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Aruna P, Patil SS, Muthu MS, Vettriselvi V, Arockiam S, Kirubakaran R, Sivakumar N. Association between polymorphisms of immune response genes and early childhood caries - systematic review, gene-based, gene cluster, and meta-analysis. J Genet Eng Biotechnol 2023; 21:124. [PMID: 37971556 PMCID: PMC10654314 DOI: 10.1186/s43141-023-00566-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 10/26/2023] [Indexed: 11/19/2023]
Abstract
BACKGROUND Early childhood caries is a significant public health concern affecting about 600 million children globally. The etiology of early childhood caries can be explained as an interplay between genetic and environmental factors. Single nucleotide polymorphisms are the most common variations in the human genome. Genetic variations of immune response genes can modify the defense response of the host, and alter the susceptibility to bacterial colonization of the oral cavity and early childhood caries. The aim of this systematic review is to identify genetic variants of immune response genes associated with early childhood caries. RESULTS A total of 7124 articles were identified by conducting an elaborate search across various electronic databases and genome-wide association studies databases. Subsequent to exclusion at various stages, fifteen articles qualified to be included into the present review. Risk of bias assessment was done with the Q-genie tool. Quantitative synthesis revealed that the odds ratio for TT and CC genotypes of rs11362 was 1.07 (0.67-1.71) and 1.16 (0.84-1.60), respectively. Gene-based analysis revealed a statistically significant association between variants of tumor necrosis factor-alpha gene and T-cell receptor alpha variable 4 locus with early childhood caries. Gene clustering showed the presence of three functional clusters. To comprehend the protein-protein interaction, the bioinformatic tool of "Search Tools for the Retrieval of Interacting Genes and Proteins" was used. Among the biological processes and the reactome pathways, complement activation through the lectin pathway showed the highest strength of association with early childhood caries. To understand the interaction and functionality of the genes, "gene function prediction using Multiple Association Network Integration Algorithm" was used, which revealed that the genes were linked by physical interaction (39.34%) and through co-expression (34.88%). CONCLUSIONS Genotype TT of rs7217186 of arachidonate 15-lipoxygenase gene was a risk factor for early childhood caries. Multiple genetic variants of T-cell receptor alpha variable 4 locus and tumor necrosis factor-alpha gene were associated with increased susceptibility to early childhood caries. Polymorphisms of genes regulating the lectin pathway of complement activation can modify the susceptibility to early childhood caries.
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Affiliation(s)
- P Aruna
- Centre for Early Childhood Caries Research, Department of Pediatric and Preventive Dentistry, Sri Ramachandra Institute of Higher Education and Research, Chennai, India
- Department of Pediatric and Preventive Dentistry, Indira Gandhi Institute of Dental Sciences, Sri Balaji Vidyapeeth, Pondicherry, India
| | - Sneha S Patil
- Department of Environmental Health Engineering, Faculty of Public Health, Sri Ramachandra Institute of Higher Education and Research, Chennai, India
- Department of Pediatric and Preventive Dentistry, Dr. D.Y. Patil Dental College and Hospital, Dr. D.Y. Patil Vidyapeeth, Sant-Tukaram Nagar, Pimpri, Pune, India
| | - M S Muthu
- Centre for Early Childhood Caries Research, Department of Pediatric and Preventive Dentistry, Sri Ramachandra Institute of Higher Education and Research, Chennai, India.
- Centre of Medical and Bio-Allied Health Sciences Research, Ajman University, Ajman, United Arab Emirates.
| | - V Vettriselvi
- Department of Human Genetics, Sri Ramachandra Institute of Higher Education and Research, Chennai, India
| | - Selva Arockiam
- Department of Orthodontics, Meenakshi Ammal Dental College and Hospital, Chennai, India
| | - R Kirubakaran
- South Asian Cochrane Network and Centre. Christian Medical College, Vellore, India
| | - N Sivakumar
- Department of Pediatric and Preventive Dentistry, Narayana Dental College and Hospital, Nellore, India
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2
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Yang JC, Lee J, Lim SJ, Kwak G, Park J. Molecularly Imprinted Chalcone-Branched Polyimide-Based Chemosensors with Stripe Nanopatterns for the Detection of Melittin. ACS Sens 2023; 8:2298-2308. [PMID: 37261931 DOI: 10.1021/acssensors.3c00341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
In this study, a chalcone-branched polyimide (CB-PI) was synthesized by the Steglich esterification reaction for selective recognition of the toxic peptide melittin (MEL). MEL was immobilized on a nanopatterned poly(dimethylsiloxane) (PDMS) mold using a conventional surface modification technique to increase binding sites. A stripe-nanopatterned thin CB-PI film was formed on a quartz crystal (QC) substrate by simultaneously performing microcontact printing and ultraviolet (UV) light dimerization using a MEL-immobilized mold. The surface morphology changes and dimensions of the molecularly imprinted polymer (MIP) films with stripe nanopatterns (S-MIP) were analyzed using scanning electron microscopy (SEM) and atomic force microscopy (AFM). The sensing signals (Δf and Qe) of the S-MIP sensor were investigated upon adsorption in a 100-μL dilute plasma solution containing 30 μg/mL MEL, and its reproducibility, reuse, stability, and durability were investigated. The S-MIP sensor showed high sensitivity (5.49 mL/mg) and coefficient of determination (R2 = 0.999), and the detection limit (LOD) and the quantification limit (LOQ) were determined as 0.3 and 1.1 μg/mL, respectively. In addition, the selectivity coefficients (k*) calculated from the selectivity tests were 2.7-5.7, 2.1-4.3, and 2.8-4.6 for bovine serum albumin (BSA), immunoglobulin G (IgG), and apamin (APA), respectively. Our results indicate that the nanopatterned MIP sensors based on CB-PI demonstrate great potential as a sensing tool for the quantitative analysis of biomolecules.
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Affiliation(s)
- Jin Chul Yang
- Department of Polymer Science & Engineering, Kyungpook National University, 80 Daehak-ro, Daegu 41566, Republic of Korea
| | - Jineun Lee
- Department of Polymer Science & Engineering, Kyungpook National University, 80 Daehak-ro, Daegu 41566, Republic of Korea
| | - Seok Jin Lim
- Department of Polymer Science & Engineering, Kyungpook National University, 80 Daehak-ro, Daegu 41566, Republic of Korea
| | - Giseop Kwak
- Department of Polymer Science & Engineering, Kyungpook National University, 80 Daehak-ro, Daegu 41566, Republic of Korea
| | - Jinyoung Park
- Department of Polymer Science & Engineering, Kyungpook National University, 80 Daehak-ro, Daegu 41566, Republic of Korea
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Genetic Aspects of Dental Erosive Wear and Dental Caries. Int J Dent 2021; 2021:5566733. [PMID: 34335772 PMCID: PMC8292068 DOI: 10.1155/2021/5566733] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2021] [Accepted: 07/01/2021] [Indexed: 11/17/2022] Open
Abstract
Objectives The present review aims to give an overview of the literature focusing on novel genetic aspects of dental erosion and dental caries. Once the tooth erupts into the oral cavity, the regenerative capability of enamel is fundamentally limited due to the loss of dental epithelium during eruption. The susceptibility or resistance to dental erosion and caries is presumably a result of environmental, phenotypic, and/or genetic influence. Even though it is evident that individuals frequently exposing their teeth to acid and sugar are at high risk of developing dental erosion and caries, the findings exclusively based on these factors are elusive. Data resources and study selection. The present review was based on data collected from the National Library of Medicine database with different combinations of the following terms: "tooth," "dental," "dentin," "enamel," "erosion," "erosive wear," "caries," "decay," "gene," and "genetic." A total of forty-six studies met the inclusion criteria. Data were extracted by one reviewer and verified by another. Conclusion The high prevalence of erosion and caries among certain groups, and observations that not all individuals appearing to be at risk develop these lesions, has sparked research on identifying genetic effects to these conditions. A connection of genome-wide and candidate gene studies has increased considerably in the literature. This review reveals largely varying success among studies, demonstrating the difficulties of developing the study with adequate sample sizes and durable phenotype definitions that permit enough statistical power to identify genetic contributors.
