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For: Dudbridge F. Power and predictive accuracy of polygenic risk scores. PLoS Genet 2013;9:e1003348. [PMID: 23555274 PMCID: PMC3605113 DOI: 10.1371/journal.pgen.1003348] [Citation(s) in RCA: 989] [Impact Index Per Article: 82.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2012] [Accepted: 01/16/2013] [Indexed: 12/12/2022]  Open
Number Cited by Other Article(s)
1
Fujita K, Kimura T, Yamakawa A, Niida S, Ozaki K, Sakurai T, Arai H, Shigemizu D, J-MINT study group. Genetic background and multidomain interventions in mild cognitive impairment. Alzheimers Res Ther 2025;17:130. [PMID: 40490801 DOI: 10.1186/s13195-025-01764-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2024] [Accepted: 05/13/2025] [Indexed: 06/11/2025]
2
Sanghvi MM, Young WJ, Naderi H, Burns R, Ramírez J, Bell CG, Munroe PB. Using Genomics to Develop Personalized Cardiovascular Treatments. Arterioscler Thromb Vasc Biol 2025;45:866-881. [PMID: 40244646 DOI: 10.1161/atvbaha.125.319221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2025] [Accepted: 04/07/2025] [Indexed: 04/18/2025]
3
Miao J, Song G, Wu Y, Hu J, Wu Y, Basu S, Andrews JS, Schaumberg K, Fletcher JM, Schmitz LL, Lu Q. PIGEON: a statistical framework for estimating gene-environment interaction for polygenic traits. Nat Hum Behav 2025:10.1038/s41562-025-02202-9. [PMID: 40410536 DOI: 10.1038/s41562-025-02202-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Accepted: 04/02/2025] [Indexed: 05/25/2025]
4
Kaishima M, Ito J, Takahashi K, Tai K, Kuromitsu J, Bun S, Ito D. Development of a Japanese polygenic risk score model for amyloid-β PET imaging in Alzheimer's disease. Alzheimers Res Ther 2025;17:112. [PMID: 40405310 PMCID: PMC12096521 DOI: 10.1186/s13195-025-01754-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2025] [Accepted: 05/03/2025] [Indexed: 05/24/2025]
5
Seo J, Kim G, Park S, Lee A, Liang L, Park T, Chung W. Assessing the causal effects of type 2 diabetes and obesity-related traits on COVID-19 severity. Hum Genomics 2025;19:43. [PMID: 40264243 PMCID: PMC12016339 DOI: 10.1186/s40246-025-00747-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2025] [Accepted: 03/24/2025] [Indexed: 04/24/2025]  Open
6
Rami FZ, Seo H, Kang C, Park S, Li L, Le TH, Kim SW, Won SH, Chung W, Chung YC. Associations of polygenic risk score, environmental factors, and their interactions with the risk of schizophrenia spectrum disorders. Psychol Med 2025;55:e111. [PMID: 40211091 DOI: 10.1017/s0033291725000753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 04/12/2025]
7
Orri M, Morneau-Vaillancourt G, Ouellet-Morin I, Cortese S, Galera C, Voronin I, Vitaro F, Brendgen MR, Dionne G, Paquin S, Forte A, Turecki G, Tremblay RE, Côté SM, Geoffroy MC, Boivin M. Joint contribution of polygenic scores for depression and attention-deficit/hyperactivity disorder to youth suicidal ideation and attempt. Mol Psychiatry 2025:10.1038/s41380-025-02989-z. [PMID: 40185901 DOI: 10.1038/s41380-025-02989-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Revised: 03/14/2025] [Accepted: 03/25/2025] [Indexed: 04/07/2025]
8
Ottensmann L, Tabassum R, Ruotsalainen SE, Gerl MJ, Klose C, McCartney DL, Widén E, Simons K, Ripatti S, Vitart V, Hayward C, Pirinen M. Examining the link between 179 lipid species and 7 diseases using genetic predictors. EBioMedicine 2025;114:105671. [PMID: 40157129 PMCID: PMC11995710 DOI: 10.1016/j.ebiom.2025.105671] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2024] [Revised: 03/12/2025] [Accepted: 03/13/2025] [Indexed: 04/01/2025]  Open
