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For: Radebaugh CA, Matthews JL, Geiss GK, Liu F, Wong JM, Bateman E, Camier S, Sentenac A, Paule MR. TATA box-binding protein (TBP) is a constituent of the polymerase I-specific transcription initiation factor TIF-IB (SL1) bound to the rRNA promoter and shows differential sensitivity to TBP-directed reagents in polymerase I, II, and III transcription factors. Mol Cell Biol 1994;14:597-605. [PMID: 8264628 DOI: 10.1128/mcb.14.1.597-605.1994] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
Number Cited by Other Article(s)
1
Man YN, Sun Y, Chen PJ, Wu H, He ML. TAF1D Functions as a Novel Biomarker in Osteosarcoma. J Cancer 2023;14:2051-2065. [PMID: 37497412 PMCID: PMC10367927 DOI: 10.7150/jca.85688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Accepted: 06/13/2023] [Indexed: 07/28/2023]  Open
2
Parra-Marín O, López-Pacheco K, Hernández R, López-Villaseñor I. The highly diverse TATA box-binding proteins among protists: A review. Mol Biochem Parasitol 2020;239:111312. [PMID: 32771681 DOI: 10.1016/j.molbiopara.2020.111312] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Revised: 06/28/2020] [Accepted: 07/22/2020] [Indexed: 10/23/2022]
3
Pessina F, Giavazzi F, Yin Y, Gioia U, Vitelli V, Galbiati A, Barozzi S, Garre M, Oldani A, Flaus A, Cerbino R, Parazzoli D, Rothenberg E, d'Adda di Fagagna F. Functional transcription promoters at DNA double-strand breaks mediate RNA-driven phase separation of damage-response factors. Nat Cell Biol 2019;21:1286-1299. [PMID: 31570834 PMCID: PMC6859070 DOI: 10.1038/s41556-019-0392-4] [Citation(s) in RCA: 242] [Impact Index Per Article: 40.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2019] [Accepted: 08/16/2019] [Indexed: 12/31/2022]
4
Jackobel AJ, Zeberl BJ, Glover DM, Fakhouri AM, Knutson BA. DNA binding preferences of S. cerevisiae RNA polymerase I Core Factor reveal a preference for the GC-minor groove and a conserved binding mechanism. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 2019;1862:194408. [PMID: 31382053 DOI: 10.1016/j.bbagrm.2019.194408] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2019] [Revised: 07/03/2019] [Accepted: 07/23/2019] [Indexed: 01/24/2023]
5
Jackobel AJ, Han Y, He Y, Knutson BA. Breaking the mold: structures of the RNA polymerase I transcription complex reveal a new path for initiation. Transcription 2018;9:255-261. [PMID: 29264963 PMCID: PMC6104693 DOI: 10.1080/21541264.2017.1416268] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]  Open
6
Zhang Y, Najmi SM, Schneider DA. Transcription factors that influence RNA polymerases I and II: To what extent is mechanism of action conserved? BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 2016;1860:246-255. [PMID: 27989933 DOI: 10.1016/j.bbagrm.2016.10.010] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2016] [Revised: 10/07/2016] [Accepted: 10/25/2016] [Indexed: 01/05/2023]
7
Srivastava A, Bhattacharya A, Bhattacharya S, Jhingan GD. Identification of EhTIF-IA: The putative E. histolytica orthologue of the human ribosomal RNA transcription initiation factor-IA. J Biosci 2016;41:51-62. [PMID: 26949087 DOI: 10.1007/s12038-016-9587-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
8
Regulation of ribosomal RNA production by RNA polymerase I: does elongation come first? GENETICS RESEARCH INTERNATIONAL 2012;2012:276948. [PMID: 22567380 PMCID: PMC3335655 DOI: 10.1155/2012/276948] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2011] [Accepted: 09/27/2011] [Indexed: 11/17/2022]
9
Peng Z, Omaruddin R, Bateman E. Stable transfection of Acanthamoeba castellanii. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2005;1743:93-100. [PMID: 15777844 DOI: 10.1016/j.bbamcr.2004.08.014] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2004] [Revised: 08/23/2004] [Accepted: 08/24/2004] [Indexed: 11/16/2022]
10
Bric A, Radebaugh CA, Paule MR. Photocross-linking of the RNA Polymerase I Preinitiation and Immediate Postinitiation Complexes. J Biol Chem 2004;279:31259-67. [PMID: 15161919 DOI: 10.1074/jbc.m311828200] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
11
Peng Z, Bateman E. Analysis of the 5S rRNA gene promoter from Acanthamoeba castellanii. Mol Microbiol 2004;52:1123-32. [PMID: 15130129 DOI: 10.1111/j.1365-2958.2004.04034.x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
12
Jefferson LS, Vary TC, Kimball SR. Regulation of Protein Metabolism in Muscle. Compr Physiol 2001. [DOI: 10.1002/cphy.cp070216] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
13
Hannan KM, Hannan RD, Smith SD, Jefferson LS, Lun M, Rothblum LI. Rb and p130 regulate RNA polymerase I transcription: Rb disrupts the interaction between UBF and SL-1. Oncogene 2000;19:4988-99. [PMID: 11042686 DOI: 10.1038/sj.onc.1203875] [Citation(s) in RCA: 101] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
14
Kahl BF, Li H, Paule MR. DNA melting and promoter clearance by eukaryotic RNA polymerase I. J Mol Biol 2000;299:75-89. [PMID: 10860723 DOI: 10.1006/jmbi.2000.3743] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
15
Munakata T, Adachi N, Yokoyama N, Kuzuhara T, Horikoshi M. A human homologue of yeast anti-silencing factor has histone chaperone activity. Genes Cells 2000;5:221-33. [PMID: 10759893 DOI: 10.1046/j.1365-2443.2000.00319.x] [Citation(s) in RCA: 105] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
16
Orfeo T, Chen L, Huang W, Ward G, Bateman E. Distamycin A selectively inhibits Acanthamoeba RNA synthesis and differentiation. BIOCHIMICA ET BIOPHYSICA ACTA 1999;1446:273-85. [PMID: 10524202 DOI: 10.1016/s0167-4781(99)00076-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
17
Sastre L. Isolation and characterization of the gene coding for Artemia franciscana TATA-binding protein: expression in cryptobiotic and developing embryos. BIOCHIMICA ET BIOPHYSICA ACTA 1999;1445:271-82. [PMID: 10366711 DOI: 10.1016/s0167-4781(99)00052-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
18
Radebaugh CA, Kubaska WM, Hoffman LH, Stiffler K, Paule MR. A novel transcription initiation factor (TIF), TIF-IE, is required for homogeneous Acanthamoeba castellanii TIF-IB (SL1) to form a committed complex. J Biol Chem 1998;273:27708-15. [PMID: 9765308 DOI: 10.1074/jbc.273.42.27708] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
19
Bateman E. Autoregulation of eukaryotic transcription factors. PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1998;60:133-68. [PMID: 9594574 DOI: 10.1016/s0079-6603(08)60892-2] [Citation(s) in RCA: 48] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
20
Geiss GK, Radebaugh CA, Paule MR. The fundamental ribosomal RNA transcription initiation factor-IB (TIF-IB, SL1, factor D) binds to the rRNA core promoter primarily by minor groove contacts. J Biol Chem 1997;272:29243-54. [PMID: 9361004 DOI: 10.1074/jbc.272.46.29243] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]  Open
21
Park JM, Lee JY, Hatfield DL, Lee BJ. Differential mode of TBP utilization in transcription of the tRNA[Ser]Sec gene and TATA-less class III genes. Gene 1997;196:99-103. [PMID: 9322746 DOI: 10.1016/s0378-1119(97)00211-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
22
Chen L, Guo A, Pape L. An immunoaffinity purified Schizosaccharomyces pombe TBP-containing complex directs correct initiation of the S.pombe rRNA gene promoter. Nucleic Acids Res 1997;25:1633-40. [PMID: 9092673 PMCID: PMC146630 DOI: 10.1093/nar/25.8.1633] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
23
Radebaugh CA, Gong X, Bartholomew B, Paule MR. Identification of previously unrecognized common elements in eukaryotic promoters. A ribosomal RNA gene initiator element for RNA polymerase I. J Biol Chem 1997;272:3141-4. [PMID: 9013545 DOI: 10.1074/jbc.272.6.3141] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]  Open
24
Huang W, Bateman E. Cloning, expression, and characterization of the TATA-binding protein (TBP) promoter binding factor, a transcription activator of the Acanthamoeba TBP gene. J Biol Chem 1995;270:28839-47. [PMID: 7499409 DOI: 10.1074/jbc.270.48.28839] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]  Open
25
Thuriaux P, Mariotte S, Buhler JM, Sentenac A, Vu L, Lee BS, Nomura M. Gene RPA43 in Saccharomyces cerevisiae encodes an essential subunit of RNA polymerase I. J Biol Chem 1995;270:24252-7. [PMID: 7592632 DOI: 10.1074/jbc.270.41.24252] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]  Open
26
Moss T, Stefanovsky VY. Promotion and regulation of ribosomal transcription in eukaryotes by RNA polymerase I. PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1995;50:25-66. [PMID: 7754036 DOI: 10.1016/s0079-6603(08)60810-7] [Citation(s) in RCA: 160] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
27
Niu H, Zhang J, Jacob ST. E1BF/Ku interacts physically and functionally with the core promoter binding factor CPBF and promotes the basal transcription of rat and human ribosomal RNA genes. Gene Expr 1995;4:111-24. [PMID: 7734947 PMCID: PMC6134380] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/1994] [Accepted: 08/16/1994] [Indexed: 01/26/2023]
28
Keys DA, Vu L, Steffan JS, Dodd JA, Yamamoto RT, Nogi Y, Nomura M. RRN6 and RRN7 encode subunits of a multiprotein complex essential for the initiation of rDNA transcription by RNA polymerase I in Saccharomyces cerevisiae. Genes Dev 1994;8:2349-62. [PMID: 7958901 DOI: 10.1101/gad.8.19.2349] [Citation(s) in RCA: 74] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
29
Purification and characterization of TATA-binding protein promoter binding factor. A regulatory transcription factor of the tbp gene. J Biol Chem 1994. [DOI: 10.1016/s0021-9258(17)32343-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
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