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Krupińska AM, Bogucki Z. Clinical aspects of the use of lactoferrin in dentistry. J Oral Biosci 2021; 63:129-133. [PMID: 33662566 DOI: 10.1016/j.job.2021.02.005] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2020] [Revised: 02/16/2021] [Accepted: 02/19/2021] [Indexed: 12/30/2022]
Abstract
BACKGROUND Lactoferrin (Lf) is a natural iron-binding protein involved in coordinating specific and non-specific immune responses in humans. It exhibits broad spectrum antimicrobial properties against bacteria, viruses, and fungi. Owing to its high affinity for ferric (Fe+++) ions, Lf is responsible for controlling the oxidative stress in the body, and thus protects cells from oxygen injury. In addition, Lf is a natural immunomodulatory molecule that regulates the activity of the immune system. HIGHLIGHT Lactoferrin present in saliva plays an important role in maintaining oral hygiene. It exhibits protective function on mucosal surfaces, which constitute a barrier between the host and the external environment. Thus, Lf may be considered as the first line of defense protein that is associated with oral mucosal immunity. CONCLUSION Many studies indicate that lactoferrin supplementation is safe and beneficial for human health. The aim of this review is to discuss the effects of Lf on oral microflora, highlighting the potential significance of this protein in dental therapy and prevention of oral diseases.
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Affiliation(s)
- Anna M Krupińska
- Department and Division of Dental Prosthetics, Wroclaw Medical University, Wyb. Ludwika Pasteura 1, 50-367 Wrocław, Poland.
| | - Zdzisław Bogucki
- Department and Division of Dental Prosthetics, Wroclaw Medical University, Wyb. Ludwika Pasteura 1, 50-367 Wrocław, Poland
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Wu L, Li Z, Zhou J, Ma B, Yu F, Zheng X, Hu X, Ma Z, Su X. An association analysis for genetic factors for dental caries susceptibility in a cohort of Chinese children. Oral Dis 2020; 28:480-494. [DOI: 10.1111/odi.13758] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Revised: 11/17/2020] [Accepted: 12/14/2020] [Indexed: 11/29/2022]
Affiliation(s)
- Lingli Wu
- Department of Dentistry Key Laboratory of Oral Diseases of Gansu Province Key Laboratory of Stomatology of State Ethnic Affairs Commission Northwest Minzu University Lanzhou China
| | - Zhiqiang Li
- Department of Dentistry Key Laboratory of Oral Diseases of Gansu Province Key Laboratory of Stomatology of State Ethnic Affairs Commission Northwest Minzu University Lanzhou China
| | - Jianye Zhou
- Department of Dentistry Key Laboratory of Oral Diseases of Gansu Province Key Laboratory of Stomatology of State Ethnic Affairs Commission Northwest Minzu University Lanzhou China
| | - Bin Ma
- Department of Dentistry Key Laboratory of Oral Diseases of Gansu Province Key Laboratory of Stomatology of State Ethnic Affairs Commission Northwest Minzu University Lanzhou China
| | - Fei Yu
- Department of Dentistry Lanzhou University Lanzhou, Gansu Province China
| | - Xin Zheng
- Department of Dentistry Key Laboratory of Oral Diseases of Gansu Province Key Laboratory of Stomatology of State Ethnic Affairs Commission Northwest Minzu University Lanzhou China
| | - Xiaopan Hu
- Department of Dentistry Key Laboratory of Oral Diseases of Gansu Province Key Laboratory of Stomatology of State Ethnic Affairs Commission Northwest Minzu University Lanzhou China
| | - Zhongming Ma
- Department of Dentistry Key Laboratory of Oral Diseases of Gansu Province Key Laboratory of Stomatology of State Ethnic Affairs Commission Northwest Minzu University Lanzhou China
| | - Xuelian Su
- Department of Dentistry Key Laboratory of Oral Diseases of Gansu Province Key Laboratory of Stomatology of State Ethnic Affairs Commission Northwest Minzu University Lanzhou China
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Chen W, Jiang Q, Yan G, Yang D. The oral microbiome and salivary proteins influence caries in children aged 6 to 8 years. BMC Oral Health 2020; 20:295. [PMID: 33115458 PMCID: PMC7592381 DOI: 10.1186/s12903-020-01262-9] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2019] [Accepted: 09/23/2020] [Indexed: 12/27/2022] Open
Abstract
BACKGROUND Oral microbiome and salivary proteins play a critical role in the occurrence and development of caries. In this study, we used metagenomic and metaproteomic analyses to explore the microbiological and proteinic biomarkers and investigate the etiology of caries in 6-8 years old children. Our study aims to offer a better comprehension of these factors and the relationship with caries, and these findings might facilitate caries risk assessment and provide a basis for future prevention strategies. METHODS Children 6 to 8 years old living in rural isolated areas including 40 caries-active subjects and 40 caries-free subjects were recruited. Supragingival plaque and unstimulated saliva were collected for 16S rDNA pyrosequencing and isobaric tags for relative and absolute quantitation (iTRAQ) technique coupled with quantitative nano-flow liquid chromatography-tandem mass spectrometry (LC-MS/MS), respectively. RESULTS We found 6 phyla and 13 genera predominant in all the samples, and differences in relative abundances can be observed. The Alpha diversity analysis demonstrated that the richness and diversity of the bacterial communities were similar between children with caries-free and caries-active groups; LEfSe detected differences in the bacterial community including Dialister, Selenomonas, Actinomyces, and Mogibacterium in the caries-active group (P < 0.05) and Capnocytophaga, Fusobacterium, Desulfuromonadales, Haemophilus, and Porphyromonas in the caries-free group(P < 0.05). The core microbiome was defined as 18 predominant genera in children with caries. The results of the salivary proteome identified 9135 unique peptides and 1662 proteins group from 20 salivary samples. Two hundred fifty-eight proteins were differentially expressed between the caries-free and caries-active groups. CONCLUSIONS The diversity of the microbial community has little effect on caries but some bacteria with different relative abundance between the caries-active and caries-free group could be considered as potential biomarkers for children with caries. In addition, as a critical host factor of caries, the salivary proteins are different in caries-free and caries-active groups.
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Affiliation(s)
- Wang Chen
- College of Stomatology, Chongqing Medical University, Chongqing, China.,Chongqing key Laboratory of Oral Diseases and Biomedical Sciences, Chongqing, China
| | - Qian Jiang
- College of Stomatology, Chongqing Medical University, Chongqing, China.,Chongqing key Laboratory of Oral Diseases and Biomedical Sciences, Chongqing, China
| | - Guowei Yan
- College of Stomatology, Chongqing Medical University, Chongqing, China.,Chongqing key Laboratory of Oral Diseases and Biomedical Sciences, Chongqing, China
| | - Deqin Yang
- College of Stomatology, Chongqing Medical University, Chongqing, China. .,Chongqing key Laboratory of Oral Diseases and Biomedical Sciences, Chongqing, China.
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Hu XP, Zhou HJ, Li ZQ, Song TZ, Zhu YY. Lack of associations between lactoferrin ( LTF) and mannose-binding lectin 2 ( MBL2) gene polymorphism and dental caries susceptibility. J Int Med Res 2020; 48:300060520943428. [PMID: 32721184 PMCID: PMC7388124 DOI: 10.1177/0300060520943428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022] Open
Abstract
Objective With the development of human genomics, the genetic factors associated with
dental caries have receiving increasing attention. This study was performed
to evaluate the relationship between lactoferrin (LTF) and
mannose-binding lectin 2 (MBL2) gene single nucleotide
polymorphisms (SNPs) and dental caries susceptibility in Chinese
children. Methods This prospective case–control study included 360 unrelated children (aged
12–15 years) who received oral health examinations and questionnaire
surveys. The children were divided into two groups by counting the numbers
of decayed, missing, and filled teeth (DMFT/dmft): case group (n = 162,
DMFT/dmft ≥ 1) and control group (n = 198, DMFT/dmft = 0); non-invasive
saliva samples were collected to extract genomic DNA. Six SNPs
(rs2073495C/G, rs1042073C/T, rs10865941C/T, and
rs1126477A/G in LTF;
rs7096206C/G and rs7095891G/A in
MBL2) were tested by mass spectrometry. Results The study included 360 individuals with (85 boys and 77 girls) and without a
history of caries (96 boys and 102 girls). There were no statistically
significant differences in alleles and genotypes among the six SNPs between
the two groups. Conclusion There is no evidence that polymorphisms of LTF and
MBL2 genes are associated with dental caries
susceptibility in populations from northwest China; further confirmation is
needed with larger sample sizes.