9
Goulet D, Boivin M, Gravel C, Little J, Ouellet-Morin I, Gouin JP, Dubois L. Polygenic scores of obesity in childhood based on summary statistics from adults versus children. Can J Physiol Pharmacol 2025. [PMID: 40132211 DOI: 10.1139/cjpp-2024-0221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/27/2025]
10
Uffelmann E, Price AL, Posthuma D, Peyrot WJ. Estimating Disorder Probability Based on Polygenic Prediction Using the BPC Approach. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2025:2024.01.12.24301157. [PMID: 38260678 PMCID: PMC10802765 DOI: 10.1101/2024.01.12.24301157] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
11
Liu Y, Hou W, Gao T, Yan Y, Wang T, Zheng C, Zeng P. Influence and role of polygenic risk score in the development of 32 complex diseases. J Glob Health 2025;15:04071. [PMID: 40063714 PMCID: PMC11893022 DOI: 10.7189/jogh.15.04071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/14/2025]  Open
12
Jiang Y, Zhang H. Empowering genome-wide association studies via a visualizable test based on the regional association score. Proc Natl Acad Sci U S A 2025;122:e2419721122. [PMID: 39999171 PMCID: PMC11892588 DOI: 10.1073/pnas.2419721122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2024] [Accepted: 01/21/2025] [Indexed: 02/27/2025]  Open
13
Zhou Q, Liao W, Allegrini AG, Rimfeld K, Wertz J, Morris T, Raffington L, Plomin R, Malanchini M. From genetic disposition to academic achievement: The mediating role of non-cognitive skills across development. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.02.27.640510. [PMID: 40060469 PMCID: PMC11888423 DOI: 10.1101/2025.02.27.640510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 03/15/2025]
14
Xu B, Forthman KL, Kuplicki R, Ahern J, Loughnan R, Naber F, Thompson WK, Nemeroff CB, Paulus MP, Fan CC. Genetic Correlates of Treatment-Resistant Depression. JAMA Psychiatry 2025:2830400. [PMID: 40009368 PMCID: PMC11866074 DOI: 10.1001/jamapsychiatry.2024.4825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Accepted: 12/03/2024] [Indexed: 02/27/2025]
15
Patel PC. Look before you leap: Earnings gaps and elderly self-employment. JOURNAL OF BUSINESS RESEARCH 2025;189:115081. [DOI: 10.1016/j.jbusres.2024.115081] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2025]
16
Reed ZE, Thomas R, Boyd A, Griffith GJ, Morris TT, Rai D, Manley D, Davey Smith G, Davis OS. Mapping associations of polygenic scores with autistic and ADHD traits in a single city region. J Child Psychol Psychiatry 2025;66:202-213. [PMID: 39143033 PMCID: PMC7616875 DOI: 10.1111/jcpp.14047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 06/10/2024] [Indexed: 08/16/2024]
17
Zavlis O, Parsons S, Fox E, Booth C, Songco A, Vincent JP. The effects of life experiences and polygenic risk for depression on the development of positive and negative cognitive biases across adolescence: The CogBIAS hypothesis. Dev Psychopathol 2025;37:361-370. [PMID: 38247376 DOI: 10.1017/s0954579423001645] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2024]
18
