weight polycyclic aromatic hydrocarbons (HMW PAHs) pyrene, chrysene, benzo[a]pyrene and perylene in a two-liquid-phase reactor was studied. The highest PAH-degrading activity was observed with silicone oil as the water-immiscible phase; 2,2,4,4,6,8, 8-heptamethylnonane, paraffin oil, hexadecane and corn oil were much less, or not efficient in improving PAH degradation by the consortium. Addition of surfactants (Triton X-100, Witconol SN70, Brij 35 and rhamnolipids) or Inipol EAP22 did not promote PAH biodegradation. Rhamnolipids had an inhibitory effect. Addition of salicylate, benzoate, 1-hydroxy-2-naphtoic acid or catechol did not increase the PAH-degrading activity of the consortium, but the addition of low-molecular-weight (LMW) PAHs such as naphthalene and phenanthrene did. In these conditions, the degradation rates were 27 mg l-1 d-1 for pyrene, 8.9 mg l-1 d-1 for chrysene, 1.8 mg l-1 d-1 for benzo[a]pyrene and 0.37 mg l-1 d-1 for perylene. Micro-organisms from the interface were slightly more effective in degrading PAHs than those from the aqueous phase.
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Affiliation(s)
- J Marcoux
- Centre de microbiologie et biotechnologie, INRS-Institut Armand-Frappier, Université du Québec, Canada
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