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Affiliation(s)
- Xiao-Pan Hu
- Key Laboratory of Oral Diseases of Gansu Province, Lanzhou, China
| | - Hai-jing Zhou
- Key Laboratory of Oral Diseases of Gansu Province, Lanzhou, China
| | - Zhi-Qiang Li
- Key Laboratory of Stomatology of the State Ethnic Affairs Commission, Northwest Minzu University, Lanzhou, China
| | - Tian-Zhu Song
- Key Laboratory of Oral Diseases of Gansu Province, Lanzhou, China
| | - Yan-Yan Zhu
- Key Laboratory of Oral Diseases of Gansu Province, Lanzhou, China
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8
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Li X, Su Y, Liu D, Yang J. The association between genetic variants in lactotransferrin and dental caries: a meta- and gene-based analysis. BMC MEDICAL GENETICS 2020; 21:114. [PMID: 32460726 PMCID: PMC7251739 DOI: 10.1186/s12881-020-01029-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/16/2020] [Accepted: 04/20/2020] [Indexed: 11/10/2022]
Abstract
BACKGROUND The pathogenesis of dental caries remains unclear, with increasing evidence suggesting that genetic susceptibility plays an essential role. Previous studies have reported the association between genetic polymorphisms in lactotransferrin (LTF) and the risk of dental caries with inconsistent results. METHODS A systematic literature search of the PubMed, Cochrane Library, HuGE and Google Scholar databases was performed by two authors independently for papers published before December 5, 2019 on the association between genetic variants in LTF and the risk of dental caries. We adopted the subsequent inclusion criteria to assess study eligibility: 1) The studies were based on human subjects; 2) the presence of dental caries should be screened for in both the case group and the control group; and 3) genotype data on variants in LTF were available in both the case group and the control group. We calculated odds ratios (ORs) and the corresponding 95% confidence intervals (CIs) by using random-effects models to assess the association of genetic variants in LTF with the risk of dental caries. We also performed a gene-based analysis to explore the joint association of multiple genetic variants in LTF with the risk of dental caries. RESULTS Our systematic literature search identified six relevant papers for analysis. We found no significant association between rs1126478 and the risk of dental caries when meta-analysing the genotype distribution between subjects with dental caries and those without dental caries (additive model: OR = 1.41; 95% CI = 0.98-2.02; P = 0.065). However, further analysis indicated that rs1126478 was associated with dental risk in subjects who had moderate or severe dental caries compared to those without dental caries (P < 0.0001). The gene-based analysis indicated that multiple genetic variants in LTF were jointly associated with the risk of dental caries (P = 0.002). CONCLUSIONS The present meta-analysis revealed some evidence of the association between rs1126478 and dental caries and that multiple genetic variants in LTF are jointly associated with the risk of dental caries. Our findings need to be validated by larger studies that adjust for important confounding factors for the risk of dental caries.
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Affiliation(s)
- Xueyan Li
- Department of Stomatology, Eye & Ent Hospital of Fudan University, Shanghai, China
| | - Yi Su
- Department of Stomatology, Eye & Ent Hospital of Fudan University, Shanghai, China
| | - Di Liu
- Beijing Key Laboratory of Clinical Epidemiology, School of Public Health, Capital Medical University, Beijing, China
| | - Jingyun Yang
- Division of Statistics, School of Economics, Shanghai University, 99 Shangda Rd, Baoshan Dist, Shanghai, 200444, China. .,Research Center of Financial Information, Shanghai University, Shanghai, China. .,Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, IL, USA. .,Department of Neurological Sciences, Rush University Medical Center, Chicago, IL, USA.
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Zupin L, Polesello V, Segat L, Kamada AJ, Kuhn L, Crovella S. Association Between LTF Polymorphism and Risk of HIV-1 Transmission Among Zambian Seropositive Mothers. Curr HIV Res 2019; 16:52-57. [PMID: 29165086 DOI: 10.2174/1570162x15666171120105752] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2017] [Revised: 10/11/2017] [Accepted: 11/14/2017] [Indexed: 11/22/2022]
Abstract
BACKGROUND Lactoferrin is a member of the innate immune system acting in the first line of defence against pathogens, and it is known for its antibacterial, antifungal and antiviral activity, including HIV-1. Two polymorphisms, T29A and R47K, in the exon 1 region of the LTF gene (encoding for the lactoferrin protein) were previously described as able to influence the lactoferrin antimicrobial function. OBJECTIVES LTF T29A and R47K genetic variants were analysed in a Zambian population to unravel if these polymorphisms could play a role in HIV-1 mother-to-child HIV-1 transmission. METHODS LTF T29A and R47K polymorphisms were genotyped, using allelic specific fluorescent probes and real time PCR, in a population comprising 101 HIV-1 positive mothers and 333 children born to seropositive mothers. RESULTS Maternal LTF T29A A/A and A/G genotypes were found to be associated with decreased risk of HIV-1 MTCT, being more frequent among non-transmitter mothers respect to transmitter mothers. CONCLUSION Our data suggested that maternal LTF genetic background contributes to the susceptibility to HIV-1 transmission from mother to new-borns.
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Affiliation(s)
- Luisa Zupin
- Department of Medicine, Surgery and Health Sciences, University of Trieste, Trieste, Italy
| | - Vania Polesello
- Institute for Maternal and Child Health IRCCS "Burlo Garofolo", Trieste, Italy
| | - Ludovica Segat
- Institute for Maternal and Child Health IRCCS "Burlo Garofolo", Trieste, Italy
| | | | - Louise Kuhn
- Gertrude H. Sergievsky Center and Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, United States
| | - Sergio Crovella
- Department of Medicine, Surgery and Health Sciences, University of Trieste, Trieste, Italy.,Institute for Maternal and Child Health IRCCS "Burlo Garofolo", Trieste, Italy
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Nibali L, Di Iorio A, Tu YK, Vieira AR. Host genetics role in the pathogenesis of periodontal disease and caries. J Clin Periodontol 2018; 44 Suppl 18:S52-S78. [PMID: 27754553 DOI: 10.1111/jcpe.12639] [Citation(s) in RCA: 58] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/06/2016] [Indexed: 12/25/2022]
Abstract
BACKGROUND This study aimed to produce the latest summary of the evidence for association of host genetic variants contributing to both periodontal diseases and caries. MATERIALS AND METHODS Two systematic searches of the literature were conducted in Ovid Medline, Embase, LILACS and Cochrane Library for large candidate gene studies (CGS), systematic reviews and genome-wide association studies reporting data on host genetic variants and presence of periodontal disease and caries. RESULTS A total of 124 studies were included in the review (59 for the periodontitis outcome and 65 for the caries outcome), from an initial search of 15,487 titles. Gene variants associated with periodontitis were categorized based on strength of evidence and then compared with gene variants associated with caries. Several gene variants showed moderate to strong evidence of association with periodontitis, although none of them had also been associated with the caries trait. CONCLUSIONS Despite some potential aetiopathogenic similarities between periodontitis and caries, no genetic variants to date have clearly been associated with both diseases. Further studies or comparisons across studies with large sample size and clear phenotype definition could shed light into possible shared genetic risk factors for caries and periodontitis.
