• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (5081219)   Today's Articles (1159)
For: Coelho MA, Gonçalves C, Sampaio JP, Gonçalves P. Extensive intra-kingdom horizontal gene transfer converging on a fungal fructose transporter gene. PLoS Genet 2013;9:e1003587. [PMID: 23818872 PMCID: PMC3688497 DOI: 10.1371/journal.pgen.1003587] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2012] [Accepted: 05/08/2013] [Indexed: 11/19/2022]  Open
Number Cited by Other Article(s)
1
Kortekaas Krohn I, Callewaert C, Belasri H, De Pessemier B, Diez Lopez C, Mortz CG, O'Mahony L, Pérez-Gordo M, Sokolowska M, Unger Z, Untersmayr E, Homey B, Gomez-Casado C. The influence of lifestyle and environmental factors on host resilience through a homeostatic skin microbiota: An EAACI Task Force Report. Allergy 2024;79:3269-3284. [PMID: 39485000 DOI: 10.1111/all.16378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2024] [Revised: 10/08/2024] [Accepted: 10/22/2024] [Indexed: 11/03/2024]
2
Bjornson S, Verbruggen H, Upham NS, Steenwyk JL. Reticulate evolution: Detection and utility in the phylogenomics era. Mol Phylogenet Evol 2024;201:108197. [PMID: 39270765 DOI: 10.1016/j.ympev.2024.108197] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2024] [Revised: 08/13/2024] [Accepted: 09/08/2024] [Indexed: 09/15/2024]
3
Gänzle MG, Monnin L, Zheng J, Zhang L, Coton M, Sicard D, Walter J. Starter Culture Development and Innovation for Novel Fermented Foods. Annu Rev Food Sci Technol 2024;15:211-239. [PMID: 38052450 DOI: 10.1146/annurev-food-072023-034207] [Citation(s) in RCA: 13] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
4
González Flores M, Origone AC, Rodríguez ME, Lopes CA. Nonconventional yeasts and hybrids for low temperature handcrafted sparkling ciders elaboration in Patagonia. Int J Food Microbiol 2024;412:110566. [PMID: 38241754 DOI: 10.1016/j.ijfoodmicro.2024.110566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Revised: 12/22/2023] [Accepted: 01/03/2024] [Indexed: 01/21/2024]
5
Donzella L, Sousa MJ, Morrissey JP. Evolution and functional diversification of yeast sugar transporters. Essays Biochem 2023;67:811-827. [PMID: 36928992 PMCID: PMC10500205 DOI: 10.1042/ebc20220233] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Revised: 03/07/2023] [Accepted: 03/09/2023] [Indexed: 03/18/2023]
6
Tapia SM, Macías LG, Pérez-Torrado R, Daroqui N, Manzanares P, Querol A, Barrio E. A novel aminotransferase gene and its regulator acquired in Saccharomyces by a horizontal gene transfer event. BMC Biol 2023;21:102. [PMID: 37158891 PMCID: PMC10169451 DOI: 10.1186/s12915-023-01566-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Accepted: 03/16/2023] [Indexed: 05/10/2023]  Open
7
Densi A, Iyer RS, Bhat PJ. Synonymous and Nonsynonymous Substitutions in Dictyostelium discoideum Ammonium Transporter amtA Are Necessary for Functional Complementation in Saccharomyces cerevisiae. Microbiol Spectr 2023;11:e0384722. [PMID: 36840598 PMCID: PMC10100761 DOI: 10.1128/spectrum.03847-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Accepted: 01/24/2023] [Indexed: 02/24/2023]  Open
8
Gonçalves P, Gonçalves C. Horizontal gene transfer in yeasts. Curr Opin Genet Dev 2022;76:101950. [PMID: 35841879 DOI: 10.1016/j.gde.2022.101950] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Revised: 06/01/2022] [Accepted: 06/12/2022] [Indexed: 11/29/2022]
