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For: Cowley BR, Smith MA, Kohn A, Yu BM. Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex. PLoS Comput Biol 2016;12:e1005185. [PMID: 27935935 DOI: 10.1371/journal.pcbi.1005185] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2015] [Accepted: 10/07/2016] [Indexed: 11/19/2022]  Open
Number Cited by Other Article(s)
1
Çatal Y, Keskin K, Wolman A, Klar P, Smith D, Northoff G. Flexibility of intrinsic neural timescales during distinct behavioral states. Commun Biol 2024;7:1667. [PMID: 39702547 DOI: 10.1038/s42003-024-07349-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2024] [Accepted: 12/02/2024] [Indexed: 12/21/2024]  Open
2
Pavuluri A, Kohn A. The representational geometry for naturalistic textures in macaque V1 and V2. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.10.18.619102. [PMID: 39484570 PMCID: PMC11526966 DOI: 10.1101/2024.10.18.619102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2024]
3
Srinath R, Ni AM, Marucci C, Cohen MR, Brainard DH. Orthogonal neural representations support perceptual judgements of natural stimuli. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.14.580134. [PMID: 38464018 PMCID: PMC10925131 DOI: 10.1101/2024.02.14.580134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/12/2024]
4
Heusser MR, Jagadisan UK, Gandhi NJ. Drifting population dynamics with transient resets characterize sensorimotor transformation in the monkey superior colliculus. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.01.03.522634. [PMID: 36711849 PMCID: PMC9881850 DOI: 10.1101/2023.01.03.522634] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
5
Dabagia M, Kording KP, Dyer EL. Aligning latent representations of neural activity. Nat Biomed Eng 2023;7:337-343. [PMID: 36443379 DOI: 10.1038/s41551-022-00962-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
6
Salners T, Avila KE, Nicholson B, Myers CR, Beggs J, Dahmen KA. Recurrent activity in neuronal avalanches. Sci Rep 2023;13:4871. [PMID: 36964158 PMCID: PMC10039060 DOI: 10.1038/s41598-023-31851-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Accepted: 03/17/2023] [Indexed: 03/26/2023]  Open
7
Avitan L, Stringer C. Not so spontaneous: Multi-dimensional representations of behaviors and context in sensory areas. Neuron 2022;110:3064-3075. [PMID: 35863344 DOI: 10.1016/j.neuron.2022.06.019] [Citation(s) in RCA: 41] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Revised: 06/20/2022] [Accepted: 06/22/2022] [Indexed: 11/27/2022]
8
Dimensionality of the intermediate-level representation of shape and texture in monkey V4. Neural Netw 2022;153:444-449. [DOI: 10.1016/j.neunet.2022.06.027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2021] [Revised: 04/26/2022] [Accepted: 06/22/2022] [Indexed: 11/19/2022]
9
Yu Y, Stirman JN, Dorsett CR, Smith SL. Selective representations of texture and motion in mouse higher visual areas. Curr Biol 2022;32:2810-2820.e5. [PMID: 35609609 DOI: 10.1016/j.cub.2022.04.091] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Revised: 03/22/2022] [Accepted: 04/28/2022] [Indexed: 10/18/2022]
10
Priority coding in the visual system. Nat Rev Neurosci 2022;23:376-388. [DOI: 10.1038/s41583-022-00582-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/14/2022] [Indexed: 01/18/2023]
11
Srinath R, Ruff DA, Cohen MR. Attention improves information flow between neuronal populations without changing the communication subspace. Curr Biol 2021;31:5299-5313.e4. [PMID: 34699782 PMCID: PMC8665027 DOI: 10.1016/j.cub.2021.09.076] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 09/22/2021] [Accepted: 09/28/2021] [Indexed: 10/20/2022]
12
Sokoloski S, Aschner A, Coen-Cagli R. Modelling the neural code in large populations of correlated neurons. eLife 2021;10:64615. [PMID: 34608865 PMCID: PMC8577837 DOI: 10.7554/elife.64615] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Accepted: 10/01/2021] [Indexed: 01/02/2023]  Open
13
Umakantha A, Morina R, Cowley BR, Snyder AC, Smith MA, Yu BM. Bridging neuronal correlations and dimensionality reduction. Neuron 2021;109:2740-2754.e12. [PMID: 34293295 PMCID: PMC8505167 DOI: 10.1016/j.neuron.2021.06.028] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2020] [Revised: 05/05/2021] [Accepted: 06/25/2021] [Indexed: 01/01/2023]
14
Ruff DA, Xue C, Kramer LE, Baqai F, Cohen MR. Low rank mechanisms underlying flexible visual representations. Proc Natl Acad Sci U S A 2020;117:29321-29329. [PMID: 33229536 PMCID: PMC7703603 DOI: 10.1073/pnas.2005797117] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
15
Cowley BR, Snyder AC, Acar K, Williamson RC, Yu BM, Smith MA. Slow Drift of Neural Activity as a Signature of Impulsivity in Macaque Visual and Prefrontal Cortex. Neuron 2020;108:551-567.e8. [PMID: 32810433 PMCID: PMC7822647 DOI: 10.1016/j.neuron.2020.07.021] [Citation(s) in RCA: 64] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 06/15/2020] [Accepted: 07/17/2020] [Indexed: 12/22/2022]
16