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Affiliation(s)
- Luigi Nibali
- Centre for Oral Clinical Research, Institute of Dentistry, Barts and The London School of Medicine and Dentistry, Queen Mary University London (QMUL), London, UK
| | - Anna Di Iorio
- Library Services, UCL Eastman Dental Institute, London, UK
| | - Yu-Kang Tu
- Graduate Institute of Epidemiology and Preventive Medicine, College of Public Health, National Taiwan University, Taipei, Taiwan
| | - Alexandre R Vieira
- Department of Oral Biology, University of Pittsburgh School of Dental Medicine, Pittsburgh, PA, USA
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11
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Wang M, Qin M. Lack of association between LTF gene polymorphisms and different caries status in primary dentition. Oral Dis 2018; 24:1545-1553. [PMID: 29989276 DOI: 10.1111/odi.12939] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2018] [Revised: 06/27/2018] [Accepted: 07/02/2018] [Indexed: 12/19/2022]
Abstract
OBJECTIVE Dental caries is related to cariogenic bacteria, salivary components, oral hygiene and host susceptibility. Lactoferrin is an important antimicrobial glycoprotein in saliva; however, the role of the LTF gene in caries susceptibility is unclear. We investigated the association between LTF polymorphisms and the severity of caries. DESIGN Our study included 910 healthy paediatric subjects (aged 24-48 months) categorised into three groups: 403 with no caries or white-spot lesions; 230 with moderate caries (8 ≤ dmft ≤ 12); and 277 with severe caries (13 ≤ dmft ≤ 20). Information regarding the subjects' oral habits was gathered using questionnaires. The LTF rs1126477 and rs1126478 polymorphism alleles were genotyped by Sanger sequencing. RESULTS The three groups showed no significant differences in LTF polymorphisms alleles, genotypes or haplotypes distribution. Multifactor dimensionality reduction analysis showed that the interactions between breastfeeding for a duration >24 months, night feeding >24 months and high frequency of sweet food intake increased the risk of caries (p = 0.0014); however, we detected no interaction effect between the LTF polymorphisms and oral habits on caries susceptibility. CONCLUSIONS The LTF rs1126477 and rs1126478 polymorphisms showed no association with the different levels of caries risk in our Chinese paediatric cohort.
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Affiliation(s)
- Mengchen Wang
- Department of Paediatric Dentistry, Peking University School and Hospital of Stomatology, Beijing, China.,Department of Stomatology, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing, China
| | - Man Qin
- Department of Paediatric Dentistry, Peking University School and Hospital of Stomatology, Beijing, China
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12
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Banas JA, Drake DR. Are the mutans streptococci still considered relevant to understanding the microbial etiology of dental caries? BMC Oral Health 2018; 18:129. [PMID: 30064426 PMCID: PMC6069834 DOI: 10.1186/s12903-018-0595-2] [Citation(s) in RCA: 68] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2018] [Accepted: 07/23/2018] [Indexed: 12/16/2022] Open
Abstract
The mutans streptococci were once the primary focus of research dedicated to understanding the etiology of dental caries. That focus has now shifted to an emphasis on the ecological balances and complexities within the entirety of the plaque microbiome. Within that framework there are considerable differences of opinion regarding the importance and relative contributions of the mutans streptococci. This article explores the basis for the various viewpoints, the limitations of current knowledge, and the confounders that make it difficult to arrive at a consensus.
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Affiliation(s)
- Jeffrey A Banas
- Iowa Institute for Oral Health Research, University of Iowa College of Dentistry, N406A DSB, Iowa City, Iowa, 52242, USA.
| | - David R Drake
- Iowa Institute for Oral Health Research, University of Iowa College of Dentistry, N406A DSB, Iowa City, Iowa, 52242, USA
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13
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Alexander MR, Norlander AE, Elijovich F, Atreya RV, Gaye A, Gnecco JS, Laffer CL, Galindo CL, Madhur MS. Human monocyte transcriptional profiling identifies IL-18 receptor accessory protein and lactoferrin as novel immune targets in hypertension. Br J Pharmacol 2018; 176:2015-2027. [PMID: 29774543 DOI: 10.1111/bph.14364] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Revised: 03/30/2018] [Accepted: 04/30/2018] [Indexed: 12/16/2022] Open
Abstract
BACKGROUND AND PURPOSE Monocytes play a critical role in hypertension. The purpose of our study was to use an unbiased approach to determine whether hypertensive individuals on conventional therapy exhibit an altered monocyte gene expression profile and to perform validation studies of selected genes to identify novel therapeutic targets for hypertension. EXPERIMENTAL APPROACH Next generation RNA sequencing identified differentially expressed genes in a small discovery cohort of normotensive and hypertensive individuals. Several of these genes were further investigated for association with hypertension in multiple validation cohorts using qRT-PCR, regression analysis, phenome-wide association study and case-control analysis of a missense polymorphism. KEY RESULTS We identified 60 genes that were significantly differentially expressed in hypertensive monocytes, many of which are related to IL-1β. Uni- and multivariate regression analyses of the expression of these genes with mean arterial pressure (MAP) revealed four genes that significantly correlated with MAP in normotensive and/or hypertensive individuals. Of these, lactoferrin (LTF), peptidoglycan recognition protein 1 and IL-18 receptor accessory protein (IL18RAP) remained significantly elevated in peripheral monocytes of hypertensive individuals in a separate validation cohort. Interestingly, IL18RAP expression associated with MAP in a cohort of African Americans. Furthermore, homozygosity for a missense single nucleotide polymorphism in LTF that decreases antimicrobial function and increases protein levels (rs1126478) was over-represented in patients with hypertension relative to controls (odds ratio 1.16). CONCLUSIONS AND IMPLICATIONS These data demonstrate that monocytes exhibit enhanced pro-inflammatory gene expression in hypertensive individuals and identify IL18RAP and LTF as potential novel mediators of human hypertension. LINKED ARTICLES This article is part of a themed section on Immune Targets in Hypertension. To view the other articles in this section visit http://onlinelibrary.wiley.com/doi/10.1111/bph.v176.12/issuetoc.
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Affiliation(s)
- Matthew R Alexander
- Division of Cardiovascular Medicine, Vanderbilt University Medical Center, Nashville, TN, USA
| | - Allison E Norlander
- Department of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN, USA
| | - Fernando Elijovich
- Division of Clinical Pharmacology, Vanderbilt University Medical Center, Nashville, TN, USA
| | - Ravi V Atreya
- Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, USA
| | - Amadou Gaye
- Metabolic, Cardiovascular and Inflammatory Disease Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA
| | - Juan S Gnecco
- Department of Pathology, Microbiology, and Immunology, Vanderbilt University, Nashville, TN, USA
| | - Cheryl L Laffer
- Division of Clinical Pharmacology, Vanderbilt University Medical Center, Nashville, TN, USA
| | - Cristi L Galindo
- Division of Cardiovascular Medicine, Vanderbilt University Medical Center, Nashville, TN, USA
| | - Meena S Madhur
- Division of Cardiovascular Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.,Department of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN, USA.,Division of Clinical Pharmacology, Vanderbilt University Medical Center, Nashville, TN, USA
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Velliyagounder K, Bahdila D, Pawar S, Fine DH. Role of lactoferrin and lactoferrin‐derived peptides in oral and maxillofacial diseases. Oral Dis 2018; 25:652-669. [DOI: 10.1111/odi.12868] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2017] [Revised: 02/20/2018] [Accepted: 03/17/2018] [Indexed: 12/30/2022]
Affiliation(s)
- K Velliyagounder
- Department of Oral BiologyRutgers School of Dental Medicine Newark New Jersey
| | - D Bahdila
- Department of Oral BiologyRutgers School of Dental Medicine Newark New Jersey
| | - S Pawar
- Department of Oral BiologyRutgers School of Dental Medicine Newark New Jersey
| | - DH Fine
- Department of Oral BiologyRutgers School of Dental Medicine Newark New Jersey
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15
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Hemadi AS, Huang R, Zhou Y, Zou J. Salivary proteins and microbiota as biomarkers for early childhood caries risk assessment. Int J Oral Sci 2017; 9:e1. [PMID: 29125139 PMCID: PMC5775330 DOI: 10.1038/ijos.2017.35] [Citation(s) in RCA: 86] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/01/2017] [Indexed: 02/05/2023] Open
Abstract
Early childhood caries (ECC) is a term used to describe dental caries in children aged 6 years or younger. Oral streptococci, such as Streptococcus mutans and Streptococcus sorbrinus, are considered to be the main etiological agents of tooth decay in children. Other bacteria, such as Prevotella spp. and Lactobacillus spp., and fungus, that is, Candida albicans, are related to the development and progression of ECC. Biomolecules in saliva, mainly proteins, affect the survival of oral microorganisms by multiple innate defensive mechanisms, thus modulating the oral microflora. Therefore, the protein composition of saliva can be a sensitive indicator for dental health. Resistance or susceptibility to caries may be significantly correlated with alterations in salivary protein components. Some oral microorganisms and saliva proteins may serve as useful biomarkers in predicting the risk and prognosis of caries. Current research has generated abundant information that contributes to a better understanding of the roles of microorganisms and salivary proteins in ECC occurrence and prevention. This review summarizes the microorganisms that cause caries and tooth-protective salivary proteins with their potential as functional biomarkers for ECC risk assessment. The identification of biomarkers for children at high risk of ECC is not only critical for early diagnosis but also important for preventing and treating the disease.