Ngo A, Liu L, Larivière S, Kebets V, Fett S, Weber CF, Royer J, Yu E, Rodríguez-Cruces R, Zhang Z, Ooi LQR, Thomas Yeo BT, Frauscher B, Paquola C, Caligiuri ME, Gambardella A, Concha L, Keller SS, Cendes F, Yasuda CL, Bonilha L, Gleichgerrcht E, Focke NK, Kotikalapudi R, O’Brien TJ, Sinclair B, Vivash L, Desmond PM, Lui E, Vaudano AE, Meletti S, Kälviäinen R, Soltanian-Zadeh H, Winston GP, Tiwari VK, Kreilkamp BAK, Lenge M, Guerrini R, Hamandi K, Rüber T, Bauer T, Devinsky O, Striano P, Kaestner E, Hatton SN, Caciagli L, Kirschner M, Duncan JS, Thompson PM, ENIGMA Consortium Epilepsy Working Group, McDonald CR, Sisodiya SM, Bernasconi N, Bernasconi A, Gan-Or Z, Bernhardt BC. ASSOCIATIONS BETWEEN EPILEPSY-RELATED POLYGENIC RISK AND BRAIN MORPHOLOGY IN CHILDHOOD. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.01.17.633277. [PMID: 39868179 PMCID: PMC11760683 DOI: 10.1101/2025.01.17.633277] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 01/28/2025]
19
Canchi Sistla H, Talluri S, Rajagopal T, Venkatabalasubramanian S, Rao Dunna N. Genomic instability in ovarian cancer: Through the lens of single nucleotide polymorphisms. Clin Chim Acta 2025;565:119992. [PMID: 39395774 DOI: 10.1016/j.cca.2024.119992] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2024] [Revised: 10/04/2024] [Accepted: 10/04/2024] [Indexed: 10/14/2024]
20
Barr PB, Neale Z, Chatzinakos C, Schulman J, Mullins N, Zhang J, Chorlian DB, Kamarajan C, Kinreich S, Pandey AK, Pandey G, Saenz de Viteri S, Acion L, Bauer L, Bucholz KK, Chan G, Dick DM, Edenberg HJ, Foroud T, Goate A, Hesselbrock V, Johnson EC, Kramer JR, Lai D, Plawecki MH, Salvatore J, Wetherill L, Agrawal A, Porjesz B, Meyers JL. Clinical, Genomic, and Neurophysiological Correlates of Lifetime Suicide Attempts among Individuals with an Alcohol Use Disorder. Complex Psychiatry 2025;11:1-11. [PMID: 40061584 PMCID: PMC11888779 DOI: 10.1159/000543222] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2024] [Accepted: 12/06/2024] [Indexed: 03/19/2025]  Open
21
van der Es T, Soheili-Nezhad S, Roth Mota N, Franke B, Buitelaar J, Sprooten E. Exploring the genetic architecture of brain structure and ADHD using polygenic neuroimaging-derived scores. Am J Med Genet B Neuropsychiatr Genet 2025;198:e32987. [PMID: 39016115 DOI: 10.1002/ajmg.b.32987] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 04/24/2024] [Accepted: 05/11/2024] [Indexed: 07/18/2024]
22
Kim J, Park YS, Kim JH, Hong YC, Kim YC, Oh IJ, Jee SH, Ahn MJ, Kim JW, Yim JJ, Won S. Predicting Lung Cancer in Korean Never-Smokers With Polygenic Risk Scores. Genet Epidemiol 2025;49:e22586. [PMID: 39311016 DOI: 10.1002/gepi.22586] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Revised: 04/02/2024] [Accepted: 09/03/2024] [Indexed: 12/20/2024]
23
Rosoff DB, Wagner J, Bell AS, Mavromatis LA, Jung J, Lohoff FW. A multi-omics Mendelian randomization study identifies new therapeutic targets for alcohol use disorder and problem drinking. Nat Hum Behav 2025;9:188-207. [PMID: 39528761 DOI: 10.1038/s41562-024-02040-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Accepted: 10/01/2024] [Indexed: 11/16/2024]
24
Nostaeva A, Shimansky V, Apalko S, Kuznetsov I, Sushentseva N, Popov O, Asinovskaya A, Mosenko S, Karssen L, Sarana A, Aulchenko Y, Shcherbak S. Case-control association study between polygenic risk score and COVID-19 severity in a Russian population using low-pass genome sequencing. Epidemiol Infect 2024;153:e13. [PMID: 39721951 PMCID: PMC11748017 DOI: 10.1017/s0950268824001778] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Revised: 10/01/2024] [Accepted: 12/04/2024] [Indexed: 12/28/2024]  Open
25