Jin C, Chen W, Cao Y, Xu Z, Tan Z, Zhang X, Deng L, Zheng C, Zhou J, Shi H, Feng J. Development and evaluation of an artificial intelligence system for COVID-19 diagnosis. Nat Commun 2020;11:5088. [PMID: 33037212 DOI: 10.1101/823377] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 09/04/2020] [Indexed: 05/22/2023]  Open
17
Kohn A, Jasper AI, Semedo JD, Gokcen E, Machens CK, Yu BM. Principles of Corticocortical Communication: Proposed Schemes and Design Considerations. Trends Neurosci 2020;43:725-737. [PMID: 32771224 PMCID: PMC7484382 DOI: 10.1016/j.tins.2020.07.001] [Citation(s) in RCA: 56] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2020] [Revised: 07/01/2020] [Accepted: 07/05/2020] [Indexed: 12/22/2022]
18
Bartolo R, Saunders RC, Mitz AR, Averbeck BB. Dimensionality, information and learning in prefrontal cortex. PLoS Comput Biol 2020;16:e1007514. [PMID: 32330126 PMCID: PMC7202668 DOI: 10.1371/journal.pcbi.1007514] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Revised: 05/06/2020] [Accepted: 03/11/2020] [Indexed: 01/12/2023]  Open
19
Stabilization of a brain-computer interface via the alignment of low-dimensional spaces of neural activity. Nat Biomed Eng 2020;4:672-685. [PMID: 32313100 DOI: 10.1038/s41551-020-0542-9] [Citation(s) in RCA: 107] [Impact Index Per Article: 21.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Accepted: 02/21/2020] [Indexed: 12/31/2022]
20
Whiteway MR, Butts DA. The quest for interpretable models of neural population activity. Curr Opin Neurobiol 2019;58:86-93. [PMID: 31426024 DOI: 10.1016/j.conb.2019.07.004] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2018] [Accepted: 07/14/2019] [Indexed: 11/24/2022]
21
Stringer C, Pachitariu M, Steinmetz N, Carandini M, Harris KD. High-dimensional geometry of population responses in visual cortex. Nature 2019;571:361-365. [PMID: 31243367 PMCID: PMC6642054 DOI: 10.1038/s41586-019-1346-5] [Citation(s) in RCA: 279] [Impact Index Per Article: 46.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 05/29/2019] [Indexed: 01/13/2023]
22
Tripp B. Approximating the Architecture of Visual Cortex in a Convolutional Network. Neural Comput 2019;31:1551-1591. [PMID: 31260392 DOI: 10.1162/neco_a_01211] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
23
Trautmann EM, Stavisky SD, Lahiri S, Ames KC, Kaufman MT, O'Shea DJ, Vyas S, Sun X, Ryu SI, Ganguli S, Shenoy KV. Accurate Estimation of Neural Population Dynamics without Spike Sorting. Neuron 2019;103:292-308.e4. [PMID: 31171448 DOI: 10.1016/j.neuron.2019.05.003] [Citation(s) in RCA: 149] [Impact Index Per Article: 24.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2017] [Revised: 02/06/2019] [Accepted: 04/30/2019] [Indexed: 11/25/2022]
24
Beyeler M, Rounds EL, Carlson KD, Dutt N, Krichmar JL. Neural correlates of sparse coding and dimensionality reduction. PLoS Comput Biol 2019;15:e1006908. [PMID: 31246948 PMCID: PMC6597036 DOI: 10.1371/journal.pcbi.1006908] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
25
High-dimensional representation of texture in somatosensory cortex of primates. Proc Natl Acad Sci U S A 2019;116:3268-3277. [PMID: 30718436 PMCID: PMC6386651 DOI: 10.1073/pnas.1818501116] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
26
Williamson RC, Doiron B, Smith MA, Yu BM. Bridging large-scale neuronal recordings and large-scale network models using dimensionality reduction. Curr Opin Neurobiol 2019;55:40-47. [PMID: 30677702 DOI: 10.1016/j.conb.2018.12.009] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2018] [Revised: 12/16/2018] [Accepted: 12/17/2018] [Indexed: 12/21/2022]
27
Kaplan HS, Nichols ALA, Zimmer M. Sensorimotor integration in Caenorhabditis elegans: a reappraisal towards dynamic and distributed computations. Philos Trans R Soc Lond B Biol Sci 2018;373:20170371. [PMID: 30201836 PMCID: PMC6158224 DOI: 10.1098/rstb.2017.0371] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/18/2018] [Indexed: 12/03/2022]  Open
28
Adjusted regularization of cortical covariance. J Comput Neurosci 2018;45:83-101. [PMID: 30191352 DOI: 10.1007/s10827-018-0692-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2017] [Revised: 07/13/2018] [Accepted: 07/30/2018] [Indexed: 12/31/2022]
29
Frégnac Y. Big data and the industrialization of neuroscience: A safe roadmap for understanding the brain? Science 2018;358:470-477. [PMID: 29074766 DOI: 10.1126/science.aan8866] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
30
Gallego JA, Perich MG, Miller LE, Solla SA. Neural Manifolds for the Control of Movement. Neuron 2017;94:978-984. [PMID: 28595054 DOI: 10.1016/j.neuron.2017.05.025] [Citation(s) in RCA: 327] [Impact Index Per Article: 40.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2016] [Revised: 05/11/2017] [Accepted: 05/18/2017] [Indexed: 10/19/2022]
31
Jancke D. Catching the voltage gradient-asymmetric boost of cortical spread generates motion signals across visual cortex: a brief review with special thanks to Amiram Grinvald. NEUROPHOTONICS 2017;4:031206. [PMID: 28217713 PMCID: PMC5301132 DOI: 10.1117/1.nph.4.3.031206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Accepted: 01/12/2017] [Indexed: 06/06/2023]
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