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Affiliation(s)
- Abdullah S Hemadi
- State Key Laboratory of Oral Diseases & National Clinical Research Center for Oral Diseases & Department of Pediatric Dentistry, West China Hospital of Stomatology, Sichuan University, Chengdu, China
| | - Ruijie Huang
- State Key Laboratory of Oral Diseases & National Clinical Research Center for Oral Diseases & Department of Pediatric Dentistry, West China Hospital of Stomatology, Sichuan University, Chengdu, China
| | - Yuan Zhou
- State Key Laboratory of Oral Diseases & National Clinical Research Center for Oral Diseases & Department of Pediatric Dentistry, West China Hospital of Stomatology, Sichuan University, Chengdu, China
| | - Jing Zou
- State Key Laboratory of Oral Diseases & National Clinical Research Center for Oral Diseases & Department of Pediatric Dentistry, West China Hospital of Stomatology, Sichuan University, Chengdu, China
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16
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Kruzel ML, Zimecki M, Actor JK. Lactoferrin in a Context of Inflammation-Induced Pathology. Front Immunol 2017; 8:1438. [PMID: 29163511 PMCID: PMC5681489 DOI: 10.3389/fimmu.2017.01438] [Citation(s) in RCA: 173] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2017] [Accepted: 10/16/2017] [Indexed: 12/30/2022] Open
Abstract
Much progress has been achieved to elucidate the function of lactoferrin (LTF), an iron-binding glycoprotein, in the milieu of immune functionality. This review represents a unique examination of LTF toward its importance in physiologic homeostasis as related to development of disease-associated pathology. The immunomodulatory nature of this protein derives from its unique ability to "sense" the immune activation status of an organism and act accordingly. Underlying mechanisms are proposed whereby LTF controls disease states, thereby pinpointing regions of entry for LTF in maintenance of various physiological pathways to limit the magnitude of tissue damage. LTF is examined as a first line mediator in immune defense and response to pathogenic and non-pathogenic injury, as well as a molecule critical for control of oxidative cell function. Mechanisms of interaction of LTF with its receptors are examined, with a focus on protective effects via regulation of enzyme activities and reactive oxygen species production, immune deviation, and prevention of cell apoptosis. Indeed, LTF serves as a critical control point in physiologic homeostasis, functioning as a sensor of immunological performance related to pathology. Specific mediation of tissue pathophysiology is described for maintenance of intestinal integrity during endotoxemia, elicited airway inflammation due to allergens, and pulmonary damage during tuberculosis. Finally, the role of LTF to alter differentiation of adaptive immune function is examined, with specific recognition of its utility as a vaccine adjuvant to control subsequent lymphocytic reactivity. Overall, it is clear that while the ability of LTF to both sequester iron and to direct reactive oxygen intermediates is a major factor in lessening damage due to excessive inflammatory responses, further effects are apparent through direct control over development of higher order immune functions that regulate pathology due to insult and injury. This culminates in attenuation of pathological damage during inflammatory injury.
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Affiliation(s)
- Marian L. Kruzel
- McGovern Medical School, University of Texas, Health Science Center, Houston, TX, United States
| | - Michal Zimecki
- Polish Academy of Sciences, Institute of Immunology and Experimental Therapy, Wrocław, Poland
| | - Jeffrey K. Actor
- McGovern Medical School, University of Texas, Health Science Center, Houston, TX, United States
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17
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Piekoszewska-Ziętek P, Turska-Szybka A, Olczak-Kowalczyk D. Single Nucleotide Polymorphism in the Aetiology of Caries: Systematic Literature Review. Caries Res 2017; 51:425-435. [PMID: 28668961 DOI: 10.1159/000476075] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2016] [Accepted: 04/24/2017] [Indexed: 01/20/2023] Open
Abstract
Recent progress in the field of molecular biology and techniques of DNA sequence analysis allowed determining the meaning of hereditary factors of many common human diseases. Studies of genetic mechanisms in the aetiology of caries encompass, primarily, 4 main groups of genes responsible for (1) the development of enamel, (2) formation and composition of saliva, (3) immunological responses, and (4) carbohydrate metabolism. The aim of this study was to present current knowledge about the influence of single nucleotide polymorphism (SNP) genetic variants on the occurrence of dental caries. PubMed/Medline, Embase, and Cochrane Library databases were searched for papers on the influence of genetic factors connected with SNP on the occurrence of dental caries in children, teenagers, and adults. Thirty original papers written in English were included in this review. Study groups ranged from 30 to 13,000 subjects. SNPs were observed in 30 genes. Results of the majority of studies confirm the participation of hereditary factors in the aetiology of caries. Three genes, AMELX, AQP5, and ESRRB, have the most promising evidence based on multiple replications and data, supporting a role of these genes in caries. The review of the literature proves that SNP is linked with the aetiology of dental caries.
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18
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Wang M, Qin M, Xia B. The association of Enamelin, Lactoferrin, and Tumour necrosis factor alpha gene polymorphisms with high caries susceptibility in Chinese children under 4 years old. Arch Oral Biol 2017; 80:75-81. [PMID: 28395167 DOI: 10.1016/j.archoralbio.2017.03.023] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2016] [Revised: 03/15/2017] [Accepted: 03/29/2017] [Indexed: 01/17/2023]
Abstract
OBJECTIVE The aim of this study was to assess the role of ENAM rs3796703, LTF rs1126478, and TNF-α rs1800629 in high caries susceptibility. DESIGN The present case-control study included 1005 unrelated children under 4 years old: 505 with severe caries (dmft index ≥4) and 500 who were caries-free (dmft index=0 and without white-spot lesions). Questionnaires were obtained from parents and gardians about the children's diet and oral behavioural habits. All the children received dental examinations and oral swabbing for human genomic DNA collection. ENAM rs3796703, LTF rs1126478, and TNF-α rs1800629 were genotyped by Sanger sequencing. RESULTS The frequency of the ENAM rs3796703T allele (6.7% in the caries group and 4.2% in the caries-free group), CT genotype (12.7% in the caries group and 8.4% in the caries-free group), TNF-α rs1800629 A allele (4.8% in the caries group and 6.8% in the caries-free group), and AG genotype (8.7% in the caries group and 13.2% in the caries-free group) were significantly different between the caries and caries-free groups (p<0.05). No significant difference was found in the LTF rs1126478 allele frequency and genotype distribution between the two groups. The ENAM rs3796703 CT genotype increased caries susceptibility by 60.9% compared to the CC genotype (β=0.746, OR=1.609), and the TNF-α rs1800629 AG genotype reduced caries susceptibility by 47.4% compared to the GG genotype (β=-0.642, OR=0.526). In terms of habits covariates, prolongation of night feeding time by 1 month increased caries susceptibility by 3.3% (β=0.033, OR=1.033); additionally, sweets and acidic drinks consumption 1-2 times per day increased caries susceptibility by 218.2% (β=1.158, OR=3.182), and consumption 3 or more times pe/r day increased susceptibility by 883.5% (β=2.286, OR=9.835) compared to non-consumption. Topical fluoride application decreased caries susceptibility by 43.0% (β=-0.562, OR=0.570). CONCLUSIONS The ENAM and TNF-α genes are likely associated with caries experience in Chinese children. The ENAM rs3796703 CT genotype might be involved in caries susceptibility, while TNF-α rs1800629 AG genotype might be involved in caries protection.
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Affiliation(s)
- Mengchen Wang
- Department of Pediatric Dentistry, Peking University School and Hospital of Stomatology, 22 Zhongguancun Avenue South, Haidian District, Beijing 100081, PR China.
| | - Man Qin
- Department of Pediatric Dentistry, Peking University School and Hospital of Stomatology, 22 Zhongguancun Avenue South, Haidian District, Beijing 100081, PR China.
| | - Bin Xia
- Department of Pediatric Dentistry, Peking University School and Hospital of Stomatology, 22 Zhongguancun Avenue South, Haidian District, Beijing 100081, PR China.
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19
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Lips A, Antunes LS, Antunes LA, Abreu JGBD, Barreiros D, Oliveira DSBD, Batista AC, Nelson-Filho P, Silva LABD, Silva RABD, Alves GG, Küchler EC. Genetic Polymorphisms in DEFB1 and miRNA202 Are Involved in Salivary Human β-Defensin 1 Levels and Caries Experience in Children. Caries Res 2017; 51:209-215. [DOI: 10.1159/000458537] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Accepted: 01/30/2017] [Indexed: 01/29/2023] Open
Abstract
The antimicrobial peptides human β-defensins (hBDs) are encoded by β-defensin genes (DEFBs) and are possibly involved in caries susceptibility. In this study we aimed (1) to investigate the relationship between salivary hBDs and caries and (2) to evaluate the association of genetic polymorphisms in DEFB1 and microRNA202 (miRNA202) with salivary levels of hBDs and caries experience. Two data sets were available for this study, totalizing 678 Brazilian children. Dental examination and saliva collection were performed in all included children. The salivary level for hDB1, hBD2, and hBD4 was assessed by ELISA sandwich technique in 168 children. The DNA was extracted from saliva, and polymorphisms in DEFB1 and miRNA202 were analyzed by real-time PCR. Statistical analysis was performed to investigate the associations between caries experience, hBD salivary level, genotype, and allele distribution, with an alpha of 0.05. The hBD1 level was significantly higher in caries-free children (p < 0.0001). The miRNA202 was associated with a lower level of salivary hBD1 (p < 0.05). Also, the polymorphic distribution of miRNA202 was associated with caries (p = 0.006). The polymorphisms in DEFB1 were not associated with hBD salivary level and caries experience (p > 0.05). In conclusion, our results indicate that genetic polymorphism in miRNA202 is involved in hBD1 salivary level as well as caries experience in children.
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20
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LIPS A, ANTUNES LS, ANTUNES LA, PINTOR AVB, SANTOS DABD, BACHINSKI R, KÜCHLER EC, ALVES GG. Salivary protein polymorphisms and risk of dental caries: a systematic review. Braz Oral Res 2017; 31:e41. [DOI: 10.1590/1807-3107bor-2017.vol31.0041] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2015] [Accepted: 04/12/2017] [Indexed: 11/22/2022] Open
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21
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Lactoferrin gene polymorphisms in Italian patients with recurrent tonsillitis. Int J Pediatr Otorhinolaryngol 2016; 88:153-6. [PMID: 27497404 DOI: 10.1016/j.ijporl.2016.07.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/31/2016] [Accepted: 07/02/2016] [Indexed: 11/22/2022]
Abstract
INTRODUCTION Recurrent tonsillitis is an oral pathology characterized by inflammation of tonsils. The disease susceptibility depends upon environmental and host factors, specifically the innate immune response, the first line of host defence could play an important role. Among innate immunity members, lactoferrin, known for its antimicrobial properties, was previously correlated with the risk of oral pathology as periodontitis and dental caries. METHODS 89 Italian children presenting recurrent tonsillitis and 95 healthy children were genotyped for two LTF non-synonymous polymorphisms, called Thr29Ala and Arg47Lys, in order to investigate their potential role in recurrent tonsillitis susceptibility. RESULTS no different allele, genotype and haplotype frequency distributions were detected comparing patients and controls. CONCLUSION data from the current study indicate that LTF polymorphisms might not be involved in recurrent tonsillitis development in our Italian population. However, since the importance of lactoferrin in oral immunity has been previously assessed, further studies should be necessary to unravel the potential role of LTF genetic variants in oral cavity.
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22
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Pomastowski P, Sprynskyy M, Žuvela P, Rafińska K, Milanowski M, Liu JJ, Yi M, Buszewski B. Silver-Lactoferrin Nanocomplexes as a Potent Antimicrobial Agent. J Am Chem Soc 2016; 138:7899-909. [DOI: 10.1021/jacs.6b02699] [Citation(s) in RCA: 59] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Paweł Pomastowski
- Department
of Environmental Chemistry and Bioanalytics, Faculty of Chemistry,
Interdisciplinary Centre for Modern Technologies, Nicolaus Copernicus University, 87-100 Toruń, Poland
| | - Myroslav Sprynskyy
- Department
of Environmental Chemistry and Bioanalytics, Faculty of Chemistry,
Interdisciplinary Centre for Modern Technologies, Nicolaus Copernicus University, 87-100 Toruń, Poland
| | - Petar Žuvela
- Department
of Chemical Engineering, Pukyong National University, 365 Sinseon-ro,
Nam-gu, 608-739 Busan, Korea
| | - Katarzyna Rafińska
- Department
of Environmental Chemistry and Bioanalytics, Faculty of Chemistry,
Interdisciplinary Centre for Modern Technologies, Nicolaus Copernicus University, 87-100 Toruń, Poland
| | - Maciej Milanowski
- Department
of Environmental Chemistry and Bioanalytics, Faculty of Chemistry,
Interdisciplinary Centre for Modern Technologies, Nicolaus Copernicus University, 87-100 Toruń, Poland
| | - J. Jay Liu
- Department
of Chemical Engineering, Pukyong National University, 365 Sinseon-ro,
Nam-gu, 608-739 Busan, Korea
| | - Myunggi Yi
- Department
of Biomedical Engineering, Pukyong National University, 45 Yongso-ro,
Nam-gu, 608-737 Busan, Korea
| | - Bogusław Buszewski
- Department
of Environmental Chemistry and Bioanalytics, Faculty of Chemistry,
Interdisciplinary Centre for Modern Technologies, Nicolaus Copernicus University, 87-100 Toruń, Poland
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23
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Barber MF, Kronenberg Z, Yandell M, Elde NC. Antimicrobial Functions of Lactoferrin Promote Genetic Conflicts in Ancient Primates and Modern Humans. PLoS Genet 2016; 12:e1006063. [PMID: 27203426 PMCID: PMC4874600 DOI: 10.1371/journal.pgen.1006063] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2016] [Accepted: 04/27/2016] [Indexed: 01/10/2023] Open
Abstract
Lactoferrin is a multifunctional mammalian immunity protein that limits microbial growth through sequestration of nutrient iron. Additionally, lactoferrin possesses cationic protein domains that directly bind and inhibit diverse microbes. The implications for these dual functions on lactoferrin evolution and genetic conflicts with microbes remain unclear. Here we show that lactoferrin has been subject to recurrent episodes of positive selection during primate divergence predominately at antimicrobial peptide surfaces consistent with long-term antagonism by bacteria. An abundant lactoferrin polymorphism in human populations and Neanderthals also exhibits signatures of positive selection across primates, linking ancient host-microbe conflicts to modern human genetic variation. Rapidly evolving sites in lactoferrin further correspond to molecular interfaces with opportunistic bacterial pathogens causing meningitis, pneumonia, and sepsis. Because microbes actively target lactoferrin to acquire iron, we propose that the emergence of antimicrobial activity provided a pivotal mechanism of adaptation sparking evolutionary conflicts via acquisition of new protein functions. Immunity genes can evolve rapidly in response to antagonism by microbial pathogens, but how the emergence of new protein functions impacts such evolutionary conflicts remains unclear. Here we have traced the evolutionary history of the lactoferrin gene in primates, which in addition to an ancient iron-binding function, acquired antimicrobial peptide activity in mammals. We show that, in contrast to the related gene transferrin, lactoferrin has rapidly evolved at protein domains that mediate iron-independent antimicrobial functions. We also pinpoint signatures of natural selection acting on lactoferrin in human populations, suggesting that lactoferrin genetic diversity has impacted the evolutionary success of both ancient primates and humans. Our work demonstrates how the emergence of new host immune protein functions can drastically alter evolutionary and molecular interactions with microbes.