9
Contrasting Strategies for Sucrose Utilization in a Floral Yeast Clade. mSphere 2022;7:e0003522. [PMID: 35354279 PMCID: PMC9044934 DOI: 10.1128/msphere.00035-22] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
10
Havukainen S, Pujol-Giménez J, Valkonen M, Westerholm-Parvinen A, Hediger MA, Landowski CP. Electrophysiological characterization of a diverse group of sugar transporters from Trichoderma reesei. Sci Rep 2021;11:14678. [PMID: 34282161 PMCID: PMC8290022 DOI: 10.1038/s41598-021-93552-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Accepted: 06/21/2021] [Indexed: 02/06/2023]  Open
11
Peterson D, Li T, Calvo AM, Yin Y. Categorization of Orthologous Gene Clusters in 92 Ascomycota Genomes Reveals Functions Important for Phytopathogenicity. J Fungi (Basel) 2021;7:337. [PMID: 33925458 PMCID: PMC8146833 DOI: 10.3390/jof7050337] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 04/23/2021] [Accepted: 04/24/2021] [Indexed: 01/01/2023]  Open
12
Datamining and functional environmental genomics reassess the phylogenetics and functional diversity of fungal monosaccharide transporters. Appl Microbiol Biotechnol 2021;105:647-660. [PMID: 33394157 DOI: 10.1007/s00253-020-11076-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Revised: 12/14/2020] [Accepted: 12/23/2020] [Indexed: 10/22/2022]
13
da Silva JM, da Silva GHTG, Parente DC, Leite FCB, Silva CS, Valente P, Ganga AM, Simões DA, de Morais MA. Biological diversity of carbon assimilation among isolates of the yeast Dekkera bruxellensis from wine and fuel-ethanol industrial processes. FEMS Yeast Res 2019;19:5372417. [PMID: 30848782 DOI: 10.1093/femsyr/foz022] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Accepted: 03/07/2019] [Indexed: 12/11/2022]  Open
14
Patiño MA, Ortiz JP, Velásquez M, Stambuk BU. d-Xylose consumption by nonrecombinant Saccharomyces cerevisiae: A review. Yeast 2019;36:541-556. [PMID: 31254359 DOI: 10.1002/yea.3429] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2019] [Revised: 06/02/2019] [Accepted: 06/21/2019] [Indexed: 01/24/2023]  Open
15
Zhao JH, Guo HS. Trans-kingdom RNA interactions drive the evolutionary arms race between hosts and pathogens. Curr Opin Genet Dev 2019;58-59:62-69. [PMID: 31472442 DOI: 10.1016/j.gde.2019.07.019] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Revised: 07/23/2019] [Accepted: 07/30/2019] [Indexed: 12/12/2022]
16
Savory FR, Milner DS, Miles DC, Richards TA. Ancestral Function and Diversification of a Horizontally Acquired Oomycete Carboxylic Acid Transporter. Mol Biol Evol 2019;35:1887-1900. [PMID: 29701800 PMCID: PMC6063262 DOI: 10.1093/molbev/msy082] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
17
Environment-dependent fitness gains can be driven by horizontal gene transfer of transporter-encoding genes. Proc Natl Acad Sci U S A 2019;116:5613-5622. [PMID: 30842288 PMCID: PMC6431176 DOI: 10.1073/pnas.1815994116] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
18
Feurtey A, Stukenbrock EH. Interspecific Gene Exchange as a Driver of Adaptive Evolution in Fungi. Annu Rev Microbiol 2018;72:377-398. [DOI: 10.1146/annurev-micro-090817-062753] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
19
A Growth-Based Screening System for Hexose Transporters in Yeast. Methods Mol Biol 2018. [PMID: 29218522 DOI: 10.1007/978-1-4939-7507-5_10] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