Rodriguez V, Alameda L, Aas M, Gayer-Anderson C, Trotta G, Spinazzola E, Quattrone D, Tripoli G, Jongsma HE, Stilo S, La Cascia C, Ferraro L, La Barbera D, Lasalvia A, Tosato S, Tarricone I, Bonora E, Jamain S, Selten JP, Velthorst E, de Haan L, Llorca PM, Arrojo M, Bobes J, Bernardo M, Arango C, Kirkbride J, Jones PB, Rutten BP, Richards A, Sham PC, O'Donovan M, Van Os J, Morgan C, Di Forti M, Murray RM, Vassos E. Polygenic and Polyenvironment Interplay in Schizophrenia-Spectrum Disorder and Affective Psychosis; the EUGEI First Episode Study. Schizophr Bull 2024:sbae207. [PMID: 39658350 DOI: 10.1093/schbul/sbae207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/12/2024]
26
Johnson R, Gottlieb U, Shaham G, Eisen L, Waxman J, Devons-Sberro S, Ginder CR, Hong P, Sayeed R, Reis BY, Balicer RD, Dagan N, Zitnik M. Unified Clinical Vocabulary Embeddings for Advancing Precision Medicine. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2024:2024.12.03.24318322. [PMID: 39677476 PMCID: PMC11643188 DOI: 10.1101/2024.12.03.24318322] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 12/17/2024]
27
Jayasinghe D, Eshetie S, Beckmann K, Benyamin B, Lee SH. Advancements and limitations in polygenic risk score methods for genomic prediction: a scoping review. Hum Genet 2024;143:1401-1431. [PMID: 39542907 DOI: 10.1007/s00439-024-02716-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2024] [Accepted: 10/31/2024] [Indexed: 11/17/2024]
28
Piedade AP, Butler J, Eyre S, Orozco G. The importance of functional genomics studies in precision rheumatology. Best Pract Res Clin Rheumatol 2024;38:101988. [PMID: 39174375 DOI: 10.1016/j.berh.2024.101988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Revised: 08/04/2024] [Accepted: 08/07/2024] [Indexed: 08/24/2024]
29
Sanz-Martín G, Migliore DP, Gómez del Campo P, del Castillo-Izquierdo J, Domínguez JM. GFPrint™: A machine learning tool for transforming genetic data into clinical insights. PLoS One 2024;19:e0311370. [PMID: 39602407 PMCID: PMC11602062 DOI: 10.1371/journal.pone.0311370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 09/15/2024] [Indexed: 11/29/2024]  Open
30
Li Y, Xie T, Vos M, Snieder H, Hartman CA. Shared genetic architecture and causality between autism spectrum disorder and irritable bowel syndrome, multisite pain, and fatigue. Transl Psychiatry 2024;14:476. [PMID: 39580447 PMCID: PMC11585586 DOI: 10.1038/s41398-024-03184-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Revised: 11/06/2024] [Accepted: 11/12/2024] [Indexed: 11/25/2024]  Open
31
Kidenya BR, Mboowa G. Inclusiveness of the All of Us Research Program improves polygenic risk scores and fosters genomic medicine for all. COMMUNICATIONS MEDICINE 2024;4:227. [PMID: 39511400 PMCID: PMC11544250 DOI: 10.1038/s43856-024-00647-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Accepted: 10/15/2024] [Indexed: 11/15/2024]  Open
32
Packer A, Habiballa L, Tato-Barcia E, Breen G, Brooker H, Corbett A, Arathimos R, Ballard C, Hampshire A, Palmer A, Dima D, Aarsland D, Creese B, Malanchini M, Powell TR. Telomere length and cognitive changes in 7,877 older UK adults of European ancestry. FRONTIERS IN AGING 2024;5:1480326. [PMID: 39553389 PMCID: PMC11564160 DOI: 10.3389/fragi.2024.1480326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Accepted: 10/01/2024] [Indexed: 11/19/2024]
33
Tovo-Rodrigues L, Camerini L, Martins-Silva T, Carpena MX, Bonilla C, Oliveira IO, de Paula CS, Murray J, Barros AJD, Santos IS, Rohde LA, Hutz MH, Genro JP, Matijasevich A. Gene - maltreatment interplay in adult ADHD symptoms: main role of a gene-environment correlation effect in a Brazilian population longitudinal study. Mol Psychiatry 2024;29:3412-3421. [PMID: 38744991 DOI: 10.1038/s41380-024-02589-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 04/29/2024] [Accepted: 05/01/2024] [Indexed: 05/16/2024]
34
Ndong Sima CAA, Step K, Swart Y, Schurz H, Uren C, Möller M. Methodologies underpinning polygenic risk scores estimation: a comprehensive overview. Hum Genet 2024;143:1265-1280. [PMID: 39425790 PMCID: PMC11522080 DOI: 10.1007/s00439-024-02710-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Accepted: 10/06/2024] [Indexed: 10/21/2024]
35
Li B, Li X, Liu J, Gao Y, Li Y. Immunocyte phenotype and breast cancer risk: A Mendel randomization analysis. PLoS One 2024;19:e0311172. [PMID: 39418291 PMCID: PMC11486363 DOI: 10.1371/journal.pone.0311172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Accepted: 09/14/2024] [Indexed: 10/19/2024]  Open
36
Nakase T, Guerra GA, Ostrom QT, Ge T, Melin BS, Wrensch M, Wiencke JK, Jenkins RB, Eckel-Passow JE, Glioma International Case-Control Study (GICC), Bondy ML, Francis SS, Kachuri L. Genome-wide polygenic risk scores predict risk of glioma and molecular subtypes. Neuro Oncol 2024;26:1933-1944. [PMID: 38916140 PMCID: PMC11448969 DOI: 10.1093/neuonc/noae112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Indexed: 06/26/2024]  Open
37
Gaggero A, Ajnakina O, Zucchelli E, Hackett RA. The effect of heavy smoking on retirement risk: A mendelian randomisation analysis. Addict Behav 2024;157:108078. [PMID: 38889551 DOI: 10.1016/j.addbeh.2024.108078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Revised: 05/30/2024] [Accepted: 06/01/2024] [Indexed: 06/20/2024]
38
Pain O, Al-Chalabi A, Lewis CM. The GenoPred pipeline: a comprehensive and scalable pipeline for polygenic scoring. Bioinformatics 2024;40:btae551. [PMID: 39292536 PMCID: PMC11462442 DOI: 10.1093/bioinformatics/btae551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2024] [Revised: 08/29/2024] [Accepted: 09/17/2024] [Indexed: 09/20/2024]  Open
39
Capalbo A, de Wert G, Mertes H, Klausner L, Coonen E, Spinella F, Van de Velde H, Viville S, Sermon K, Vermeulen N, Lencz T, Carmi S. Screening embryos for polygenic disease risk: a review of epidemiological, clinical, and ethical considerations. Hum Reprod Update 2024;30:529-557. [PMID: 38805697 PMCID: PMC11369226 DOI: 10.1093/humupd/dmae012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 03/25/2024] [Indexed: 05/30/2024]  Open
40
Amiri Roudbar M, Vahedi SM, Jin J, Jahangiri M, Lanjanian H, Habibi D, Masjoudi S, Riahi P, Fateh ST, Neshati F, Zahedi AS, Moazzam-Jazi M, Najd-Hassan-Bonab L, Mousavi SF, Asgarian S, Zarkesh M, Moghaddas MR, Tenesa A, Kazemnejad A, Vahidnezhad H, Hakonarson H, Azizi F, Hedayati M, Daneshpour MS, Akbarzadeh M. The effect of family structure on the still-missing heritability and genomic prediction accuracy of type 2 diabetes. Hum Genomics 2024;18:98. [PMID: 39256828 PMCID: PMC11389528 DOI: 10.1186/s40246-024-00669-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2024] [Accepted: 08/26/2024] [Indexed: 09/12/2024]  Open
41
Adhisantoso YG, Körner T, Müntefering F, Ostermann J, Voges J. HiCMC: High-Efficiency Contact Matrix Compressor. BMC Bioinformatics 2024;25:296. [PMID: 39256681 PMCID: PMC11389233 DOI: 10.1186/s12859-024-05907-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2024] [Accepted: 08/20/2024] [Indexed: 09/12/2024]  Open
42
Smith K, Climer S. Capturing biomarkers associated with Alzheimer disease subtypes using data distribution characteristics. Front Comput Neurosci 2024;18:1388504. [PMID: 39309755 PMCID: PMC11413970 DOI: 10.3389/fncom.2024.1388504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Accepted: 08/20/2024] [Indexed: 09/25/2024]  Open
43
Pelt DHM, Habets PC, Vinkers CH, Ligthart L, van Beijsterveldt CEM, Pool R, Bartels M. Building machine learning prediction models for well-being using predictors from the exposome and genome in a population cohort. NATURE. MENTAL HEALTH 2024;2:1217-1230. [PMID: 39464304 PMCID: PMC11511667 DOI: 10.1038/s44220-024-00294-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 07/11/2024] [Indexed: 10/29/2024]
44
Cho HW, Jin HS, Kim SS, Eom YB. Forensic height estimation using polygenic score in Korean population. Mol Genet Genomics 2024;299:78. [PMID: 39120737 DOI: 10.1007/s00438-024-02172-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 07/30/2024] [Indexed: 08/10/2024]
45
Sharew NT, Clark SR, Schubert KO, Amare AT. Pharmacogenomic scores in psychiatry: systematic review of current evidence. Transl Psychiatry 2024;14:322. [PMID: 39107294 PMCID: PMC11303815 DOI: 10.1038/s41398-024-02998-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Revised: 06/21/2024] [Accepted: 06/27/2024] [Indexed: 08/10/2024]  Open
46
Yang X, Wang Z, Li H, Qin W, Liu N, Liu Z, Wang S, Xu J, Wang J, for the Alzheimer's Disease Neuroimaging Initiative. Polygenic Score for Conscientiousness Is a Protective Factor for Reversion from Mild Cognitive Impairment to Normal Cognition. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024;11:e2309889. [PMID: 38838096 PMCID: PMC11304237 DOI: 10.1002/advs.202309889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Revised: 05/21/2024] [Indexed: 06/07/2024]
47
Burt CH. Polygenic Indices (a.k.a. Polygenic Scores) in Social Science: A Guide for Interpretation and Evaluation. SOCIOLOGICAL METHODOLOGY 2024;54:300-350. [PMID: 39091537 PMCID: PMC11293310 DOI: 10.1177/00811750241236482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/04/2024]
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Heerkens L, Geleijnse JM, van Duijnhoven FJB. Dietary and genetic determinants of non-alcoholic fatty liver disease in coronary heart disease patients. Eur J Nutr 2024;63:1847-1856. [PMID: 38864867 PMCID: PMC11329394 DOI: 10.1007/s00394-024-03431-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Accepted: 03/29/2024] [Indexed: 06/13/2024]
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Lankester J, Guarischi-Sousa R, Hilliard AT, Shere L, Husary M, Crowe S, Tsao PS, Rehkopf DH, Assimes TL. Increased BMI associated with decreased breastfeeding initiation in Million Veteran Program participants. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2024:2024.07.02.24309047. [PMID: 39006437 PMCID: PMC11245076 DOI: 10.1101/2024.07.02.24309047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/16/2024]
50
Yang X, Sullivan PF, Li B, Fan Z, Ding D, Shu J, Guo Y, Paschou P, Bao J, Shen L, Ritchie MD, Nave G, Platt ML, Li T, Zhu H, Zhao B. Multi-organ imaging-derived polygenic indexes for brain and body health. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2024:2023.04.18.23288769. [PMID: 38883759 PMCID: PMC11177904 DOI: 10.1101/2023.04.18.23288769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2024]
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