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Affiliation(s)
- Matthew F Barber
- Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America
| | - Zev Kronenberg
- Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America
| | - Mark Yandell
- Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America
| | - Nels C Elde
- Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America
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24
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Velusamy SK, Markowitz K, Fine DH, Velliyagounder K. Human lactoferrin protects againstStreptococcus mutans-induced caries in mice. Oral Dis 2016; 22:148-54. [DOI: 10.1111/odi.12401] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2015] [Revised: 11/05/2015] [Accepted: 11/09/2015] [Indexed: 12/14/2022]
Affiliation(s)
- SK Velusamy
- RUTGERS School of Dental Medicine; Newark NJ USA
| | - K Markowitz
- RUTGERS School of Dental Medicine; Newark NJ USA
| | - DH Fine
- RUTGERS School of Dental Medicine; Newark NJ USA
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25
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Doetzer AD, Brancher JA, Pecharki GD, Schlipf N, Werneck R, Mira MT, Riess O, Bauer P, Trevilatto PC. Lactotransferrin Gene Polymorphism Associated with Caries Experience. Caries Res 2015; 49:370-7. [DOI: 10.1159/000366211] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2014] [Accepted: 07/25/2014] [Indexed: 11/19/2022] Open
Abstract
Dental caries is a common multifactorial disease, resulting from the interaction of biofilm, cariogenic diet and host response over time. Lactotransferrin (LTF) is a main salivary glycoprotein, which modulates the host immune-inflammatory and antibacterial response. Although a genetic component for caries outcome has been identified, little is known over the genetic aspects underlying its susceptibility. Thus, the aim of this study was to investigate the association between LTF polymorphisms and caries susceptibility. Six hundred seventy seven 12-year-old students were selected: 346 with (DMFT ≥ 1) and 331 without caries experience (DMFT = 0). Also, individuals concentrating higher levels of disease (polarization group, DMFT ≥ 2, n = 253) were tested against those with DMFT ≤ 1 (n = 424). Along with clinical parameters, three representative LTF tag SNPs (rs6441989, rs2073495, rs11716497) were genotyped and the results were evaluated using univariate and multivariate analyses. Allele A for tag SNP rs6441989 was found to be significantly less frequent in the polarization group, conferring a protective effect against caries experience [AA + AG × GG (OR: 0.710, 95% CI: 0.514-0.980, p = 0.045)], and remained significantly associated with caries protection in the presence of gingivitis (p = 0.020) and plaque (p = 0.035). These results might contribute to the understanding of the genetic control of caries susceptibility in humans.
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26
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Haznedaroğlu E, Koldemir-Gündüz M, Bakır-Coşkun N, Bozkuş HM, Çağatay P, Süsleyici-Duman B, Menteş A. Association of sweet taste receptor gene polymorphisms with dental caries experience in school children. Caries Res 2015; 49:275-81. [PMID: 25924601 DOI: 10.1159/000381426] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2014] [Accepted: 03/04/2015] [Indexed: 11/19/2022] Open
Abstract
Sweet taste is a powerful factor influencing food acceptance. The peripheral taste response to sugar is mediated by the TAS1R2/TAS1R3 taste receptors. The aim of the study was to determine the relationship between TAS1R2 (rs35874116 or rs9701796) and/or TAS1R3 (rs307355) single nucleotide polymorphisms with dental caries experience in schoolchildren. A total of 184 schoolchildren aged between 7 and 12 years (101 girls, 83 boys) were included in the study. Genomic DNA was extracted from saliva samples and the genotypes were identified by qPCR. The genotype frequencies were as follows: 6.6% for homozygous wild type, 41.8% for heterozygous and 51.6% for homozygous polymorphic genotype carriers of TAS1R2 gene rs35874116; 27.8% for heterozygous and 72.2% for homozygous polymorphic genotype carriers of TAS1R2 gene rs9701796, and 83.1% for homozygous wild type and 16.9% for heterozygous genotype carriers of TAS1R3 gene rs307355 polymorphism. A significant association was observed between total caries experience (dft + DMFT - decayed filled primary teeth + decayed, missing and filled permanent teeth) and TAS1R2 rs35874116 (p = 0.008) and TAS1R3 rs307355 (p = 0.04) gene polymorphisms but not for TAS1R2 gene rs9701796 polymorphism. TAS1R3 gene rs307355 polymorphism has been found to be an independent risk factor for dental caries experience by logistic regression analysis and to have increased the risk of caries. Moderate caries experience (4-7 caries) was found to be associated with TAS1R3 rs307355 heterozygous genotype, whereas high-risk caries experience (>8 caries) was found to be associated with TAS1R2 rs35874116 homozygous polymorphic genotype.
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Affiliation(s)
- Eda Haznedaroğlu
- Department of Pediatric Dentistry, Marmara University, Istanbul, Turkey
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27
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Zupin L, Polesello V, Coelho AVC, Boniotto M, Arraes LC, Segat L, Crovella S. Lactotransferrin gene functional polymorphisms do not influence susceptibility to human immunodeficiency virus-1 mother-to-child transmission in different ethnic groups. Mem Inst Oswaldo Cruz 2015; 110:222-9. [PMID: 25946246 PMCID: PMC4489453 DOI: 10.1590/0074-02760140447] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2014] [Accepted: 03/05/2015] [Indexed: 11/29/2022] Open
Abstract
Lactotransferrin, also known as lactoferrin, is an iron binding glycoprotein that
displays antiviral activity against many different infectious agents, including human
immunodeficiency virus (HIV)-1. Lactotransferrin is present in the breast milk and in
the female genitourinary mucosa and it has been hypothesised as a possible candidate
to prevent mother-to-child HIV-1 transmission. To verify if two functional
polymorphisms, Thr29Ala and Arg47Lys, in the lactotransferrin encoding gene (LTF)
could affect HIV-1 infection and vertical transmission, a preliminary association
study was performed in 238 HIV-1 positive and 99 HIV-1 negative children from Brazil,
Italy, Africa and India. No statistically significant association for the Thr29Ala
and Arg47Lys LTF polymorphisms and HIV-1 susceptibility in the studied populations
was found. Additionally LTF polymorphisms frequencies were compared between the four
different ethnic groups.
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Affiliation(s)
- Luisa Zupin
- Institute for Maternal and Child Health, Scientific Institute For Research, Hospitalization and Care Burlo Garofolo, Trieste, Italy
| | - Vania Polesello
- Institute for Maternal and Child Health, Scientific Institute For Research, Hospitalization and Care Burlo Garofolo, Trieste, Italy
| | | | - Michele Boniotto
- Faculty of Medicine, National Institute of Health and Medical Research, University of Paris-Est Créteil, Créteil, France
| | | | - Ludovica Segat
- Institute for Maternal and Child Health, Scientific Institute For Research, Hospitalization and Care Burlo Garofolo, Trieste, Italy
| | - Sergio Crovella
- Institute for Maternal and Child Health, Scientific Institute For Research, Hospitalization and Care Burlo Garofolo, Trieste, Italy
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Abstract
Lactoferrin is one of a number of multifunctional proteins that are present in or on all mucosal surfaces throughout the body. Levels of lactoferrin are consistently elevated in inflammatory diseases such as arthritis, inflammatory bowel diseases, corneal disease, and periodontitis. Single-nucleotide polymorphisms (SNPs) in lactoferrin have been shown to be present in individuals susceptible to Escherichia coli-induced travelers' diarrhea and in tear fluid derived from virally associated corneal disease. Here, we review data showing a lactoferrin SNP in amino acid position 29 in the antimicrobial region of lactoferrin that acts against caries associated bacteria. This SNP was initially discovered in African American subjects with localized aggressive periodontitis (LAP) who had proximal bone loss but minimal proximal caries. Results were confirmed in a genetic association study of children from Brazil with this same SNP who showed a reduced level of caries. In vitro data indicate that lactoferrin from whole saliva derived from subjects with this SNP, recombinant human lactoferrin containing this SNP, or an 11-mer peptide designed for this SNP kills mutans streptococci associated with caries by >1 log. In contrast, the SNP has minimal effect on Gram-negative species associated with periodontitis. Moreover, periodontally healthy subjects homozygous for this lysine (K) SNP have lactoferrin in their saliva that kills mutans streptococci and have reduced proximal decay. The review summarizes data supporting the ecologic plaque hypothesis and suggests that a genetic variant in lactoferrin with K in position 29 when found in saliva and crevice fluid can influence community biofilm composition. We propose that, for caries, this SNP is ethnicity independent and protective by directly killing caries-provoking bacteria (reducing proximal decay). However, the clinical effect of this SNP in LAP is ethnicity dependent, destructive (increases LAP incidence), and complex with mechanisms still to be determined.