20
Gonçalves C, Wisecaver JH, Kominek J, Oom MS, Leandro MJ, Shen XX, Opulente DA, Zhou X, Peris D, Kurtzman CP, Hittinger CT, Rokas A, Gonçalves P. Evidence for loss and reacquisition of alcoholic fermentation in a fructophilic yeast lineage. eLife 2018;7:33034. [PMID: 29648535 PMCID: PMC5897096 DOI: 10.7554/elife.33034] [Citation(s) in RCA: 59] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2017] [Accepted: 02/27/2018] [Indexed: 11/13/2022]  Open
21
Coelho MA, Bakkeren G, Sun S, Hood ME, Giraud T. Fungal Sex: The Basidiomycota. Microbiol Spectr 2017;5:10.1128/microbiolspec.funk-0046-2016. [PMID: 28597825 PMCID: PMC5467461 DOI: 10.1128/microbiolspec.funk-0046-2016] [Citation(s) in RCA: 62] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2016] [Indexed: 12/29/2022]  Open
22
Lazar Z, Neuvéglise C, Rossignol T, Devillers H, Morin N, Robak M, Nicaud JM, Crutz-Le Coq AM. Characterization of hexose transporters in Yarrowia lipolytica reveals new groups of Sugar Porters involved in yeast growth. Fungal Genet Biol 2017;100:1-12. [DOI: 10.1016/j.fgb.2017.01.001] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Revised: 12/21/2016] [Accepted: 01/03/2017] [Indexed: 12/24/2022]
23
Sugar and Glycerol Transport in Saccharomyces cerevisiae. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2016;892:125-168. [PMID: 26721273 DOI: 10.1007/978-3-319-25304-6_6] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
24
Marcet-Houben M, Gabaldón T. Horizontal acquisition of toxic alkaloid synthesis in a clade of plant associated fungi. Fungal Genet Biol 2015;86:71-80. [PMID: 26688468 PMCID: PMC4712825 DOI: 10.1016/j.fgb.2015.12.006] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2015] [Revised: 12/03/2015] [Accepted: 12/09/2015] [Indexed: 01/06/2023]
25
Genomics and the making of yeast biodiversity. Curr Opin Genet Dev 2015;35:100-9. [PMID: 26649756 DOI: 10.1016/j.gde.2015.10.008] [Citation(s) in RCA: 85] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2015] [Revised: 10/28/2015] [Accepted: 10/29/2015] [Indexed: 12/22/2022]
26
A Novel Type Pathway-Specific Regulator and Dynamic Genome Environments of a Solanapyrone Biosynthesis Gene Cluster in the Fungus Ascochyta rabiei. EUKARYOTIC CELL 2015;14:1102-13. [PMID: 26342019 PMCID: PMC4621316 DOI: 10.1128/ec.00084-15] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2015] [Accepted: 08/31/2015] [Indexed: 01/07/2023]
27
Gonçalves C, Coelho MA, Salema-Oom M, Gonçalves P. Stepwise Functional Evolution in a Fungal Sugar Transporter Family. Mol Biol Evol 2015;33:352-66. [DOI: 10.1093/molbev/msv220] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
28
Nguyen M, Ekstrom A, Li X, Yin Y. HGT-Finder: A New Tool for Horizontal Gene Transfer Finding and Application to Aspergillus genomes. Toxins (Basel) 2015;7:4035-53. [PMID: 26473921 PMCID: PMC4626719 DOI: 10.3390/toxins7104035] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2015] [Revised: 09/22/2015] [Accepted: 09/23/2015] [Indexed: 11/16/2022]  Open
29
Ropars J, Rodríguez de la Vega RC, López-Villavicencio M, Gouzy J, Sallet E, Dumas É, Lacoste S, Debuchy R, Dupont J, Branca A, Giraud T. Adaptive Horizontal Gene Transfers between Multiple Cheese-Associated Fungi. Curr Biol 2015;25:2562-9. [PMID: 26412136 PMCID: PMC4598740 DOI: 10.1016/j.cub.2015.08.025] [Citation(s) in RCA: 89] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2015] [Revised: 07/09/2015] [Accepted: 08/11/2015] [Indexed: 11/29/2022]