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Affiliation(s)
- D H Fine
- Department of Oral Biology, Rutgers School of Dental Medicine, Rutgers University, Newark, NJ, USA
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29
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Vieira AR, Modesto A, Marazita ML. Caries: review of human genetics research. Caries Res 2014; 48:491-506. [PMID: 24853115 PMCID: PMC4167926 DOI: 10.1159/000358333] [Citation(s) in RCA: 95] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2013] [Accepted: 01/03/2014] [Indexed: 12/17/2022] Open
Abstract
The NIH Consensus Development Program released a statement in 2001 (http://consensus.nih.gov/2001/2001DentalCaries115html.htm) and listed six major clinical caries research directions. One of these directions was the need for genetic studies to identify genes and genetic markers of diagnostic, prognostic and therapeutic value. This last decade has seen a steep increase in studies investigating the presence of genetic factors influencing individual susceptibility to caries. This review revisits recent caries human genetic studies and provides a perspective for future studies in order to fulfil their promise of revolutionizing our understanding of and the standard of care for the most prevalent bacteria-mediated non-contagious disease in the world.
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Affiliation(s)
- Alexandre R. Vieira
- Center for Craniofacial and Dental Genetics, Department of Oral Biology School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA
- Department of Pediatric Dentistry, School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA
| | - Adriana Modesto
- Center for Craniofacial and Dental Genetics, Department of Oral Biology School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA
- Department of Pediatric Dentistry, School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA
| | - Mary L. Marazita
- Center for Craniofacial and Dental Genetics, Department of Oral Biology School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA
- Department of Human Genetics, Graduate School of Public Health; Clinical and Translational Science Institute, and Department of Psychiatry, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA
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30
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Park D, Jung JW, Lee MO, Lee SY, Kim B, Jin HJ, Kim J, Ahn YJ, Lee KW, Song YS, Hong S, Womack JE, Kwon HW. Functional characterization of naturally occurring melittin peptide isoforms in two honey bee species, Apis mellifera and Apis cerana. Peptides 2014; 53:185-93. [PMID: 24512991 DOI: 10.1016/j.peptides.2014.01.026] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/28/2013] [Revised: 01/20/2014] [Accepted: 01/21/2014] [Indexed: 12/21/2022]
Abstract
Insect-derived antimicrobial peptides (AMPs) have diverse effects on antimicrobial properties and pharmacological activities such as anti-inflammation and anticancer properties. Naturally occurring genetic polymorphism have a direct and/or indirect influence on pharmacological effect of AMPs, therefore information on single nucleotide polymorphism (SNP) occurring in natural AMPs provides an important clue to therapeutic applications. Here we identified nucleotide polymorphisms in melittin gene of honey bee populations, which is one of the potent AMP in bee venoms. We found that the novel SNP of melittin gene exists in these two honey bee species, Apis mellifera and Apis cerana. Nine polymorphisms were identified within the coding region of the melittin gene, of which one polymorphism that resulted in serine (Ser) to asparagine (Asp) substitution that can potentially effect on biological activities of melittin peptide. Serine-substituted melittin (Mel-S) showed more cytotoxic effect than asparagine-substituted melittin (Mel-N) against E. coli. Also, Mel-N and Mel-S had different inhibitory effects on the production of inflammatory factors such as IL-6 and TNF-α in BV-2 cells. Moreover, Mel-S showed stronger cytotoxic activities than Mel-N peptide against two human ovarian cancer cell lines. Using carbon nanotube-based transistor, we here characterized that Mel-S interacted with small unilamellar liposomes more strongly than Mel-N. Taken together, our present study demonstrates that there exist different characteristics of the gene frequency and the biological activities of the melittin peptide in two honey bee species, Apis mellifera and A. cerana.
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Affiliation(s)
- Doori Park
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea
| | - Je Won Jung
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea
| | - Mi Ok Lee
- Department of Veterinary Pathobiology, Texas A&M University, College Station, TX 77843, United States
| | - Si Young Lee
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea
| | - Boyun Kim
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea
| | - Hye Jun Jin
- Department of Physics and Astronomy, Seoul National University, Seoul 151-747, Republic of Korea
| | - Jiyoung Kim
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea
| | - Young-Joon Ahn
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea
| | - Ki Won Lee
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea
| | - Yong Sang Song
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea
| | - Seunghun Hong
- Department of Physics and Astronomy, Seoul National University, Seoul 151-747, Republic of Korea
| | - James E Womack
- Department of Veterinary Pathobiology, Texas A&M University, College Station, TX 77843, United States
| | - Hyung Wook Kwon
- WCU Biomodulation Major, Department of Agricultural Biotechnology, College of Agriculture & Life Sciences, Seoul National University, Seoul 151-921, Republic of Korea.
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31
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A consortium of Aggregatibacter actinomycetemcomitans, Streptococcus parasanguinis, and Filifactor alocis is present in sites prior to bone loss in a longitudinal study of localized aggressive periodontitis. J Clin Microbiol 2013; 51:2850-61. [PMID: 23784124 DOI: 10.1128/jcm.00729-13] [Citation(s) in RCA: 97] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Aggregatibacter actinomycetemcomitans-induced localized aggressive periodontitis (LAP) in African-American adolescents has been documented but is poorly understood. Two thousand fifty-eight adolescents aged 11 to 17 years were screened for their periodontal status and the presence of A. actinomycetemcomitans in their oral cavity. Seventy-one A. actinomycetemcomitans-negative and 63 A. actinomycetemcomitans-positive periodontally healthy subjects were enrolled, sampled, examined, and radiographed yearly for 3 years. Gingival and periodontal pocket depth and attachment levels were recorded. Disease presentation was characterized by bone loss (BL). Subgingival sites were sampled every 6 months to assess (i) the role of A. actinomycetemcomitans in BL and (ii) the association of A. actinomycetemcomitans and other microbes in their relationships to BL. Sixteen of 63 subjects with A. actinomycetemcomitans developed BL (the other 47 subjects with A. actinomycetemcomitans had no BL). No A. actinomycetemcomitans-negative subjects developed BL. Human oral microbe identification microarray (HOMIM) was used for subgingival microbial assessment. On a subject level, pooled data from A. actinomycetemcomitans-positive subjects who remained healthy had higher prevalences of Streptococcus and Actinomyces species, while A. actinomycetemcomitans-positive subjects with BL had higher prevalences of Parvimonas micra, Filifactor alocis, A. actinomycetemcomitans, and Peptostreptococcus sp. human oral taxon 113 (HOT-113). At vulnerable sites, A. actinomycetemcomitans, Streptococcus parasanguinis, and F. alocis levels were elevated prior to BL. In cases where the three-organism consortium (versus A. actinomycetemcomitans alone) was detected, the specificity for detecting sites of future BL increased from 62% to 99%, with a sensitivity of 89%. We conclude that detecting the presence of A. actinomycetemcomitans, S. parasanguinis, and F. alocis together indicates sites of future BL in LAP. A synergistic interaction of this consortium in LAP causation is possible and is the subject of ongoing research.
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