30
Cabral S, Prista C, Loureiro-Dias MC, Leandro MJ. Occurrence of FFZ genes in yeasts and correlation with fructophilic behaviour. MICROBIOLOGY-SGM 2015;161:2008-2018. [PMID: 26253443 DOI: 10.1099/mic.0.000154] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
31
Solis-Escalante D, Kuijpers NGA, Barrajon-Simancas N, van den Broek M, Pronk JT, Daran JM, Daran-Lapujade P. A Minimal Set of Glycolytic Genes Reveals Strong Redundancies in Saccharomyces cerevisiae Central Metabolism. EUKARYOTIC CELL 2015;14:804-16. [PMID: 26071034 PMCID: PMC4519752 DOI: 10.1128/ec.00064-15] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/10/2015] [Accepted: 05/26/2015] [Indexed: 01/13/2023]
32
Marsit S, Mena A, Bigey F, Sauvage FX, Couloux A, Guy J, Legras JL, Barrio E, Dequin S, Galeote V. Evolutionary Advantage Conferred by an Eukaryote-to-Eukaryote Gene Transfer Event in Wine Yeasts. Mol Biol Evol 2015;32:1695-707. [PMID: 25750179 PMCID: PMC4476156 DOI: 10.1093/molbev/msv057] [Citation(s) in RCA: 105] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
33
Bruto M, Prigent-Combaret C, Luis P, Moënne-Loccoz Y, Muller D. Frequent, independent transfers of a catabolic gene from bacteria to contrasted filamentous eukaryotes. Proc Biol Sci 2015;281:20140848. [PMID: 24990676 DOI: 10.1098/rspb.2014.0848] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
34
Hull CM, Purdy NJ, Moody SC. Mitigation of human-pathogenic fungi that exhibit resistance to medical agents: can clinical antifungal stewardship help? Future Microbiol 2015;9:307-25. [PMID: 24762306 DOI: 10.2217/fmb.13.160] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
35
Sloothaak J, Odoni DI, de Graaff LH, Martins dos Santos VAP, Schaap PJ, Tamayo-Ramos JA. Aspergillus niger membrane-associated proteome analysis for the identification of glucose transporters. BIOTECHNOLOGY FOR BIOFUELS 2015;8:150. [PMID: 26388937 PMCID: PMC4574540 DOI: 10.1186/s13068-015-0317-9] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2015] [Accepted: 08/18/2015] [Indexed: 05/07/2023]
36
Widespread horizontal transfer of the cerato-ulmin gene between Ophiostoma novo-ulmi and Geosmithia species. Fungal Biol 2014;118:663-74. [DOI: 10.1016/j.funbio.2014.04.007] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2013] [Revised: 04/02/2014] [Accepted: 04/13/2014] [Indexed: 01/23/2023]
37
Soanes D, Richards TA. Horizontal gene transfer in eukaryotic plant pathogens. ANNUAL REVIEW OF PHYTOPATHOLOGY 2014;52:583-614. [PMID: 25090479 DOI: 10.1146/annurev-phyto-102313-050127] [Citation(s) in RCA: 106] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
38
Schönknecht G, Weber APM, Lercher MJ. Horizontal gene acquisitions by eukaryotes as drivers of adaptive evolution. Bioessays 2013;36:9-20. [DOI: 10.1002/bies.201300095] [Citation(s) in RCA: 106] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
39
Richards TA, Talbot NJ. Horizontal gene transfer in osmotrophs: playing with public goods. Nat Rev Microbiol 2013;11:720-7. [DOI: 10.1038/nrmicro3108] [Citation(s) in RCA: 69] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
PrevPage 1 of 1 1Next
© 2004-2025 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA